isoform	chrom	strand	length	exons	structural_category	associated_gene	associated_transcript	ref_length	ref_exons	diff_to_TSS	diff_to_TTS	diff_to_gene_TSS	diff_to_gene_TTS	subcategory	RTS_stage	all_canonical	min_sample_cov	min_cov	min_cov_pos	sd_cov	FL	n_indels	n_indels_junc	bite	iso_exp	gene_exp	ratio_exp	FSM_class	coding	ORF_length	CDS_length	CDS_start	CDS_end	CDS_genomic_start	CDS_genomic_end	predicted_NMD	perc_A_downstream_TTS	seq_A_downstream_TTS	dist_to_cage_peak	within_cage_peak	pos_cage_peak	dist_to_polya_site	within_polya_site	polyA_motif	polyA_dist	ORF_seq	TSS_genomic_coord	TTS_genomic_coord	experiment_id	entry_id	LRGASP_id
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000014	chr1	-	1202	5	FSM	ENSMUSG00000033845.14	ENSMUST00000156816.7	4203	5	-21	3022	-21	144	multi-exon	FALSE	canonical	3	2059	junction_1	113.670576667843	6435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAAATTACCTTTCTTTT	1599	False	NA	NA	False	ATTAAA	-15	NA	4855983	4846455	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_4847025_4847747_4847872_4852790_4852957_4854173_4854329_4855795
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000046	chr1	-	1389	4	FSM	ENSMUSG00000033845.14	ENSMUST00000146665.3	1569	4	12	168	12	-168	multi-exon	FALSE	canonical	3	20	junction_1	1077.56031024821	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGTTCACTCTAGCTGT	1632	False	NA	-1	True	AATAAA	-25	NA	4855950	4851611	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_4852525_4852790_4852957_4854173_4854329_4855795
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000079	chr1	+	1890	4	NNC	ENSMUSG00000033813.16	novel	2854	10	NA	NA	33919	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	823.916392737893	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTTTTGTCTTTTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	4962179	4968132	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_4962293_4963639_4963791_4965156_4965229_4966578
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000089	chr1	+	1870	13	FSM	ENSMUSG00000033793.13	ENSMUST00000192698.3	1811	13	-30	-29	0	29	multi-exon	FALSE	canonical	3	60	junction_6	140.296783640966	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTCTTAAATTTTGCTT	NA	False	NA	17	True	ATTAAA	-17	NA	5153346	5232671	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000125	chr1	+	1065	1	FSM	ENSMUSG00000061024.9	ENSMUST00000072079.9	2048	1	986	-3	986	3	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTATTTTTGTAAGT	NA	False	NA	22	True	AATAAA	-22	NA	9616618	9617683	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_9616600_9617700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000191	chr1	-	486	4	NNC	ENSMUSG00000098234.8	novel	473	4	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	295.388256743937	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGGGCAGTAATTTC	NA	False	NA	-13	True	AATAAA	-14	NA	10014344	10012247	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_10012381_10012547_10012617_10012834_10012943_10014168
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000199	chr1	-	576	3	FSM	ENSMUSG00000098234.8	ENSMUST00000182498.8	559	3	-15	-2	0	0	multi-exon	FALSE	canonical	3	370	junction_2	159	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGGGCAGTAATTTC	NA	False	NA	-13	True	AATAAA	-14	NA	10014343	10012247	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_10012617_10012834_10012943_10014244
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000202	chr1	-	2096	1	FSM	ENSMUSG00000093178.3	ENSMUST00000175437.3	87	1	-1569	-440	-1569	440	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGGGCAGTAATTTC	NA	False	NA	-13	True	AATAAA	-14	NA	10014343	10012247	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_10012200_10014300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000218	chr1	-	468	1	Genic_Genomic	ENSMUSG00000025917.10	novel	NA	NA	NA	NA	10062	2	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGACTGGCCTGAGTCT	NA	False	NA	1	True	AGTAAA	-42	NA	10095291	10094823	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr1_-_10094800_10095300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000228	chr1	-	1221	8	NNC	ENSMUSG00000025917.10	novel	1698	8	NA	NA	0	13	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	347.390622927504	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCCTTCTGTGGTTTTGT	NA	False	NA	-12	True	AATAAA	-15	NA	10108170	10095054	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105323_10107894
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000229	chr1	-	1291	8	NNC	ENSMUSG00000025917.10	novel	1698	8	NA	NA	0	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	344.060092046107	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCCTTCTGTGGTTTTGT	NA	False	NA	-12	True	AATAAA	-15	NA	10108170	10095054	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104228_10104362_10105153_10105389_10107894
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000241	chr1	+	1288	1	NIC	ENSMUSG00000056763.17	novel	4355	30	NA	NA	-4493	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGGATCTTGATGGTG	NA	False	NA	NA	False	ATTAAA	-35	NA	10136914	10138202	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_10136900_10138200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000254	chr1	-	696	3	Intergenic	novelGene_1	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	59	junction_2	5.5	143	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGAAGCTTCCTTCTGC	NA	False	NA	NA	False	NA	NA	NA	11465808	11456070	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr1_-_11456468_11457012_11457110_11465606
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000272	chr1	+	181	1	Intergenic	novelGene_2	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTTAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	13122109	13122290	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr1_+_13122100_13122300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000300	chr1	+	272	1	Intergenic	novelGene_3	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCCTTGGTCCTGGTGTC	NA	False	NA	NA	False	NA	NA	NA	13667045	13667317	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr1_+_13667000_13667300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000328	chr1	-	153	1	ISM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	33642	3422	11507	3243	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGATACTTGTAATCCG	NA	False	NA	-5	True	ATTAAA	-20	NA	13697128	13696975	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_13697000_13697100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000351	chr1	+	333	1	FSM	ENSMUSG00000082193.2	ENSMUST00000121367.2	894	1	647	-86	647	86	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGGAACATATACTCGGA	NA	False	NA	NA	False	NA	NA	NA	14935942	14936275	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_14935900_14936300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000360	chr1	+	1651	10	NNC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	0	-39	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	322.631005069412	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGTTTGTTCTATTCCAT	NA	False	NA	12	True	ATTAAA	-17	NA	15875869	15913655	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889992_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000363	chr1	+	1643	10	NNC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	0	-39	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	325.647048197892	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGTTTGTTCTATTCCAT	NA	False	NA	12	True	ATTAAA	-17	NA	15875869	15913655	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889878_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000395	chr1	-	899	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2409.49375157706	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGAGTCTTTGTTGG	NA	False	NA	-5	True	AATAAA	-25	NA	16174627	16171518	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_16171584_16171950_16172156_16172713_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174588
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000397	chr1	-	886	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2500.70481731318	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGAGTCTTTGTTGG	NA	False	NA	-5	True	AATAAA	-25	NA	16174629	16171518	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_16171584_16171950_16172161_16172713_16172804_16172915_16173054_16173391_16173559_16173733_16173909_16174588
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000398	chr1	-	945	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	2412.63137235859	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGAGTCTTTGTTGG	NA	False	NA	-5	True	AATAAA	-25	NA	16174630	16171518	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173597_16173733_16173909_16174588
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000402	chr1	-	891	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2535.91209210589	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGAGTCTTTGTTGG	NA	False	NA	-5	True	AATAAA	-25	NA	16174627	16171518	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173559_16173733_16173896_16174588
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000403	chr1	-	871	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2535.91209210589	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGAGTCTTTGTTGG	NA	False	NA	-5	True	AATAAA	-25	NA	16174626	16171518	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173559_16173733_16173877_16174588
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000404	chr1	-	899	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2415.49321510581	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGAGTCTTTGTTGG	NA	False	NA	-5	True	AATAAA	-25	NA	16174627	16171518	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173550_16173729_16173909_16174588
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000409	chr1	-	888	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2415.49321510581	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGAGTCTTTGTTGG	NA	False	NA	-5	True	AATAAA	-25	NA	16174627	16171518	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173559_16173749_16173909_16174588
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000410	chr1	-	881	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2500.70481731318	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGAGTCTTTGTTGG	NA	False	NA	-5	True	AATAAA	-25	NA	16174627	16171518	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_16171584_16171950_16172161_16172713_16172824_16172938_16173054_16173391_16173559_16173733_16173909_16174588
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000413	chr1	-	899	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2409.49375157706	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGAGTCTTTGTTGG	NA	False	NA	-5	True	AATAAA	-25	NA	16174630	16171518	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_16171584_16171950_16172161_16172721_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174588
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000428	chr1	-	904	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2500.70481731318	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGAGTCTTTGTTGG	NA	False	NA	-5	True	AATAAA	-25	NA	16174627	16171518	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_16171584_16171950_16172161_16172713_16172804_16172895_16173054_16173391_16173559_16173733_16173909_16174588
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000430	chr1	-	883	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2415.49321510581	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGAGTCTTTGTTGG	NA	False	NA	-5	True	AATAAA	-25	NA	16174627	16171518	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173538_16173733_16173909_16174588
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000431	chr1	-	908	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2482.96572782541	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGAGTCTTTGTTGG	NA	False	NA	-5	True	AATAAA	-25	NA	16174627	16171518	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173387_16173559_16173733_16173909_16174588
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000441	chr1	-	804	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2482.96572782541	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGAGTCTTTGTTGG	NA	False	NA	-5	True	AATAAA	-25	NA	16174626	16171518	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173490_16173559_16173733_16173909_16174588
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000537	chr1	-	1036	4	NIC	ENSMUSG00000025920.20	novel	1151	5	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	38.8529993122224	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGTTTGTTGTTTATT	NA	False	NA	NA	False	NA	NA	NA	16589501	16529939	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_-_16530644_16533258_16533419_16579565_16579633_16589396
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000556	chr1	-	1151	1	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	14115	-351	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGGACATTTTTATTT	4307	False	NA	NA	False	AATACA	-32	NA	16641507	16640356	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_-_16640400_16641500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000568	chr1	-	1006	4	NNC	ENSMUSG00000079658.10	novel	2014	4	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	979.968366836399	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTTTTGTTTATTGC	NA	False	NA	0	True	TATAAA	-22	NA	16727141	16712988	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_16713698_16715905_16716054_16718178_16718232_16727045
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000579	chr1	-	717	1	NIC	ENSMUSG00000079658.10	novel	2014	4	NA	NA	4558	2	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTTTTGTTTATTGC	NA	False	NA	0	True	TATAAA	-22	NA	16713705	16712988	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_-_16713000_16713700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000587	chr1	-	487	4	NNC	ENSMUSG00000079658.10	novel	960	4	NA	NA	0	-53	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	981.83003733957	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGTAGTTCAGTTAGTA	NA	False	NA	-1	True	AATAAA	-40	NA	16727266	16713467	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_16713703_16715905_16716054_16718178_16718232_16727215
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000603	chr1	-	322	3	NIC	ENSMUSG00000079658.10	novel	960	4	NA	NA	0	-70	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	513	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCAGTATTTAATAC	NA	False	NA	-18	True	AATAAA	-23	NA	16727266	16713484	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_-_16713703_16718178_16718232_16727215
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000621	chr1	+	1740	3	FSM	ENSMUSG00000025940.7	ENSMUST00000065373.6	1710	3	-28	-2	-25	2	multi-exon	FALSE	canonical	3	512	junction_1	10.5	572	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTTTTGTTTGCCTCCA	NA	False	NA	24	True	ATTAAA	-14	NA	16735405	16748501	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_16735730_16737891_16737998_16747191
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000654	chr1	+	2220	11	FSM	ENSMUSG00000041809.6	ENSMUST00000038447.6	2146	11	-74	0	-12	0	multi-exon	FALSE	canonical	3	9	junction_5	4.06939798987516	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGTGCCTTATTTGGAG	NA	False	NA	12	True	NA	NA	NA	21021837	21061065	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_21022021_21025558_21025781_21030353_21030642_21031376_21031527_21037547_21037741_21042998_21043220_21045122_21045264_21048866_21049081_21049633_21049782_21059591_21059827_21060840
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000664	chr1	-	956	2	Intergenic	novelGene_4	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTTCCCTCTTCTAT	NA	False	NA	NA	False	AATAAA	-18	NA	21263525	21259269	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr1_-_21260108_21263407
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000683	chr1	-	549	3	NNC	ENSMUSG00000099343.2	novel	633	2	NA	NA	17209	-167	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	34.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTACTCTTTCTTATTG	1130	False	NA	NA	False	AATAGA	-39	NA	21324608	21320749	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_21321037_21323622_21323669_21324392
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000736	chr1	-	254	3	ISM	ENSMUSG00000026155.14	ENSMUST00000133398.2	1271	7	43	27579	43	-27579	5prime_fragment	FALSE	canonical	3	448	junction_1	26	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAAAACCTTCATCTT	NA	False	NA	NA	False	GATAAA	-22	NA	23931032	23915454	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_23915531_23916789_23916876_23930940
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000739	chr1	-	1541	3	FSM	ENSMUSG00000026154.5	ENSMUST00000027338.4	683	3	-21	-837	-21	837	multi-exon	FALSE	canonical	3	315	junction_1	0.5	1202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTTCTAGTACATGTTT	NA	False	NA	NA	False	NA	NA	NA	24044758	24034182	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_24035442_24042237_24042388_24044626
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000754	chr1	-	380	1	FSM	ENSMUSG00000101939.2	ENSMUST00000188299.2	345	1	-31	-4	-31	4	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGTAATTAGTTTAAAAAAA	NA	False	NA	NA	False	AGTAAA	-1	NA	24652231	24651851	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_24651900_24652200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000780	chr1	-	665	3	FSM	ENSMUSG00000086727.9	ENSMUST00000135245.3	889	3	7	217	7	-217	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTATTTTCTTGTAAAGA	NA	False	NA	NA	False	AATAAA	-23	NA	31261758	31242228	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_31242470_31243332_31243555_31261556
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000795	chr1	-	1414	10	NNC	ENSMUSG00000026134.12	novel	1975	14	NA	NA	-14719	2	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_9	88.3062851670253	86	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCAAGTGGGAGTCTT	2947	False	NA	0	True	AATAAA	-20	NA	33677124	33492888	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418_33669515_33677047
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000832	chr1	-	2246	6	ISM	ENSMUSG00000042197.14	ENSMUST00000139143.8	3578	13	37061	0	6613	0	3prime_fragment	FALSE	canonical	3	264	junction_2	25.1284699096463	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAGGAAATTTTTTCTA	NA	False	NA	-2	True	AATAAA	-17	NA	33816405	33800625	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000846	chr1	+	213	2	Intergenic	novelGene_5	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTTTTTAATATTTAT	217	False	NA	NA	False	NA	NA	NA	34068802	34129733	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr1_+_34068916_34129633
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000854	chr1	-	1721	5	FSM	ENSMUSG00000042111.10	ENSMUST00000042493.10	1705	5	-16	0	-16	0	multi-exon	FALSE	canonical	3	256	junction_1	5.33853912601566	277	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCTCTCATTTTATTTT	7188	False	NA	1	True	AATAAA	-23	NA	34478769	34475750	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_34476692_34476807_34476940_34477930_34478014_34478123_34478228_34478308
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000858	chr1	+	1831	9	FSM	ENSMUSG00000026127.14	ENSMUST00000027303.14	5836	9	-358	4363	-358	479	multi-exon	FALSE	canonical	3	439	junction_1	56.5552826887109	658	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTTGTTTGTTTTGTGA	5255	False	NA	49	True	NA	NA	NA	34478573	34484074	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34483438
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000892	chr1	+	3307	8	FSM	ENSMUSG00000026123.12	ENSMUST00000027297.11	3279	8	-28	0	-12	0	multi-exon	FALSE	canonical	3	235	junction_4	21.365621823817	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTCTCATTGTGACTTC	NA	False	NA	18	True	ATTAAA	-18	NA	34889044	34918661	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_34889145_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000909	chr1	+	2496	1	FSM	ENSMUSG00000045216.8	ENSMUST00000194670.2	3291	1	2261	-1466	2261	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGCTGTGGTCTGTGG	NA	False	NA	20	True	AATAAA	-15	NA	36143031	36145527	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_36143000_36145500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000914	chr1	-	160	1	ISM	ENSMUSG00000037470.15	ENSMUST00000046875.14	9033	41	100664	3455	6883	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTTTTCTTCTTAC	NA	False	NA	-1	True	NA	NA	NA	36182722	36182562	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_36182600_36182700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000922	chr1	-	1093	8	NIC	ENSMUSG00000001143.14	novel	705	6	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	59.6068753738756	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGAGTTTCTACTCCCTG	NA	False	NA	1	True	AATAAA	-18	NA	36484339	36458949	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_-_36459117_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000928	chr1	-	493	1	ISM	ENSMUSG00000001143.14	ENSMUST00000125304.8	3378	8	21596	1118	4691	3	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGCTCAGTGGCCTTC	NA	False	NA	0	True	CATAAA	-24	NA	36462756	36462263	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_36462300_36462800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000930	chr1	-	2246	8	FSM	ENSMUSG00000001143.14	ENSMUST00000125304.8	3378	8	14	1118	0	3	multi-exon	FALSE	canonical	3	121	junction_1	29.2707278728098	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGCTCAGTGGCCTTC	NA	False	NA	0	True	CATAAA	-24	NA	36484338	36462263	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000934	chr1	-	2207	8	NIC	ENSMUSG00000001143.14	novel	3378	8	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	65.1654096299939	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGAGTTCTGGCTCAGT	NA	False	NA	-7	True	CATAAA	-17	NA	36484335	36462270	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482600_36482691_36484130
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000949	chr1	-	298	1	ISM	ENSMUSG00000026121.14	ENSMUST00000191677.6	3779	15	9399	14	3944	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGCCACACAGATATTTT	5295	False	NA	NA	False	AATAAA	-21	NA	36588031	36587733	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_36587700_36588000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000000985	chr1	+	479	4	NNC	ENSMUSG00000061518.12	novel	865	4	NA	NA	-39	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3424.44607037239	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTAGTCTTATGTCTA	NA	False	NA	25	True	AATAAA	-30	NA	36730651	36732469	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_36730771_36731291_36731366_36731531_36731632_36732283
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001003	chr1	-	1362	4	ISM	ENSMUSG00000026116.12	ENSMUST00000027290.12	6546	41	144327	6	15336	-3	3prime_fragment	FALSE	canonical	3	291	junction_2	56.5115524079418	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGAATTGTTTTGTTTT	NA	False	NA	-4	True	AATAAA	-19	NA	36834281	36831277	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001022	chr1	+	561	4	NNC	ENSMUSG00000050122.20	novel	462	3	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.0485374896143	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCAGATTTCTCCCTCA	NA	False	NA	5	True	AATAAA	-22	NA	37174612	37180417	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_37174647_37176810_37176969_37179243_37179367_37180171
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001048	chr1	+	1062	6	NNC	ENSMUSG00000026111.16	novel	1094	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	197.853076801954	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGTTTATTTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	37469251	37478068	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_37469364_37470373_37470655_37471631_37471753_37476242_37476383_37476457_37476560_37477762
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001053	chr1	+	1052	6	NNC	ENSMUSG00000026111.16	novel	1094	6	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	191.249156860887	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGTTTATTTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	37469261	37478068	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_37469364_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476557_37477762
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001061	chr1	+	1200	6	FSM	ENSMUSG00000026111.16	ENSMUST00000118059.3	1179	6	-21	0	4	0	multi-exon	FALSE	canonical	2	11	junction_1	196.480635178126	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGTTTATTTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	37469261	37478068	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_37469509_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001069	chr1	+	1263	6	NNC	ENSMUSG00000026111.16	novel	1414	6	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	213.801216086345	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGTTTATTTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	37469261	37478068	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_37469575_37470373_37470658_37471631_37471750_37476242_37476383_37476457_37476560_37477762
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001095	chr1	-	296	1	Genic_Genomic	ENSMUSG00000026088.16	novel	NA	NA	NA	NA	936	1	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGATCCACTCACCTGT	NA	False	NA	1	True	AATAAA	-20	NA	37918263	37917967	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr1_-_37918000_37918300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001232	chr1	+	1095	5	FSM	ENSMUSG00000073702.12	ENSMUST00000178079.8	487	5	-61	-547	-10	0	multi-exon	FALSE	canonical	3	1086	junction_1	4596.75456164455	3436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGGTTTGAACATGTTT	NA	False	NA	10	True	ATTAAA	-23	NA	39406948	39410992	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_39407088_39407229_39407337_39409094_39409221_39410034_39410148_39410382
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001258	chr1	+	640	5	NNC	ENSMUSG00000073702.12	novel	1049	5	NA	NA	-18	128	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	5012.72253246676	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCACAGAAGTCACTTTA	NA	False	NA	21	True	NA	NA	NA	39406991	39410575	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_39407093_39407229_39407337_39409094_39409221_39410034_39410148_39410382
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001327	chr1	+	1484	12	NNC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	265.216892373016	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCCCTTTTTTTTTAAAC	NA	False	NA	15	True	AATAAA	-17	NA	42890435	42944843	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42927014_42927123_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001373	chr1	+	324	1	Genic_Genomic	ENSMUSG00000041763.15	novel	NA	NA	NA	NA	1859	7	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTCTTAATTTTTCATAA	NA	False	NA	15	True	AATAAA	-25	NA	44041843	44042167	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr1_+_44041800_44042200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001386	chr1	-	1198	7	FSM	ENSMUSG00000026049.12	ENSMUST00000133677.8	935	7	-16	-247	-1	0	multi-exon	FALSE	canonical	3	15	junction_5	163.292596960861	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTTGTTTTACTCT	NA	False	NA	0	True	ATTAAA	-20	NA	44141599	44125772	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139096_44141059_44141118_44141487
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001418	chr1	-	527	1	FSM	ENSMUSG00000101567.2	ENSMUST00000186385.2	309	1	-60	-158	-60	158	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATACAGGTGTGAAAGGT	NA	False	NA	NA	False	AATAAA	-26	NA	44503451	44502924	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_44502900_44503500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001433	chr1	-	490	1	FSM	ENSMUSG00000084817.4	ENSMUST00000153604.2	423	1	98	-165	98	165	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAATGCAAAAAGTGGCAAA	NA	False	NA	NA	False	AATAAA	-41	NA	45896816	45896326	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_45896300_45896800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001449	chr1	+	201	1	Intergenic	novelGene_6	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCATGAAATGCTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	46922011	46922212	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr1_+_46922000_46922200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001453	chr1	-	2291	6	FSM	ENSMUSG00000026107.12	ENSMUST00000188204.7	972	6	0	-1319	0	0	multi-exon	FALSE	canonical	2	4	junction_5	20.9227149289952	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATAGGAGTAACAGAACT	NA	False	NA	-1	True	AATAAA	-32	NA	51517558	51508646	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_51510571_51511487_51511540_51512164_51512241_51513692_51513765_51516636_51516776_51517530
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001471	chr1	+	1259	2	Antisense	novelGene_ENSMUSG00000078291.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCATCCTTTTGTCTTAG	NA	False	NA	NA	False	NA	NA	NA	51979824	52130231	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr1_+_51980494_52129641
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001500	chr1	-	811	9	FSM	ENSMUSG00000060715.10	ENSMUST00000072235.10	646	9	19	-184	-9	184	multi-exon	FALSE	canonical	3	34	junction_2	9.08209089362136	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGGTGCCCTTGGTTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	53226776	53197551	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_53197948_53202384_53202405_53209396_53209420_53209546_53209618_53216928_53216987_53221001_53221055_53221653_53221704_53224373_53224450_53226712
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001510	chr1	-	561	7	NNC	ENSMUSG00000060715.10	novel	726	10	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.8634225539194	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTAGAACAGAATGGAATT	NA	False	NA	NA	False	AATAAA	-24	NA	53226767	53197739	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_53197948_53202384_53202451_53209546_53209618_53216928_53216987_53221001_53221055_53221653_53221704_53226712
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001524	chr1	-	3051	13	FSM	ENSMUSG00000026098.14	ENSMUST00000027267.14	3054	13	3	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	15.4495145554804	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTCACGTCCAACC	6055	False	NA	NA	False	AATAAA	-18	NA	53336174	53228345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53336044
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001536	chr1	+	1292	7	NIC	ENSMUSG00000026096.15	novel	1868	8	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	47.461387815079	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCGTGTTTCAAGTGTTTT	NA	False	NA	19	True	AATAAA	-39	NA	53352802	53365334	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_53353018_53354014_53354259_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001586	chr1	-	470	1	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	39989	1854	3623	-1850	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGTTTTTTGAAT	827	False	NA	0	True	AATAAA	-22	NA	55026651	55026181	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_55026200_55026700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001598	chr1	+	1707	5	FSM	ENSMUSG00000025981.14	ENSMUST00000027125.7	1733	5	26	0	26	0	multi-exon	FALSE	canonical	3	135	junction_4	22.7486263321547	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGTTATTTAAATCTTT	3585	False	NA	22	True	AATAAA	-28	NA	55091954	55111861	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_55092150_55100433_55100584_55103339_55103533_55106655_55106758_55110794
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001705	chr1	+	902	7	FSM	ENSMUSG00000025979.14	ENSMUST00000159311.8	1816	7	52	862	1	77	multi-exon	FALSE	canonical	3	33	junction_1	175.833886255055	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGCTAAACAATCATTGG	NA	False	NA	13	True	AATAAA	-21	NA	55170441	55192235	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_55170519_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001708	chr1	+	919	7	NIC	ENSMUSG00000025979.14	novel	2840	8	NA	NA	-1	77	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	185.331609704215	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGCTAAACAATCATTGG	NA	False	NA	13	True	AATAAA	-21	NA	55170444	55192235	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_55170519_55175835_55175899_55184282_55184384_55187706_55187794_55189304_55189385_55190129_55190242_55191833
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001715	chr1	-	454	2	NNC	ENSMUSG00000025978.15	novel	1870	8	NA	NA	29427	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTACTACTATCTTCA	NA	False	NA	NA	False	ATTAAA	-20	NA	55216221	55210905	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_55211242_55216103
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001727	chr1	+	568	1	FSM	ENSMUSG00000100215.2	ENSMUST00000162574.2	396	1	-35	-137	-35	137	mono-exon	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGTCATGCCTGATACT	NA	False	NA	NA	False	NA	NA	NA	55374524	55375092	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_55374500_55375100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001744	chr1	-	472	1	ISM	ENSMUSG00000048495.17	ENSMUST00000162686.8	1847	8	18384	9	2054	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAAGTCTATTGGTGGAG	NA	False	NA	-24	True	AATAAA	-37	NA	57427876	57427404	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_57427400_57427900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001783	chr1	-	214	1	Intergenic	novelGene_7	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGAATCCAGTGGTATTC	NA	False	NA	NA	False	NA	NA	NA	58189417	58189203	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr1_-_58189200_58189400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001795	chr1	-	1504	11	FSM	ENSMUSG00000026034.18	ENSMUST00000151338.8	1538	11	44	-10	44	10	multi-exon	FALSE	canonical	3	9	junction_6	69.2961759406679	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTGGTGTACGGTCTTT	NA	False	NA	-2	True	AATAAA	-30	NA	58463181	58451148	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456425_58456543_58458825_58458893_58460241_58460468_58460932_58461094_58463078
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001806	chr1	-	906	7	FSM	ENSMUSG00000026035.16	ENSMUST00000081677.12	896	7	-7	-3	-7	0	multi-exon	FALSE	canonical	3	28	junction_6	63.3151289626386	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGTCCTTTTTTTTA	NA	False	NA	1	True	AATAGA	-28	NA	58484652	58470152	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484490
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001808	chr1	-	1085	7	FSM	ENSMUSG00000026035.16	ENSMUST00000114348.8	1033	7	-52	0	0	0	multi-exon	FALSE	canonical	3	104	junction_6	35.853482707015	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGTCCTTTTTTTTA	NA	False	NA	1	True	AATAGA	-28	NA	58484645	58470152	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484304
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001849	chr1	+	178	1	ISM	ENSMUSG00000026036.18	ENSMUST00000087521.13	3769	7	16950	1178	4416	12	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTATTTCTCTATGAAG	NA	False	NA	25	True	NA	NA	NA	58501259	58501437	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_+_58501300_58501400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001874	chr1	+	317	1	NIC	ENSMUSG00000026032.9	novel	763	3	NA	NA	9264	0	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCCCTCTAACCTCA	NA	False	NA	52	True	AATAAA	-20	NA	58634806	58635123	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_58634800_58635100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001877	chr1	+	1741	1	FSM	ENSMUSG00000059647.6	ENSMUST00000081455.6	552	1	-94	-1095	-94	1095	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGACGCAGTCCTGGTG	NA	False	NA	NA	False	AATAAA	-34	NA	58685752	58687493	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_58685800_58687500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001899	chr1	-	748	1	Genic_Genomic	ENSMUSG00000079550.10_ENSMUSG00000026024.15	novel	NA	NA	NA	NA	-280	4	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTATGACTGTGGAAGAAA	NA	False	NA	6	True	AATAAA	-24	NA	59202828	59202080	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr1_-_59202100_59202800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001906	chr1	+	369	1	FSM	ENSMUSG00000041075.9	ENSMUST00000114246.4	4532	1	4167	-4	4167	4	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATGTTTATTTACTCTT	9521	False	NA	NA	False	AATAAA	-19	NA	59525749	59526118	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_59525700_59526100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001913	chr1	-	833	1	ISM	ENSMUSG00000026021.16	ENSMUST00000091374.9	1215	5	30568	0	30473	0	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGCTCCTTTTATTTTA	5391	False	NA	0	True	AATAAA	-21	NA	59679425	59678592	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_59678600_59679400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001920	chr1	-	1208	5	NNC	ENSMUSG00000026021.16	novel	1215	5	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1668.86628808302	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGCTCCTTTTATTTTA	600	False	NA	0	True	AATAAA	-21	NA	59709982	59678592	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_59679428_59681572_59681649_59683675_59683754_59694616_59694692_59709838
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001922	chr1	-	1199	5	NNC	ENSMUSG00000026021.16	novel	1215	5	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	162	junction_3	1398.18192217608	127	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGCTCCTTTTATTTTA	600	False	NA	0	True	AATAAA	-21	NA	59709982	59678592	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_59679428_59681576_59681649_59683675_59683749_59694616_59694692_59709838
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001973	chr1	+	240	1	ISM	ENSMUSG00000026020.10	ENSMUST00000027174.10	1713	13	26294	0	6562	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTTTGTGATCTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	59750429	59750669	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_+_59750400_59750700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001993	chr1	-	1411	13	NNC	ENSMUSG00000026019.16	novel	10012	13	NA	NA	28	-1275	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_8	265.157539650173	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGTTGGGTCTTGTC	NA	False	NA	-22	True	AATGAA	-15	NA	60136828	60117301	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126356_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000001997	chr1	-	1631	14	NIC	ENSMUSG00000026019.16	novel	2850	14	NA	NA	-1	-1275	combination_of_known_junctions	FALSE	canonical	3	21	junction_13	254.854593651606	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGTTGGGTCTTGTC	NA	False	NA	-22	True	AATGAA	-15	NA	60137306	60117301	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137148
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002018	chr1	+	1825	1	FSM	ENSMUSG00000101188.2	ENSMUST00000122226.2	1218	1	-33	-574	-33	574	mono-exon	FALSE	NA	NA	NA	NA	NA	4548	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTGCTTAGATGGCTA	NA	False	NA	125	True	NA	NA	NA	60743057	60744882	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_60743100_60744900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002069	chr1	+	814	6	NNC	ENSMUSG00000025967.17	novel	1939	6	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1304.21771188709	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCTCTTCATTTTGC	NA	False	NA	30	True	AATAAA	-15	NA	63216284	63218815	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_63216451_63216912_63217042_63217597_63217725_63217990_63218058_63218406_63218533_63218616
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002071	chr1	+	799	6	NNC	ENSMUSG00000025967.17	novel	1939	6	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1294.18354185177	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCTCTTCATTTTGC	NA	False	NA	30	True	AATAAA	-15	NA	63216284	63218815	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_63216451_63216912_63217036_63217597_63217725_63217990_63218058_63218415_63218533_63218616
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002072	chr1	+	685	5	FSM	ENSMUSG00000025967.17	ENSMUST00000188524.2	681	5	-4	0	-3	0	multi-exon	FALSE	canonical	1	5	junction_1	1438.5358876302	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCTCTTCATTTTGC	NA	False	NA	30	True	AATAAA	-15	NA	63216284	63218815	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_63216451_63217597_63217725_63217990_63218058_63218406_63218533_63218616
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002077	chr1	+	803	6	NNC	ENSMUSG00000025967.17	novel	1939	6	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1304.21771188709	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCTCTTCATTTTGC	NA	False	NA	30	True	AATAAA	-15	NA	63216284	63218815	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_63216451_63216912_63217042_63217608_63217725_63217990_63218058_63218406_63218533_63218616
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002086	chr1	+	796	6	NNC	ENSMUSG00000025967.17	novel	1939	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1246.22155333632	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCTCTTCATTTTGC	NA	False	NA	30	True	AATAAA	-15	NA	63216287	63218815	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_63216451_63216912_63217036_63217597_63217725_63217999_63218058_63218406_63218533_63218616
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002087	chr1	+	785	6	NNC	ENSMUSG00000025967.17	novel	1939	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1313.24903959607	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCTCTTCATTTTGC	NA	False	NA	30	True	AATAAA	-15	NA	63216287	63218815	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_63216451_63216932_63217036_63217597_63217725_63217990_63218058_63218406_63218533_63218616
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002089	chr1	+	800	6	NNC	ENSMUSG00000025967.17	novel	1939	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1246.22155333632	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCTCTTCATTTTGC	NA	False	NA	30	True	AATAAA	-15	NA	63216287	63218815	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_63216451_63216912_63217036_63217597_63217725_63217995_63218058_63218406_63218533_63218616
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002092	chr1	+	821	6	NIC	ENSMUSG00000025967.17	novel	1939	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	1301.44894636709	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCTCTTCATTTTGC	NA	False	NA	30	True	AATAAA	-15	NA	63216287	63218815	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_63216451_63216912_63217036_63217581_63217725_63217990_63218058_63218406_63218533_63218616
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002093	chr1	+	809	6	NNC	ENSMUSG00000025967.17	novel	1939	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1294.18354185177	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCTCTTCATTTTGC	NA	False	NA	30	True	AATAAA	-15	NA	63216287	63218815	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_63216451_63216912_63217036_63217597_63217725_63217990_63218062_63218406_63218533_63218616
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002094	chr1	+	795	6	NNC	ENSMUSG00000025967.17	novel	1939	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1304.21771188709	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCTCTTCATTTTGC	NA	False	NA	30	True	AATAAA	-15	NA	63216287	63218815	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_63216451_63216912_63217042_63217613_63217725_63217990_63218058_63218406_63218533_63218616
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002095	chr1	+	794	6	NNC	ENSMUSG00000025967.17	novel	1939	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1304.21771188709	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCTCTTCATTTTGC	NA	False	NA	30	True	AATAAA	-15	NA	63216287	63218815	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_63216451_63216912_63217036_63217608_63217725_63217990_63218058_63218406_63218533_63218616
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002097	chr1	+	792	6	NNC	ENSMUSG00000025967.17	novel	1939	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	1246.22155333632	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCTCTTCATTTTGC	NA	False	NA	30	True	AATAAA	-15	NA	63216287	63218815	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_63216451_63216912_63217036_63217597_63217725_63218003_63218058_63218406_63218533_63218616
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002098	chr1	+	809	6	NNC	ENSMUSG00000025967.17	novel	1939	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1303.22400223446	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCTCTTCATTTTGC	NA	False	NA	30	True	AATAAA	-15	NA	63216287	63218815	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_63216451_63216912_63217036_63217597_63217725_63217990_63218058_63218406_63218537_63218616
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002106	chr1	+	800	6	NNC	ENSMUSG00000025967.17	novel	1939	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1294.18354185177	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCTCTTCATTTTGC	NA	False	NA	30	True	AATAAA	-15	NA	63216287	63218815	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_63216451_63216912_63217036_63217597_63217725_63217990_63218062_63218415_63218533_63218616
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002130	chr1	+	789	6	NNC	ENSMUSG00000025967.17	novel	1939	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1303.22400223446	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCTCTTCATTTTGC	NA	False	NA	30	True	AATAAA	-15	NA	63216290	63218815	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_63216451_63216912_63217036_63217597_63217725_63217990_63218058_63218406_63218520_63218616
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002147	chr1	+	803	6	NNC	ENSMUSG00000025967.17	novel	1939	6	NA	NA	128	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	1311.26512956	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCTCTTCATTTTGC	NA	False	NA	30	True	AATAAA	-15	NA	63216509	63218815	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_63216671_63216912_63217036_63217597_63217725_63217990_63218058_63218406_63218533_63218616
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002175	chr1	-	752	2	FSM	ENSMUSG00000087213.3	ENSMUST00000150749.2	711	2	-24	-17	-24	17	multi-exon	FALSE	canonical	3	111	junction_1	0	944	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTCTCTGTCTTACT	7903	False	NA	1	True	AATAAA	-38	NA	64729842	64719012	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_64719545_64729622
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002233	chr1	-	883	4	NNC	ENSMUSG00000044816.11	novel	1156	8	NA	NA	12890	4	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	11.8977121983832	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATGTCAGCTCTTTCTG	9665	False	NA	NA	False	AATAAA	-15	NA	65149383	65144439	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_65144910_65148620_65148736_65148992_65149124_65149216
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002239	chr1	-	2255	9	FSM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	52	-5	52	5	multi-exon	FALSE	canonical	3	773	junction_5	91.7393556495793	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATGTGTTTTTATTTAA	NA	False	NA	-1	True	ATTAAA	-33	NA	65218288	65197769	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65218148
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002259	chr1	+	166	1	Genic_Genomic	ENSMUSG00000025949.17	novel	NA	NA	NA	NA	12500	26	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCAGTGTTCTTAGTTAT	997	False	NA	NA	False	GATAAA	-9	NA	65248418	65248584	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr1_+_65248400_65248600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002283	chr1	-	1197	2	Genic_Genomic	ENSMUSG00000094191.2_ENSMUSG00000082769.4	novel	495	1	NA	NA	-50	50	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGGGGGGGGGAAGAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	66988149	66888216	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr1_-_66888854_66987589
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002305	chr1	+	589	4	NNC	ENSMUSG00000053153.15	novel	3559	11	NA	NA	-3	-28410	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	2.35702260395516	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCTCTTAATTTATCA	NA	False	NA	NA	False	AATAAA	-23	NA	69866125	69884509	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_69866281_69882127_69882175_69883437_69883534_69884218
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002308	chr1	-	690	3	ISM	ENSMUSG00000026196.8	ENSMUST00000027393.8	5659	11	56404	2828	56404	-2828	3prime_fragment	FALSE	canonical	3	41	junction_2	2.5	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTCTTTTT	NA	False	NA	0	True	NA	NA	NA	71085901	71069484	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_71070012_71070517_71070616_71085836
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002310	chr1	-	548	4	ISM	ENSMUSG00000026196.8	ENSMUST00000027393.8	5659	11	179	47935	179	-47935	5prime_fragment	FALSE	canonical	3	27	junction_1	8.25967446224258	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAGAATTCAATAAAA	NA	False	NA	NA	False	NA	NA	NA	71142126	71114591	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_71114640_71127267_71127411_71128629_71128687_71141826
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002335	chr1	+	489	2	ISM	ENSMUSG00000073652.11	ENSMUST00000097699.3	826	3	479	-5	-19	5	3prime_fragment	FALSE	canonical	3	20	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCAGTAGTCATTCTTT	NA	False	NA	NA	False	AGTAAA	-33	NA	71692474	71696621	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_+_71692546_71696203
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002341	chr1	-	397	2	Intergenic	novelGene_8	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGCTCTCTCTCTTTTT	5068	False	NA	NA	False	AATAAA	-17	NA	71725979	71722558	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr1_-_71722857_71725880
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002362	chr1	-	1139	8	NNC	ENSMUSG00000026189.14	novel	1186	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	117.78170746022	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTTATCTTTTAAGGATT	NA	False	NA	-6	True	AATAAA	-19	NA	72323418	72298330	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_72298593_72301110_72301223_72306565_72306677_72309435_72309533_72314040_72314127_72315320_72315491_72316445_72316580_72323251
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002390	chr1	+	1238	2	FSM	ENSMUSG00000110712.2	ENSMUST00000212057.2	1238	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTCAAGAATCATTTCATG	NA	False	NA	NA	False	AATAAA	-21	NA	72680346	72682122	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_72681432_72681969
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002400	chr1	+	460	4	NNC	ENSMUSG00000046330.11	novel	558	4	NA	NA	-50	56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7606.40918348906	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTATTTTCGAAAGATG	NA	False	NA	33	True	ATTAAA	-20	NA	72750398	72752832	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_72750483_72750830_72750964_72751312_72751384_72752660
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002466	chr1	+	381	4	NNC	ENSMUSG00000046330.11	novel	558	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7606.40918348906	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTGCCTTGT	NA	False	NA	0	True	AATAAA	-17	NA	72750448	72752778	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_72750483_72750830_72750960_72751283_72751384_72752660
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002470	chr1	+	354	4	NNC	ENSMUSG00000046330.11	novel	558	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6435.52356499108	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTGCCTTGT	NA	False	NA	0	True	AATAAA	-17	NA	72750448	72752778	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_72750483_72750830_72750960_72751300_72751388_72752674
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002472	chr1	+	514	5	NNC	ENSMUSG00000046330.11	novel	558	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3964.09106858054	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTGCCTTGT	NA	False	NA	0	True	AATAAA	-17	NA	72750448	72752778	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_72750483_72750830_72750952_72751300_72751384_72752340_72752499_72752660
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002478	chr1	+	705	3	NIC	ENSMUSG00000046330.11	novel	558	4	NA	NA	0	2	intron_retention	FALSE	canonical	3	9164	junction_1	4733.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTGCCTTGT	NA	False	NA	0	True	AATAAA	-17	NA	72750448	72752778	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_72750483_72750830_72751384_72752660
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002543	chr1	+	793	3	NNC	ENSMUSG00000039323.19	novel	906	3	NA	NA	447	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1868.5	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTTACTTGAGTCT	NA	False	NA	19	True	AATAAA	-4	NA	72888304	72891634	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_72888479_72888722_72888864_72891156
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002547	chr1	+	783	3	NNC	ENSMUSG00000039323.19	novel	1307	4	NA	NA	453	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1695.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTCTTACTTGAGTC	NA	False	NA	18	True	AATAAA	-3	NA	72888310	72891633	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_72888472_72888722_72888868_72891156
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002570	chr1	+	1401	10	NNC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	13	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	741.807419020314	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGAATTTGTTGATTTT	7861	False	NA	14	True	AATAAA	-19	NA	74275688	74307368	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_74275770_74275976_74276059_74287260_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002588	chr1	-	375	1	ISM	ENSMUSG00000006299.14	ENSMUST00000006462.14	1817	11	4524	0	2928	0	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTGTGCATTTTGTG	NA	False	NA	1	True	AATAAA	-19	NA	74319373	74318998	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_74319000_74319400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002591	chr1	-	1818	11	FSM	ENSMUSG00000006299.14	ENSMUST00000006462.14	1817	11	-1	0	-1	0	multi-exon	FALSE	canonical	3	1233	junction_8	50.6802722960325	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTGTGCATTTTGTG	NA	False	NA	1	True	AATAAA	-19	NA	74323898	74318998	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002642	chr1	-	1594	12	ISM	ENSMUSG00000033364.14	ENSMUST00000191058.7	6011	20	-42	21862	-21	-21862	5prime_fragment	TRUE	canonical	3	147	junction_10	27.6103346323871	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTACTTAAGAAGGTTAAA	NA	False	NA	NA	False	ATTAAA	-32	NA	74544986	74510522	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002701	chr1	+	1111	10	NIC	ENSMUSG00000026197.13	novel	1206	10	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	47.0130005660373	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGAGTGCTGTTTCTTT	2023	False	NA	13	True	AGTAAA	-19	NA	75145280	75148270	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_75145352_75145474_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147980
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002738	chr1	+	1514	8	FSM	ENSMUSG00000026201.13	ENSMUST00000027401.11	2876	8	0	1362	0	2	multi-exon	FALSE	canonical	3	167	junction_4	30.7265756142723	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGGTCAATGTGTCT	NA	False	NA	11	True	AATAAA	-19	NA	75187481	75190888	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776_75189873_75190219_75190342_75190457
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002765	chr1	-	1332	4	NIC	ENSMUSG00000026202.14	novel	2840	4	NA	NA	-10	62	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	133.627176211361	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCCCCTTTGTAACTG	NA	False	NA	-15	True	AATAAA	-19	NA	75195897	75192193	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_-_75193093_75193470_75193620_75193855_75194079_75195836
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002780	chr1	+	1890	10	FSM	ENSMUSG00000026203.17	ENSMUST00000188290.7	1855	10	-33	-2	-11	0	multi-exon	FALSE	canonical	3	30	junction_9	6.24400947476761	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGTGGCCTGTGTTCCTC	2226	False	NA	6	True	AATAAA	-16	NA	75213097	75222336	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_75213234_75213495_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101_75220306_75221437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002805	chr1	+	1531	13	FSM	ENSMUSG00000033021.17	ENSMUST00000037796.14	1539	13	13	-5	0	0	multi-exon	FALSE	canonical	3	122	junction_1	48.5514475124641	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGACTCCTACTTGCGC	NA	False	NA	18	True	AATAAA	-22	NA	75412586	75419823	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_75412656_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002835	chr1	-	1800	17	FSM	ENSMUSG00000026245.17	ENSMUST00000189529.7	1801	17	1	0	1	0	multi-exon	FALSE	canonical	3	42	junction_15	338.950378927359	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTGCGTAGCTGCATTA	NA	False	NA	-2	True	AATAAA	-19	NA	78465498	78401721	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456651_78458944_78459001_78465421
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002840	chr1	-	264	1	NIC	ENSMUSG00000026245.17	novel	2036	18	NA	NA	63447	0	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTGCGTAGCTGCATTA	NA	False	NA	-2	True	AATAAA	-19	NA	78401985	78401721	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_-_78401700_78402000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002848	chr1	+	594	1	ISM	ENSMUSG00000032883.16	ENSMUST00000035779.15	3950	16	48569	756	9738	20	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCCTGACACTGTTGG	9905	False	NA	23	True	AATAAA	-34	NA	78684110	78684704	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_+_78684100_78684700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002886	chr1	-	332	1	ISM	ENSMUSG00000004364.15	ENSMUST00000163119.8	4709	16	73298	1928	9384	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCATTAAAATAAAATTGT	NA	False	NA	38	True	AATAAA	-19	NA	80244899	80244567	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_80244600_80244900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002893	chr1	+	1313	1	ISM	ENSMUSG00000026142.16	ENSMUST00000027322.14	3636	7	127602	0	105005	0	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTGCTCGAGTCA	NA	False	NA	14	True	AATAAA	-20	NA	82421774	82423087	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_+_82421800_82423100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002905	chr1	+	1714	8	FSM	ENSMUSG00000026150.15	ENSMUST00000073025.12	1706	8	-5	-3	-4	0	multi-exon	FALSE	canonical	3	146	junction_5	154.121870675152	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTCTATGGAAAGATT	NA	False	NA	13	True	AATAAA	-13	NA	82702634	82730111	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713136_82713229_82724803_82724864_82728240_82728326_82729305
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002928	chr1	-	894	5	ISM	ENSMUSG00000026219.15	ENSMUST00000187733.2	865	7	3509	-273	682	-40	3prime_fragment	FALSE	canonical	3	1142	junction_1	138.980214419175	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	NA	False	NA	-23	True	AATAAA	-19	NA	84705915	84702024	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002948	chr1	+	1191	5	NIC	ENSMUSG00000072109.12	novel	1248	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTGATCAAGTTCTGGT	NA	False	NA	NA	False	ATTAAA	-16	NA	85084354	85091495	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_85084412_85089529_85089681_85089912_85090033_85090171_85090307_85090767
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002949	chr1	+	1071	4	FSM	ENSMUSG00000072109.12	ENSMUST00000162353.8	2017	4	688	258	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTGATCAAGTTCTGGT	NA	False	NA	NA	False	ATTAAA	-16	NA	85084354	85091495	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_85084412_85089529_85089681_85090171_85090307_85090767
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002955	chr1	+	417	1	ISM	ENSMUSG00000036707.17	ENSMUST00000113360.8	3805	9	57719	0	8080	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGATGTCCTTTAGAC	NA	False	NA	15	True	AATAAA	-16	NA	85778880	85779297	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_+_85778900_85779300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002968	chr1	+	1553	12	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	-20827	136	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_9	456.519929774147	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGACCAGACTTTAGTTG	NA	False	NA	17	True	AATAAA	-17	NA	86017711	86067009	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060520_86061359_86061507_86064684_86064839_86066801
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002976	chr1	+	569	2	ISM	ENSMUSG00000062590.14	ENSMUST00000135973.8	4696	22	97493	2149	7711	-2149	3prime_fragment	FALSE	canonical	3	60	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCCCCAGAGTGCTTT	NA	False	NA	55	True	NA	NA	NA	86179998	86185400	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_+_86180115_86184947
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000002979	chr1	+	217	1	NIC	ENSMUSG00000062590.14	novel	4696	22	NA	NA	7711	4	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCTCTTTATTGTTTAT	NA	False	NA	12	True	AATAAA	-17	NA	86179998	86180215	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_86180000_86180200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003062	chr1	+	1209	5	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	-9	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9439.51567547297	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTCAAAGCCTGGTT	NA	False	NA	45	True	AATAAA	-34	NA	86454438	86458422	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_86454673_86456894_86456967_86457177_86457279_86457460_86457527_86457686
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003067	chr1	+	1204	5	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	-9	-12	at_least_one_novel_splicesite	FALSE	canonical	1	211	junction_1	9275.96190092974	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTCAAAGCCTGGTT	NA	False	NA	45	True	AATAAA	-34	NA	86454438	86458422	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_86454673_86456903_86456967_86457177_86457275_86457452_86457527_86457686
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003080	chr1	+	1140	5	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	-5	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9439.51567547297	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTCAAAGCCTGGTT	NA	False	NA	45	True	AATAAA	-34	NA	86454442	86458422	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_86454673_86456894_86456967_86457177_86457217_86457463_86457527_86457686
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003083	chr1	+	1213	5	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	-5	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9482.07599895719	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTCAAAGCCTGGTT	NA	False	NA	45	True	AATAAA	-34	NA	86454442	86458422	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_86454673_86456894_86456971_86457177_86457275_86457452_86457527_86457686
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003084	chr1	+	1155	5	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	-5	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9439.51567547297	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTCAAAGCCTGGTT	NA	False	NA	45	True	AATAAA	-34	NA	86454442	86458422	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_86454673_86456894_86456967_86457177_86457239_86457470_86457527_86457686
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003093	chr1	+	1291	6	NIC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	-5	-12	combination_of_known_junctions	FALSE	canonical	2	237	junction_1	10344.9409278159	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTCAAAGCCTGGTT	NA	False	NA	45	True	AATAAA	-34	NA	86454442	86458422	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_86454673_86456496_86456579_86456894_86456967_86457177_86457275_86457452_86457527_86457686
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003096	chr1	+	1112	4	FSM	ENSMUSG00000026238.15	ENSMUST00000186255.7	768	4	-15	-329	-5	-12	multi-exon	FALSE	canonical	3	33	junction_2	10628.523175347	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTCAAAGCCTGGTT	NA	False	NA	45	True	AATAAA	-34	NA	86454442	86458422	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_86454673_86456894_86456967_86457452_86457527_86457686
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003103	chr1	+	1204	5	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	-5	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9482.07599895719	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTCAAAGCCTGGTT	NA	False	NA	45	True	AATAAA	-34	NA	86454442	86458422	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_86454673_86456894_86456971_86457186_86457275_86457452_86457527_86457686
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003119	chr1	+	1194	5	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	-4	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9439.51567547297	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTCAAAGCCTGGTT	NA	False	NA	45	True	AATAAA	-34	NA	86454443	86458422	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_86454673_86456894_86456967_86457177_86457279_86457470_86457527_86457686
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003123	chr1	+	1216	5	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	-4	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10086.1501823044	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTCAAAGCCTGGTT	NA	False	NA	45	True	AATAAA	-34	NA	86454443	86458422	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_86454673_86456894_86456967_86457177_86457279_86457452_86457531_86457686
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003178	chr1	-	964	1	FSM	ENSMUSG00000084106.5	ENSMUST00000120149.2	891	1	-20	-53	-20	53	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGTTGAAGGGCATCTGG	NA	False	NA	NA	False	ATTAAA	-36	NA	86837425	86836461	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_86836500_86837400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003179	chr1	-	675	2	Genic_Genomic	ENSMUSG00000084106.5	novel	891	1	NA	NA	-20	51	multi-exon	FALSE	canonical	1	18	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCAGTTGAAGGGCATCT	NA	False	NA	NA	False	ATTAAA	-34	NA	86837425	86836463	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr1_-_86836834_86837120
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003180	chr1	-	755	2	Genic_Genomic	ENSMUSG00000084106.5	novel	891	1	NA	NA	-20	51	multi-exon	FALSE	canonical	2	41	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCAGTTGAAGGGCATCT	NA	False	NA	NA	False	ATTAAA	-34	NA	86837425	86836463	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr1_-_86836834_86837040
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003194	chr1	-	749	4	NIC	ENSMUSG00000026247.14	novel	3033	18	NA	NA	-723	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	5.09901951359278	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGGCCTCCAGACAAGT	NA	False	NA	NA	False	AATAAA	-19	NA	87077361	87075376	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_-_87075809_87075947_87076025_87076346_87076443_87077217
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003224	chr1	+	957	7	NNC	ENSMUSG00000026254.18	novel	1807	7	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	900.221083956602	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCTCATGCTCTTGCT	NA	False	NA	14	True	AATAAA	-14	NA	87141685	87155785	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152173_87153571_87153725_87153818_87153956_87155522
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003298	chr1	+	371	1	ISM	ENSMUSG00000048000.16	ENSMUST00000027475.15	5724	29	123423	0	7098	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGGTCTCTCTGAG	NA	False	NA	7	True	AATAAA	-17	NA	87378147	87378518	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_+_87378100_87378500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003325	chr1	-	702	3	ISM	ENSMUSG00000044783.17	ENSMUST00000147393.2	2030	5	-116	9734	11	0	5prime_fragment	FALSE	canonical	3	259	junction_2	28.5	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGCCTCTTTTCTTCCTC	8602	False	NA	NA	False	AAGAAA	-10	NA	88205344	88202433	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_88202820_88204940_88205008_88205095
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003380	chr1	+	787	1	ISM	ENSMUSG00000055013.17	ENSMUST00000027521.15	11921	18	434389	7636	100032	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATTTTTGCACAGACAAA	NA	False	NA	19	True	AATAAA	-20	NA	89816916	89817703	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_+_89816900_89817700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003389	chr1	+	647	1	FSM	ENSMUSG00000092627.3	ENSMUST00000189763.2	3030	1	1647	736	1647	692	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGAAGCTCTTCTTTC	NA	False	NA	27	True	GATAAA	-34	NA	89859629	89860276	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_89859600_89860300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003411	chr1	+	214	1	Intergenic	novelGene_9	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGTTTGTTGCGTCTTT	NA	False	NA	NA	False	NA	NA	NA	90478471	90478685	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr1_+_90478500_90478700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003429	chr1	-	1032	3	ISM	ENSMUSG00000026304.14	ENSMUST00000131428.8	1557	6	7595	-2	7545	0	3prime_fragment	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTCATGAGGTTATATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	90887794	90885854	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_90886722_90886889_90886984_90887723
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003437	chr1	+	1047	2	FSM	ENSMUSG00000070732.3	ENSMUST00000188818.2	630	2	-13	-404	-1	404	multi-exon	FALSE	canonical	3	55	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTGAAGGCTAATGATGC	4249	False	NA	NA	False	NA	NA	NA	91072809	91080851	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_91072892_91079886
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003490	chr1	-	232	1	ISM	ENSMUSG00000026260.13	ENSMUST00000027478.7	2020	10	34612	7	21469	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTCAGTTCCCTGGTAGC	NA	False	NA	-6	True	NA	NA	NA	92366970	92366738	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_92366700_92367000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003500	chr1	-	1458	10	NNC	ENSMUSG00000026260.13	novel	2020	10	NA	NA	-10	-207	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	414.122305545858	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGCGTGGCAC	NA	False	NA	-20	True	AATAAA	-20	NA	92401499	92367207	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401387
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003514	chr1	-	675	3	FSM	ENSMUSG00000073616.11	ENSMUST00000148508.2	649	3	-38	12	24	-12	multi-exon	FALSE	canonical	3	39	junction_2	285.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGATTTTAATTCCTGTG	NA	False	NA	-31	True	AATAAA	-18	NA	92569683	92564878	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_92565126_92567408_92567482_92569328
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003520	chr1	-	397	3	NNC	ENSMUSG00000073616.11	novel	438	3	NA	NA	23	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	305	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGATTTTAATTCCTGTG	NA	False	NA	-31	True	AATAAA	-18	NA	92569684	92564878	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_92565126_92567408_92567471_92569596
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003532	chr1	-	248	1	NIC	ENSMUSG00000073616.11	novel	482	2	NA	NA	2505	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGATTTTAATTCCTGTG	NA	False	NA	-31	True	AATAAA	-18	NA	92565126	92564878	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_-_92564900_92565100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003549	chr1	+	225	1	Genic_Genomic	ENSMUSG00000026270.12	novel	NA	NA	NA	NA	836	4	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTCTTGTTCCAAAAAGC	NA	False	NA	NA	False	AATAAA	-18	NA	92875442	92875667	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr1_+_92875400_92875700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003584	chr1	-	1137	6	ISM	ENSMUSG00000034088.16	ENSMUST00000186164.7	3808	25	27239	-240	27239	0	3prime_fragment	FALSE	canonical	3	528	junction_5	58.8340037733282	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	2236	False	NA	NA	False	AATAAA	-27	NA	93341275	93335483	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003587	chr1	-	1105	7	ISM	ENSMUSG00000034088.16	ENSMUST00000170883.8	6231	28	-42	25016	-28	62	5prime_fragment	FALSE	canonical	3	431	junction_6	30.9914862861113	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACAGTGTGGAGGTGGCA	NA	False	NA	4	True	NA	NA	NA	93406565	93358677	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003590	chr1	+	3223	13	FSM	ENSMUSG00000026276.21	ENSMUST00000027495.15	3779	13	29	527	0	-527	multi-exon	FALSE	canonical	3	766	junction_1	78.56892762975	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406714	93437455	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003604	chr1	-	1955	6	FSM	ENSMUSG00000026279.15	ENSMUST00000190116.7	5558	6	148	3455	18	0	multi-exon	FALSE	canonical	3	370	junction_4	24.3770383763081	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTGTAGACTGTACAT	NA	False	NA	-1	True	AATAAA	-38	NA	93682354	93633111	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_93633378_93642619_93642724_93644353_93644464_93652878_93653039_93677568_93678708_93682178
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003610	chr1	+	1653	13	NIC	ENSMUSG00000026280.18	novel	513	6	NA	NA	28	7	combination_of_known_junctions	FALSE	canonical	2	16	junction_1	90.4551761309926	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGAATTTCTGGGGCACT	NA	False	NA	21	True	ATTAAA	-27	NA	93679249	93715908	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_93679304_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003697	chr1	+	833	8	NNC	ENSMUSG00000026283.14	novel	4533	8	NA	NA	-8	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	97.6856683240606	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTTGACTGATATTTA	NA	False	NA	28	True	AATATA	-45	NA	93731696	93746130	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_93731762_93733769_93733842_93739503_93739671_93740128_93740241_93740387_93740482_93744096_93744233_93744359_93744419_93746002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003722	chr1	-	319	2	Antisense	novelGene_ENSMUSG00000081051.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCATCCTTTCTTGCACC	NA	False	NA	NA	False	NA	NA	NA	95426930	95426307	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr1_-_95426393_95426696
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003726	chr1	+	505	2	Genic_Genomic	ENSMUSG00000081051.5	novel	531	1	NA	NA	-38	62	multi-exon	FALSE	canonical	0	0	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGGAACCAAGACATTAG	NA	False	NA	NA	False	NA	NA	NA	95426307	95426938	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr1_+_95426544_95426669
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003740	chr1	-	489	1	Intergenic	novelGene_10	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTCTCATTCTTGTCA	NA	False	NA	NA	False	TATAAA	-17	NA	95758975	95758486	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr1_-_95758500_95759000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003744	chr1	-	1628	1	ISM	ENSMUSG00000044768.17	ENSMUST00000053033.14	40378	3	16542	37587	16144	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATTGTTTCGTGGTGTTT	NA	False	NA	-3	True	AATAAA	-16	NA	97573257	97571629	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_97571600_97573300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003784	chr1	+	404	1	ISM	ENSMUSG00000038866.16	ENSMUST00000118196.8	5796	14	43259	6	21921	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAAGAATTATGCCTTAT	NA	False	NA	10	True	AATAAA	-14	NA	105961394	105961798	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_+_105961400_105961800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003814	chr1	-	2322	1	ISM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	10578	3739	9148	1133	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGTGCTGCTGTTTGAA	NA	False	NA	-4	True	AATAAA	-24	NA	118228568	118226246	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_118226200_118228600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003832	chr1	+	1921	7	FSM	ENSMUSG00000026377.13	ENSMUST00000027626.13	1889	7	-22	-10	-22	10	multi-exon	FALSE	canonical	3	402	junction_6	29.1985539976821	603	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTAAATTTATTTAT	NA	False	NA	16	True	NA	NA	NA	118249546	118261562	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_118249728_118251311_118251456_118255354_118255464_118257082_118257295_118258335_118258393_118260073_118260209_118260479
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003853	chr1	+	1286	1	ISM	ENSMUSG00000026380.11	ENSMUST00000027629.10	9269	15	51274	4663	51274	-4663	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTCCAGTCTGAGTT	9675	False	NA	NA	False	NA	NA	NA	118606949	118608235	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_+_118606900_118608200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003859	chr1	-	986	1	ISM	ENSMUSG00000048402.15	ENSMUST00000062483.15	6637	14	218502	0	147471	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCTTGTTGATCTGCTT	NA	False	NA	-3	True	ATTAAA	-17	NA	118762847	118761861	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_118761900_118762800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003867	chr1	+	322	2	Antisense	novelGene_ENSMUSG00000099860.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGGTAATAGTAACACCTA	NA	False	NA	NA	False	NA	NA	NA	119233319	119247245	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr1_+_119233438_119247041
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003869	chr1	+	539	3	Antisense	novelGene_ENSMUSG00000099860.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGGTAATAGTAACACCTA	NA	False	NA	NA	False	NA	NA	NA	119233321	119247245	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr1_+_119233438_119234108_119234328_119247041
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003874	chr1	-	901	1	Genic_Genomic	ENSMUSG00000037035.6	novel	NA	NA	NA	NA	5885	2	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGCCTTGTGTGATGTC	NA	False	NA	-1	True	AATAAA	-19	NA	119344093	119343192	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr1_-_119343200_119344100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003890	chr1	-	553	5	NNC	ENSMUSG00000098447.3	novel	607	4	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	3.8405728739343	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGATTTGAATCCCTTCT	NA	False	NA	NA	False	NA	NA	NA	119454120	119447819	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_119447988_119448121_119448209_119448474_119448600_119453862_119454007_119454091
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003921	chr1	-	556	4	NNC	ENSMUSG00000026385.17	novel	491	4	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1290.6796659125	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGGTTACTCTGTTGT	NA	False	NA	-11	True	ATTAAA	-19	NA	120048798	120041019	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_120041264_120044115_120044179_120047624_120047743_120048667
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003922	chr1	-	538	4	NNC	ENSMUSG00000026385.17	novel	569	4	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	2	32	junction_3	1275.59720218501	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGGTTACTCTGTTGT	NA	False	NA	-11	True	ATTAAA	-19	NA	120048798	120041019	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_120041264_120044115_120044179_120047624_120047743_120048685
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003942	chr1	+	943	6	FSM	ENSMUSG00000026388.16	ENSMUST00000112644.9	488	6	-29	-426	-21	426	multi-exon	FALSE	canonical	3	34	junction_1	7.2773621594641	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGGACTGTTTGGTGACT	NA	False	NA	NA	False	NA	NA	NA	120048895	120116345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_120048948_120078332_120078478_120088335_120088387_120093864_120093903_120099130_120099213_120115770
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003957	chr1	-	944	1	Genic_Genomic	ENSMUSG00000003721.15	novel	NA	NA	NA	NA	2024	2	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTCCTTTTTATTCAT	NA	False	NA	1	True	ATTAAA	-19	NA	121233023	121232079	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr1_-_121232100_121233000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003976	chr1	+	520	2	ISM	ENSMUSG00000026339.19	ENSMUST00000112621.2	2338	24	68096	-5	7989	5	3prime_fragment	FALSE	canonical	3	79	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTGAGCAACTGCTAAGA	NA	False	NA	NA	False	AATAAA	-19	NA	121426934	121429322	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_+_121427051_121428918
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000003981	chr1	-	279	1	ISM	ENSMUSG00000001674.12	ENSMUST00000001724.12	2258	13	13876	0	5102	0	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTATACCTTTCCCT	NA	False	NA	-16	True	CATAAA	-23	NA	121481842	121481563	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_121481600_121481800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004003	chr1	-	433	2	FSM	ENSMUSG00000102014.2	ENSMUST00000188163.2	465	2	33	-1	33	1	multi-exon	FALSE	canonical	3	3	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTGATGAATTTAGCATAT	NA	False	NA	NA	False	AATAAA	-15	NA	127701758	127681351	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_127681691_127701664
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004022	chr1	+	528	1	FSM	ENSMUSG00000058603.11	ENSMUST00000121497.2	414	1	-47	-67	-47	67	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTCAATTCTGTCCC	NA	False	NA	NA	False	AATAAA	-44	NA	127966258	127966786	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_127966300_127966800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004034	chr1	+	2204	12	NNC	ENSMUSG00000026353.10	novel	4113	13	NA	NA	129	572	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	114.066386354034	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGATCTTATTTTTG	223	False	NA	14	True	AATAAA	-17	NA	128172027	128205329	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_128172290_128179939_128180078_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004044	chr1	-	2975	17	FSM	ENSMUSG00000026355.12	ENSMUST00000027601.11	2910	17	-52	-13	-52	13	multi-exon	FALSE	canonical	3	2842	junction_6	235.478734443261	543	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTCTACTCTTGATTAT	NA	False	NA	-8	True	AATAAA	-30	NA	128287453	128259313	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004058	chr1	-	2186	16	NNC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	3	5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	505.426271137102	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGTGTGACTTTATAGA	NA	False	NA	1	True	AATAAA	-19	NA	128345102	128291438	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341486_128343086_128343149_128344888
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004073	chr1	-	620	1	NIC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	15161	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGTGTTGTGTGACTTT	7907	False	NA	-4	True	AATAAA	-14	NA	128292063	128291443	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_-_128291400_128292100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004117	chr1	+	160	2	Intergenic	novelGene_11	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCATGATTATATTCACAT	NA	False	NA	NA	False	NA	NA	NA	131779599	131779916	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr1_+_131779648_131779804
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004129	chr1	-	509	2	Intergenic	novelGene_12	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATGTTATCATGATACAG	6628	False	NA	NA	False	NA	NA	NA	131821199	131802030	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr1_-_131802419_131821078
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004166	chr1	-	839	5	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	1950	6449	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	39.6169155790806	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCCACTGTAGAACAGGC	NA	False	NA	NA	False	AATAAA	-14	NA	132206199	132196004	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_132196405_132196619_132196718_132202453_132202560_132202761_132202875_132206077
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004174	chr1	-	600	5	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	1954	6210	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	46.706530592627	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCCTTCTTAATTTCGAG	NA	False	NA	2	True	AATAAA	-20	NA	132206195	132196243	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_132196405_132196619_132196722_132202453_132202560_132202761_132202875_132206077
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004188	chr1	-	191	1	Intergenic	novelGene_13	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGGGAGGTTGCTTTAA	NA	False	NA	NA	False	NA	NA	NA	132335392	132335201	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr1_-_132335200_132335400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004195	chr1	+	155	1	Intergenic	novelGene_14	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	132398007	132398162	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr1_+_132398000_132398200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004202	chr1	+	1904	1	FSM	ENSMUSG00000026439.15	ENSMUST00000187834.2	1923	1	29	-10	29	6	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATACATGCTTGTTTGTAA	NA	False	NA	15	True	AATAAA	-24	NA	132431499	132433403	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_132431500_132433400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004214	chr1	-	1769	1	ISM	ENSMUSG00000054387.14	ENSMUST00000188090.7	7105	11	37428	0	13433	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	-5	True	ATTAAA	-15	NA	132915726	132913957	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_132914000_132915700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004217	chr1	-	922	1	ISM	ENSMUSG00000054387.14	ENSMUST00000188090.7	7105	11	33199	5076	9204	58	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTGTTATGTAATGTT	NA	False	NA	0	True	AATACA	-20	NA	132919955	132919033	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_132919000_132920000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004222	chr1	+	174	1	FSM	ENSMUSG00000100228.2	ENSMUST00000186115.2	639	1	528	-63	528	63	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTTCCATATCCCATCTC	NA	False	NA	NA	False	AATAAA	-42	NA	132954066	132954240	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_132954100_132954200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004237	chr1	+	590	3	NIC	ENSMUSG00000115958.2	novel	656	3	NA	NA	-6	3	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	18	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTGTTATTTTTCCCCT	5602	False	NA	7	True	AATAAA	-19	NA	133251697	133257463	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_133251787_133254947_133255079_133257093
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004269	chr1	-	857	5	FSM	ENSMUSG00000090553.9	ENSMUST00000166915.8	503	5	-126	-228	-126	228	multi-exon	FALSE	canonical	3	3763	junction_3	447.106461035848	25964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATCAGTTCTAAGTGCTT	NA	False	NA	NA	False	AATAAA	-28	NA	133538155	133531380	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_133531815_133534238_133534318_133536634_133536698_133537455_133537483_133537901
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004287	chr1	-	401	3	NNC	ENSMUSG00000090553.9	novel	503	5	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	55	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTTCATTCTGGTGGC	NA	False	NA	-9	True	AATAAA	-30	NA	133538019	133531608	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_133531815_133536634_133536698_133537887
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004288	chr1	-	385	3	NNC	ENSMUSG00000090553.9	novel	503	5	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	2438.5	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTTCATTCTGGTGGC	NA	False	NA	-9	True	AATAAA	-30	NA	133538019	133531608	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_133531815_133534238_133534318_133537919
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004320	chr1	-	208	1	NIC	ENSMUSG00000090553.9	novel	503	5	NA	NA	5847	0	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTTCATTCTGGTGGC	NA	False	NA	-9	True	AATAAA	-30	NA	133531816	133531608	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_-_133531600_133531800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004335	chr1	-	498	4	NNC	ENSMUSG00000090553.9	novel	653	4	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2134.95688220837	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACATTGTTTCATTCTG	NA	False	NA	-14	True	AATAAA	-25	NA	133538019	133531613	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_133531815_133534238_133534318_133536634_133536698_133537864
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004392	chr1	-	1371	8	NNC	ENSMUSG00000042305.13	novel	1689	9	NA	NA	0	161	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	265.828009457703	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTGATTTGTGCATCT	NA	False	NA	0	True	AATAAA	-28	NA	134289679	134275258	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_134275709_134277916_134277977_134280088_134280174_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004421	chr1	+	312	1	ISM	ENSMUSG00000026456.19	ENSMUST00000027726.14	1837	9	5648	0	5116	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTCGTCGTGTCTGGG	NA	False	NA	43	True	AATAAA	-31	NA	134339166	134339478	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_+_134339200_134339500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004423	chr1	+	2017	8	FSM	ENSMUSG00000026457.15	ENSMUST00000027727.15	3123	8	92	1014	-1	-1011	multi-exon	FALSE	canonical	3	879	junction_4	75.4485904170407	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTTGGCATTCAAAGAGTT	NA	False	NA	8	True	AATAAA	-16	NA	134343207	134360075	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004454	chr1	+	156	1	Intergenic	novelGene_15	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCGTCTGTTCGTGATTC	6182	False	NA	33	True	NA	NA	NA	134461726	134461882	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr1_+_134461700_134461900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004461	chr1	+	669	1	ISM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	71111	3335	8482	428	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTGTTGGTGCTTTAGC	NA	False	NA	9	True	ATTAAA	-19	NA	134559019	134559688	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_+_134559000_134559700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004464	chr1	+	313	1	ISM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	72400	2402	9771	1361	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGGTCTGCAGTGTCC	85	False	NA	24	True	ATTAAA	-16	NA	134560308	134560621	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_+_134560300_134560600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004467	chr1	+	980	7	NNC	ENSMUSG00000026429.10	novel	1116	7	NA	NA	-23	18	at_least_one_novel_splicesite	FALSE	canonical	3	165	junction_1	233.142779333943	378	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTGTCTGGGAGTGAACT	NA	False	NA	33	True	AATAAA	-35	NA	134890279	134901918	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_134890348_134895464_134895637_134896978_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004485	chr1	+	1090	7	NNC	ENSMUSG00000026429.10	novel	1116	7	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	293.41973159433	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTTTATATGAAACG	NA	False	NA	15	True	AATAAA	-17	NA	134890333	134901900	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_134890530_134895464_134895637_134896978_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004499	chr1	-	888	6	ISM	ENSMUSG00000097993.8	ENSMUST00000183317.8	6108	37	22367	-1	237	0	3prime_fragment	FALSE	canonical	3	8	junction_5	3.5213633723318	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGTGTCTGCTTCTGCA	NA	False	NA	0	True	AATAAA	-19	NA	135037965	135036234	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_135036434_135036656_135036793_135037023_135037188_135037300_135037418_135037546_135037676_135037822
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004512	chr1	+	226	1	Genic_Genomic	ENSMUSG00000026426.11	novel	NA	NA	NA	NA	1863	1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGTATGGTGCTGGTT	NA	False	NA	16	True	AATAAA	-20	NA	135083782	135084008	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr1_+_135083800_135084000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004516	chr1	+	719	2	Genic_Genomic	ENSMUSG00000079139.5	novel	1231	1	NA	NA	0	188	multi-exon	FALSE	canonical	3	66	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTCTTATTACCTGGG	4161	False	NA	NA	False	AATAAA	-25	NA	135159732	135161151	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr1_+_135160090_135160789
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004521	chr1	+	1419	1	FSM	ENSMUSG00000079139.5	ENSMUST00000110798.5	1231	1	0	-188	0	188	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTCTTATTACCTGGG	4161	False	NA	NA	False	AATAAA	-25	NA	135159732	135161151	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_135159700_135161200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004530	chr1	-	1989	9	FSM	ENSMUSG00000003051.14	ENSMUST00000003135.14	2095	9	107	-1	-23	1	multi-exon	FALSE	canonical	3	306	junction_7	111.074791807142	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGCTCTCTGTGTACT	NA	False	NA	-5	True	AATAAA	-28	NA	135186199	135181311	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135185025_135185352_135185521_135186086
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004553	chr1	-	920	6	NNC	ENSMUSG00000062580.10	novel	7280	6	NA	NA	23	270	at_least_one_novel_splicesite	FALSE	canonical	2	49	junction_3	1040.74692408866	29	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCTTTGAAAGTTAGA	NA	False	NA	-17	True	AATAAA	-18	NA	135241493	135229283	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_135229742_135232167_135232279_135233826_135233952_135236872_135236937_135237508_135237609_135241431
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004575	chr1	-	1411	5	ISM	ENSMUSG00000041879.14	ENSMUST00000161032.8	4226	25	42981	0	82	0	3prime_fragment	TRUE	canonical	3	585	junction_4	29.4310635213884	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTGCATACTCTAAG	NA	False	NA	-19	True	AGTAAA	-19	NA	135315215	135312210	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004593	chr1	+	1755	6	NNC	ENSMUSG00000026421.15	novel	1823	6	NA	NA	72	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	181.021987614765	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTTCCTGTCTGTCT	NA	False	NA	24	True	AATAAA	-17	NA	135656956	135679970	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_135657013_135667137_135667251_135672996_135673166_135674457_135674588_135678302_135678401_135678781
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004651	chr1	+	1451	6	NNC	ENSMUSG00000026411.18	novel	1806	6	NA	NA	45	248	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	170.560722324925	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGCAGATCTCAAGGGA	NA	False	NA	22	True	ATTAAA	-17	NA	135945749	135962766	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_135945805_135946243_135946346_135947395_135947488_135952355_135952465_135955134_135955267_135961805
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004674	chr1	+	395	3	ISM	ENSMUSG00000041498.14	ENSMUST00000201676.4	4990	28	32080	24165	23675	7565	internal_fragment	FALSE	canonical	3	52	junction_1	4	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTGTGGTTTGCCT	NA	False	NA	NA	False	ATTAAA	-28	NA	136427752	136431219	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_+_136427882_136430384_136430479_136431047
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004684	chr1	+	268	1	Intergenic	novelGene_16	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGGTTATGGTGTTTTA	NA	False	NA	NA	False	TTTAAA	-30	NA	136721328	136721596	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr1_+_136721300_136721600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004699	chr1	-	220	1	Intergenic	novelGene_17	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAGTAAAACTTGA	NA	False	NA	NA	False	NA	NA	NA	138778010	138777790	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr1_-_138777800_138778000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004701	chr1	-	579	3	FSM	ENSMUSG00000079283.3	ENSMUST00000112025.3	565	3	-5	-9	-5	9	multi-exon	FALSE	canonical	3	59	junction_1	0	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGATGCACGTTATTCTCG	NA	False	NA	8	True	ATTAAA	-25	NA	138784595	138779711	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_138779912_138781308_138781411_138784318
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004716	chr1	-	1180	4	ISM	ENSMUSG00000026361.10	ENSMUST00000162638.2	3134	8	23151	1612	19147	-1612	3prime_fragment	FALSE	canonical	3	345	junction_2	20.6774165590278	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTGTAGTGATTTTTAC	NA	False	NA	NA	False	ATTAAA	-7	NA	143493168	143483510	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004727	chr1	+	644	4	FSM	ENSMUSG00000018196.19	ENSMUST00000111957.10	580	4	-59	-5	-1	5	multi-exon	FALSE	canonical	3	64	junction_1	245.711664806989	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATTGGCCAGTTTTTGAGC	NA	False	NA	36	True	AATAAA	-23	NA	143615293	143622519	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_143615423_143617385_143617450_143620784_143620962_143622245
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004731	chr1	+	688	4	NIC	ENSMUSG00000018196.19	novel	3337	4	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	254.24004405286	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGATTGGCCAGTTTT	NA	False	NA	31	True	AATAAA	-18	NA	143615322	143622514	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_143615497_143617385_143617454_143620784_143620962_143622245
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004797	chr1	-	552	1	ISM	ENSMUSG00000006010.15	ENSMUST00000111913.9	3273	14	31224	0	20618	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGGAATTTTAAAATAGGA	NA	False	NA	NA	False	AATAAA	-21	NA	150237607	150237055	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_150237100_150237600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004799	chr1	-	1730	14	FSM	ENSMUSG00000006010.15	ENSMUST00000111913.9	3273	14	330	1213	-2	3	multi-exon	FALSE	canonical	3	106	junction_9	14.7515920312223	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTGCTATTGAACCGGA	963	False	NA	NA	False	NA	NA	NA	150268501	150238268	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004811	chr1	+	212	1	NIC	ENSMUSG00000006005.19	novel	7430	52	NA	NA	-335	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGTTTGGCTTGC	NA	False	NA	18	True	AATAAA	-19	NA	150315854	150316066	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_150315900_150316100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004818	chr1	+	203	1	NIC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	859	3	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACTGTTTTCTTCATT	6052	False	NA	22	True	AATAAA	-21	NA	150325480	150325683	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_150325500_150325700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004832	chr1	-	801	1	Genic_Genomic	ENSMUSG00000052748.15	novel	NA	NA	NA	NA	3866	1	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTTTTCCGTTTACTC	8581	False	NA	1	True	AATAAA	-19	NA	151244249	151243448	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr1_-_151243400_151244200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004839	chr1	+	2646	15	FSM	ENSMUSG00000053286.12	ENSMUST00000065625.12	2749	15	103	0	3	0	multi-exon	FALSE	canonical	3	148	junction_10	24.5323609686038	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGACTGGGCTCGCGT	NA	False	NA	15	True	AATAAA	-16	NA	151304395	151333912	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_151304854_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004880	chr1	+	1234	1	ISM	ENSMUSG00000008475.14	ENSMUST00000077755.11	1914	4	7805	17	5848	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCTTAATTGAATAC	NA	False	NA	83	True	AATAAA	-18	NA	152650097	152651331	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_+_152650100_152651300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004934	chr1	-	1140	1	ISM	ENSMUSG00000026479.14	ENSMUST00000185356.7	4916	23	62152	0	3020	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGTTTCTGATTTTATT	NA	False	NA	-1	True	AATAAA	-19	NA	152999641	152998501	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_152998500_152999600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004951	chr1	-	697	1	NIC	ENSMUSG00000073538.11	novel	766	4	NA	NA	0	-7290	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGTTGTCATCTACTC	NA	False	NA	NA	False	AGTAAA	-5	NA	153289979	153289282	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_-_153289300_153290000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004953	chr1	-	828	1	Genic_Genomic	ENSMUSG00000042699.12	novel	NA	NA	NA	NA	21556	2	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCATTGATGTTCTTT	695	False	NA	1	True	AATAAA	-20	NA	153332329	153331501	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr1_-_153331500_153332300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004957	chr1	-	1029	2	ISM	ENSMUSG00000042699.12	ENSMUST00000186380.7	4561	28	30043	2	20574	-2	3prime_fragment	FALSE	canonical	3	185	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGTGTCATTGATGTT	NA	False	NA	-3	True	AATAAA	-16	NA	153333311	153331505	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_153332500_153333276
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004962	chr1	-	768	6	ISM	ENSMUSG00000042699.12	ENSMUST00000188345.2	2346	19	-39	13746	-30	189	5prime_fragment	FALSE	canonical	3	83	junction_2	16.7403703662733	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCCAAGGAGAATATAAGTA	NA	False	NA	NA	False	AAAAAG	-6	NA	153363436	153353833	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363278
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004972	chr1	+	173	1	ISM	ENSMUSG00000026475.8	ENSMUST00000027748.8	2339	5	4945	2	4945	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCCCAGGACAGTATGG	NA	False	NA	NA	False	AATAAA	-21	NA	153621039	153621212	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_+_153621000_153621200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004976	chr1	+	542	1	ISM	ENSMUSG00000026473.17	ENSMUST00000086199.12	2792	7	9238	0	3139	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTATTTCATTCCTTCTT	NA	False	NA	87	True	NA	NA	NA	153784927	153785469	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_+_153784900_153785500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000004996	chr1	+	707	4	FSM	ENSMUSG00000033701.14	ENSMUST00000097529.5	1255	4	551	-3	551	3	multi-exon	FALSE	canonical	3	9	junction_3	164.081280671095	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCGGAGATAAGTGTTATT	NA	False	NA	9	True	NA	NA	NA	155434422	155463547	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155463185
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005022	chr1	+	1754	3	NNC	ENSMUSG00000050565.17	novel	2491	3	NA	NA	9	-731	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	122	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTCTAATTTTCTCCT	NA	False	NA	10	True	AATAAA	-14	NA	155911480	155928544	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_155911670_155916820_155916881_155927039
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005026	chr1	+	2592	2	FSM	ENSMUSG00000050565.17	ENSMUST00000065648.15	2529	2	-60	-3	-33	3	multi-exon	FALSE	canonical	3	145	junction_1	0	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTTTTGTCTCTTTAA	NA	False	NA	13	True	AATAAA	-22	NA	155916602	155929485	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_155916749_155927039
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005043	chr1	+	506	1	FSM	ENSMUSG00000078193.3	ENSMUST00000102782.4	445	1	-1	-60	-1	60	mono-exon	FALSE	NA	NA	NA	NA	NA	603	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGACAGTGGGTGAGGACT	NA	False	NA	NA	False	NA	NA	NA	156193608	156194114	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_156193600_156194100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005050	chr1	+	806	1	FSM	ENSMUSG00000101523.3	ENSMUST00000190422.3	2633	1	1873	-46	1873	46	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTAGACAGTGAGAAAGTA	NA	False	NA	NA	False	NA	NA	NA	156353454	156354260	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_156353500_156354300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005214	chr1	+	900	10	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	2	intron_retention	TRUE	canonical	3	3085	junction_6	967.274955483792	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGTGTGCATTTTGTTC	NA	False	NA	24	True	ATTAAA	-20	NA	160862732	160866111	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005228	chr1	+	149	3	NNC	ENSMUSG00000053332.14	novel	2556	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2270.5	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862752_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005229	chr1	+	192	4	NNC	ENSMUSG00000053332.14	novel	2556	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2419.62407548501	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862752_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005234	chr1	+	114	2	NIC	ENSMUSG00000053332.14	novel	1614	7	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_160862765_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005238	chr1	+	422	7	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2097.99884148893	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863827_160865481_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005242	chr1	+	436	9	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2347.09346852655	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863829_160864389_160864427_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005244	chr1	+	419	8	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2371.02134197093	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864389_160864427_160865509_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005245	chr1	+	512	12	NNC	ENSMUSG00000053332.14	novel	502	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_8	2048.64953300727	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864693_160864735_160864857_160864895_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005246	chr1	+	1086	9	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	3576	junction_1	753.146068170046	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005247	chr1	+	431	8	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2451.40972353727	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863827_160864389_160864427_160865509_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005250	chr1	+	909	10	FSM	ENSMUSG00000053332.14	ENSMUST00000162289.8	904	10	1	-6	1	0	multi-exon	FALSE	canonical	3	3085	junction_7	1101.2203780296	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005252	chr1	+	392	8	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1967.91313894922	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863837_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005256	chr1	+	333	7	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2482.15516235388	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863831_160864389_160864423_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005258	chr1	+	1634	7	FSM	ENSMUSG00000053332.14	ENSMUST00000162163.8	1614	7	-20	0	1	0	multi-exon	FALSE	canonical	3	3085	junction_3	1089.57866474462	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_160862765_160863321_160863375_160863552_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005266	chr1	+	459	10	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2280.88639906333	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864389_160864423_160864693_160864735_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005267	chr1	+	471	10	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2344.38571806384	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863827_160864389_160864423_160864693_160864735_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005268	chr1	+	438	10	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1774.59954794189	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864427_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005269	chr1	+	466	11	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1743.80430381393	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864427_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005275	chr1	+	878	9	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_4	1891.70653362909	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863827_160864389_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005279	chr1	+	446	9	NNC	ENSMUSG00000053332.14	novel	904	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1869.76893208091	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160865509_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005282	chr1	+	391	9	NIC	ENSMUSG00000053332.14	novel	557	11	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_6	1860.99455936873	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005283	chr1	+	808	11	FSM	ENSMUSG00000053332.14	ENSMUST00000161461.8	793	11	-14	-1	1	1	multi-exon	FALSE	canonical	3	1206	junction_6	1709.07735342787	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGTGTGCATTTTGTT	NA	False	NA	23	True	ATTAAA	-19	NA	160862733	160866110	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160864150_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005286	chr1	+	761	10	NNC	ENSMUSG00000053332.14	novel	502	12	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_6	1774.59954794189	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864735_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005288	chr1	+	1078	10	NIC	ENSMUSG00000053332.14	novel	793	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	1206	junction_5	1509.85648896971	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160864150_160864389_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005302	chr1	+	486	10	NNC	ENSMUSG00000053332.14	novel	502	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2198.66847472019	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863749_160863815_160864118_160864150_160864389_160864423_160864693_160864735_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005306	chr1	+	370	8	NIC	ENSMUSG00000053332.14	novel	557	11	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	1967.59352654818	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005310	chr1	+	446	10	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2263.00763488671	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864125_160864150_160864389_160864427_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005315	chr1	+	447	10	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1812.10300037018	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863831_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005317	chr1	+	475	10	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2344.38571806384	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863831_160864389_160864423_160864693_160864735_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005325	chr1	+	451	9	NNC	ENSMUSG00000053332.14	novel	904	10	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1869.76893208091	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGTGTGCATTTTGTT	NA	False	NA	23	True	ATTAAA	-19	NA	160862733	160866110	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864427_160865509_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005328	chr1	+	449	9	NNC	ENSMUSG00000053332.14	novel	1066	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2203.4139952299	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863749_160863815_160864118_160864150_160864389_160864427_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005335	chr1	+	882	9	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_4	1891.70653362909	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863831_160864389_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005344	chr1	+	766	10	FSM	ENSMUSG00000053332.14	ENSMUST00000160429.8	759	10	-2	-5	1	0	multi-exon	FALSE	canonical	3	3085	junction_6	1099.1542202985	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005345	chr1	+	507	12	NNC	ENSMUSG00000053332.14	novel	502	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1906.12744450909	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864427_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005347	chr1	+	1823	6	NIC	ENSMUSG00000053332.14	novel	1614	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	3576	junction_1	897.552984508436	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_160862765_160863321_160863375_160863552_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005348	chr1	+	426	8	NNC	ENSMUSG00000053332.14	novel	1066	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2387.96957557619	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863626_160864389_160864427_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005357	chr1	+	488	11	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2061.08743143031	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863831_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005449	chr1	+	3376	1	FSM	ENSMUSG00000065160.3	ENSMUST00000083226.3	84	1	-2192	-1100	-2192	1100	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_160862700_160866100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005453	chr1	+	481	10	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2344.38571806384	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862734	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863831_160864389_160864423_160864693_160864742_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005479	chr1	+	644	9	NNC	ENSMUSG00000053332.14	novel	1066	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	1831.38065660173	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863815_160864118_160864150_160864389_160864427_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005480	chr1	+	482	11	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2061.08743143031	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863827_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005481	chr1	+	756	9	NNC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_6	1869.76893208091	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864735_160865509_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005483	chr1	+	471	10	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2344.38571806384	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863829_160864389_160864423_160864693_160864735_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005484	chr1	+	483	10	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1774.59954794189	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160865023_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005488	chr1	+	438	8	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2451.40972353727	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863831_160864389_160864427_160865504_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005489	chr1	+	393	9	NIC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	84	junction_3	1799.182731131	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGTGTGCATTTTGTT	NA	False	NA	23	True	ATTAAA	-19	NA	160862735	160866110	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005490	chr1	+	624	11	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1389	junction_6	1406.66237598082	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864693_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005493	chr1	+	425	8	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2451.40972353727	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863827_160864389_160864423_160865509_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005494	chr1	+	451	11	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1764.8963737285	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863330_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005495	chr1	+	468	9	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2413.28862757856	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863829_160864389_160864423_160864693_160864735_160865509_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005497	chr1	+	638	9	NNC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_6	1846.83854447946	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864427_160865059_160865118_160865564_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005500	chr1	+	457	9	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1898.34378060851	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863431_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005501	chr1	+	435	10	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1810.26142986157	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864904_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005503	chr1	+	481	11	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2287.37353530201	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864125_160864150_160864389_160864423_160864693_160864735_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005504	chr1	+	1628	7	NIC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	3576	junction_1	865.328967631514	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005505	chr1	+	464	11	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_9	1733.89434510872	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865612_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005506	chr1	+	431	8	NNC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1967.91313894922	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863827_160865023_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005507	chr1	+	451	8	NNC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1967.91313894922	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863831_160865007_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005510	chr1	+	450	10	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1825.59512366668	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865988
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005512	chr1	+	443	10	NNC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1812.10300037018	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863829_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005513	chr1	+	445	10	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1797.61354146114	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865766_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005517	chr1	+	458	9	NNC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1708.30001390271	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863442_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005518	chr1	+	435	10	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1825.59512366668	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160866003
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005519	chr1	+	948	11	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1206	junction_7	1711.61748355174	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005520	chr1	+	456	10	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1810.26142986157	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864925_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005522	chr1	+	428	10	NIC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	68	junction_2	1652.03833692402	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_160862765_160863321_160863375_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005530	chr1	+	474	10	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2042.29511416282	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863626_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005531	chr1	+	322	7	NNC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2248.0122330628	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863383_160863777_160863815_160864118_160864150_160864389_160864423_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005534	chr1	+	334	7	NNC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2065.87630048096	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864171_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005538	chr1	+	476	11	NNC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2113.80102185613	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864693_160864735_160864857_160864904_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005539	chr1	+	414	9	NNC	ENSMUSG00000053332.14	novel	1066	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2302.19894543782	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160864118_160864150_160864389_160864427_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005540	chr1	+	388	8	NNC	ENSMUSG00000053332.14	novel	1066	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2331.7998828968	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863777_160863815_160864389_160864427_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005542	chr1	+	453	11	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1758.59751222387	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864125_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005543	chr1	+	447	10	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1774.59954794189	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005544	chr1	+	394	7	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2097.99884148893	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863829_160865509_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005547	chr1	+	801	10	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	1929.29895794711	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863749_160864150_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005550	chr1	+	573	11	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1719.29015584921	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863664_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005552	chr1	+	444	8	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2221.99842024963	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863431_160864389_160864423_160864693_160864735_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005554	chr1	+	350	8	NNC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1954.09814262754	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864427_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005555	chr1	+	245	5	NIC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	2269.02262824768	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005557	chr1	+	468	11	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	1671.54673581088	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863383_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005558	chr1	+	408	7	NNC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2097.99884148893	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160865481_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005560	chr1	+	470	9	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2413.28862757856	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863831_160864389_160864423_160864693_160864735_160865509_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005561	chr1	+	447	10	NNC	ENSMUSG00000053332.14	novel	904	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1797.61354146114	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865133_160865779_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005563	chr1	+	500	10	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2022.11878856355	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864630_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005566	chr1	+	461	9	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2348.34408413673	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863626_160864389_160864423_160864693_160864735_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005567	chr1	+	455	10	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2222.97175692782	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863589_160863777_160863815_160864118_160864150_160864389_160864427_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005568	chr1	+	433	9	NNC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2269.71826445486	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864389_160864455_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005572	chr1	+	469	11	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	1732.54633704268	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864895_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005574	chr1	+	319	6	NNC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2453.70898029901	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863626_160864389_160864423_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005575	chr1	+	653	10	NIC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	3085	junction_6	1054.71524446818	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_160862765_160863321_160863375_160863552_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005577	chr1	+	434	8	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2451.40972353727	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863827_160864389_160864427_160865504_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005581	chr1	+	333	6	NNC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2241.41407151825	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863431_160864118_160864150_160864389_160864423_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005582	chr1	+	442	9	NNC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2347.09346852655	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863837_160864389_160864427_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005583	chr1	+	868	8	NNC	ENSMUSG00000053332.14	novel	1066	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	1926.68964277899	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863626_160864389_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005584	chr1	+	446	9	NNC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2360.74278234097	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864125_160864150_160864389_160864427_160865504_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005585	chr1	+	407	10	NIC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	134	junction_1	1715.73345364326	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_160862765_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005586	chr1	+	431	8	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2451.40972353727	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863829_160864389_160864427_160865509_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005587	chr1	+	494	11	NNC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	2045.7949164078	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865139_160865779_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005588	chr1	+	502	11	NNC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1958.72246375029	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864659_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005592	chr1	+	339	8	NNC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2401.47189558948	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864125_160864150_160864389_160864423_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005593	chr1	+	647	10	NIC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	3085	junction_7	1074.40723823895	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005597	chr1	+	437	10	NNC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1776.10241891315	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863599_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005600	chr1	+	314	7	NIC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	68	junction_2	2232.27982614685	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_160862765_160863321_160863375_160863777_160863815_160864118_160864150_160864389_160864423_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005605	chr1	+	450	11	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_3	1713.68375437243	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863787_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005608	chr1	+	447	9	NNC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1708.30001390271	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863431_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005609	chr1	+	489	11	NNC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1958.72246375029	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864171_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005610	chr1	+	424	9	NNC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2365.51731921371	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864427_160865059_160865118_160865564_160865629_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005611	chr1	+	356	8	NIC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	1970.3856040307	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005616	chr1	+	478	10	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2358.9078661507	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864125_160864150_160864389_160864423_160864693_160864735_160865509_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005620	chr1	+	449	7	NNC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2097.99884148893	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160865440_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005624	chr1	+	454	9	NNC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1869.76893208091	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864455_160865531_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005625	chr1	+	469	11	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	68	junction_2	1904.37666704883	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_160862765_160863321_160863375_160863777_160863815_160864118_160864150_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005626	chr1	+	447	10	NNC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1776.10241891315	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863609_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005629	chr1	+	419	9	NNC	ENSMUSG00000053332.14	novel	1066	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2189.28586744057	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863777_160863815_160864118_160864150_160864389_160864427_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005642	chr1	+	439	8	NNC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1970.3856040307	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160865481_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005643	chr1	+	160	3	NIC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2270.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_160862765_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005655	chr1	+	374	9	NIC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	1867.79341737784	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005667	chr1	+	451	10	NNC	ENSMUSG00000053332.14	novel	904	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1797.61354146114	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865133_160865775_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005678	chr1	+	451	11	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1781.54639569111	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865834_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005695	chr1	+	466	9	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1860.54535015946	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160865007_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005697	chr1	+	690	11	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1206	junction_7	1691.46642000366	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864693_160864735_160864857_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005699	chr1	+	505	12	NNC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1983.9646882688	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863589_160863777_160863815_160864118_160864150_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005701	chr1	+	435	8	NNC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1967.91313894922	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160865007_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005708	chr1	+	507	11	NNC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1939.64689827814	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864693_160864769_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005716	chr1	+	488	10	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1929.29895794711	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863431_160864118_160864150_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005717	chr1	+	415	10	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	2147.83120586532	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864693_160864735_160864857_160864886_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005727	chr1	+	445	9	NNC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2347.09346852655	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863827_160864389_160864455_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005735	chr1	+	298	7	NIC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	2109.46015342525	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005744	chr1	+	455	9	NNC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1869.76893208091	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864427_160865502_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005756	chr1	+	452	10	NNC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1776.10241891315	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863614_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005758	chr1	+	755	9	NNC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	1867.83236667534	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160864150_160864389_160864427_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005759	chr1	+	488	11	NNC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1958.72246375029	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864673_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005762	chr1	+	492	11	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2061.08743143031	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863837_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005765	chr1	+	444	8	NNC	ENSMUSG00000053332.14	novel	1066	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2276.60134267495	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862765_160863321_160863375_160863749_160863815_160864118_160864150_160864389_160864427_160865509_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005931	chr1	+	436	9	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1765.03921698641	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862826_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000005933	chr1	+	542	11	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	106	junction_1	1738.48244454754	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_160862847_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006105	chr1	+	1741	5	FSM	ENSMUSG00000026708.17	ENSMUST00000111620.10	1910	5	169	0	-14	0	multi-exon	FALSE	canonical	3	79	junction_2	18.1710621593786	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGTTATTTATTCTGTT	NA	False	NA	20	True	AATAAA	-26	NA	160898505	160913908	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_160898927_160902326_160902501_160905798_160906051_160910477_160911021_160913557
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006135	chr1	+	1464	1	Genic_Genomic	ENSMUSG00000044835.16	novel	NA	NA	NA	NA	26270	2	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTACACGTTTTCT	6908	False	NA	8	True	NA	NA	NA	160996606	160998070	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr1_+_160996600_160998100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006160	chr1	-	1441	5	NNC	ENSMUSG00000026701.16	novel	959	6	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	766.832119828062	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTTGTCATGTTTTAAAGT	NA	False	NA	-5	True	AATAAA	-16	NA	161078736	161068578	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161078587
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006161	chr1	-	1465	5	FSM	ENSMUSG00000026701.16	ENSMUST00000156678.8	913	5	3	-555	0	6	multi-exon	FALSE	canonical	2	3	junction_4	765.536209137099	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTTGTCATGTTTTAAAGT	NA	False	NA	-5	True	AATAAA	-16	NA	161078736	161068578	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161078563
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006177	chr1	+	1217	3	Intergenic	novelGene_18	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	8.5	61	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAAGCCTTCTTTGATTG	518	False	NA	NA	False	AATAAA	-23	NA	161705386	161711110	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr1_+_161705610_161708770_161709422_161710767
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006183	chr1	+	542	2	Intergenic	novelGene_19	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCAATTGTGGTGCCTG	556	False	NA	NA	False	AAAACA	-21	NA	161705424	161709164	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr1_+_161705614_161708811
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006216	chr1	-	757	5	ISM	ENSMUSG00000040225.16	ENSMUST00000028016.16	8815	35	0	47122	0	21	5prime_fragment	FALSE	canonical	3	17	junction_3	9.8488578017961	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGATGAAAACTATGGACC	3420	False	NA	NA	False	AAAAAG	-12	NA	162568119	162548092	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_162548176_162548998_162549109_162550678_162550851_162552272_162552439_162567893
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006218	chr1	-	750	5	NIC	ENSMUSG00000040225.16	novel	670	6	NA	NA	-2	21	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	13.8270568090248	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGATGAAAACTATGGACC	3418	False	NA	NA	False	AAAAAG	-12	NA	162568121	162548092	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_-_162548176_162549013_162549109_162550678_162550857_162552272_162552439_162567893
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006231	chr1	+	412	1	Intergenic	novelGene_20	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCATTGGGCTGGAGAGC	9809	False	NA	NA	False	AATAAA	-37	NA	162598020	162598432	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr1_+_162598000_162598400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006259	chr1	+	1530	2	FSM	ENSMUSG00000041396.14	ENSMUST00000045694.14	1513	2	-17	0	-17	0	multi-exon	FALSE	canonical	3	49	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGACTGTTCAATTTCT	NA	False	NA	9	True	AATAAA	-16	NA	163822440	163824812	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_163822641_163823482
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006261	chr1	+	1333	1	NIC	ENSMUSG00000041396.14	novel	1513	2	NA	NA	1022	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGACTGTTCAATTTCT	NA	False	NA	9	True	AATAAA	-16	NA	163823479	163824812	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_163823500_163824800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006270	chr1	+	1909	6	FSM	ENSMUSG00000026578.7	ENSMUST00000027867.7	1909	6	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_1	8.97552226892675	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGTCATCTTGTAG	NA	False	NA	20	True	AATAAA	-20	NA	164103153	164115416	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_164103331_164105742_164105884_164107435_164108384_164109959_164110107_164113809_164113965_164115075
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006287	chr1	+	1569	12	NIC	ENSMUSG00000026575.16	novel	1635	13	NA	NA	-14	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	38.0894987805743	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGACTTTGGTTTTATT	NA	False	NA	NA	False	AATAAA	-17	NA	164135627	164264866	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_+_164135820_164155861_164155970_164160180_164160348_164168297_164168409_164170782_164170834_164172787_164172996_164175342_164175449_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006352	chr1	-	1374	1	ISM	ENSMUSG00000026566.16	ENSMUST00000068705.13	2171	5	40908	0	12140	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTGTCTGCTTGTTTT	NA	False	NA	-1	True	AATACA	-19	NA	165421182	165419808	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_165419800_165421200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006384	chr1	+	790	4	FSM	ENSMUSG00000000544.15	ENSMUST00000027847.7	787	4	1	-4	1	4	multi-exon	FALSE	canonical	3	10	junction_3	86.0736119067085	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTTTCTCGGTGTCTA	NA	False	NA	NA	False	AATAAA	-24	NA	165957986	165981709	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_165958174_165974207_165974363_165980136_165980354_165981478
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006389	chr1	+	1288	1	ISM	ENSMUSG00000000544.15	ENSMUST00000060833.14	2515	7	34985	0	34756	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTCACCCATC	NA	False	NA	10	True	AATAAA	-19	NA	165992791	165994079	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_+_165992800_165994100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006412	chr1	-	451	1	NIC	ENSMUSG00000026558.14	novel	4731	7	NA	NA	10313	155	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTGTAACTGTACAGA	NA	False	NA	-17	True	TATAAA	-40	NA	167054091	167053640	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_-_167053600_167054100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006422	chr1	+	1222	7	NNC	ENSMUSG00000052428.11	novel	1573	7	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	195.948122386173	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTCTCCTGTTCAAAA	NA	False	NA	16	True	AATAAA	-23	NA	167136295	167158355	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_167136503_167136874_167136953_167141678_167141736_167143811_167143859_167146830_167146899_167153444_167153590_167157735
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006456	chr1	-	2105	15	FSM	ENSMUSG00000026683.15	ENSMUST00000028000.13	2068	15	-28	-9	8	9	multi-exon	TRUE	canonical	3	87	junction_14	29.0531708199618	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGATGTTGTTTCTTCG	NA	False	NA	0	True	AATAAA	-35	NA	169359025	169325870	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169356304_169356381_169358890
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006457	chr1	-	2029	14	FSM	ENSMUSG00000026683.15	ENSMUST00000111368.8	2405	14	8	368	8	9	multi-exon	FALSE	canonical	3	65	junction_13	32.5556419455247	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGATGTTGTTTCTTCG	NA	False	NA	0	True	AATAAA	-35	NA	169359025	169325870	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169358890
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006470	chr1	-	1418	8	FSM	ENSMUSG00000026675.13	ENSMUST00000111353.4	1446	8	31	-3	31	3	multi-exon	TRUE	canonical	3	56	junction_5	6.15115718331742	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTCTGTGATCTTAAC	NA	False	NA	NA	False	AATAAA	-27	NA	169796779	169783066	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_169783603_169786991_169787049_169787255_169787361_169788573_169788769_169791959_169792075_169793255_169793349_169794798_169795003_169796666
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006481	chr1	-	2105	8	ISM	ENSMUSG00000026663.7	ENSMUST00000027974.7	7246	16	52255	4017	-21145	-4017	3prime_fragment	FALSE	canonical	3	53	junction_3	13.844618788098	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATGTTCACATATATTTT	1300	False	NA	-9	True	AAAAAG	-5	NA	170643085	170536259	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_170537657_170574674_170574760_170614914_170615030_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006498	chr1	-	978	6	NNC	ENSMUSG00000026659.14	novel	1374	6	NA	NA	-3894	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	130.413802950455	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTGTGTTAGATGGTTT	NA	False	NA	-2	True	ATTAAA	-16	NA	170717003	170701756	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_170702140_170707228_170707416_170707698_170707796_170708141_170708261_170708483_170708611_170716938
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006522	chr1	-	1546	5	ISM	ENSMUSG00000026656.16	ENSMUST00000081103.12	1462	7	7561	0	-6936	0	3prime_fragment	FALSE	canonical	3	38	junction_2	18.6346451535842	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTTTCTATTTACTTTT	NA	False	NA	NA	False	AGTAAA	-17	NA	170796135	170788126	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_170788670_170788764_170788803_170793270_170793394_170794014_170794270_170795548
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006537	chr1	-	113	1	Genic_Genomic	ENSMUSG00000059498.14	novel	NA	NA	NA	NA	6773	5	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTTTGGTGACTTCTT	6609	False	NA	-2	True	AATAAA	-29	NA	170878850	170878737	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr1_-_170878700_170878800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006540	chr1	-	1229	4	ISM	ENSMUSG00000059498.14	ENSMUST00000164044.8	1347	5	779	1	-570	-1	3prime_fragment	FALSE	canonical	3	16	junction_3	67.4536878161602	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGGATCTCCTTTTGGTG	NA	False	NA	-9	True	AATAAA	-22	NA	170886193	170878744	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_170879422_170881507_170881763_170885259_170885518_170886154
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006551	chr1	-	1144	5	ISM	ENSMUSG00000058076.13	ENSMUST00000111336.10	3171	6	4781	1992	4766	250	3prime_fragment	FALSE	canonical	3	865	junction_4	43.5344691020805	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTGGAATCTAGTGACA	5237	False	NA	1	True	ATTAAA	-23	NA	170973391	170956725	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_170957475_170963561_170963726_170966262_170966325_170971126_170971229_170973324
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006564	chr1	-	972	4	NIC	ENSMUSG00000058076.13	novel	3171	6	NA	NA	4767	243	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	431.110452462269	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGACTCTTTGGAATCT	5238	False	NA	-6	True	ATTAAA	-16	NA	170973390	170956732	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_-_170957475_170966262_170966325_170971126_170971229_170973324
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006570	chr1	-	1070	5	FSM	ENSMUSG00000058076.13	ENSMUST00000081560.5	815	5	-12	-243	0	243	multi-exon	TRUE	canonical	1	3	junction_3	383.770113479411	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGACTCTTTGGAATCT	456	False	NA	-6	True	ATTAAA	-16	NA	170978172	170956732	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_170957475_170963561_170963726_170966262_170966325_170973324_170973382_170978127
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006574	chr1	-	1130	5	NNC	ENSMUSG00000058076.13	novel	3171	6	NA	NA	4767	243	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	405.15452299092	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGACTCTTTGGAATCT	5238	False	NA	-6	True	ATTAAA	-16	NA	170973390	170956732	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_170957475_170963561_170963726_170966268_170966325_170971126_170971229_170973324
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006604	chr1	+	654	4	NNC	ENSMUSG00000005681.13	novel	518	4	NA	NA	-3277	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	55.1180551180827	128	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTTGTGTCTTTGGGT	NA	False	NA	16	True	AATAAA	-22	NA	171049345	171053947	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_171049548_171052852_171052936_171053234_171053368_171053711
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006609	chr1	+	607	5	NNC	ENSMUSG00000005681.13	novel	518	4	NA	NA	-3201	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	60.9631035955356	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTTGTGTCTTTGGGT	NA	False	NA	16	True	AATAAA	-22	NA	171049421	171053947	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_171049548_171050883_171050916_171052855_171052936_171053234_171053368_171053711
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006644	chr1	+	688	1	ISM	ENSMUSG00000052423.16	ENSMUST00000111313.10	2098	9	5869	0	2697	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTGATTTCTGCAT	NA	False	NA	16	True	AATAAA	-16	NA	171103781	171104469	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_+_171103800_171104500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006658	chr1	-	1000	7	FSM	ENSMUSG00000062963.11	ENSMUST00000080001.9	1007	7	8	-1	8	1	multi-exon	FALSE	canonical	3	257	junction_6	130.826539101718	1670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGTTCTCATTGATGG	7291	False	NA	1	True	AATAAA	-19	NA	171122589	171116134	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_171116545_171116743_171116835_171117090_171117168_171117456_171117521_171117721_171117790_171122206_171122401_171122493
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006664	chr1	-	997	7	FSM	ENSMUSG00000062963.11	ENSMUST00000144576.8	822	7	-44	-131	2	0	multi-exon	FALSE	canonical	3	36	junction_3	228.930423685645	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGTTCTCATTGATG	7322	False	NA	0	True	AATAAA	-18	NA	171122558	171116135	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_171116545_171116743_171116835_171117090_171117168_171117427_171117521_171117721_171117790_171122206_171122401_171122493
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006666	chr1	-	972	7	NNC	ENSMUSG00000062963.11	novel	1007	7	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_6	220.462203865727	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGTTCTCATTGATG	7322	False	NA	0	True	AATAAA	-18	NA	171122558	171116135	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_171116545_171116743_171116835_171117090_171117168_171117456_171117521_171117721_171117790_171122206_171122401_171122489
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006679	chr1	+	947	2	Genic_Genomic	ENSMUSG00000103727.2	novel	336	1	NA	NA	-57806	38	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTAAAACAATTAAATTT	6521	False	NA	NA	False	NA	NA	NA	171132623	171190803	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr1_+_171133174_171190406
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006715	chr1	-	1374	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111289.8	3041	7	-3	1670	-3	3	multi-exon	FALSE	canonical	3	17	junction_6	46.1904270986484	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGACATGTCTTTTGG	875	False	NA	-7	True	AATATA	-11	NA	171173217	171169808	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173103
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006749	chr1	-	1288	4	FSM	ENSMUSG00000045259.5	ENSMUST00000061878.5	1558	4	1	269	1	-269	multi-exon	FALSE	canonical	3	17	junction_1	1.88561808316413	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTCTCTGAATCCTTT	7872	False	NA	NA	False	ATTAAA	-14	NA	171188365	171186282	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_171186549_171187022_171187222_171187309_171187470_171187702
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006769	chr1	+	2538	9	NNC	ENSMUSG00000038235.5	novel	2518	10	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	81.7212296468916	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTATGTTTTTTTTT	NA	False	NA	23	True	ATTAAA	-23	NA	171265073	171292171	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288544_171288768_171288975_171289130_171289234_171289372_171289485_171290456_171290509_171290626
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006780	chr1	+	482	1	FSM	ENSMUSG00000059058.8	ENSMUST00000118448.2	195	1	-21	-266	-21	266	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATACTACTGGTTTCAA	NA	False	NA	NA	False	NA	NA	NA	171538634	171539116	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_171538600_171539100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006800	chr1	-	2796	17	FSM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	99	6	99	-6	multi-exon	FALSE	canonical	3	465	junction_8	31.8580224394108	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTTGTTGTTTGGTA	9095	False	NA	44	True	ATTAAA	-15	NA	171910263	171893585	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006841	chr1	+	1454	1	Genic_Genomic	ENSMUSG00000026554.16	novel	NA	NA	NA	NA	7560	5	mono-exon	FALSE	NA	NA	NA	NA	NA	380	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGGTATGTGGTCCA	NA	False	NA	21	True	AGTAAA	-21	NA	172022507	172023961	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr1_+_172022500_172024000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006852	chr1	-	517	1	ISM	ENSMUSG00000007122.12	ENSMUST00000003554.11	1847	11	9458	0	3545	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTGTCTGTTGTTGATG	NA	False	NA	NA	False	AATAAA	-20	NA	172037977	172037460	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_172037500_172038000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006881	chr1	+	1221	4	FSM	ENSMUSG00000026548.5	ENSMUST00000027830.5	1313	4	-74	166	-74	-166	multi-exon	FALSE	canonical	1	3	junction_3	1.24721912892465	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCACCGTGCTTGATGC	NA	False	NA	NA	False	AATAAA	-19	NA	172302850	172305976	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_172303107_172303699_172304042_172304772_172305046_172305626
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006917	chr1	+	845	1	Genic_Genomic	ENSMUSG00000037860.16	novel	NA	NA	NA	NA	9918	210	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTTGCTTGTATGTATA	NA	False	NA	NA	False	NA	NA	NA	173292971	173293816	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr1_+_173293000_173293800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006930	chr1	-	1599	10	NNC	ENSMUSG00000026526.15	novel	2636	10	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	278.496758409222	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTTTTTAAAATTTAATT	821	False	NA	-16	True	AATAAA	-37	NA	175453172	175428943	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_175429133_175431503_175431658_175433620_175433749_175435382_175435587_175437202_175437369_175439712_175439896_175442302_175442476_175444094_175444206_175446616_175446752_175453016
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006953	chr1	-	692	4	ISM	ENSMUSG00000057335.12	ENSMUST00000192961.6	2708	7	-113	9981	-113	16	5prime_fragment	FALSE	canonical	3	59	junction_1	8.28653526310404	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTCTTCAGTTTCTGT	NA	False	NA	NA	False	TATAAA	-30	NA	176641746	176615939	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_176616112_176620101_176620192_176621070_176621216_176641461
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000006966	chr1	+	1376	1	FSM	ENSMUSG00000063659.12	ENSMUST00000077225.8	4944	1	3568	0	3568	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTGTGCTTTTTGTA	NA	False	NA	7	True	AATAAA	-17	NA	177276954	177278330	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_177277000_177278300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007034	chr1	-	1413	7	ISM	ENSMUSG00000055067.16	ENSMUST00000068437.13	3360	9	154436	1760	-105059	444	3prime_fragment	FALSE	canonical	3	343	junction_1	12.7758452644912	354	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCCTCCATTTATTTT	NA	False	NA	NA	False	AATACA	-31	NA	178921969	178784370	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_178785128_178799752_178799862_178871301_178871477_178877855_178877944_178913888_178914000_178920430_178920534_178921899
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007040	chr1	-	517	3	NNC	ENSMUSG00000055067.16	novel	693	3	NA	NA	-53083	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	168.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCGACTTGGCTTTGCCT	NA	False	NA	-5	True	AATAAA	-26	NA	178869993	178784814	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_178785128_178799752_178799862_178869898
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007045	chr1	-	699	5	NIC	ENSMUSG00000055067.16	novel	3210	8	NA	NA	-105057	-5	combination_of_known_splicesites	FALSE	canonical	1	7	junction_2	155.306149266537	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACTGGCGACTTGGCTT	NA	False	NA	-10	True	AATAAA	-21	NA	178921967	178784819	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_-_178785128_178799752_178799862_178913888_178914000_178920430_178920534_178921899
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007047	chr1	-	1806	2	ISM	ENSMUSG00000055067.16	ENSMUST00000068437.13	3360	9	154438	136185	-105057	-133981	internal_fragment	FALSE	canonical	3	379	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTTGGCCTGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	178921967	178918795	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_178920534_178921899
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007060	chr1	-	964	2	NNC	ENSMUSG00000026492.12	novel	458	2	NA	NA	13	305	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTACTGCACATGCGCACA	7891	False	NA	NA	False	NA	NA	NA	179373819	179356191	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_179356807_179373470
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007075	chr1	-	566	1	ISM	ENSMUSG00000010609.16	ENSMUST00000130711.8	1170	4	2496	0	1999	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTGTTTGGCCCCTTT	NA	False	NA	2	True	AATAAA	-19	NA	180055134	180054568	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_180054600_180055100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007085	chr1	+	724	1	Genic_Genomic	ENSMUSG00000026496.12	novel	NA	NA	NA	NA	1544	1	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGTGTTGTGTGCCTCAT	4643	False	NA	11	True	ATTAAA	-19	NA	180428096	180428820	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr1_+_180428100_180428800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007088	chr1	+	209	1	Intergenic	novelGene_21	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTCATTTAAACTATTAA	NA	False	NA	NA	False	NA	NA	NA	180494512	180494721	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr1_+_180494500_180494700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007108	chr1	-	1026	4	NNC	ENSMUSG00000060743.13	novel	2841	4	NA	NA	-15	132	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1201.87141112886	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTCTGGTCTTTATTA	NA	False	NA	NA	False	ATTAAA	-16	NA	180641127	180630129	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_180630759_180637681_180637836_180639363_180639515_180641035
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007120	chr1	-	1046	4	NNC	ENSMUSG00000060743.13	novel	2841	4	NA	NA	-15	132	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1200.93657895272	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTCTGGTCTTTATTA	NA	False	NA	NA	False	ATTAAA	-16	NA	180641127	180630129	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_180630771_180637673_180637836_180639363_180639515_180641035
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007123	chr1	-	1042	4	NNC	ENSMUSG00000060743.13	novel	2841	4	NA	NA	-15	132	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	1245.53629680819	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTCTGGTCTTTATTA	NA	False	NA	NA	False	ATTAAA	-16	NA	180641127	180630129	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_180630771_180637681_180637836_180639363_180639515_180641031
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007165	chr1	+	908	1	ISM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	16079	0	5106	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTGGAGTTTTTTGTT	NA	False	NA	22	True	AATAAA	-22	NA	180694770	180695678	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_+_180694800_180695700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007204	chr1	+	394	1	ISM	ENSMUSG00000026520.9	ENSMUST00000027802.9	1580	7	3402	0	1780	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTAGTCTCACTGTGTAG	2081	False	NA	32	True	NA	NA	NA	180735259	180735653	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_+_180735300_180735700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007217	chr1	+	428	1	Genic_Genomic	ENSMUSG00000038793.9	novel	NA	NA	NA	NA	1103	1	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGTTTCCTTATTT	NA	False	NA	9	True	AATAAA	-18	NA	180765538	180765966	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr1_+_180765500_180766000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007245	chr1	+	3293	5	FSM	ENSMUSG00000062169.14	ENSMUST00000134115.8	3268	5	-25	0	-25	0	multi-exon	FALSE	canonical	3	1843	junction_1	136.918543302213	3903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATTGTTCTATTGCTTG	NA	False	NA	NA	False	NA	NA	NA	180978470	180996559	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_180978627_180981299_180981369_180983423_180983537_180989639_180989781_180993745
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007247	chr1	+	554	4	FSM	ENSMUSG00000062169.14	ENSMUST00000111059.2	3127	4	5	2568	5	45	multi-exon	FALSE	canonical	3	142	junction_3	804.702429473156	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGGTGTTTTGTCTCCTC	NA	False	NA	48	True	AATAAA	-41	NA	180978500	180993991	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_180978627_180981299_180981369_180983423_180983537_180993745
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007269	chr1	+	563	2	Intergenic	novelGene_22	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATGCAGTTGAACCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	181061459	181062292	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr1_+_181061702_181061971
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007278	chr1	-	434	1	FSM	ENSMUSG00000081214.4	ENSMUST00000117444.2	333	1	-66	-35	-66	35	mono-exon	FALSE	NA	NA	NA	NA	NA	404	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCTCTTGTAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	181069951	181069517	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_181069500_181070000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007338	chr1	-	1408	2	FSM	ENSMUSG00000038633.6	ENSMUST00000132551.2	1405	2	18	-21	18	21	multi-exon	FALSE	canonical	3	1179	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTTAAAAATTGGAAATA	NA	False	NA	NA	False	NA	NA	NA	182110351	182106040	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_182107284_182110186
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007343	chr1	-	372	1	ISM	ENSMUSG00000047539.10	ENSMUST00000051431.10	4925	5	28145	0	4914	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTTTCATTCTTTCGA	NA	False	NA	-3	True	AATAAA	-17	NA	182141038	182140666	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_182140700_182141000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007394	chr1	-	208	1	NIC	ENSMUSG00000073481.10	novel	1917	8	NA	NA	5559	1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGCTATTACGTTTTTC	NA	False	NA	-9	True	AATAAA	-32	NA	184546081	184545873	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_-_184545900_184546100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007417	chr1	-	159	1	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	102623	0	102528	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGAATCACCTGTTTGC	NA	False	NA	-6	True	AATAAA	-26	NA	184629144	184628985	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_184629000_184629100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007428	chr1	-	386	2	ISM	ENSMUSG00000026618.12	ENSMUST00000153211.2	3292	4	36	6514	36	-6514	5prime_fragment	FALSE	canonical	3	317	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGACGGAATTTTGCCTT	NA	False	NA	NA	False	AAGAAA	-3	NA	185061557	185059893	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_185059940_185061217
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007434	chr1	+	2172	9	FSM	ENSMUSG00000026617.17	ENSMUST00000027916.13	2200	9	23	5	0	-5	multi-exon	FALSE	canonical	3	151	junction_6	39.6957176531676	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGTAATTGCCTTTATT	NA	False	NA	NA	False	ATTAAA	-16	NA	185064368	185089969	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007438	chr1	+	858	7	NNC	ENSMUSG00000026617.17	novel	2200	9	NA	NA	-3	2734	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	99.9566572737071	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGTGGAAGTTGATGAA	NA	False	NA	NA	False	AATAAA	-19	NA	185064373	185081635	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185081345
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007490	chr1	-	1189	5	NNC	ENSMUSG00000001305.6	novel	1321	5	NA	NA	-7	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	465.111814513457	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCTTCCCTGCTCAGA	NA	False	NA	-10	True	ATTAAA	-18	NA	186481529	186453282	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_186453744_186468312_186468512_186469784_186469883_186471798_186472061_186481360
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007494	chr1	-	1186	5	NNC	ENSMUSG00000001305.6	novel	1321	5	NA	NA	-10	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	452.661849507996	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCTTCCCTGCTCAGA	NA	False	NA	-10	True	ATTAAA	-18	NA	186481532	186453282	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_186453744_186468312_186468512_186469784_186469883_186471800_186472057_186481360
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007511	chr1	-	1793	3	FSM	ENSMUSG00000026608.14	ENSMUST00000192200.2	908	3	271	-1156	-111	0	multi-exon	FALSE	canonical	3	202	junction_2	16	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTGTCTTCAGTTATT	NA	False	NA	-2	True	ATTAAA	-20	NA	188706548	188703291	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_188704881_188706262_188706402_188706483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007515	chr1	-	449	2	Genic_Genomic	ENSMUSG00000102824.2	novel	381	1	NA	NA	-22	135	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGGGTTTTGTTATTAG	NA	False	NA	NA	False	AATAAA	-34	NA	189010042	189009504	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr1_-_189009763_189009851
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007521	chr1	-	654	3	ISM	ENSMUSG00000026603.14	ENSMUST00000130804.8	1077	6	5009	-2	-1621	0	3prime_fragment	FALSE	canonical	3	363	junction_1	3.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTTTCTGAATGTCT	NA	False	NA	-6	True	AATAAA	-17	NA	189616190	189612688	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_-_189613064_189614305_189614415_189616020
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007525	chr1	-	714	1	FSM	ENSMUSG00000093064.5	ENSMUST00000175323.5	313	1	-372	-29	-372	29	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTCCGTGGATGCCTGCT	NA	False	NA	NA	False	AATAAA	-18	NA	190215726	190215012	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_-_190215000_190215700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007541	chr1	-	1192	10	NNC	ENSMUSG00000026632.18	novel	1214	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	12.5962957517941	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTATTTTTAAAAAAGGAA	NA	False	NA	-4	True	TATAAA	-16	NA	190795101	190778038	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr1_-_190778518_190781478_190781554_190785056_190785170_190787052_190787109_190787458_190787569_190788559_190788623_190791023_190791109_190792309_190792384_190793421_190793455_190794997
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007562	chr1	+	583	1	ISM	ENSMUSG00000062510.13	ENSMUST00000078259.8	4879	6	20950	1911	20950	-1911	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTACTGTATTTTAAGGA	NA	False	NA	21	True	AATAAA	-25	NA	190816177	190816760	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr1_+_190816200_190816800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007573	chr1	+	579	2	FSM	ENSMUSG00000073478.7	ENSMUST00000139056.3	716	2	-10	147	-10	-147	multi-exon	FALSE	canonical	3	14	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTTCAGTTTCTTCTT	NA	False	NA	12	True	GATAAA	-18	NA	190956640	190957885	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr1_+_190956740_190957405
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007644	chr1	-	1351	10	NIC	ENSMUSG00000016481.16	novel	1651	10	NA	NA	-12	2	combination_of_known_junctions	FALSE	canonical	3	121	junction_9	50.3432661280975	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTGGTTCATACTTAT	NA	False	NA	1	True	AATAAA	-21	NA	194813881	194786095	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr1_-_194786216_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813809
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007671	chr10	+	1057	6	ISM	ENSMUSG00000040675.18	ENSMUST00000043735.8	3535	28	116217	-3	57081	3	3prime_fragment	FALSE	canonical	3	127	junction_5	140.137932052674	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCTAGTAAAGCCACTC	NA	False	NA	17	True	AATAAA	-22	NA	4039360	4106114	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105649
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007723	chr10	+	97	1	Intergenic	novelGene_23	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTTGTTTGTTTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	4471009	4471106	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr10_+_4471000_4471100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007734	chr10	-	1148	7	FSM	ENSMUSG00000019774.9	ENSMUST00000019908.9	2588	7	272	1168	-92	157	multi-exon	FALSE	canonical	3	26	junction_4	9.49853789918334	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGTTGTTTTATGCAAAA	NA	False	NA	2	True	TATAAA	-23	NA	5773638	5763054	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_5763407_5764040_5764178_5765551_5765670_5767448_5767613_5768800_5768985_5770024_5770105_5773525
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007745	chr10	-	735	1	Genic_Genomic	ENSMUSG00000015202.14	novel	NA	NA	NA	NA	15711	2	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGATTTTATGAATTTG	NA	False	NA	-2	True	AATAAA	-13	NA	7069795	7069060	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_-_7069100_7069800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007748	chr10	-	417	2	Antisense	novelGene_ENSMUSG00000019796.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTGTTGCTGGAGGTG	NA	False	NA	NA	False	NA	NA	NA	7495471	7492964	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr10_-_7493143_7495232
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007816	chr10	+	1392	7	ISM	ENSMUSG00000040034.16	ENSMUST00000040135.9	1286	8	219	-5	182	5	3prime_fragment	FALSE	canonical	3	1090	junction_1	90.8087122594645	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCTTGCTGCTTGCTT	NA	False	NA	25	True	AATAAA	-25	NA	7543485	7554650	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_7543889_7545316_7545395_7546702_7546884_7549348_7549485_7550769_7550922_7552003_7552127_7554331
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007834	chr10	-	1588	8	FSM	ENSMUSG00000040006.14	ENSMUST00000124838.2	1525	8	-49	-14	-23	5	multi-exon	TRUE	canonical	3	252	junction_3	35.482102415679	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTTAATTTTTGCTTG	7440	False	NA	4	True	AATAAA	-22	NA	7656704	7643705	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_7644350_7646120_7646285_7649061_7649196_7649711_7649869_7650981_7651134_7653537_7653635_7655066_7655127_7656524
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007851	chr10	+	442	1	ISM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	29236	567	22561	-567	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTACTTTTTTCTTTCTTT	6589	False	NA	15	True	AGTAAA	-20	NA	7697890	7698332	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_7697900_7698300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007857	chr10	-	173	1	Intergenic	novelGene_24	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACTTAGCTCTATTTTT	NA	False	NA	NA	False	NA	NA	NA	8435528	8435355	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr10_-_8435400_8435500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007863	chr10	+	3250	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	-10	1820	-10	714	multi-exon	FALSE	canonical	3	746	junction_2	70.5	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTTGACTTTTTGAGGGG	7582	False	NA	NA	False	AATAAA	-23	NA	11157063	11171976	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_11157245_11165263_11167317_11170960
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007885	chr10	-	407	1	NIC	ENSMUSG00000019814.6	novel	2297	11	NA	NA	13430	-452	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGCTCATTTATTTG	5686	False	NA	-14	True	GATAAA	-34	NA	13054742	13054335	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_13054300_13054700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007894	chr10	+	271	1	ISM	ENSMUSG00000019810.16	ENSMUST00000121465.3	5741	7	14801	2963	9765	529	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTACTGGTATGAATT	NA	False	NA	NA	False	NA	NA	NA	13391545	13391816	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_13391500_13391800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007896	chr10	-	2110	12	FSM	ENSMUSG00000019809.17	ENSMUST00000019945.15	2129	12	19	0	0	0	multi-exon	FALSE	canonical	3	96	junction_6	16.7987602848376	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTTAGCCATTAATTT	NA	False	NA	NA	False	AATAAA	-34	NA	13428864	13399859	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428569
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007913	chr10	-	1248	5	FSM	ENSMUSG00000019806.14	ENSMUST00000105534.10	617	5	-16	-615	-9	0	multi-exon	FALSE	canonical	2	6	junction_1	50.8742321809381	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGTCTGCACTGTTCA	NA	False	NA	0	True	AATAAA	-17	NA	13744582	13522797	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_13523451_13566267_13566384_13677591_13677694_13704986_13705143_13744361
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007939	chr10	+	420	1	Genic_Genomic	ENSMUSG00000111888.2	novel	NA	NA	NA	NA	6450	328	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTATTACGCCTATTT	NA	False	NA	NA	False	AATAAA	-21	NA	14426683	14427103	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_+_14426700_14427100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007976	chr10	+	489	2	NNC	ENSMUSG00000112227.2	novel	628	3	NA	NA	-82	-55	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGCTGACTTTTAATAAAA	NA	False	NA	NA	False	AATAAA	-23	NA	15667442	15682758	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_15667792_15682618
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000007989	chr10	-	710	3	FSM	ENSMUSG00000078453.4	ENSMUST00000218994.2	425	3	-17	-268	-17	4	multi-exon	FALSE	canonical	1	1	junction_2	71	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGCTGTGTTTTGTCA	NA	False	NA	0	True	AATAAA	-26	NA	17898643	17887003	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_17887565_17894586_17894654_17898561
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008004	chr10	-	1181	6	FSM	ENSMUSG00000059554.13	ENSMUST00000080860.13	1190	6	9	0	-9	0	multi-exon	FALSE	canonical	3	48	junction_2	8.9977775033616	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTTTCTGTTTAGAA	NA	False	NA	0	True	AATAAA	-21	NA	18110735	18089423	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_18089927_18092007_18092031_18095235_18095391_18100644_18100809_18106166_18106367_18110599
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008033	chr10	-	167	1	Intergenic	novelGene_25	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGTGAATTTAGTG	NA	False	NA	NA	False	NA	NA	NA	19443346	19443179	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr10_-_19443200_19443300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008074	chr10	+	275	1	Intergenic	novelGene_26	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGCCAATCTCAGTAC	7354	False	NA	35	True	AATAAA	-36	NA	20237144	20237419	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr10_+_20237100_20237400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008088	chr10	+	356	1	ISM	ENSMUSG00000019977.17	ENSMUST00000020153.10	2793	18	72564	0	1142	0	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTATTTCTTAGACA	8959	False	NA	27	True	AATAAA	-29	NA	21244441	21244797	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_21244400_21244800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008103	chr10	+	2440	12	FSM	ENSMUSG00000019970.16	ENSMUST00000020145.12	2456	12	16	0	-1	0	multi-exon	FALSE	canonical	3	717	junction_1	88.4218850289119	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATGTGTTAACTTT	NA	False	NA	18	True	AATAAA	-24	NA	21870580	21875802	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008105	chr10	+	2436	12	NNC	ENSMUSG00000019970.16	novel	2456	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	278.231694875077	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATGTGTTAACTTT	NA	False	NA	18	True	AATAAA	-24	NA	21870581	21875802	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874146_21874558
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008124	chr10	-	623	3	Intergenic	novelGene_27	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	58.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGGTGTCAGTGGCTC	NA	False	NA	-24	True	AGTAAA	-13	NA	21934539	21930760	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr10_-_21931017_21933427_21933504_21934248
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008133	chr10	+	612	3	Antisense	novelGene_ENSMUSG00000069712.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGTATACAAATGCATTA	NA	False	NA	NA	False	NA	NA	NA	21934771	21949763	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr10_+_21934857_21940036_21940260_21949459
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008157	chr10	+	1315	7	NNC	ENSMUSG00000078452.11	novel	1271	7	NA	NA	-18	4	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	16.5672032106274	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTCCAGAAGTTTATAT	NA	False	NA	NA	False	AATAAA	-19	NA	22237774	22250042	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_22237831_22238169_22238261_22238586_22238705_22246764_22247014_22247265_22247530_22248087_22248258_22249675
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008175	chr10	-	1104	7	FSM	ENSMUSG00000071359.14	ENSMUST00000095794.4	1195	7	97	-6	97	6	multi-exon	FALSE	canonical	3	4	junction_6	96.5702104976248	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCTTCATATCCATTCT	NA	False	NA	-9	True	AATAAA	-14	NA	22607740	22581273	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587991_22607681
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008194	chr10	-	621	5	FSM	ENSMUSG00000061983.8	ENSMUST00000220070.2	494	5	-112	-15	1	0	multi-exon	FALSE	canonical	3	3174	junction_1	596.623153674076	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTTGCTGGTATAA	NA	False	NA	-3	True	AATAAA	-28	NA	23663099	23661080	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_23661172_23661473_23661576_23661799_23661903_23662661_23662779_23662891
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008197	chr10	-	513	6	NNC	ENSMUSG00000061983.8	novel	584	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1586.65439210938	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTTGCTGGTATAA	NA	False	NA	-3	True	AATAAA	-28	NA	23663098	23661080	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_23661172_23661473_23661576_23661799_23661903_23662657_23662779_23662891_23662943_23663053
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008198	chr10	-	519	5	NNC	ENSMUSG00000061983.8	novel	584	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	1861.54834747852	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTTGCTGGTATAA	NA	False	NA	-3	True	AATAAA	-28	NA	23663098	23661080	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_23661172_23661473_23661576_23661799_23661903_23662661_23662779_23662992
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008201	chr10	-	643	6	NNC	ENSMUSG00000061983.8	novel	584	6	NA	NA	2	0	intron_retention	FALSE	canonical	3	19	junction_4	1824.56125136976	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTTGCTGGTATAA	NA	False	NA	-3	True	AATAAA	-28	NA	23663098	23661080	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_23661172_23661473_23661576_23661799_23661903_23662522_23662774_23662891_23662943_23663053
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008202	chr10	-	499	6	NNC	ENSMUSG00000061983.8	novel	584	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1685.9797863557	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTTGCTGGTATAA	NA	False	NA	-3	True	AATAAA	-28	NA	23663098	23661080	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_23661172_23661473_23661576_23661799_23661903_23662661_23662779_23662891_23662933_23663053
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008204	chr10	-	500	6	NNC	ENSMUSG00000061983.8	novel	584	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1703.54308428052	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTTGCTGGTATAA	NA	False	NA	-3	True	AATAAA	-28	NA	23663098	23661080	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_23661172_23661482_23661576_23661799_23661903_23662661_23662779_23662891_23662943_23663053
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008206	chr10	-	1492	4	NIC	ENSMUSG00000061983.8	novel	584	6	NA	NA	2	0	intron_retention	FALSE	canonical	3	2594	junction_3	461.374757292449	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTTGCTGGTATAA	NA	False	NA	-3	True	AATAAA	-28	NA	23663098	23661080	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_23661172_23661473_23662779_23662891_23662943_23663053
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008209	chr10	-	517	6	NNC	ENSMUSG00000061983.8	novel	584	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	1675.75719004873	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTTGCTGGTATAA	NA	False	NA	-3	True	AATAAA	-28	NA	23663098	23661080	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_23661172_23661473_23661576_23661799_23661903_23662661_23662779_23662883_23662943_23663053
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008211	chr10	-	733	5	NIC	ENSMUSG00000061983.8	novel	584	6	NA	NA	2	0	intron_retention	FALSE	canonical	3	2594	junction_4	656.163660987105	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTTGCTGGTATAA	NA	False	NA	-3	True	AATAAA	-28	NA	23663098	23661080	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_23661172_23661473_23661903_23662661_23662779_23662891_23662943_23663053
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008213	chr10	-	497	6	NNC	ENSMUSG00000061983.8	novel	584	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1703.54308428052	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTTGCTGGTATAA	NA	False	NA	-3	True	AATAAA	-28	NA	23663098	23661080	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_23661172_23661485_23661576_23661799_23661903_23662661_23662779_23662891_23662943_23663053
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008268	chr10	-	1783	3	FSM	ENSMUSG00000061983.8	ENSMUST00000220171.2	1795	3	2	10	2	4	multi-exon	FALSE	canonical	3	2594	junction_2	565	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTTGTATTTCTTGTT	NA	False	NA	-14	True	AATAAA	-17	NA	23663098	23661091	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_23662779_23662891_23662943_23663053
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008272	chr10	-	2007	1	FSM	ENSMUSG00000070063.3	ENSMUST00000093556.3	129	1	-1725	-153	-1725	153	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTTGTATTTCTTGTT	NA	False	NA	-14	True	AATAAA	-17	NA	23663098	23661091	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_23661100_23663100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008285	chr10	-	1592	3	NIC	ENSMUSG00000061983.8	novel	584	6	NA	NA	2	2	intron_retention	FALSE	canonical	3	2594	junction_2	290	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTCTTGTATTTCTTG	NA	False	NA	-16	True	AATAAA	-15	NA	23663098	23661093	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_23661172_23661473_23662943_23663053
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008301	chr10	-	789	5	NIC	ENSMUSG00000061983.8	novel	490	7	NA	NA	2	-139	intron_retention	FALSE	canonical	3	98	junction_2	1726.07218490421	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGGAAGACTGAATCAAAT	NA	False	NA	-5	True	NA	NA	NA	23663098	23661241	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_23661576_23661799_23661903_23662522_23662779_23662891_23662943_23663053
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008323	chr10	-	383	3	NNC	ENSMUSG00000087400.9	novel	797	2	NA	NA	-8053	74	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGGTTTTAGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	24434291	24425264	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_24425486_24426402_24426540_24434266
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008340	chr10	-	973	6	NNC	ENSMUSG00000039166.17	novel	2092	8	NA	NA	21014	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	50.2736511504784	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGTTCTTACAGTTTC	NA	False	NA	NA	False	ATTAAA	-20	NA	25150984	25046021	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_25046301_25096508_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25150849
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008388	chr10	+	1234	2	NNC	ENSMUSG00000110831.2	novel	1113	2	NA	NA	79399	84910	intron_retention	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTTTTGAGCCAAT	NA	False	NA	NA	False	AAGAAA	-41	NA	29490111	29575377	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_29490625_29574656
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008390	chr10	-	651	2	NNC	ENSMUSG00000069682.7	novel	365	2	NA	NA	-1	31043	intron_retention	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACTATCAGTCAGTTAT	NA	False	NA	NA	False	NA	NA	NA	29575377	29543698	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_29543717_29574744
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008399	chr10	-	558	2	NNC	ENSMUSG00000069682.7	novel	365	2	NA	NA	-1	11	intron_retention	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATAGACTTCCTATATAC	NA	False	NA	3	True	AATAAA	-32	NA	29575377	29574730	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_29574897_29574985
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008410	chr10	-	547	2	NNC	ENSMUSG00000069682.7	novel	365	2	NA	NA	-1	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATAGACTTCCTATATAC	NA	False	NA	3	True	AATAAA	-32	NA	29575377	29574730	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_29575077_29575176
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008429	chr10	-	139	1	ISM	ENSMUSG00000075266.6	ENSMUST00000216853.2	4143	2	3264	2521	3264	-1081	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCTGAGTTTCTTTTG	NA	False	NA	1	True	ATTAAA	-30	NA	30073224	30073085	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_-_30073100_30073200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008441	chr10	-	1733	12	NIC	ENSMUSG00000019792.9	novel	2359	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	52.8487628572059	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGATACTCAGTATTT	NA	False	NA	-2	True	AATAAA	-23	NA	30476691	30410710	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30470110_30470185_30473735_30473802_30476585
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008471	chr10	+	852	6	NNC	ENSMUSG00000000295.14	novel	858	6	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	199.806506400567	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTGTCTTCTGTTTTGC	NA	False	NA	20	True	ATTAAA	-27	NA	31189381	31204200	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_31189480_31190510_31190633_31192288_31192392_31196266_31196333_31202017_31202157_31203876
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008548	chr10	-	475	3	NNC	ENSMUSG00000111149.2	novel	378	3	NA	NA	-34	693	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	46	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCTCGGTCTCTTTCT	NA	False	NA	-1	True	NA	NA	NA	34109561	34106209	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_34106388_34106902_34107041_34109402
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008549	chr10	-	590	4	NNC	ENSMUSG00000111149.2	novel	378	3	NA	NA	-37	693	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	34.8361242901037	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCTCGGTCTCTTTCT	NA	False	NA	-1	True	NA	NA	NA	34109564	34106209	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_34106388_34106902_34107068_34107314_34107400_34109402
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008567	chr10	-	2730	12	FSM	ENSMUSG00000039480.15	ENSMUST00000047885.14	2743	12	13	0	0	0	multi-exon	FALSE	canonical	3	63	junction_7	12.7305190664984	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTGTATTATTGAATA	NA	False	NA	-1	True	AATAAA	-17	NA	34294535	34179604	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274195_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008576	chr10	-	558	2	FSM	ENSMUSG00000111753.2	ENSMUST00000214107.2	555	2	0	-3	0	3	multi-exon	FALSE	canonical	1	1	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGACTTAGTTCCATTTT	NA	False	NA	NA	False	NA	NA	NA	35361392	35354819	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_35355139_35361153
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008578	chr10	-	1917	1	FSM	ENSMUSG00000063953.4	ENSMUST00000080898.4	3218	1	-1	1302	-1	-1302	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTTGCTTGTTTTATG	NA	False	NA	NA	False	ATTAAA	-39	NA	35587889	35585972	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_35586000_35587900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008587	chr10	-	184	1	Genic_Genomic	ENSMUSG00000069662.6	novel	NA	NA	NA	NA	5365	3	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGTGTTATTAAGTCTG	NA	False	NA	0	True	AATAAA	-19	NA	37009551	37009367	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_-_37009400_37009600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008593	chr10	+	1044	3	NNC	ENSMUSG00000046463.6	novel	1791	3	NA	NA	1350	2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	8.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	False	NA	6	True	NA	NA	NA	37018434	37027313	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_37018518_37024872_37025003_37026482
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008615	chr10	+	364	1	ISM	ENSMUSG00000019843.15	ENSMUST00000063091.13	3562	14	195254	0	31748	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTATTTGTGTACA	NA	False	NA	NA	False	ATTAAA	-30	NA	39441013	39441377	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_39441000_39441400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008636	chr10	-	1195	9	NIC	ENSMUSG00000038510.13	novel	1296	10	NA	NA	-4	-67	combination_of_known_splicesites	FALSE	canonical	3	32	junction_7	393.075374451262	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTTTGGATCATACTC	6553	False	NA	1	True	TTTAAA	-11	NA	40123036	40099489	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40120580_40120714_40122948
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008663	chr10	+	213	1	FSM	ENSMUSG00000106147.3	ENSMUST00000196710.3	213	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTATATTTAGTTGAA	NA	False	NA	NA	False	NA	NA	NA	40134462	40134675	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_40134500_40134700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008664	chr10	-	3221	8	FSM	ENSMUSG00000075232.7	ENSMUST00000238969.2	3206	8	-11	-4	-11	4	multi-exon	FALSE	canonical	3	315	junction_3	48.542848734549	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGTTTGGTGTCTAC	NA	False	NA	-1	True	AATAAA	-33	NA	40178195	40163449	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_40165466_40166113_40166270_40166373_40166612_40167989_40168033_40169159_40169263_40170176_40170304_40170712_40170800_40177744
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008678	chr10	-	258	1	ISM	ENSMUSG00000038446.9	ENSMUST00000044166.9	3534	15	51433	0	14059	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGAGTTCATTGTG	NA	False	NA	-3	True	AATAAA	-19	NA	40707874	40707616	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_-_40707600_40707900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008681	chr10	-	136	1	Intergenic	novelGene_28	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGTCTCAGTTGGAAAGT	NA	False	NA	NA	False	TTTAAA	-27	NA	40763169	40763033	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr10_-_40763000_40763200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008690	chr10	-	519	2	Antisense	novelGene_ENSMUSG00000091415.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTTCAGGCGAGAGGAA	NA	False	NA	NA	False	NA	NA	NA	41291449	41290806	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr10_-_41291079_41291202
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008704	chr10	-	1654	10	FSM	ENSMUSG00000019822.13	ENSMUST00000019965.13	1602	10	-52	0	-23	0	multi-exon	FALSE	canonical	3	150	junction_9	17.8020667408847	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTCTACCTTGTTCCTT	NA	False	NA	0	True	AATAAA	-20	NA	41366388	41363167	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_41363579_41363667_41363822_41363988_41364094_41364172_41364306_41364428_41364512_41364729_41364820_41364926_41365021_41365270_41365348_41365459_41365557_41365978
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008715	chr10	+	891	6	NNC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	28	2	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_5	639.254753599846	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTGTGGCTGTCGTCTTT	NA	False	NA	6	True	TTTAAA	-15	NA	41395437	41405044	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404670
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008728	chr10	-	872	1	ISM	ENSMUSG00000019813.17	ENSMUST00000105505.10	2071	9	26219	1	3199	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	NA	False	NA	4	True	AATAAA	-25	NA	41595708	41594836	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_-_41594800_41595700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008737	chr10	-	2272	12	FSM	ENSMUSG00000019813.17	ENSMUST00000186239.7	2255	12	-17	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	75.4430440303278	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	367	False	NA	4	True	AATAAA	-25	NA	41685626	41594836	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41657479_41657547_41685568
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008754	chr10	-	1132	3	FSM	ENSMUSG00000071324.12	ENSMUST00000162405.8	1135	3	3	0	3	0	multi-exon	FALSE	canonical	3	5	junction_2	0.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGAATCCTGAGTCTCATC	NA	False	NA	NA	False	AATAAA	-33	NA	41894373	41875803	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_41876495_41887763_41888020_41894188
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008781	chr10	+	1205	4	NNC	ENSMUSG00000019804.13	novel	1401	4	NA	NA	-59	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1065.69820618535	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGCTCTGGTTGC	NA	False	NA	12	True	AATAAA	-13	NA	42378226	42411366	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_42378489_42401949_42402046_42409144_42409274_42410648
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008787	chr10	+	1091	3	FSM	ENSMUSG00000019804.13	ENSMUST00000105499.2	1057	3	-45	11	-45	0	multi-exon	FALSE	canonical	3	200	junction_1	903	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGCTCTGGTTGC	NA	False	NA	12	True	AATAAA	-13	NA	42378240	42411366	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_42378489_42409144_42409270_42410648
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008816	chr10	+	983	2	Antisense	novelGene_ENSMUSG00000094955.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCCTAATTTTTAAACAT	NA	False	NA	NA	False	NA	NA	NA	43249425	43332536	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr10_+_43249954_43332081
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008826	chr10	+	316	1	Genic_Genomic	ENSMUSG00000038240.14	novel	NA	NA	NA	NA	46373	7	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGCCTTTCTTTCTTA	NA	False	NA	NA	False	ATTAAA	-35	NA	43316289	43316605	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_+_43316300_43316600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008830	chr10	-	448	1	FSM	ENSMUSG00000094955.3	ENSMUST00000178135.3	75	1	-39	-334	-39	334	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGACTGGGCATGGTGG	NA	False	NA	NA	False	NA	NA	NA	43332536	43332088	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_43332100_43332500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008832	chr10	+	477	2	FSM	ENSMUSG00000045886.8	ENSMUST00000216543.2	456	2	-22	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTCGGTGGTCATGGTG	NA	False	NA	NA	False	AATAAA	-44	NA	43400079	43400640	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_43400172_43400255
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008835	chr10	+	563	1	FSM	ENSMUSG00000045886.8	ENSMUST00000057649.8	563	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGGTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	43400079	43400642	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_43400100_43400600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008838	chr10	-	667	1	Genic_Genomic	ENSMUSG00000019797.12	novel	NA	NA	NA	NA	434	390	mono-exon	FALSE	NA	NA	NA	NA	NA	1330	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTTTGTTTTATTGTTG	NA	False	NA	NA	False	AATACA	-18	NA	43401405	43400738	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_-_43400700_43401400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008962	chr10	+	1008	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	140	1053	140	0	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	251	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTTGTAAAGGTGTTGT	1661	False	NA	52	True	ATTAAA	-23	NA	53473187	53484268	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008972	chr10	+	1659	2	Genic_Genomic	ENSMUSG00000112825.2	novel	754	1	NA	NA	-142936	3	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAACATTCCTGGGCAC	5518	False	NA	NA	False	AAAAAG	-3	NA	56230500	56374193	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_+_56231204_56373237
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000008977	chr10	+	1613	2	Genic_Genomic	ENSMUSG00000112825.2	novel	754	1	NA	NA	-142936	1	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCATTGAACATTCCTGGGC	5518	False	NA	NA	False	AAAAAG	-1	NA	56230500	56374191	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_+_56231229_56373306
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009016	chr10	+	1055	4	ISM	ENSMUSG00000038010.10	ENSMUST00000036576.10	2455	16	46979	0	46722	0	3prime_fragment	FALSE	canonical	3	47	junction_1	2.62466929133727	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTAGAGTCCCTTCTTT	5593	False	NA	NA	False	AATAAA	-24	NA	58380748	58412066	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_58380932_58397722_58397900_58409410_58409550_58411510
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009019	chr10	+	208	1	Intergenic	novelGene_29	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGTCTGGTTCCCAGCA	30	False	NA	NA	False	NA	NA	NA	58394418	58394626	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr10_+_58394400_58394600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009029	chr10	+	558	1	ISM	ENSMUSG00000019916.15	ENSMUST00000009789.15	4043	15	48111	1340	48039	8	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGGTATTTTCATGT	NA	False	NA	26	True	AAAAAG	-3	NA	59207228	59207786	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_59207200_59207800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009038	chr10	+	1142	2	Genic_Genomic	ENSMUSG00000069622.6	novel	630	1	NA	NA	-138	54169	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTGAAGAACTGACTATG	1364	False	NA	NA	False	AATAGA	-35	NA	59231438	59286375	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_+_59232563_59286357
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009075	chr10	-	932	1	NIC	ENSMUSG00000020107.11	novel	1852	4	NA	NA	1544	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGCTGTGCGTATCCTTT	NA	False	NA	-4	True	AATAAA	-18	NA	59824661	59823729	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_59823700_59824700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009109	chr10	+	830	4	FSM	ENSMUSG00000020098.8	ENSMUST00000020298.8	789	4	-36	-5	-8	5	multi-exon	FALSE	canonical	3	60	junction_3	1.24721912892465	269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTAGAACCTTCTTTTC	NA	False	NA	11	True	AATAAA	-22	NA	60925101	60930108	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_60925196_60927842_60927975_60928382_60928464_60929585
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009156	chr10	+	1341	11	NNC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1205.82194373796	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTAGGATAGTTTCT	2072	False	NA	15	True	AATAAA	-16	NA	61484350	61509947	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499564_61501129_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009177	chr10	+	355	1	Genic_Genomic	ENSMUSG00000020089.9	novel	NA	NA	NA	NA	10129	4	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAGGATAGTTTCTTATT	NA	False	NA	19	True	AATAAA	-20	NA	61509596	61509951	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_+_61509600_61510000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009189	chr10	+	863	8	NIC	ENSMUSG00000020088.11	novel	897	8	NA	NA	7	4	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	576.708322981313	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGCTTCCTCATGGAC	NA	False	NA	30	True	AATAAA	-26	NA	61516115	61527226	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_+_61516193_61519839_61519967_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009200	chr10	+	1467	10	FSM	ENSMUSG00000020085.16	ENSMUST00000067857.11	1442	10	-24	-1	0	1	multi-exon	FALSE	canonical	3	36	junction_9	41.9205597927	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGATCCTCCTCCTTCGC	NA	False	NA	NA	False	AATAAA	-22	NA	61551065	61575040	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361_61572538_61574806
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009201	chr10	+	1490	10	FSM	ENSMUSG00000020085.16	ENSMUST00000105455.9	1512	10	24	-2	0	2	multi-exon	FALSE	canonical	3	49	junction_9	38.6497408676411	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGGAGCTTTTATTTTTT	NA	False	NA	10	True	AATAAA	-21	NA	61551065	61574434	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361_61572538_61574177
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009220	chr10	+	236	1	Genic_Genomic	ENSMUSG00000020085.16	novel	NA	NA	NA	NA	10878	1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGATCCTCCTCCTTCGC	NA	False	NA	NA	False	AATAAA	-22	NA	61574804	61575040	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_+_61574800_61575000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009264	chr10	-	1213	4	FSM	ENSMUSG00000020083.14	ENSMUST00000125704.8	1769	4	13	543	13	12	multi-exon	FALSE	canonical	3	105	junction_3	8.33999733546454	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGACTCACGGCTGCCC	NA	False	NA	2	True	AATAAA	-33	NA	61946816	61943976	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_61944903_61945662_61945792_61946014_61946094_61946737
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009325	chr10	-	2256	1	Genic_Genomic	ENSMUSG00000020075.9	novel	NA	NA	NA	NA	7675	4	mono-exon	FALSE	NA	NA	NA	NA	NA	507	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGGTGGCTTTTATTT	4156	False	NA	-1	True	AATAAA	-22	NA	62418281	62416025	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_-_62416000_62418300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009331	chr10	+	173	1	Intergenic	novelGene_30	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACCCCGAAATTATACA	2155	False	NA	NA	False	NA	NA	NA	62434807	62434980	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr10_+_62434800_62435000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009345	chr10	-	679	6	NNC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	1	-1582	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	144.804696056447	31	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAACTTGTTGCTGTTCCA	NA	False	NA	NA	False	NA	NA	NA	62628064	62617826	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_62618072_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009362	chr10	+	1489	1	Genic_Genomic	ENSMUSG00000071253.9	novel	NA	NA	NA	NA	2570	2	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGGCTTGGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	62780790	62782279	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_+_62780800_62782300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009376	chr10	-	1485	10	NNC	ENSMUSG00000020069.17	novel	2168	10	NA	NA	5	4	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_9	155.339612017439	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTGCTACTTTTTATA	5786	False	NA	-2	True	AATAAA	-19	NA	62859668	62851202	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62854538_62854678_62855171_62855307_62859416
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009431	chr10	-	345	3	ISM	ENSMUSG00000020063.17	ENSMUST00000020257.13	3905	9	408	16703	408	-4320	5prime_fragment	FALSE	canonical	3	191	junction_2	12	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATCAATACAATTGAAGAT	NA	False	NA	20	True	AAAAAG	-6	NA	63174403	63171488	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_-_63171657_63172758_63172876_63174343
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009449	chr10	-	303	1	Intergenic	novelGene_31	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGACTTTCTTTGTCCT	NA	False	NA	NA	False	NA	NA	NA	66805789	66805486	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr10_-_66805500_66805800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009455	chr10	-	867	8	FSM	ENSMUSG00000019873.9	ENSMUST00000020023.9	5430	8	75	4488	-24	-2005	multi-exon	FALSE	canonical	3	113	junction_7	23.5068379109447	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTAACCTGATGTATTC	NA	False	NA	-5	True	AATAAA	-21	NA	66932649	66849455	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009489	chr10	+	696	2	Intergenic	novelGene_32	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTATCTCTGCTTTGT	NA	False	NA	NA	False	AATAAA	-36	NA	69131957	69146287	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr10_+_69132082_69145715
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009532	chr10	+	465	1	ISM	ENSMUSG00000048701.14	ENSMUST00000147545.8	5511	9	95615	0	17689	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGGAACTGTCAAATTT	2273	False	NA	9	True	AATAAA	-20	NA	70028565	70029030	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_70028600_70029000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009569	chr10	-	1389	7	FSM	ENSMUSG00000019927.7	ENSMUST00000020085.7	1431	7	42	0	-2	0	multi-exon	FALSE	canonical	3	135	junction_2	5.39804491356722	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTTGACTACTTAATGCA	NA	False	NA	0	True	AATAAA	-18	NA	71121050	71090809	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_71091705_71092444_71092539_71094030_71094137_71095571_71095650_71097913_71097946_71098028_71098093_71120930
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009573	chr10	-	1052	3	FSM	ENSMUSG00000037710.9	ENSMUST00000045887.9	1084	3	32	0	32	0	multi-exon	FALSE	canonical	3	1606	junction_1	82	7831	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGCTCTGTAACGG	1285	False	NA	7	True	AATAAA	-27	NA	71180752	71166309	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_71166957_71172043_71172250_71180553
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009591	chr10	+	627	1	ISM	ENSMUSG00000060733.14	ENSMUST00000079252.13	5447	6	35772	1724	1786	-1724	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGTTGCATAAATTATA	NA	False	NA	15	True	AATAAA	-29	NA	71219364	71219991	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_71219400_71220000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009592	chr10	+	1843	8	FSM	ENSMUSG00000019923.15	ENSMUST00000020081.11	1834	8	-3	-6	-3	6	multi-exon	FALSE	canonical	3	928	junction_7	94.1772102940808	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTTGCATTTTGTAT	NA	False	NA	16	True	AATAAA	-29	NA	72490673	72510802	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72509797
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009596	chr10	+	1173	8	FSM	ENSMUSG00000019923.15	ENSMUST00000160337.2	1138	8	-24	-11	-23	11	multi-exon	FALSE	canonical	3	212	junction_7	327.562862014955	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTGTTATAGCACAAT	NA	False	NA	24	True	ATTAAA	-25	NA	72490703	72505008	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72504643
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009611	chr10	+	1044	1	ISM	ENSMUSG00000019923.15	ENSMUST00000105431.8	2676	8	13227	624	11878	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTGATGTTGTTGT	NA	False	NA	13	True	ATTAAA	-14	NA	72503953	72504997	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_72504000_72505000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009623	chr10	-	978	2	Intergenic	novelGene_33	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACCCGTTTCTTGTGGG	NA	False	NA	NA	False	NA	NA	NA	74555248	74550613	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr10_-_74551462_74555118
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009647	chr10	+	653	4	NNC	ENSMUSG00000020180.11	novel	3036	4	NA	NA	4	55	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1721.43667389254	282	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTTTTTGTTTTGTTTTG	1869	False	NA	40	True	AATAAA	-27	NA	75353851	75371307	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_75353952_75355147_75355295_75368010_75368204_75371094
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009666	chr10	+	218	1	NIC	ENSMUSG00000020180.11	novel	3036	4	NA	NA	17216	58	mono-exon	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTTGTTTTGTTT	NA	False	NA	43	True	AATAAA	-30	NA	75371092	75371310	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_+_75371100_75371300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009706	chr10	-	1894	5	FSM	ENSMUSG00000001665.12	ENSMUST00000001715.10	1880	5	-14	0	-14	0	multi-exon	FALSE	canonical	3	19	junction_4	2.34520787991171	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTGCTTCTGGATCCT	NA	False	NA	5	True	AATAAA	-23	NA	75617262	75609948	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_75610845_75611704_75611882_75612577_75612729_75613934_75614023_75616680
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009788	chr10	+	387	2	Intergenic	novelGene_34	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTTGATCTGCAGTAC	NA	False	NA	NA	False	AATAAA	-24	NA	75715148	75718705	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr10_+_75715267_75718436
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009793	chr10	+	1321	7	FSM	ENSMUSG00000009092.6	ENSMUST00000009236.6	1321	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	4.01732359773132	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGACTCAATATGTTAGT	NA	False	NA	NA	False	NA	NA	NA	75729246	75731775	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_75729352_75729452_75729519_75729603_75729678_75729800_75729895_75730265_75730462_75730872_75730964_75731080
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009799	chr10	-	1660	9	FSM	ENSMUSG00000000902.14	ENSMUST00000000925.10	1660	9	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_7	283.203990084886	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCAGTAGCATAAAACTG	6861	False	NA	-2	True	AATAAA	-20	NA	75757451	75732602	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752606_75752746_75757136
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009810	chr10	-	637	1	NIC	ENSMUSG00000000901.18	novel	335	2	NA	NA	135	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCTGTCTGTTTTTCTTT	4620	False	NA	-3	True	ATTAAA	-17	NA	75759692	75759055	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_75759100_75759700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009841	chr10	+	523	2	FSM	ENSMUSG00000049422.8	ENSMUST00000219435.2	405	2	-115	-3	-115	0	multi-exon	FALSE	canonical	3	16591	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGCCCATTTA	8478	False	NA	23	True	ATTAAA	-20	NA	75772938	75773581	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_75773289_75773408
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009845	chr10	+	174	1	NIC	ENSMUSG00000049422.8	novel	1488	5	NA	NA	354	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGCCCATTTA	8947	False	NA	23	True	ATTAAA	-20	NA	75773407	75773581	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_+_75773400_75773600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009869	chr10	-	885	2	NNC	ENSMUSG00000085662.2	novel	405	2	NA	NA	-49	520	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGGGCTCTCTGCTA	7544	False	NA	NA	False	AATAAA	-21	NA	75829875	75828004	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_75828750_75829735
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009909	chr10	+	745	1	ISM	ENSMUSG00000033105.13	ENSMUST00000048678.7	4667	22	21584	1544	920	702	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCCTTCCTGAGACAT	182	False	NA	7	True	AATAAA	-15	NA	76389024	76389769	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_76389000_76389800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009915	chr10	-	1051	3	NNC	ENSMUSG00000112143.2	novel	2014	5	NA	NA	40272	-440	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGGCTTCTTGTCTTTT	NA	False	NA	NA	False	AATACA	-1	NA	76804131	76800926	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_76801816_76802193_76802285_76804060
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000009978	chr10	+	2008	6	FSM	ENSMUSG00000009293.18	ENSMUST00000174510.8	2031	6	26	-3	-12	3	multi-exon	FALSE	canonical	3	276	junction_5	14.0427917452336	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTGGTGCTCACTT	116	False	NA	8	True	AATAAA	-21	NA	77458134	77481830	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_77458251_77466559_77466596_77466682_77466729_77477293_77477413_77479302_77479444_77480280
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010000	chr10	-	308	1	ISM	ENSMUSG00000053329.8	ENSMUST00000001242.9	1378	7	7409	0	5069	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGTCTCAGGCCTTGTG	NA	False	NA	-2	True	AATAAA	-29	NA	77998207	77997899	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_-_77997900_77998200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010013	chr10	-	103	1	ISM	ENSMUSG00000001211.16	ENSMUST00000001240.12	5980	10	80786	2376	6780	9	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTCTTTTTCCTTCA	NA	False	NA	-4	True	AATAAA	-14	NA	78107490	78107387	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_-_78107400_78107500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010084	chr10	+	136	1	ISM	ENSMUSG00000032763.12	ENSMUST00000105384.5	2329	16	9867	0	536	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTATACTGGTTTATT	NA	False	NA	30	True	AATAAA	-39	NA	78420200	78420336	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_78420200_78420300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010095	chr10	-	1587	6	FSM	ENSMUSG00000052151.13	ENSMUST00000163602.9	1609	6	17	5	-3	0	multi-exon	FALSE	canonical	3	7	junction_5	21.5462293684997	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCATGCATGTTGATTT	NA	False	NA	-5	True	TATAAA	-17	NA	79369609	79362268	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_79363083_79363283_79363461_79363648_79363707_79366331_79366607_79366710_79366863_79369498
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010109	chr10	+	1565	2	FSM	ENSMUSG00000020308.8	ENSMUST00000020552.8	1143	2	-417	-5	-417	5	multi-exon	FALSE	canonical	3	316	junction_1	0	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGGTCACCTGTGTGC	7548	False	NA	16	True	AATAAA	-18	NA	79504785	79511966	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_79505618_79511233
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010117	chr10	+	994	2	FSM	ENSMUSG00000020308.8	ENSMUST00000220175.2	278	2	-37	-679	-7	0	multi-exon	FALSE	canonical	3	13	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTTGCTGGTCACCTG	8472	False	NA	11	True	AATAAA	-13	NA	79505709	79511961	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_79505976_79511233
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010126	chr10	+	1098	5	FSM	ENSMUSG00000020307.16	ENSMUST00000020550.13	1266	5	181	-13	-28	13	multi-exon	FALSE	canonical	3	1645	junction_4	163.290194133022	814	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGGACGCCGGTGGCACT	NA	False	NA	34	True	AATAAA	-34	NA	79518209	79524245	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010165	chr10	+	1044	8	NNC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_7	2320.27355881911	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	False	NA	21	True	AATAAA	-15	NA	79540339	79547803	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327_79547517_79547718
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010168	chr10	+	1236	7	NNC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	-2	0	intron_retention	FALSE	canonical	1	91	junction_3	2439.70617538716	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	False	NA	21	True	AATAAA	-15	NA	79540339	79547803	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546103_79546237_79546471_79546755_79547089_79547115_79547327
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010171	chr10	+	1365	6	NIC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	6175	junction_4	469.983233743503	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	False	NA	21	True	AATAAA	-15	NA	79540339	79547803	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_+_79540419_79545504_79545662_79545891_79546237_79546471_79546755_79547089_79547115_79547327
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010192	chr10	+	739	2	NNC	ENSMUSG00000023175.16	novel	1240	6	NA	NA	564	0	intron_retention	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	False	NA	21	True	AATAAA	-15	NA	79546502	79547803	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_79546775_79547336
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010210	chr10	+	738	2	NNC	ENSMUSG00000023175.16	novel	1240	6	NA	NA	569	0	intron_retention	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	False	NA	21	True	AATAAA	-15	NA	79546507	79547803	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_79546779_79547336
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010211	chr10	+	743	2	NNC	ENSMUSG00000023175.16	novel	1240	6	NA	NA	569	0	intron_retention	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	False	NA	21	True	AATAAA	-15	NA	79546507	79547803	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_79546779_79547331
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010230	chr10	+	478	1	Genic_Genomic	ENSMUSG00000023175.16	novel	NA	NA	NA	NA	1389	2	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTCACTACTTGAAAC	NA	False	NA	23	True	AATAAA	-17	NA	79547327	79547805	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_+_79547300_79547800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010243	chr10	+	475	2	FSM	ENSMUSG00000035852.12	ENSMUST00000218531.2	416	2	113	-172	113	0	multi-exon	FALSE	canonical	2	6	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGGAGCAGAGGATGTG	637	False	NA	3	True	AATAAA	-17	NA	79665232	79666286	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_79665266_79665844
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010250	chr10	+	2935	14	FSM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	178	-3	0	3	multi-exon	FALSE	canonical	3	966	junction_8	238.590734232364	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCTGTCATTGGGCG	1561	False	NA	26	True	AATAAA	-16	NA	79690438	79700269	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010273	chr10	-	383	2	Antisense	novelGene_ENSMUSG00000111897.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGAGCCACAGCCAAGG	NA	False	NA	NA	False	NA	NA	NA	79724848	79720541	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr10_-_79720559_79724482
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010277	chr10	+	357	1	FSM	ENSMUSG00000111897.2	ENSMUST00000218521.2	251	1	-53	-53	-53	53	mono-exon	FALSE	NA	NA	NA	NA	NA	1052	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGGGGGGAAGAAAAGTGA	7865	False	NA	3	True	AATAAA	-19	NA	79724492	79724849	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_79724500_79724800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010280	chr10	-	1829	8	FSM	ENSMUSG00000035781.15	ENSMUST00000045628.15	1898	8	69	0	-9	0	multi-exon	FALSE	canonical	3	145	junction_7	14.1608831731957	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTCCCCGTGTTTGTC	9751	False	NA	-8	True	AATAAA	-15	NA	79752771	79745885	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79748482_79748604_79749058_79749181_79749390_79749546_79752656
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010291	chr10	+	1420	10	NNC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	-13	86	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	540.060513298919	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTTGGTTGTTCTGTCCC	2273	False	NA	36	True	ACTAAA	-24	NA	79795972	79803531	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_79796209_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010298	chr10	+	1397	10	NNC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	-1	81	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	540.060513298919	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGCGCCTTGGTTGTTCT	2285	False	NA	31	True	ACTAAA	-19	NA	79795984	79803526	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_79796209_79796841_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010323	chr10	-	237	1	ISM	ENSMUSG00000013858.15	ENSMUST00000132080.2	3487	5	1417	2172	1417	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCGTGTAGTTCCTCAGC	NA	False	NA	-19	True	AATAAA	-16	NA	79813190	79812953	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_-_79813000_79813200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010354	chr10	-	1234	7	FSM	ENSMUSG00000004667.19	ENSMUST00000004786.10	1148	7	-66	-20	-66	20	multi-exon	FALSE	canonical	3	2552	junction_2	153.800375667797	3114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGCTCAGGGTGCGTT	5449	False	NA	1	True	ATTAAA	-39	NA	79875695	79871762	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_79872136_79872360_79872433_79872597_79872677_79872748_79872808_79873021_79873219_79874272_79874448_79875416
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010371	chr10	-	1078	7	NNC	ENSMUSG00000004667.19	novel	1148	7	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1062.20206280266	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGCAATCCTAGAGA	5585	False	NA	-19	True	ATTAAA	-19	NA	79875559	79871782	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_79872136_79872360_79872433_79872597_79872677_79872748_79872804_79873017_79873219_79874272_79874448_79875416
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010400	chr10	+	857	7	NNC	ENSMUSG00000075706.12	novel	959	7	NA	NA	97	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2993.03227884736	79	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGTGTCTTTGGGTCA	752	False	NA	5	True	AATAAA	-15	NA	79889418	79892274	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_79889550_79890347_79890437_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010451	chr10	-	1429	6	ISM	ENSMUSG00000035673.11	ENSMUST00000218630.2	3903	32	42298	-757	16511	-22	3prime_fragment	FALSE	canonical	3	144	junction_5	16.2283702200806	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGCCTTTTGCTTACTT	NA	False	NA	-18	True	AATGAA	-35	NA	79894723	79892847	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010465	chr10	+	973	4	NNC	ENSMUSG00000003072.16	novel	931	4	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_3	1112.25186995672	397	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTTTCTAACTGCAC	4399	False	NA	20	True	ATTAAA	-19	NA	79978102	79981652	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_79978441_79979665_79979820_79981052_79981142_79981260
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010484	chr10	+	802	3	NNC	ENSMUSG00000003072.16	novel	1410	5	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	2	62	junction_2	1187	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGTTCTGTTTCTAAC	4476	False	NA	15	True	ATTAAA	-14	NA	79978179	79981647	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_79978441_79979665_79979820_79981260
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010509	chr10	+	396	1	NIC	ENSMUSG00000003072.16	novel	931	4	NA	NA	3052	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCTGTTTCTAACTGCA	7552	False	NA	19	True	ATTAAA	-18	NA	79981255	79981651	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_+_79981300_79981700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010513	chr10	+	419	1	ISM	ENSMUSG00000035621.14	ENSMUST00000042057.12	3727	9	9678	0	6712	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTGCCCCTGGCTGTTC	2205	False	NA	25	True	AATAAA	-17	NA	79993783	79994202	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_79993800_79994200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010520	chr10	+	765	7	NIC	ENSMUSG00000045193.14	novel	834	8	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_5	159.6200349441	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCGACTCTGTGGCTTGG	6189	False	NA	NA	False	AATAAA	-17	NA	80003671	80008620	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80008247_80008347_80008470
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010525	chr10	+	665	6	NIC	ENSMUSG00000045193.14	novel	834	8	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	147.218205395936	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCGACTCTGTGGCTTGG	6190	False	NA	NA	False	AATAAA	-17	NA	80003672	80008620	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80008470
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010526	chr10	+	1477	6	FSM	ENSMUSG00000045193.14	ENSMUST00000140774.2	912	6	-47	-518	-1	0	multi-exon	FALSE	canonical	3	335	junction_5	19.6936538001459	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTCTGACCATTTCCC	6190	False	NA	NA	False	ATTAAA	-18	NA	80003672	80007489	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010529	chr10	+	1264	7	NNC	ENSMUSG00000045193.14	novel	1321	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	133.995024783261	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTCTGACCATTTCCC	6190	False	NA	NA	False	ATTAAA	-18	NA	80003672	80007489	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006179_80006258_80006341_80006527_80006599_80006815
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010541	chr10	+	675	1	NIC	ENSMUSG00000045193.14	novel	1321	7	NA	NA	754	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTCTGACCATTTCCC	9332	False	NA	NA	False	ATTAAA	-18	NA	80006814	80007489	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_+_80006800_80007500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010566	chr10	+	758	8	NNC	ENSMUSG00000020153.15	novel	983	9	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	768.810531049791	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9686	False	NA	24	True	AATAAA	-15	NA	80085279	80092627	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_80085326_80088230_80088268_80088907_80088992_80089500_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010575	chr10	+	756	8	NNC	ENSMUSG00000020153.15	novel	983	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	794.476621456425	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9689	False	NA	24	True	AATAAA	-15	NA	80085282	80092627	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_80085326_80088230_80088272_80088917_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010576	chr10	+	718	8	NNC	ENSMUSG00000020153.15	novel	983	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_7	789.099667795067	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9689	False	NA	24	True	AATAAA	-15	NA	80085282	80092627	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_80085326_80088230_80088268_80088907_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092513
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010591	chr10	+	759	8	NNC	ENSMUSG00000020153.15	novel	983	9	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	794.114729797674	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9696	False	NA	24	True	AATAAA	-15	NA	80085289	80092627	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_80085326_80088230_80088268_80088907_80088992_80089493_80089618_80090673_80090854_80090923_80090975_80091757_80091847_80092469
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010592	chr10	+	1378	7	ISM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	4	-1	4	0	intron_retention	FALSE	canonical	3	1255	junction_1	370.244701365042	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9696	False	NA	24	True	AATAAA	-15	NA	80085289	80092627	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_80085326_80088230_80088268_80088907_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010611	chr10	+	161	1	NIC	ENSMUSG00000020153.15	novel	983	9	NA	NA	3318	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	NA	False	NA	24	True	AATAAA	-15	NA	80092466	80092627	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_+_80092500_80092600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010625	chr10	+	704	1	Genic_Genomic	ENSMUSG00000069565.13	novel	NA	NA	NA	NA	4843	5	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGTCTGCTTGTGTCTG	1599	False	NA	17	True	AATAAA	-26	NA	80123543	80124247	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_+_80123500_80124200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010639	chr10	+	443	4	NNC	ENSMUSG00000063457.15	novel	500	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	3526.87986123082	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	6342	False	NA	30	True	AATAAA	-21	NA	80128286	80129948	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_80128318_80128608_80128695_80129475_80129654_80129800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010640	chr10	+	1281	3	NIC	ENSMUSG00000063457.15	novel	500	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	5732	junction_1	998.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	6342	False	NA	30	True	AATAAA	-21	NA	80128286	80129948	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_+_80128318_80128608_80129711_80129800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010642	chr10	+	488	4	NNC	ENSMUSG00000063457.15	novel	500	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	11	junction_3	3525.98585110919	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	6342	False	NA	30	True	AATAAA	-21	NA	80128286	80129948	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_80128318_80128608_80128695_80129475_80129699_80129800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010650	chr10	+	504	4	NNC	ENSMUSG00000063457.15	novel	500	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3831.44275117815	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	6342	False	NA	30	True	AATAAA	-21	NA	80128286	80129948	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_80128322_80128608_80128695_80129475_80129711_80129800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010655	chr10	+	791	3	FSM	ENSMUSG00000063457.15	ENSMUST00000062674.7	572	3	-192	-27	0	0	multi-exon	FALSE	canonical	3	7729	junction_2	373	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	6342	False	NA	30	True	AATAAA	-21	NA	80128286	80129948	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_80128695_80129475_80129711_80129800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010661	chr10	+	1662	1	NIC	ENSMUSG00000063457.15	novel	500	4	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	6342	False	NA	30	True	AATAAA	-21	NA	80128286	80129948	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_+_80128300_80129900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010713	chr10	-	1282	5	ISM	ENSMUSG00000035478.15	ENSMUST00000105347.2	914	6	309	-443	-84	0	3prime_fragment	FALSE	canonical	3	1097	junction_1	94.3328548279972	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	False	NA	-4	True	AATAAA	-22	NA	80231244	80228372	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010721	chr10	-	740	1	ISM	ENSMUSG00000035478.15	ENSMUST00000142997.8	1118	4	1892	0	1892	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	False	NA	-4	True	AATAAA	-22	NA	80229112	80228372	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_-_80228400_80229100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010725	chr10	-	1469	6	NIC	ENSMUSG00000035478.15	novel	1566	7	NA	NA	45	0	intron_retention	FALSE	canonical	3	918	junction_5	149.282818837266	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	False	NA	-4	True	AATAAA	-22	NA	80235211	80228372	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010739	chr10	+	417	3	Antisense	novelGene_ENSMUSG00000020163.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	7.5	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGCAGACGTATAGCG	NA	False	NA	NA	False	NA	NA	NA	80238830	80242634	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr10_+_80238986_80239963_80240124_80242532
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010742	chr10	-	611	3	FSM	ENSMUSG00000020163.13	ENSMUST00000141683.2	605	3	-5	-1	-5	0	multi-exon	FALSE	canonical	2	31	junction_2	2065	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTCCTTCCTCATC	NA	False	NA	-1	True	ATTAAA	-21	NA	80242634	80238830	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_80238990_80239969_80240121_80242333
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010743	chr10	-	410	3	NNC	ENSMUSG00000020163.13	novel	445	3	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	1	38	junction_2	2061.5	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTCCTTCCTCATC	NA	False	NA	-1	True	ATTAAA	-21	NA	80242640	80238830	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_80238990_80239969_80240110_80242529
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010756	chr10	-	160	1	NIC	ENSMUSG00000020163.13	novel	520	3	NA	NA	3610	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTCCTTCCTCATC	NA	False	NA	-1	True	ATTAAA	-21	NA	80238990	80238830	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_80238800_80239000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010776	chr10	-	1302	4	ISM	ENSMUSG00000003346.15	ENSMUST00000003436.12	1468	5	3310	0	-407	0	3prime_fragment	TRUE	canonical	3	372	junction_3	33.2565782966318	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTGCTTGGCTCCTTTGT	NA	False	NA	-5	True	ATTAAA	-15	NA	80422865	80419487	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_-_80419898_80419976_80420157_80421441_80421637_80422348
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010810	chr10	+	755	2	FSM	ENSMUSG00000003345.17	ENSMUST00000220431.2	473	2	206	-488	206	-3	multi-exon	FALSE	canonical	3	678	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGCCTGGGCTTTA	NA	False	NA	14	True	GGGGCT	-41	NA	80475678	80476580	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_80475709_80475855
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010817	chr10	-	701	1	ISM	ENSMUSG00000003344.15	ENSMUST00000126980.8	2449	9	13171	6	1309	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGAGTGCTATGTTGTC	NA	False	NA	-5	True	AATAAA	-20	NA	80479157	80478456	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_-_80478500_80479200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010823	chr10	-	569	1	ISM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	34740	0	1534	0	mono-exon	FALSE	NA	NA	NA	NA	NA	272	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTTGTGTCCCCAT	5361	False	NA	-2	True	ATTAAA	-14	NA	80543358	80542789	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_-_80542800_80543400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010833	chr10	-	1256	5	NIC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	19	4	intron_retention	FALSE	canonical	3	953	junction_4	141.850934082226	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCGGAATGAGTGGAGAAG	NA	False	NA	1	True	AATAAA	-21	NA	80634375	80631928	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_80632357_80632424_80632657_80633606_80633674_80633743_80633812_80633914
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010875	chr10	-	1019	4	NIC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	-46	0	intron_retention	FALSE	canonical	3	953	junction_3	130.110209694192	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634074	80631932	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_80632657_80633606_80633674_80633743_80633812_80633914
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010913	chr10	+	1024	5	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	460	junction_4	2987.93005272881	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGTGTCCTGCTGC	NA	False	NA	19	True	AATAAA	-19	NA	80662518	80665124	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544_80664631_80664726
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010919	chr10	+	1038	5	NNC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	3129.74535705383	55	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGTGTCCTGCTGC	NA	False	NA	19	True	AATAAA	-19	NA	80662519	80665124	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_80662740_80664070_80664210_80664294_80664468_80664544_80664631_80664704
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010927	chr10	+	1121	4	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	0	-2	intron_retention	FALSE	canonical	3	6566	junction_3	484.21023900322	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCTTGTGTCCTGCT	NA	False	NA	17	True	AATAAA	-17	NA	80662519	80665122	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_+_80662740_80664070_80664468_80664544_80664631_80664704
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010963	chr10	-	943	3	FSM	ENSMUSG00000035215.10	ENSMUST00000217781.2	646	3	-187	-110	-1	-2	multi-exon	FALSE	canonical	3	4365	junction_1	93.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTCTGTAACTTTGA	NA	False	NA	-11	True	AATAAA	-27	NA	80691044	80688656	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_80688935_80689591_80689664_80690451
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000010966	chr10	-	471	4	NNC	ENSMUSG00000035215.10	novel	468	4	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1811.40393679108	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTCTGTAACTTTGA	NA	False	NA	-11	True	AATAAA	-27	NA	80691044	80688656	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_80688935_80689591_80689660_80690447_80690543_80691014
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011034	chr10	-	3368	12	FSM	ENSMUSG00000062075.14	ENSMUST00000179022.8	3370	12	3	-1	3	1	multi-exon	FALSE	canonical	3	226	junction_8	24.5238962565761	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCAGAGTAGATCTTCAG	3114	False	NA	0	True	AATAAA	-18	NA	80754076	80737196	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740608_80740719_80740846_80740914_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011044	chr10	+	1282	4	NNC	ENSMUSG00000015312.10	novel	1284	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	44.8627536678999	34	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTCTCGTTGTATTTTA	248	False	NA	5	True	AATAAA	-14	NA	80765906	80768038	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_80766194_80766281_80766382_80766862_80767086_80767366
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011085	chr10	+	239	1	ISM	ENSMUSG00000035027.19	ENSMUST00000143517.8	2405	11	17730	814	1485	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGGCTGTGCTCCTGCC	NA	False	NA	13	True	NA	NA	NA	80959478	80959717	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_80959500_80959700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011089	chr10	+	292	1	ISM	ENSMUSG00000035011.16	ENSMUST00000048128.15	5938	3	13030	2630	11348	1134	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCGGTAGAATCCACTTG	NA	False	NA	8	True	AATAAA	-17	NA	80985134	80985426	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_80985100_80985400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011101	chr10	+	1073	5	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	3048.74912874116	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCGCAACTCTGTTTT	2196	False	NA	32	True	AATAAA	-20	NA	81012479	81018332	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_81012564_81013498_81013714_81013886_81013993_81017401_81017460_81017722
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011102	chr10	+	583	4	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2970.23930947585	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCGCAACTCTGTTTT	2196	False	NA	32	True	AATAAA	-20	NA	81012479	81018332	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_81012564_81013498_81013714_81013886_81013993_81018154
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011103	chr10	+	3067	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1963.88304524089	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCGCAACTCTGTTTT	2196	False	NA	32	True	AATAAA	-20	NA	81012479	81018332	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_81012564_81013498_81013714_81013886_81014062_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011107	chr10	+	3068	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1962.07709949907	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCGCAACTCTGTTTT	2196	False	NA	32	True	AATAAA	-20	NA	81012479	81018332	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016240_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011124	chr10	+	907	4	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	68	0	at_least_one_novel_splicesite	FALSE	canonical	3	152	junction_3	3617.00652781029	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCGCAACTCTGTTTT	6669	False	NA	32	True	AATAAA	-20	NA	81016952	81018332	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_81016992_81017061_81017245_81017326_81017402_81017722
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011125	chr10	+	980	4	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	68	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3688.25405849434	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTTGTACAGCGCAC	6669	False	NA	43	True	AATAAA	-31	NA	81016952	81018343	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_81016992_81017061_81017245_81017326_81017464_81017722
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011189	chr10	+	1055	1	Genic_Genomic	ENSMUSG00000034902.18	novel	NA	NA	NA	NA	2078	1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTCTCCGGTGACTTAT	3286	False	NA	NA	False	AATAAA	-17	NA	81154753	81155808	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_+_81154800_81155800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011195	chr10	-	1473	10	FSM	ENSMUSG00000020232.18	ENSMUST00000105323.8	1463	10	-3	-7	-3	7	multi-exon	FALSE	canonical	3	169	junction_9	133.860992944542	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGGCTTTGGGGGAG	NA	False	NA	-1	True	AATAAA	-27	NA	81186317	81181874	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967_81186024_81186240
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011201	chr10	-	1629	9	FSM	ENSMUSG00000020232.18	ENSMUST00000020454.11	1621	9	-3	-5	-1	2	multi-exon	FALSE	canonical	3	490	junction_7	50.249222630803	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAATATTTGTGGCTTTGG	NA	False	NA	-6	True	AATAAA	-22	NA	81186261	81181879	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011235	chr10	+	440	1	ISM	ENSMUSG00000078440.11	ENSMUST00000072751.13	1444	5	3485	0	2292	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGGCTCCTGCTGTGTG	NA	False	NA	15	True	AATAAA	-19	NA	81223746	81224186	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_81223700_81224200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011276	chr10	-	1675	8	FSM	ENSMUSG00000034748.17	ENSMUST00000042923.9	1891	8	216	0	-15	0	multi-exon	FALSE	canonical	3	197	junction_1	20.6723713873254	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGTTACATTTATGTA	9874	False	NA	-11	True	AATAAA	-25	NA	81463415	81457620	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81463305
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011286	chr10	+	969	5	FSM	ENSMUSG00000054708.18	ENSMUST00000132458.2	829	5	0	-140	0	4	multi-exon	FALSE	canonical	3	22	junction_1	34.9070193514141	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGCAAGAGTTGTGTCTCT	NA	False	NA	NA	False	AATAAA	-33	NA	81479636	81483448	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_81479728_81480809_81480978_81482138_81482268_81482626_81482693_81482933
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011290	chr10	+	165	1	Genic_Genomic	ENSMUSG00000054708.18	novel	NA	NA	NA	NA	818	4	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGCAAGAGTTGTGTCTCT	NA	False	NA	NA	False	AATAAA	-33	NA	81483283	81483448	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_+_81483300_81483400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011367	chr10	+	2354	4	Genic_Genomic	ENSMUSG00000112790.2	novel	2758	1	NA	NA	-17487	-2656	multi-exon	FALSE	canonical	3	45	junction_1	10.7806410858642	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATACTGCCATCCATT	NA	False	NA	NA	False	AATAAA	-23	NA	81832819	81850408	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_+_81832952_81847436_81847564_81847762_81847824_81848374
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011382	chr10	+	785	5	NNC	ENSMUSG00000112160.2	novel	2726	4	NA	NA	-62	11713	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	9.08295106229247	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTGCCTTCTTTCT	NA	False	NA	13	True	NA	NA	NA	81919124	81958763	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_81919247_81943643_81943771_81943972_81944034_81944572_81944605_81958320
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011391	chr10	+	504	4	FSM	ENSMUSG00000078435.6	ENSMUST00000201286.4	2634	4	-11	2141	-11	-1087	multi-exon	FALSE	canonical	1	5	junction_2	1.24721912892465	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTGGTAAATCCTTTC	NA	False	NA	NA	False	NA	NA	NA	81963835	81986758	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_81963933_81974086_81974214_81986050_81986112_81986539
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011399	chr10	-	2158	4	FSM	ENSMUSG00000062931.16	ENSMUST00000156218.2	2124	4	-30	-4	-30	0	multi-exon	FALSE	canonical	2	18	junction_1	59.275252471462	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTTATGTTGTCATTA	NA	False	NA	NA	False	NA	NA	NA	82077144	82060683	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_82062428_82063278_82063426_82063632_82063760_82077004
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011411	chr10	+	182	1	Intergenic	novelGene_35	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTTTAAAAAGTCACAA	6888	False	NA	NA	False	NA	NA	NA	82185223	82185405	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr10_+_82185200_82185400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011421	chr10	-	758	3	FSM	ENSMUSG00000063320.12	ENSMUST00000079648.12	716	3	-42	0	-10	0	multi-exon	FALSE	canonical	3	302	junction_2	73.5	1674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTACTATACATTCTTGG	NA	False	NA	0	True	NA	NA	NA	82459072	82455684	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_82456052_82458541_82458659_82458798
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011433	chr10	-	366	1	NIC	ENSMUSG00000063320.12	novel	586	2	NA	NA	2708	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCTTACTATACATTCTT	NA	False	NA	-2	True	NA	NA	NA	82456052	82455686	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_82455700_82456100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011495	chr10	-	383	1	ISM	ENSMUSG00000020256.15	ENSMUST00000020497.14	6027	23	46308	0	8185	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTTTCTCCTTTTTCTC	3040	False	NA	NA	False	NA	NA	NA	83323696	83323313	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_-_83323300_83323700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011502	chr10	+	2198	1	ISM	ENSMUSG00000034560.7	ENSMUST00000038388.7	5858	33	50335	0	8483	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAAACTGTCCTTCCAT	NA	False	NA	14	True	AATAAA	-17	NA	83430139	83432337	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_83430100_83432300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011509	chr10	+	1172	6	FSM	ENSMUSG00000087651.4	ENSMUST00000150459.3	1194	6	22	0	22	0	multi-exon	FALSE	canonical	3	89	junction_4	8.16333265278342	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGATTTCTTAATTATTT	NA	False	NA	6	True	ATTAAA	-19	NA	83558750	83598626	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_83558899_83573772_83573798_83593308_83593345_83593997_83594078_83595456_83595495_83597781
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011513	chr10	+	1159	5	NNC	ENSMUSG00000087651.4	novel	1194	6	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.1418169086865	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGATTTCTTAATTATTT	NA	False	NA	6	True	ATTAAA	-19	NA	83558757	83598626	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_83558918_83593308_83593345_83593997_83594078_83595456_83595495_83597781
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011534	chr10	-	768	1	ISM	ENSMUSG00000046841.6	ENSMUST00000053871.5	3089	2	6990	0	6964	0	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGGGTTCTGAGAACT	NA	False	NA	-15	True	AATAAA	-26	NA	84362936	84362168	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_-_84362200_84362900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011566	chr10	+	223	1	Intergenic	novelGene_36	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAGAGAATATTGCAATCA	NA	False	NA	NA	False	AAGAAA	-31	NA	84993601	84993824	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr10_+_84993600_84993800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011577	chr10	+	2581	15	FSM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	-2	-7	-2	7	multi-exon	FALSE	canonical	3	284	junction_1	18.5957258639765	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCACTTTGACTTCACTCT	NA	False	NA	15	True	AATAAA	-26	NA	85707692	85724967	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_85707879_85710141_85710201_85710312_85710498_85712161_85712248_85712349_85712447_85714342_85714454_85715125_85715257_85715693_85715756_85717866_85717964_85718734_85718797_85720326_85720439_85721473_85721565_85721660_85721783_85723086_85723193_85723893
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011603	chr10	+	1935	9	FSM	ENSMUSG00000001786.15	ENSMUST00000130320.8	5388	9	-84	3537	-84	13	multi-exon	TRUE	canonical	3	208	junction_3	24.7878498462452	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTTAAGGATGTATTT	NA	False	NA	23	True	AGTAAA	-26	NA	85857751	85884200	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011635	chr10	-	2784	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	46	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	841.395553535108	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGCTTATTTTCATAAC	NA	False	NA	-39	True	AATAAA	-17	NA	86541327	86526702	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_86526993_86527492_86527613_86527999_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011638	chr10	-	2783	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	46	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	880.689577256305	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGCTTATTTTCATAA	NA	False	NA	-40	True	AATAAA	-16	NA	86541327	86526703	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540153_86540261_86541170
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011648	chr10	+	415	2	Antisense	novelGene_ENSMUSG00000020048.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGACATCCACAACCT	NA	False	NA	NA	False	NA	NA	NA	86526703	86527614	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr10_+_86526995_86527490
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011651	chr10	-	561	1	NIC	ENSMUSG00000020048.14	novel	3222	13	NA	NA	4321	0	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGCTTATTTTCATAA	NA	False	NA	-40	True	AATAAA	-16	NA	86527264	86526703	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_86526700_86527300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011696	chr10	+	871	7	NNC	ENSMUSG00000020056.17	novel	1052	7	NA	NA	-17	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	135.967418482844	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTTTGTTGACCAAATA	NA	False	NA	16	True	AATAAA	-19	NA	88036990	88081871	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_88037159_88037673_88037773_88049508_88049575_88051828_88051937_88055111_88055223_88070255_88070321_88081617
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011741	chr10	+	1039	8	NNC	ENSMUSG00000020059.10	novel	1139	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.8642851191468	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTTCAGTATATC	NA	False	NA	4	True	AATAAA	-16	NA	88295524	88309098	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_88295575_88298322_88298466_88299224_88299317_88302300_88302419_88303144_88303245_88305407_88305507_88308537_88308643_88308766
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011748	chr10	+	1041	9	NNC	ENSMUSG00000020059.10	novel	1169	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	40.8532051986132	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTTCAGTATATC	NA	False	NA	4	True	AATAAA	-16	NA	88295525	88309098	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88302300_88302419_88303148_88303245_88305407_88305507_88308537_88308643_88308766
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011749	chr10	+	1042	9	NNC	ENSMUSG00000020059.10	novel	1169	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	39.0832444917256	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTTCAGTATATC	NA	False	NA	4	True	AATAAA	-16	NA	88295525	88309098	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88302300_88302419_88303144_88303245_88305407_88305507_88308537_88308643_88308769
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011838	chr10	-	1593	10	NIC	ENSMUSG00000019948.5	novel	1705	11	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	25	junction_9	88.0716599363871	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGTTTAATGTTTAT	NA	False	NA	-17	True	AATAAA	-22	NA	89568162	89547831	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564015_89564085_89568035
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011856	chr10	+	744	1	Genic_Genomic	ENSMUSG00000019975.13	novel	NA	NA	NA	NA	1440	6	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTCCATAATATTTTT	986	False	NA	18	True	AATAAA	-23	NA	90937731	90938475	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_+_90937700_90938500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011873	chr10	-	341	1	NIC	ENSMUSG00000061904.13	novel	1612	8	NA	NA	2710	4	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGTTTGTTATTTTAAA	NA	False	NA	0	True	AATAAA	-20	NA	90952989	90952648	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_90952600_90953000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011897	chr10	-	1350	8	NNC	ENSMUSG00000061904.13	novel	1612	8	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1799.70016777172	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGAGTTTGTTATTT	NA	False	NA	-4	True	AATAAA	-16	NA	90959868	90952652	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_90952987_90953070_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957906_90959419_90959569_90959773
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011907	chr10	-	1308	8	NNC	ENSMUSG00000061904.13	novel	1612	8	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1856.18477484526	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGAGTTTGTTATTT	NA	False	NA	-4	True	AATAAA	-16	NA	90959829	90952652	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957779_90957906_90959419_90959566_90959773
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011951	chr10	+	667	2	FSM	ENSMUSG00000111531.2	ENSMUST00000213849.2	585	2	-80	-2	-80	2	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTGTTAGTTAATTTTCA	7837	False	NA	NA	False	NA	NA	NA	93153184	93158589	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_93153596_93158333
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011955	chr10	+	2052	19	FSM	ENSMUSG00000015889.9	ENSMUST00000016033.9	2029	19	-22	-1	-22	0	multi-exon	FALSE	canonical	3	348	junction_6	42.1416262935671	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGTGTCATTTTTGG	NA	False	NA	22	True	AATACA	-21	NA	93289250	93320737	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011960	chr10	+	1988	18	NNC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	112.25036894692	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGTGTCATTTTTGG	NA	False	NA	22	True	AATACA	-21	NA	93289307	93320737	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305068_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011963	chr10	+	120	1	ISM	ENSMUSG00000015889.9	ENSMUST00000216931.2	540	5	9838	0	2285	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGTGTCATTTTTGG	NA	False	NA	22	True	AATACA	-21	NA	93320617	93320737	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_93320600_93320700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000011973	chr10	-	145	1	NIC	ENSMUSG00000020018.7	novel	861	4	NA	NA	6174	-359	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGACTATTTAATGCA	NA	False	NA	0	True	AATAAA	-29	NA	93419394	93419249	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_93419200_93419400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012003	chr10	-	687	1	NIC	ENSMUSG00000036112.16	novel	4424	11	NA	NA	2397	10	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATGTGTATGGTTGTA	NA	False	NA	-6	True	AATAAA	-26	NA	93697466	93696779	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_93696800_93697500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012017	chr10	+	415	1	Genic_Genomic	ENSMUSG00000005897.15	novel	NA	NA	NA	NA	40516	5	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTATCCTGTCAATGT	NA	False	NA	NA	False	ATTAAA	-20	NA	94032663	94033078	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_+_94032700_94033100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012035	chr10	+	545	4	NNC	ENSMUSG00000020022.18	novel	1110	4	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1726.6530887497	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCTTGTGCGTTCAC	NA	False	NA	14	True	ATTAAA	-14	NA	94034896	94056811	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_94034993_94035811_94035904_94039149_94039238_94056542
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012036	chr10	+	522	4	NNC	ENSMUSG00000020022.18	novel	1110	4	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1861.34294410126	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCTTGTGCGTTCAC	NA	False	NA	14	True	ATTAAA	-14	NA	94034896	94056811	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_94034993_94035811_94035895_94039149_94039224_94056542
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012069	chr10	-	1036	3	FSM	ENSMUSG00000045867.11	ENSMUST00000053594.7	1661	3	103	522	-4	-3	multi-exon	FALSE	canonical	3	29	junction_2	28.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTGCCTCTTTCAATGA	NA	False	NA	-1	True	AATAAA	-19	NA	95159867	95011129	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_95011841_95158447_95158752_95159846
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012077	chr10	+	522	3	NNC	ENSMUSG00000100550.3	novel	642	3	NA	NA	3075	2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	6	41	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTGGGAAGTCAAGATG	NA	False	NA	NA	False	NA	NA	NA	95193824	95199080	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_95193983_95194128_95194221_95198808
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012090	chr10	-	1197	3	FSM	ENSMUSG00000112261.2	ENSMUST00000219379.2	660	3	24	-561	24	561	multi-exon	FALSE	canonical	3	19	junction_2	4.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTCAGAAACCCTAAG	1577	False	NA	NA	False	AAGAAA	-10	NA	95297062	95280616	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_95281620_95296475_95296588_95296980
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012091	chr10	-	1095	2	NIC	ENSMUSG00000112261.2	novel	660	3	NA	NA	14	561	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTCAGAAACCCTAAG	1567	False	NA	NA	False	AAGAAA	-10	NA	95297072	95280616	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_95281620_95296980
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012115	chr10	-	668	6	NNC	ENSMUSG00000062981.6	novel	661	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1625.06708784591	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTGTGTATTTCATTAT	NA	False	NA	-7	True	AATAAA	-18	NA	95337801	95316665	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_95316840_95326107_95326275_95329492_95329578_95332685_95332750_95336244_95336385_95337763
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012120	chr10	-	496	5	FSM	ENSMUSG00000062981.6	ENSMUST00000217777.2	455	5	-12	-29	0	0	multi-exon	FALSE	canonical	3	14	junction_1	1680.921826707	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGTGTATTTCATTA	NA	False	NA	-8	True	AATAAA	-17	NA	95337801	95316666	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_95316840_95329492_95329578_95332685_95332750_95336244_95336385_95337767
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012123	chr10	-	743	7	NNC	ENSMUSG00000062981.6	novel	661	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_2	1766.8786665253	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGTGTATTTCATTA	NA	False	NA	-8	True	AATAAA	-17	NA	95337801	95316666	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_95316840_95326107_95326275_95326648_95326729_95329492_95329578_95332685_95332750_95336244_95336385_95337767
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012129	chr10	-	667	6	NNC	ENSMUSG00000062981.6	novel	661	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1564.45921647066	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGTGTATTTCATTA	NA	False	NA	-8	True	AATAAA	-17	NA	95337801	95316666	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_95316840_95326107_95326275_95329488_95329578_95332685_95332750_95336244_95336385_95337767
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012130	chr10	-	808	7	NNC	ENSMUSG00000062981.6	novel	661	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	1841.9202314131	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGTGTATTTCATTA	NA	False	NA	-8	True	AATAAA	-17	NA	95337801	95316666	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_95316840_95322055_95322201_95326107_95326275_95329492_95329578_95332685_95332750_95336244_95336385_95337767
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012134	chr10	-	411	4	NIC	ENSMUSG00000062981.6	novel	455	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	1633.06848192801	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGTGTATTTCATTA	NA	False	NA	-8	True	AATAAA	-17	NA	95337801	95316666	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_95316840_95332685_95332750_95336244_95336385_95337767
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012137	chr10	-	173	1	ISM	ENSMUSG00000062981.6	ENSMUST00000219019.2	677	6	19546	0	19546	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGTGTATTTCATTA	7312	False	NA	-8	True	AATAAA	-17	NA	95316839	95316666	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_-_95316700_95316800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012144	chr10	-	706	7	NNC	ENSMUSG00000062981.6	novel	677	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_3	1736.80232995391	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGTGTATTTCATTA	NA	False	NA	-8	True	AATAAA	-17	NA	95337801	95316666	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_95316840_95326107_95326275_95326396_95326444_95329492_95329574_95332685_95332750_95336244_95336385_95337767
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012179	chr10	+	1077	3	NIC	ENSMUSG00000074781.6	novel	3867	4	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	1127	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCCTTTGTACAGTTTA	NA	False	NA	NA	False	AGTAAA	-19	NA	95351005	95378869	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_+_95351100_95377066_95377314_95378133
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012189	chr10	+	666	1	ISM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	27483	2364	1115	287	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGTGTCCTTGCCATG	NA	False	NA	13	True	AATAAA	-24	NA	95378489	95379155	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_95378500_95379200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012195	chr10	-	797	5	FSM	ENSMUSG00000020029.7	ENSMUST00000020217.7	3210	5	328	2085	328	-2085	multi-exon	FALSE	canonical	3	479	junction_2	92.7937902017156	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTGGAATTTTTTTTA	NA	False	NA	1	True	AATAAA	-36	NA	95399680	95384953	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_95385353_95385637_95385723_95387310_95387356_95388347_95388459_95399523
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012197	chr10	-	582	4	NNC	ENSMUSG00000020029.7	novel	3210	5	NA	NA	11596	-2100	at_least_one_novel_splicesite	FALSE	canonical	3	194	junction_2	240.900163737779	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAGATGCCAAAGCCAT	NA	False	NA	-14	True	AATAAA	-21	NA	95388412	95384968	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_95385353_95385637_95385726_95387310_95387356_95388347
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012232	chr10	+	1443	8	NIC	ENSMUSG00000019943.11	novel	1249	4	NA	NA	245	188	combination_of_known_junctions	FALSE	canonical	3	223	junction_6	12.7022414862697	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGTGTTACAGGGGAAACT	NA	False	NA	NA	False	AAAAAG	-7	NA	98750512	98830617	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012246	chr10	+	1343	1	ISM	ENSMUSG00000019952.16	ENSMUST00000159990.2	3449	11	89629	0	3840	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATGTCTTCTCTTTTTTT	7177	False	NA	NA	False	AATAAA	-24	NA	99032593	99033936	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_99032600_99033900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012261	chr10	+	1281	2	Genic_Genomic	ENSMUSG00000091101.3	novel	927	1	NA	NA	-997	276	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAGAGTCATAAAGTCTA	NA	False	NA	NA	False	AATAAA	-24	NA	100175700	100177900	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_+_100175773_100176691
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012266	chr10	+	1276	2	Genic_Genomic	ENSMUSG00000091552.3	novel	883	1	NA	NA	-6099	297	multi-exon	FALSE	canonical	2	11	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAGAGTCATAAAGTCTA	NA	False	NA	NA	False	AATAAA	-24	NA	100185997	100193276	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_+_100186070_100192072
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012272	chr10	+	1276	2	Genic_Genomic	ENSMUSG00000091552.3	novel	883	1	NA	NA	-978	297	multi-exon	FALSE	canonical	1	2	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAGAGTCATAAAGTCTA	NA	False	NA	NA	False	AATAAA	-24	NA	100191118	100193276	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_+_100191191_100192072
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012304	chr10	+	1223	2	FSM	ENSMUSG00000091779.9	ENSMUST00000181634.8	1246	2	-3	26	-3	-26	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTATTCTGGAGTCATAA	NA	False	NA	NA	False	AATAAA	-19	NA	103978844	103981291	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_103978954_103980177
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012310	chr10	+	1223	2	FSM	ENSMUSG00000097427.6	ENSMUST00000181287.5	1246	2	-3	26	-3	-26	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTATTCTGGAGTCATAA	NA	False	NA	NA	False	AATAAA	-19	NA	103987354	103989800	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_103987464_103988686
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012328	chr10	+	1226	2	FSM	ENSMUSG00000095022.9	ENSMUST00000181703.8	1246	2	-3	23	-3	-23	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTCTGGAGTCATAAAGT	NA	False	NA	NA	False	AATAAA	-22	NA	104021390	104023838	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_104021500_104022721
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012410	chr10	+	874	6	NNC	ENSMUSG00000020186.8	novel	1384	6	NA	NA	-14	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	80.9627074646099	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTACCACCTCTTAAT	NA	False	NA	12	True	AATAAA	-13	NA	110756036	110775356	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_110756116_110767815_110767933_110771008_110771178_110773597_110773728_110774497_110774592_110775071
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012412	chr10	+	739	5	FSM	ENSMUSG00000020186.8	ENSMUST00000219502.2	544	5	-28	-167	-13	-19	multi-exon	FALSE	canonical	1	1	junction_3	83.7585816498823	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTACCACCTCTTAAT	NA	False	NA	12	True	AATAAA	-13	NA	110756037	110775356	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_110756116_110767815_110767929_110771008_110771178_110774497_110774592_110775071
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012414	chr10	+	944	7	NNC	ENSMUSG00000020186.8	novel	1384	6	NA	NA	-13	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	93.9883266983488	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTACCACCTCTTAAT	NA	False	NA	12	True	AATAAA	-13	NA	110756037	110775356	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_110756116_110767815_110767929_110770479_110770555_110771008_110771178_110773597_110773728_110774497_110774592_110775071
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012431	chr10	-	858	1	Genic_Genomic	ENSMUSG00000035798.15	novel	NA	NA	NA	NA	5061	1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGTCTGCTCAGTTCA	NA	False	NA	0	True	AATAAA	-15	NA	110778497	110777639	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_-_110777600_110778500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012459	chr10	+	1445	15	NNC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	635.455597446848	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	23	True	AATAAA	-25	NA	111309118	111332745	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329318_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012462	chr10	+	1388	13	NNC	ENSMUSG00000058799.17	novel	1365	13	NA	NA	16	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	656.303299422861	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACATTTTTTTTTTTTAT	NA	False	NA	0	True	AATAAA	-17	NA	111309118	111330866	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326323_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012466	chr10	+	1290	13	NNC	ENSMUSG00000058799.17	novel	1512	14	NA	NA	16	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	781.097745163818	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTTGGGAAATTTTTC	NA	False	NA	19	True	AATAAA	-20	NA	111309118	111331007	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329315_111330031_111330155_111330655_111330686_111330911
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012469	chr10	+	1299	14	FSM	ENSMUSG00000058799.17	ENSMUST00000219961.2	1512	14	31	182	16	3	multi-exon	FALSE	canonical	3	75	junction_13	616.19895158057	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTTGGGAAATTTTTC	NA	False	NA	19	True	AATAAA	-20	NA	111309118	111331007	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111330911
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012519	chr10	+	522	1	FSM	ENSMUSG00000111964.2	ENSMUST00000217892.2	400	1	-32	-90	-32	90	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAGAATTATGGTTCCCA	NA	False	NA	NA	False	AATAAA	-34	NA	115105850	115106372	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_115105800_115106400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012531	chr10	-	776	1	Genic_Genomic	ENSMUSG00000069520.7	novel	NA	NA	NA	NA	7550	3	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTTGTTTTTATTT	7603	False	NA	-1	True	TATAAA	-22	NA	115177419	115176643	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_-_115176600_115177400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012561	chr10	+	1425	7	FSM	ENSMUSG00000034163.11	ENSMUST00000127283.2	1546	7	122	-1	122	0	multi-exon	FALSE	canonical	3	94	junction_4	19.1369334592098	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATAGTGGGACTGTTTT	NA	False	NA	9	True	AATAAA	-21	NA	115263331	115268677	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_115263408_115263529_115263696_115264765_115264867_115266557_115266660_115267307_115267348_115267607_115267671_115267800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012569	chr10	-	2802	16	FSM	ENSMUSG00000020166.16	ENSMUST00000105267.8	2800	16	-1	-1	0	0	multi-exon	FALSE	canonical	3	333	junction_15	67.9643697503005	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417406	116321069	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012581	chr10	-	680	1	Genic_Genomic	ENSMUSG00000064181.7	novel	NA	NA	NA	NA	13474	4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTGGGTTATTTTCTGT	NA	False	NA	-1	True	ATTAAA	-20	NA	116742364	116741684	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_-_116741700_116742400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012611	chr10	-	284	1	Genic_Genomic	ENSMUSG00000034024.9	novel	NA	NA	NA	NA	3621	4	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTACTGATCTGTATAT	9747	False	NA	-7	True	AATAAA	-23	NA	116887185	116886901	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_-_116886900_116887200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012630	chr10	-	503	1	Genic_Genomic	ENSMUSG00000020171.9	novel	NA	NA	NA	NA	1715	80	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGTGCTTTGATCATA	NA	False	NA	-1	True	AATAAA	-22	NA	117051548	117051045	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_-_117051000_117051500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012634	chr10	-	1411	7	FSM	ENSMUSG00000020171.9	ENSMUST00000020382.8	1327	7	-3	-81	-3	80	multi-exon	FALSE	canonical	3	274	junction_4	39.2074256005444	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGTGCTTTGATCATA	3368	False	NA	-1	True	AATAAA	-22	NA	117060415	117051045	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_117051742_117053116_117053205_117053333_117053427_117056237_117056333_117056436_117056504_117058078_117058199_117060163
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012635	chr10	-	1389	7	NNC	ENSMUSG00000020171.9	novel	1327	7	NA	NA	-4	80	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	127.619225301937	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGTGCTTTGATCATA	3384	False	NA	-1	True	AATAAA	-22	NA	117060399	117051045	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_117051742_117053116_117053205_117053333_117053427_117056237_117056333_117056436_117056504_117058078_117058199_117060169
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012646	chr10	+	526	4	Intergenic	novelGene_37	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	4.18993502999218	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGAAGAGCAATAGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	117060432	117063906	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr10_+_117060473_117062495_117062653_117063449_117063496_117063623
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012664	chr10	-	171	1	Genic_Genomic	ENSMUSG00000055531.13	novel	NA	NA	NA	NA	2087	6	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTCAGTCTCTGTAT	395	False	NA	NA	False	AATAAA	-28	NA	117189874	117189703	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_-_117189700_117189900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012685	chr10	-	617	1	ISM	ENSMUSG00000052681.9	ENSMUST00000064667.9	2724	8	30956	592	3461	-592	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGTTATTTTACACAGT	NA	False	NA	-13	True	AATAAA	-26	NA	117650984	117650367	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_-_117650400_117651000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012697	chr10	-	1087	5	ISM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	29999	3390	-1847	-3390	3prime_fragment	FALSE	canonical	3	758	junction_4	26.7441582406327	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATGGATTTCTTGGTT	NA	False	NA	-29	True	ATTAAA	-15	NA	119045961	119038549	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012708	chr10	-	576	2	ISM	ENSMUSG00000020228.12	ENSMUST00000154501.2	3095	12	-60	26124	-60	-26124	5prime_fragment	FALSE	canonical	3	65	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAAAAGCTGTCTACACC	NA	False	NA	NA	False	AAGAAA	-1	NA	119948830	119946798	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_-_119947134_119948589
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012712	chr10	+	846	2	Antisense	novelGene_ENSMUSG00000020227.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCAAACTTAAGAGATAGG	3646	False	NA	NA	False	NA	NA	NA	119996613	120000670	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr10_+_119996686_119999896
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012760	chr10	+	870	1	NIC	ENSMUSG00000020224.16	novel	1664	3	NA	NA	4016	0	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGGAGTTTGACATTT	NA	False	NA	8	True	AATAAA	-17	NA	120067106	120067976	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_+_120067100_120068000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012782	chr10	+	198	1	Intergenic	novelGene_38	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGGACATTAATCTAGC	NA	False	NA	NA	False	AAGAAA	-1	NA	120658242	120658440	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr10_+_120658200_120658400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012793	chr10	+	2174	1	Genic_Genomic	ENSMUSG00000034707.8	novel	NA	NA	NA	NA	11965	4	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCTTTGTTTTTAGTC	NA	False	NA	12	True	ATTAAA	-24	NA	121230984	121233158	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_+_121231000_121233200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012827	chr10	+	798	3	FSM	ENSMUSG00000053684.9	ENSMUST00000136432.2	2968	3	10	2160	10	-1665	multi-exon	FALSE	canonical	3	27	junction_1	61	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTTAATTTTTGACAAC	NA	False	NA	NA	False	NA	NA	NA	121575852	121586623	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_121576116_121581402_121581522_121586207
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012876	chr10	+	177	1	ISM	ENSMUSG00000078429.10	ENSMUST00000105256.10	4817	8	21076	0	4180	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGACTGGGAGCTGCTT	NA	False	NA	13	True	AATAAA	-19	NA	126835661	126835838	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_126835700_126835800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012882	chr10	-	275	1	ISM	ENSMUSG00000040521.12	ENSMUST00000040560.11	1206	6	8233	1	2490	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAATGTGTGAGTGTGTG	NA	False	NA	-4	True	AATAAA	-23	NA	126858476	126858201	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_-_126858200_126858500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012897	chr10	+	1799	6	FSM	ENSMUSG00000006732.15	ENSMUST00000006915.14	1791	6	-8	0	-8	0	multi-exon	FALSE	canonical	3	356	junction_3	29.1245600825146	448	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGAGTGTTTGCCTG	NA	False	NA	13	True	TTTAAA	-18	NA	126877792	126882234	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880894_126880997_126881147
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012966	chr10	+	381	1	NIC	ENSMUSG00000006728.13	novel	2053	8	NA	NA	852	11	mono-exon	FALSE	NA	NA	NA	NA	NA	3415	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTCCAATTGGCTTT	NA	False	NA	40	True	AAAACA	-38	NA	126902796	126903177	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_+_126902800_126903200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012969	chr10	-	1622	6	FSM	ENSMUSG00000006736.10	ENSMUST00000060991.6	1556	6	-66	0	-66	0	multi-exon	FALSE	canonical	3	545	junction_1	41.1698919114442	262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTCTTGTTTTCCTGTA	NA	False	NA	0	True	AATAAA	-15	NA	126906199	126903148	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_126904060_126904137_126904252_126904348_126904481_126904776_126904858_126905214_126905383_126905983
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000012984	chr10	-	2478	14	FSM	ENSMUSG00000040462.14	ENSMUST00000080975.6	2458	14	-18	-2	-12	2	multi-exon	FALSE	canonical	3	172	junction_9	22.2351605990131	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGGCTCTGTGGGGAGG	NA	False	NA	0	True	AATAAA	-18	NA	126957012	126931516	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_126932242_126932498_126932612_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935481_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013039	chr10	+	494	1	Genic_Genomic	ENSMUSG00000025410.11	novel	NA	NA	NA	NA	4055	4	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAGTTTCAAAATATTCT	NA	False	NA	20	True	AATAAA	-22	NA	127117329	127117823	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_+_127117300_127117800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013052	chr10	+	876	4	NNC	ENSMUSG00000025408.16	novel	890	4	NA	NA	-2	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	303.351281520286	78	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCACTTTTTCTTCTTGCC	NA	False	NA	32	True	AGTAAA	-21	NA	127126659	127132160	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_127126765_127129580_127129629_127131189_127131348_127131595
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013075	chr10	-	222	1	NIC	ENSMUSG00000040354.15	novel	2939	21	NA	NA	1233	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTCCTGGTCTACCCT	4338	False	NA	-6	True	AATAAA	-27	NA	127132311	127132089	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_127132100_127132300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013077	chr10	-	2834	21	NNC	ENSMUSG00000040354.15	novel	2939	21	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	428.105276187996	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGAGCCCTCTCCTGGTCT	NA	False	NA	-11	True	AATAAA	-22	NA	127147551	127132094	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146308_127146404_127147389
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013089	chr10	+	962	4	FSM	ENSMUSG00000040280.11	ENSMUST00000035735.11	934	4	-28	0	-28	0	multi-exon	FALSE	canonical	3	101	junction_1	3.29983164553722	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGCGCCTGCTAATCA	NA	False	NA	NA	False	AATACA	-21	NA	127350807	127353023	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_127350908_127351267_127351357_127352133_127352195_127352311
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013103	chr10	-	561	1	ISM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	4510	193	900	-177	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTTCCTATTACTGTGG	NA	False	NA	-5	True	AATAAA	-14	NA	127353745	127353184	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_-_127353200_127353700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013115	chr10	-	914	3	FSM	ENSMUSG00000025403.6	ENSMUST00000218035.2	722	3	350	-542	346	-178	multi-exon	FALSE	canonical	3	1924	junction_2	53	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127354299	127353185	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_127353786_127353893_127354002_127354093
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013145	chr10	-	1450	5	ISM	ENSMUSG00000025402.13	ENSMUST00000099157.4	2311	6	2099	-1	948	0	3prime_fragment	FALSE	canonical	3	27	junction_1	18.389874931603	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCCCCCTTCCCCTC	NA	False	NA	-1	True	AATAAA	-21	NA	127500402	127496786	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_-_127497649_127499000_127499134_127499218_127499271_127499608_127499743_127500133
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013166	chr10	+	680	6	NNC	ENSMUSG00000025400.12	novel	514	3	NA	NA	-15	0	at_least_one_novel_splicesite	TRUE	canonical	3	36	junction_5	3.96988664825584	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTGATGCAATAGGCTG	NA	False	NA	7	True	AATAAA	-17	NA	127563700	127567637	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_127563897_127564039_127564146_127564315_127564346_127564982_127565037_127565344_127565419_127567417
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013182	chr10	+	187	1	Intergenic	novelGene_39	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTACACCTTATTTTAAG	3426	False	NA	NA	False	NA	NA	NA	127853482	127853669	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr10_+_127853500_127853700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013212	chr10	+	942	8	NNC	ENSMUSG00000061315.15	novel	6745	9	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	4018.5497688716	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTGCTAGATCTTTTCC	4928	False	NA	4	True	AATAAA	-28	NA	127871459	127884506	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_127871553_127872288_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013229	chr10	+	857	8	NNC	ENSMUSG00000061315.15	novel	6745	9	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	4017.53134679108	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTGCTAGATCTTTTCC	4930	False	NA	4	True	AATAAA	-28	NA	127871461	127884506	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_127871553_127872357_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883983_127884113_127884237_127884361
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013252	chr10	+	831	8	NNC	ENSMUSG00000061315.15	novel	885	8	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3981.56060060958	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCAGGTGCTAGATCTT	4946	False	NA	0	True	AATAAA	-24	NA	127871477	127884502	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_127871553_127872357_127872430_127882036_127882123_127882597_127882656_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013290	chr10	+	2000	8	FSM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	0	0	0	0	multi-exon	FALSE	canonical	3	2953	junction_7	394.34461257812	2418	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCAGTGTCACCTTGTTT	846	False	NA	39	True	AATAAA	-40	NA	127894822	127913141	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013311	chr10	+	1769	10	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	-4	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3339.9576215246	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTTTATGTTGCTTCT	NA	False	NA	26	True	AATAAA	-19	NA	127919170	127926146	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921910_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013317	chr10	+	1761	10	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3385.75991069058	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTCTGTTTATGTTGC	NA	False	NA	22	True	AATAAA	-15	NA	127919173	127926142	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_127919323_127919760_127919944_127920170_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013325	chr10	+	1759	10	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3284.25005814789	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTCTGTTTATGTTGC	NA	False	NA	22	True	AATAAA	-15	NA	127919174	127926142	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922284_127924189_127924403_127924825_127925028_127925887
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013367	chr10	+	174	1	ISM	ENSMUSG00000044005.14	ENSMUST00000159440.8	2398	18	15057	48	2858	14	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGCTAAATTTAGTCG	2203	False	NA	27	True	AATAAA	-33	NA	128045651	128045825	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_128045700_128045800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013372	chr10	-	1486	1	NIC	ENSMUSG00000051346.10	novel	1583	2	NA	NA	414	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCTGTCTATAAAATTGC	NA	False	NA	0	True	AATAAA	-41	NA	128047262	128045776	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_128045800_128047300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013393	chr10	+	1332	3	NNC	ENSMUSG00000047631.5	novel	1258	2	NA	NA	-5380	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	2	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAGTATTTATCATTCA	1565	False	NA	NA	False	ATTAAA	-16	NA	128098485	128106022	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_128098581_128104560_128104639_128104863
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013400	chr10	-	202	1	Intergenic	novelGene_40	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGCCACAAAGCAGGCA	NA	False	NA	NA	False	NA	NA	NA	128109135	128108933	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr10_-_128108900_128109100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013407	chr10	-	1505	4	FSM	ENSMUSG00000025383.3	ENSMUST00000026449.3	1360	4	-145	0	-145	0	multi-exon	FALSE	canonical	2	12	junction_1	5.73488351136175	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGGTCTAAATTTCTAA	NA	False	NA	NA	False	NA	NA	NA	128134098	128132007	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_128132845_128132946_128133094_128133358_128133461_128133679
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013412	chr10	+	211	1	ISM	ENSMUSG00000005682.10	ENSMUST00000005825.8	4445	26	17808	0	17745	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128157011	128157222	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_128157000_128157200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013458	chr10	+	1515	1	NIC	ENSMUSG00000005683.9	novel	2926	11	NA	NA	23155	0	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTTGCTCTTACGTA	2095	False	NA	18	True	AATAAA	-18	NA	128196833	128198348	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_+_128196800_128198300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013482	chr10	+	336	1	ISM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	27346	911	23914	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATGCCCTTTCTTTGGCT	3022	False	NA	NA	False	AAGAAA	-39	NA	128274960	128275296	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_128275000_128275300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013487	chr10	+	555	1	Genic_Genomic	ENSMUSG00000025369.16	novel	NA	NA	NA	NA	15419	2	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGGTGCCTCTGTGT	2748	False	NA	48	True	TATAAA	-21	NA	128325488	128326043	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr10_+_128325500_128326000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013506	chr10	-	1670	5	FSM	ENSMUSG00000090841.3	ENSMUST00000217733.2	1668	5	0	-2	0	1	multi-exon	FALSE	canonical	3	2189	junction_2	245.142305610435	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTCTTTCTTTCTTTCC	8245	False	NA	-3	True	AATAAA	-22	NA	128329723	128326727	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_128328006_128328097_128328272_128328470_128328615_128329407_128329436_128329677
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013517	chr10	-	635	6	NNC	ENSMUSG00000090841.3	novel	691	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	973.337022824058	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTTTCTTTCTTT	8245	False	NA	-5	True	AATAAA	-20	NA	128329723	128326729	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_128326903_128327927_128328006_128328097_128328272_128328470_128328607_128329407_128329436_128329677
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013519	chr10	-	501	5	NIC	ENSMUSG00000090841.3	novel	691	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	1074.73679917457	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTTTCTTTCTTT	8243	False	NA	-5	True	AATAAA	-20	NA	128329725	128326729	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_128326903_128327927_128328006_128328097_128328272_128329407_128329436_128329677
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013520	chr10	-	885	5	FSM	ENSMUSG00000090841.3	ENSMUST00000219554.2	790	5	-95	0	0	0	multi-exon	FALSE	canonical	3	2189	junction_3	229.335998046534	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTTTCTTTCTTT	8245	False	NA	-5	True	AATAAA	-20	NA	128329723	128326729	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_128326903_128327927_128328006_128328097_128328272_128328470_128328615_128329407
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013528	chr10	-	595	5	NNC	ENSMUSG00000090841.3	novel	691	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1066.1841714732	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTTTCTTTCTTT	8245	False	NA	-5	True	AATAAA	-20	NA	128329723	128326729	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_128326903_128327927_128328006_128328097_128328272_128328470_128328595_128329677
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013576	chr10	-	105	1	ISM	ENSMUSG00000039810.12	ENSMUST00000040572.10	3721	3	4107	1600	3972	1235	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAATTTCTTTGATGGC	NA	False	NA	-8	True	AATAAA	-23	NA	128379536	128379431	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_-_128379400_128379500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013583	chr10	-	547	2	NNC	ENSMUSG00000093674.8	novel	544	3	NA	NA	3	8	intron_retention	FALSE	canonical	0	0	junction_1	0	3198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGTTTTTTTGCGGTTCC	NA	False	NA	-10	True	AATAAA	-37	NA	128385025	128383974	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_128384299_128384802
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013599	chr10	-	599	3	NNC	ENSMUSG00000093674.8	novel	680	3	NA	NA	-20	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3537.5	1591	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTACGTGTTTTTTTGCGGT	NA	False	NA	-13	True	AATAAA	-34	NA	128385194	128383977	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_128384299_128384802_128384843_128384956
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013612	chr10	-	505	2	NNC	ENSMUSG00000093674.8	novel	544	3	NA	NA	-6	1	intron_retention	FALSE	canonical	0	0	junction_1	0	430	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTACGTGTTTTTTTG	NA	False	NA	-17	True	AATAAA	-30	NA	128384987	128383981	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_128384299_128384799
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013624	chr10	-	388	4	NNC	ENSMUSG00000093674.8	novel	582	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6259.6041585888	71	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	False	NA	-18	True	AATAAA	-29	NA	128384987	128383982	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_128384292_128384526_128384550_128384817_128384843_128384956
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013631	chr10	-	517	4	NNC	ENSMUSG00000093674.8	novel	582	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	856	junction_1	5923.32915025176	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	False	NA	-18	True	AATAAA	-29	NA	128384987	128383982	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_128384299_128384404_128384550_128384817_128384843_128384956
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013634	chr10	-	1111	2	Fusion	ENSMUSG00000093674.8_ENSMUSG00000118400.2	novel	544	3	NA	NA	-90	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	9864	False	NA	-18	True	AATAAA	-29	NA	128512608	128383982	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr10_-_128384299_128511813
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013636	chr10	-	1113	5	Fusion	ENSMUSG00000093674.8_ENSMUSG00000118400.2	novel	582	4	NA	NA	-90	0	multi-exon	FALSE	canonical	0	0	junction_4	8421.22701867133	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	9864	False	NA	-18	True	AATAAA	-29	NA	128512608	128383982	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr10_-_128384299_128384526_128384550_128384817_128384843_128384956_128385005_128511907
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013638	chr10	-	516	2	NNC	ENSMUSG00000093674.8	novel	544	3	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	False	NA	-18	True	AATAAA	-29	NA	128384983	128383982	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_128384299_128384783
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013641	chr10	-	422	4	NNC	ENSMUSG00000093674.8	novel	582	4	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	9325.94091767689	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	False	NA	-18	True	AATAAA	-29	NA	128385185	128383982	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_128384299_128384526_128384550_128384817_128384843_128385127
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013643	chr10	-	397	4	NNC	ENSMUSG00000093674.8	novel	582	4	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9329.97781347844	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	False	NA	-18	True	AATAAA	-29	NA	128385205	128383982	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_128384299_128384526_128384550_128384817_128384843_128385172
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013644	chr10	-	460	4	NNC	ENSMUSG00000093674.8	novel	582	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9325.46107290263	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	False	NA	-18	True	AATAAA	-29	NA	128384983	128383982	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_128384299_128384526_128384550_128384748_128384843_128384956
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013656	chr10	-	444	3	NNC	ENSMUSG00000093674.8	novel	582	4	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3537.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	False	NA	-18	True	AATAAA	-29	NA	128385025	128383982	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_128384299_128384783_128384843_128384956
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013663	chr10	-	521	4	NNC	ENSMUSG00000093674.8	novel	582	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	9321.25514915001	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	False	NA	-18	True	AATAAA	-29	NA	128384983	128383982	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_128384299_128384526_128384550_128384687_128384843_128384956
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013668	chr10	-	476	2	NNC	ENSMUSG00000093674.8	novel	582	4	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	False	NA	-18	True	AATAAA	-29	NA	128385081	128383982	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_128384299_128384921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013719	chr10	-	476	2	NNC	ENSMUSG00000093674.8	novel	582	4	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	False	NA	-18	True	AATAAA	-29	NA	128385054	128383982	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_128384349_128384944
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013721	chr10	-	438	2	NNC	ENSMUSG00000093674.8	novel	695	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	False	NA	-18	True	AATAAA	-29	NA	128385028	128383982	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_128384349_128384956
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013777	chr10	-	454	4	NNC	ENSMUSG00000025362.7	novel	681	4	NA	NA	19	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8754.3210029232	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGTTTATGTCGAGAC	NA	False	NA	-1	True	NA	NA	NA	128462374	128460394	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_128460506_128461071_128461207_128461931_128462110_128462344
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013804	chr10	-	455	4	NNC	ENSMUSG00000025362.7	novel	681	4	NA	NA	23	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	8982.36514263118	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCATCGGAGTGTGTTT	NA	False	NA	-11	True	NA	NA	NA	128462370	128460404	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_128460506_128461075_128461207_128461931_128462129_128462344
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013806	chr10	-	560	4	NNC	ENSMUSG00000025362.7	novel	681	4	NA	NA	43	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	8984.1729477763	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCATCGGAGTGTGTTT	NA	False	NA	-11	True	NA	NA	NA	128462350	128460404	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_128460506_128461075_128461207_128461931_128462110_128462200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013807	chr10	-	1161	3	NIC	ENSMUSG00000025362.7	novel	681	4	NA	NA	23	1	intron_retention	FALSE	canonical	3	11844	junction_2	1651.5	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCATCGGAGTGTGTTT	NA	False	NA	-11	True	NA	NA	NA	128462370	128460404	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_128460506_128461075_128462110_128462344
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013810	chr10	-	426	4	NNC	ENSMUSG00000025362.7	novel	681	4	NA	NA	23	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8985.52882262487	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCATCGGAGTGTGTTT	NA	False	NA	-11	True	NA	NA	NA	128462370	128460404	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_128460506_128461075_128461207_128461931_128462096_128462340
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013811	chr10	-	309	3	NIC	ENSMUSG00000025362.7	novel	681	4	NA	NA	19	1	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	5907	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCATCGGAGTGTGTTT	NA	False	NA	-11	True	NA	NA	NA	128462374	128460404	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_128460506_128461931_128462110_128462344
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013814	chr10	-	423	4	NNC	ENSMUSG00000025362.7	novel	681	4	NA	NA	23	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6503.17660839685	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCATCGGAGTGTGTTT	NA	False	NA	-11	True	NA	NA	NA	128462370	128460404	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_128460506_128461075_128461190_128461927_128462110_128462344
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013818	chr10	-	1564	5	Fusion	ENSMUSG00000025362.7_ENSMUSG00000045055.6	novel	681	4	NA	NA	-74	1	multi-exon	FALSE	canonical	0	0	junction_4	7783.0833382407	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCATCGGAGTGTGTTT	NA	False	NA	-11	True	NA	NA	NA	128613193	128460404	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr10_-_128460506_128461075_128461207_128461931_128462110_128462344_128462424_128612118
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013823	chr10	-	1396	2	ISM	ENSMUSG00000025362.7	ENSMUST00000219591.2	596	3	-77	2	23	1	intron_retention	FALSE	canonical	3	15147	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCATCGGAGTGTGTTT	NA	False	NA	-11	True	NA	NA	NA	128462370	128460404	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_-_128460506_128461075
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013831	chr10	-	429	4	NNC	ENSMUSG00000025362.7	novel	681	4	NA	NA	23	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8985.52882262487	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCATCGGAGTGTGTTT	NA	False	NA	-11	True	NA	NA	NA	128462370	128460404	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_-_128460506_128461075_128461207_128461931_128462099_128462340
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013849	chr10	-	1006	3	NIC	ENSMUSG00000025362.7	novel	681	4	NA	NA	23	1	intron_retention	FALSE	canonical	3	11844	junction_2	4779.5	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCATCGGAGTGTGTTT	NA	False	NA	-11	True	NA	NA	NA	128462370	128460404	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_128461207_128461931_128462110_128462344
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013859	chr10	+	1796	2	Antisense	novelGene_ENSMUSG00000045055.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGCTATAAATATTTTTT	NA	False	NA	NA	False	NA	NA	NA	128511953	128613193	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr10_+_128512640_128612083
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013898	chr10	+	1310	3	NNC	ENSMUSG00000064030.16	novel	1158	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	127.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCAGGCTTTGGCTCT	NA	False	NA	NA	False	AATAAA	-16	NA	128583757	128602433	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_128583868_128601015_128601261_128601478
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013931	chr10	-	1127	4	FSM	ENSMUSG00000025353.6	ENSMUST00000219215.2	1051	4	-9	-67	-9	67	multi-exon	FALSE	canonical	3	10	junction_3	384.57248991575	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTCTACTCCTTTGG	NA	False	NA	2	True	TATAAA	-19	NA	128657484	128654283	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr10_-_128654885_128655822_128655975_128656129_128656430_128657410
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013961	chr10	+	987	12	NNC	ENSMUSG00000078427.4	novel	918	11	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	3	390	junction_1	1520.20222121546	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTAGGTGTTCCTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	128657762	128713502	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_128657841_128660647_128660701_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013970	chr10	+	917	11	NNC	ENSMUSG00000078427.4	novel	1084	12	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1504.94254043136	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTATTAGGTGTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	128657769	128713498	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_128657841_128669180_128669281_128674318_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000013980	chr10	+	918	11	NNC	ENSMUSG00000078427.4	novel	1084	12	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1593.49827737591	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTATTAGGTGTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	128657775	128713498	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr10_+_128657841_128669180_128669281_128674315_128674360_128675670_128675739_128682400_128682457_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014043	chr10	+	992	7	NIC	ENSMUSG00000025351.15	novel	1063	8	NA	NA	-46	1	intron_retention	FALSE	canonical	3	3700	junction_1	246.151996854699	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGGTCTCAGTTTATCT	531	False	NA	36	True	ATTAAA	-28	NA	128745744	128748692	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_+_128745828_128746263_128746341_128747320_128747510_128747663_128747933_128748029_128748171_128748306_128748391_128748543
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014074	chr10	+	781	7	NIC	ENSMUSG00000025351.15	novel	1063	8	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	55	junction_6	1440.35791269624	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGGTCTCAGTTTATC	559	False	NA	35	True	ATTAAA	-27	NA	128745772	128748691	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_+_128745828_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748543
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014098	chr10	+	823	7	ISM	ENSMUSG00000025351.15	ENSMUST00000026407.9	1063	8	683	-7	-240	0	3prime_fragment	FALSE	canonical	3	3705	junction_4	220.245065526765	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGGTCTCAGTTTATC	1037	False	NA	35	True	ATTAAA	-27	NA	128746250	128748691	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr10_+_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014110	chr10	-	189	1	NIC	ENSMUSG00000025350.16	novel	701	4	NA	NA	-804	-1493	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTGTTTGAAGGAGT	NA	False	NA	0	True	AATAAA	-20	NA	128755970	128755781	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr10_-_128755800_128756000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014140	chr10	+	188	1	Intergenic	novelGene_41	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATC	NA	False	NA	5	True	NA	NA	NA	130412150	130412338	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr10_+_130412200_130412300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014143	chr11	-	704	5	ISM	ENSMUSG00000023764.19	ENSMUST00000138126.8	2916	22	-42	44335	0	6301	5prime_fragment	FALSE	canonical	3	72	junction_1	15.833114033569	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGAGCATAAGTGAATC	7979	False	NA	NA	False	AGTAAA	-33	NA	3143463	3129266	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014158	chr11	-	1642	9	NNC	ENSMUSG00000020457.14	novel	1546	9	NA	NA	-70	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	652.861394171841	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTGAGGTTTGCTGTG	NA	False	NA	-1	True	TATAAA	-34	NA	3216485	3199906	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214762_3214891_3216268
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014164	chr11	-	1538	9	NNC	ENSMUSG00000020457.14	novel	1546	9	NA	NA	0	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	655.729936788004	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTCGTTATTCATGTG	NA	False	NA	-13	True	TATAAA	-22	NA	3216393	3199918	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209301_3209376_3212488_3212665_3214766_3214891_3216268
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014236	chr11	+	1028	4	FSM	ENSMUSG00000075702.11	ENSMUST00000131865.2	972	4	165	-221	0	0	multi-exon	FALSE	canonical	3	143	junction_3	5.71547606649408	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGAGTCTCTTCTTATTT	NA	False	NA	22	True	ACTAAA	-14	NA	3464866	3467351	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_3465074_3466260_3466297_3466485_3466921_3467001
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014243	chr11	-	968	1	ISM	ENSMUSG00000056579.19	ENSMUST00000132077.4	6719	2	6775	9	6371	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGAGTTGGGTTTCTATT	NA	False	NA	NA	False	NA	NA	NA	3590761	3589793	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_3589800_3590800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014265	chr11	+	2162	15	FSM	ENSMUSG00000020430.13	ENSMUST00000020705.5	2911	15	-29	778	-29	-778	multi-exon	FALSE	canonical	3	864	junction_12	97.3847042006336	1570	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTCAGAAGCCTCC	NA	False	NA	30	True	NA	NA	NA	3913945	3929226	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014279	chr11	-	489	1	ISM	ENSMUSG00000004748.6	ENSMUST00000004868.6	1411	4	3477	0	3172	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTTTCATTTCCTCTT	NA	False	NA	1	True	AATAAA	-17	NA	4041968	4041479	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_4041500_4042000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014286	chr11	-	380	1	ISM	ENSMUSG00000003585.14	ENSMUST00000003681.8	2631	12	21413	0	11593	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGAATTCATTGCCCAT	NA	False	NA	0	True	AATAAA	-22	NA	4047418	4047038	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_4047000_4047400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014296	chr11	+	1926	9	FSM	ENSMUSG00000034412.14	ENSMUST00000180088.2	1921	9	0	-5	0	2	multi-exon	FALSE	canonical	3	291	junction_8	26.2963875846094	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTATAGTTAGGACCC	1582	False	NA	26	True	AATAAA	-17	NA	4136821	4165507	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_4137100_4155756_4155857_4159925_4160034_4162140_4162248_4162784_4162900_4162977_4163044_4163556_4163747_4163836_4163992_4164700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014300	chr11	+	1587	9	FSM	ENSMUSG00000020424.4	ENSMUST00000020699.4	1574	9	0	-13	0	13	multi-exon	FALSE	canonical	3	115	junction_3	11.4229757506527	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCGTCATGTCTTGGTC	7118	False	NA	30	True	AATAAA	-38	NA	4168224	4172422	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_4168427_4168947_4169019_4170107_4170293_4170374_4170508_4170682_4170807_4171145_4171260_4171423_4171507_4171600_4171696_4171842
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014311	chr11	+	541	1	Genic_Genomic	ENSMUSG00000058755.4	novel	NA	NA	NA	NA	4067	1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTCAGTCTTTTATT	3615	False	NA	6	True	TTTAAA	-19	NA	4190486	4191027	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_+_4190500_4191000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014337	chr11	+	205	1	Intergenic	novelGene_42	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAGCATTGACAGCCAG	NA	False	NA	NA	False	AAAAAG	-4	NA	4537929	4538134	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_+_4537900_4538100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014354	chr11	-	603	2	Antisense	novelGene_ENSMUSG00000020412.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTACTTCTGATTTTATT	NA	False	NA	NA	False	AAGAAA	-20	NA	4644794	4635417	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr11_-_4635880_4644653
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014419	chr11	+	794	6	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	279.455613649109	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGCCTGTCTCTCTTG	NA	False	NA	13	True	TATAAA	-16	NA	4654670	4687669	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_4654713_4672357_4672516_4678584_4678648_4680186_4680268_4682066_4682179_4687331
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014421	chr11	+	718	6	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	265.110844742345	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGCCTGTCTCTCTTG	NA	False	NA	13	True	TATAAA	-16	NA	4654670	4687669	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_4654713_4672429_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014427	chr11	+	777	6	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	291.453323878799	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGCCTGTCTCTCTTG	NA	False	NA	13	True	TATAAA	-16	NA	4654670	4687669	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_4654722_4672357_4672490_4678584_4678648_4680186_4680268_4682066_4682179_4687331
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014452	chr11	-	1260	1	ISM	ENSMUSG00000009073.17	ENSMUST00000109910.9	4720	16	82432	0	18003	0	mono-exon	FALSE	NA	NA	NA	NA	NA	337	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTCGAGTTTTTTTTTT	NA	False	NA	-8	True	AATAAA	-21	NA	4717104	4715844	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_4715800_4717100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014540	chr11	-	963	1	ISM	ENSMUSG00000020482.5	ENSMUST00000020776.5	3372	5	11301	1037	11301	-1037	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGAAGCCAGCTACTTG	NA	False	NA	-6	True	NA	NA	NA	5480886	5479923	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_5479900_5480900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014602	chr11	-	861	3	FSM	ENSMUSG00000020475.4	ENSMUST00000020768.4	840	3	-18	-3	-18	3	multi-exon	FALSE	canonical	3	39	junction_1	6	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACGTTTCATATAGCTGAG	8630	False	NA	NA	False	AATAAA	-18	NA	5753751	5751636	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_5751840_5752998_5753180_5753274
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014609	chr11	-	1610	11	FSM	ENSMUSG00000020471.12	ENSMUST00000102922.10	1646	11	36	0	36	0	multi-exon	FALSE	canonical	3	869	junction_10	541.870242770352	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTCACTTGGGCATGT	9541	False	NA	2	True	AATAAA	-25	NA	5828256	5822179	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712_5826990_5828191
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014610	chr11	-	1615	11	NNC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	3	295	junction_10	702.611101534839	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTCACTTGGGCATGT	9540	False	NA	2	True	AATAAA	-25	NA	5828257	5822179	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712_5826990_5828187
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014639	chr11	-	751	6	ISM	ENSMUSG00000020469.9	ENSMUST00000102921.4	590	7	60	0	60	0	3prime_fragment	FALSE	canonical	3	38	junction_4	23.9115035077261	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTGTTGGCTTGACTG	NA	False	NA	2	True	AATAAA	-20	NA	5848722	5846636	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_5846782_5847125_5847175_5847319_5847399_5847831_5847937_5848159_5848236_5848425
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014641	chr11	-	284	3	ISM	ENSMUSG00000020469.9	ENSMUST00000102921.4	590	7	1373	0	1373	0	3prime_fragment	FALSE	canonical	3	94	junction_2	1.5	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTGTTGGCTTGACTG	NA	False	NA	2	True	AATAAA	-20	NA	5847409	5846636	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_5846782_5847125_5847175_5847319
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014655	chr11	+	1365	1	ISM	ENSMUSG00000002741.10	ENSMUST00000002818.9	2541	7	10723	0	7112	0	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTCTTGTGTTTACTTT	NA	False	NA	19	True	GATAAA	-20	NA	5916415	5917780	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_5916400_5917800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014660	chr11	-	726	1	Genic_Genomic	ENSMUSG00000057897.15	novel	NA	NA	NA	NA	13777	8	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCCAGTACAGCTGAG	NA	False	NA	NA	False	NA	NA	NA	5920361	5919635	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_5919600_5920400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014663	chr11	-	3421	6	FSM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	215	291	215	4	multi-exon	FALSE	canonical	3	343	junction_5	15.4090882274066	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCTGTCTGTGACAGT	9673	False	NA	-2	True	AATAAA	-18	NA	6150200	6055981	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494_6100628_6143153_6143477_6149942
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014678	chr11	-	1961	14	FSM	ENSMUSG00000004393.11	ENSMUST00000004507.11	1956	14	-5	0	-5	0	multi-exon	FALSE	canonical	3	937	junction_7	74.9654752883426	316	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGTTGTCTGGCTCTG	4484	False	NA	-2	True	NA	NA	NA	6217777	6208918	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014698	chr11	-	2013	5	FSM	ENSMUSG00000004394.13	ENSMUST00000004508.13	2003	5	-10	0	-10	0	multi-exon	FALSE	canonical	3	418	junction_4	49.7663289785373	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTCTCCCTTTGTTTT	5328	False	NA	NA	False	ATTAAA	-24	NA	6224880	6220368	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224673
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014705	chr11	-	1810	4	FSM	ENSMUSG00000004394.13	ENSMUST00000130621.2	886	4	23	-947	18	-345	multi-exon	FALSE	canonical	3	463	junction_2	40.4337592722825	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGATGTGAAATAATAGAT	5361	False	NA	-1	True	AATAAA	-16	NA	6224847	6220713	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014733	chr11	+	801	5	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16349.7512519304	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTTGTATTGGAG	NA	False	NA	2	True	AATAAA	-19	NA	6365815	6369817	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_6365980_6368100_6368136_6368225_6368315_6369112_6369286_6369477
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014746	chr11	+	739	5	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16233.0718596327	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTTGTATTGGAG	NA	False	NA	2	True	AATAAA	-19	NA	6365866	6369817	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_6365980_6368100_6368132_6368225_6368308_6369112_6369286_6369477
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014751	chr11	+	757	5	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16128.6470914333	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTTGTATTGGAG	NA	False	NA	2	True	AATAAA	-19	NA	6365867	6369817	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_6365992_6368100_6368132_6368225_6368315_6369112_6369286_6369477
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014802	chr11	+	463	1	FSM	ENSMUSG00000079988.3	ENSMUST00000116105.3	320	1	-32	-111	-32	111	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGAAGCAAATGTCACAA	1041	False	NA	6	True	AATAAA	-34	NA	6396185	6396648	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_6396200_6396600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014833	chr11	-	229	1	NIC	ENSMUSG00000085156.9	novel	771	3	NA	NA	1940	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTGATCGGGTTTGA	228	False	NA	-1	True	NA	NA	NA	6475819	6475590	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_6475600_6475800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014862	chr11	-	919	4	FSM	ENSMUSG00000000384.16	ENSMUST00000131815.8	853	4	-51	-15	-6	15	multi-exon	FALSE	canonical	3	41	junction_1	235.927013195936	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTGATTCTGCAGC	NA	False	NA	3	True	AATAAA	-21	NA	6576073	6573184	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_6573462_6573815_6574284_6575148_6575214_6575964
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014881	chr11	-	163	1	ISM	ENSMUSG00000020413.12	ENSMUST00000129115.2	4172	9	17861	0	17379	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAATTCATTTATTAAT	NA	False	NA	92	True	AATAAA	-21	NA	8943299	8943136	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_8943100_8943300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014892	chr11	+	1457	9	FSM	ENSMUSG00000020407.14	ENSMUST00000101525.9	1157	9	-299	-1	-295	1	multi-exon	FALSE	canonical	3	102	junction_1	904.856126339983	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGACTCTGCGGTAGAG	NA	False	NA	27	True	AATAAA	-21	NA	9067807	9086171	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_9068163_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014904	chr11	+	1224	9	NNC	ENSMUSG00000020407.14	novel	1252	9	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	934.618697317254	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGACTCTGCGGTAGAG	NA	False	NA	27	True	AATAAA	-21	NA	9068532	9086171	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_9068661_9069373_9069450_9075632_9075699_9079487_9079600_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014910	chr11	+	994	8	NNC	ENSMUSG00000020407.14	novel	1252	9	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	968.667525784881	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGACTCTGCGGTAGA	NA	False	NA	26	True	AATAAA	-20	NA	9068536	9086170	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_9068661_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081681_9084729_9084932_9085163_9085311_9085960
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014941	chr11	+	1202	9	NNC	ENSMUSG00000020407.14	novel	518	6	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	932.389931506663	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGACTCTGCGGTAGA	NA	False	NA	26	True	AATAAA	-20	NA	9068733	9086170	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_9068835_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014959	chr11	+	213	1	NIC	ENSMUSG00000020407.14	novel	1157	9	NA	NA	2943	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGACTCTGCGGTAGA	NA	False	NA	26	True	AATAAA	-20	NA	9085957	9086170	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_9086000_9086200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014983	chr11	-	1091	5	NNC	ENSMUSG00000020182.17	novel	1922	15	NA	NA	-6411	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	46.0271658914602	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTGAGTAAGCGTCTT	NA	False	NA	-1	True	AATAAA	-21	NA	11779332	11764100	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11779077
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014987	chr11	-	1017	5	NNC	ENSMUSG00000020182.17	novel	1922	15	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	42.6438741204408	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTGAGTAAGCGTCTT	NA	False	NA	-1	True	AATAAA	-21	NA	11772959	11764100	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11772778
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000014988	chr11	-	997	5	NNC	ENSMUSG00000020182.17	novel	1922	15	NA	NA	228	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	40.5362492098122	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTGAGTAAGCGTCTT	NA	False	NA	-1	True	AATAAA	-21	NA	11772693	11764100	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11772532
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015010	chr11	+	1058	3	NNC	ENSMUSG00000086391.2	novel	1075	4	NA	NA	14013	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	3	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTGTAAATATTTTATTT	2732	False	NA	NA	False	NA	NA	NA	11832135	11835321	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_11832389_11832956_11833080_11834639
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015020	chr11	-	844	1	ISM	ENSMUSG00000020173.18	ENSMUST00000172919.8	2566	8	227285	68	132121	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	False	NA	-1	True	AATAAA	-20	NA	12187519	12186675	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_12186700_12187500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015024	chr11	+	468	1	FSM	ENSMUSG00000081631.2	ENSMUST00000121451.2	379	1	-22	-67	-22	67	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCATAGAAAATTCTGATA	NA	False	NA	NA	False	AATAAA	-26	NA	14112056	14112524	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_14112100_14112500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015061	chr11	-	950	4	FSM	ENSMUSG00000087060.8	ENSMUST00000139493.8	941	4	-4	-5	-4	0	multi-exon	FALSE	canonical	3	10	junction_1	8.73053390247253	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTGTATCGTTTATTT	NA	False	NA	NA	False	ATTAAA	-21	NA	16901122	16885153	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_16885842_16886454_16886565_16900881_16900931_16901019
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015069	chr11	+	1835	1	Genic_Genomic	ENSMUSG00000033953.11	novel	NA	NA	NA	NA	5704	7	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGTGTCAGCTTTGAT	NA	False	NA	18	True	AATAAA	-22	NA	17148547	17150382	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_+_17148500_17150400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015086	chr11	+	2059	8	FSM	ENSMUSG00000078970.6	ENSMUST00000046955.7	2002	8	-49	-8	-49	8	multi-exon	FALSE	canonical	3	217	junction_1	21.86601127274	239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGCGTTGATTCTTTCC	2422	False	NA	16	True	AATAAA	-18	NA	17161868	17183804	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_17162147_17169013_17169115_17172196_17172328_17174548_17174651_17177160_17177277_17178140_17178276_17179768_17179867_17182706
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015136	chr11	-	1981	1	ISM	ENSMUSG00000020152.8	ENSMUST00000000137.8	3631	9	48629	0	48583	0	mono-exon	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAATTTTGTCTTTTTCT	NA	False	NA	-4	True	AATAAA	-19	NA	20014284	20012303	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_20012300_20014300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015160	chr11	-	317	2	Intergenic	novelGene_43	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	67	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAACATGTTGTTTTTCT	1020	False	NA	NA	False	AATAAA	-19	NA	20088622	20087214	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_-_20087398_20088488
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015170	chr11	-	849	3	NNC	ENSMUSG00000085035.2	novel	627	2	NA	NA	-7432	190	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCTTGGCCTCCATTAT	9124	False	NA	NA	False	NA	NA	NA	20103776	20095376	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_20095695_20101422_20101772_20103594
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015180	chr11	+	2986	6	FSM	ENSMUSG00000020149.18	ENSMUST00000020358.12	2827	6	-159	0	-159	0	multi-exon	FALSE	canonical	3	1848	junction_1	130.08397287906	2535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCGCTTGTTGGGTCTAT	NA	False	NA	NA	False	AATAAA	-24	NA	20151272	20176856	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_20151653_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015191	chr11	+	1438	6	NNC	ENSMUSG00000020149.18	novel	2827	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	821.738011777476	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGTGATAAGTATTG	NA	False	NA	16	True	AATAAA	-29	NA	20151432	20175464	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_20151657_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015215	chr11	-	316	1	NIC	ENSMUSG00000044066.15	novel	4804	7	NA	NA	10682	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTAGCTCAGTTGACT	NA	False	NA	-8	True	AATAAA	-17	NA	20188701	20188385	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_20188400_20188700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015216	chr11	-	2780	3	FSM	ENSMUSG00000044066.15	ENSMUST00000162811.2	2788	3	9	-1	-2	0	multi-exon	FALSE	canonical	3	111	junction_1	11	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTAGCTCAGTTGACT	3053	False	NA	-8	True	AATAAA	-17	NA	20199420	20188385	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_20190699_20191885_20192239_20199306
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015223	chr11	-	1001	2	Genic_Genomic	ENSMUSG00000083792.2	novel	321	1	NA	NA	-156476	1	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTCATAGAATCCTGGC	NA	False	NA	NA	False	ATTAAA	-29	NA	20396859	20240061	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_20240510_20396306
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015224	chr11	-	1755	2	Genic_Genomic	ENSMUSG00000078965.6_ENSMUSG00000083792.2	novel	1002	1	NA	NA	-73	1	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTCATAGAATCCTGGC	4388	False	NA	NA	False	ATTAAA	-29	NA	20286086	20240061	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_20240510_20284779
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015233	chr11	-	1763	2	Genic_Genomic	ENSMUSG00000078965.6_ENSMUSG00000083792.2	novel	1002	1	NA	NA	-73	1	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTCATAGAATCCTGGC	4388	False	NA	NA	False	ATTAAA	-29	NA	20286086	20240061	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_20240518_20284779
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015237	chr11	-	904	1	ISM	ENSMUSG00000020142.13	ENSMUST00000109594.8	3926	8	29605	25	29576	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGTAACGTGTTTTTC	NA	False	NA	-5	True	NA	NA	NA	20253108	20252204	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_20252200_20253100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015241	chr11	-	923	2	NNC	ENSMUSG00000020142.13	novel	3926	8	NA	NA	0	-29276	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGTTGCCCAGCTACGTG	7761	False	NA	NA	False	AATAAA	-21	NA	20282713	20281480	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_20281636_20281945
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015282	chr11	+	1169	1	ISM	ENSMUSG00000020128.16	ENSMUST00000006221.14	4323	23	80675	12	5875	2	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAAGGCAACTTTTTTC	4956	False	NA	21	True	AATAAA	-17	NA	21269955	21271124	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_21270000_21271100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015285	chr11	-	2157	10	FSM	ENSMUSG00000001891.17	ENSMUST00000060895.6	2044	10	-108	-5	-108	5	multi-exon	TRUE	canonical	3	305	junction_7	61.1714853284106	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTAGTGCTCACTCTT	NA	False	NA	-2	True	AATAAA	-26	NA	21321309	21271667	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21321014
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015303	chr11	-	1283	9	NNC	ENSMUSG00000020321.17	novel	1958	9	NA	NA	119	-455	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_5	471.891655335205	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCAGACTCTGTTTCTA	NA	False	NA	-8	True	AATAAA	-19	NA	21521815	21507241	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698_21509876_21512864_21512988_21514046_21514217_21515823_21515921_21516619_21516719_21521729
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015305	chr11	-	1284	9	NNC	ENSMUSG00000020321.17	novel	1958	9	NA	NA	118	-455	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	459.37675169734	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCAGACTCTGTTTCTA	NA	False	NA	-8	True	AATAAA	-19	NA	21521816	21507241	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_21507569_21508461_21508546_21509191_21509306_21509698_21509876_21512864_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015308	chr11	-	1294	9	NNC	ENSMUSG00000020321.17	novel	1958	9	NA	NA	119	-455	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	471.867814514828	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCAGACTCTGTTTCTA	NA	False	NA	-8	True	AATAAA	-19	NA	21521815	21507241	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_21507569_21508456_21508552_21509191_21509306_21509698_21509876_21512864_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015322	chr11	-	579	1	Genic_Genomic	ENSMUSG00000042302.15	novel	NA	NA	NA	NA	165007	3	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCTGCAATTTATTTCC	NA	False	NA	0	True	AATAAA	-24	NA	21956403	21955824	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_21955800_21956400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015346	chr11	+	1137	2	NNC	ENSMUSG00000092626.2	novel	663	2	NA	NA	937	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGTGTACTTGATTAAC	NA	False	NA	NA	False	AATAAA	-20	NA	22809867	22811264	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_22810580_22810839
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015360	chr11	-	754	3	NNC	ENSMUSG00000051355.19	novel	4508	3	NA	NA	932	18	at_least_one_novel_splicesite	FALSE	canonical	2	95	junction_2	997	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTCAAAGTCCAATCTTG	NA	False	NA	-13	True	AATATA	-28	NA	22921927	22849740	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_22850058_22906410_22906693_22921772
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015387	chr11	+	1927	14	NNC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	0	186	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1431.47425144303	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAACTTGTCATTTTAAA	NA	False	NA	20	True	ATTAAA	-20	NA	22940625	22953337	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951566_22951691_22952166_22952402_22952816_22952931_22953136
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015400	chr11	+	202	1	NIC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	1202	186	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAACTTGTCATTTTAAA	NA	False	NA	20	True	ATTAAA	-20	NA	22953135	22953337	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_22953100_22953300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015447	chr11	+	1441	11	NIC	ENSMUSG00000004018.10	novel	2724	14	NA	NA	-1	2	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	77.436167260525	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAGTCATTAACACCCCT	NA	False	NA	15	True	AATAAA	-17	NA	26337200	26421878	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_26337311_26347745_26347805_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420876_26420949_26421324
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015488	chr11	+	2569	28	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	125.489275633577	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTATATCTTAGGAAA	NA	False	NA	10	True	AATAAA	-22	NA	29080743	29111682	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103343_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015518	chr11	-	803	1	NIC	ENSMUSG00000032673.6	novel	2126	3	NA	NA	1353	0	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGTGTCTTTAATTTG	NA	False	NA	-1	True	AATAAA	-23	NA	29463678	29462875	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_29462900_29463700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015601	chr11	-	1241	4	NIC	ENSMUSG00000020460.16	novel	791	6	NA	NA	-2	0	intron_retention	FALSE	canonical	3	7569	junction_3	4108.24983011825	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTATTGTGCTTTATTG	NA	False	NA	-31	True	AATAAA	-16	NA	29497862	29495845	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_29496030_29496290_29497261_29497680_29497746_29497840
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015611	chr11	-	588	6	NNC	ENSMUSG00000020460.16	novel	791	6	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6412.33176309523	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTATTGTGCTTTATTG	NA	False	NA	-31	True	AATAAA	-16	NA	29497896	29495845	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_29496030_29496290_29496423_29496702_29496789_29497201_29497261_29497680_29497746_29497834
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015641	chr11	-	531	6	NNC	ENSMUSG00000020460.16	novel	791	6	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5362.30439270282	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTATTGTGCTTTATTG	NA	False	NA	-31	True	AATAAA	-16	NA	29497865	29495845	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_29496030_29496290_29496423_29496702_29496769_29497201_29497261_29497680_29497746_29497840
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015643	chr11	-	610	4	NNC	ENSMUSG00000020460.16	novel	637	5	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6862.45652485723	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTATTGTGCTTTATTG	NA	False	NA	-31	True	AATAAA	-16	NA	29497838	29495845	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_29496030_29496290_29496423_29496702_29496789_29497630
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015700	chr11	+	837	1	ISM	ENSMUSG00000020458.17	ENSMUST00000078830.11	3615	7	49134	1414	1083	1	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTTTAGTGTTTTAG	NA	False	NA	15	True	AATAAA	-15	NA	29692080	29692917	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_29692100_29692900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015711	chr11	-	688	3	NNC	ENSMUSG00000060923.6	novel	863	4	NA	NA	181	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTACTGTTGCCTA	NA	False	NA	NA	False	AATAAA	-15	NA	30599406	30455990	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_30456440_30582207_30582341_30599300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015735	chr11	-	1331	3	FSM	ENSMUSG00000020309.7	ENSMUST00000101394.5	1315	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	30	junction_1	6	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTAAGTGTCATTTCT	NA	False	NA	NA	False	AATAAA	-33	NA	30936366	30926706	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_30927747_30929564_30929601_30936111
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015743	chr11	-	1841	4	FSM	ENSMUSG00000020303.3	ENSMUST00000020546.3	3940	4	-33	2132	-33	-1453	multi-exon	FALSE	canonical	3	131	junction_2	14.613540144522	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTGGGTCACAAAAACCA	NA	False	NA	NA	False	AATAAA	-17	NA	31320107	31309438	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_31310529_31315331_31315544_31317725_31317869_31319711
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015755	chr11	+	522	1	Intergenic	novelGene_44	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCATGTGTGGATTTTCG	NA	False	NA	NA	False	AATAAA	-19	NA	31622033	31622555	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_+_31622000_31622600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015760	chr11	+	1466	5	FSM	ENSMUSG00000020299.7	ENSMUST00000102829.4	2000	5	-6	540	-6	-540	multi-exon	FALSE	canonical	3	12	junction_4	0.707106781186548	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTGAACAGCAGATGTG	2278	False	NA	NA	False	AATATA	-45	NA	31915585	31929111	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_31915952_31923555_31923642_31925036_31925136_31926785_31926831_31928241
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015776	chr11	+	805	5	NIC	ENSMUSG00000040767.11	novel	821	5	NA	NA	11	12	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	178.047044345027	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATAGTACTCTGTACTGG	NA	False	NA	33	True	AATAAA	-34	NA	32155425	32158996	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_32155664_32156959_32157051_32157573_32157663_32158333_32158409_32158684
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015779	chr11	+	815	5	NIC	ENSMUSG00000040767.11	novel	821	5	NA	NA	11	12	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	179.342375081853	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATAGTACTCTGTACTGG	NA	False	NA	33	True	AATAAA	-34	NA	32155425	32158996	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_32155664_32156959_32157044_32157556_32157663_32158333_32158409_32158684
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015809	chr11	+	1048	4	NNC	ENSMUSG00000020287.16	novel	1737	4	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	161.765948895997	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGTCTCAGCCAGAATT	NA	False	NA	27	True	AATAAA	-24	NA	32176502	32182024	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_32176697_32177751_32177950_32179848_32180054_32181573
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015824	chr11	+	559	3	FSM	ENSMUSG00000069919.8	ENSMUST00000093209.4	699	3	161	-21	-139	21	multi-exon	FALSE	canonical	1	2	junction_2	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCATGCCTGGTTCTCT	7158	False	NA	NA	False	AATAAA	-17	NA	32233671	32234486	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_32233802_32233923_32234129_32234262
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015852	chr11	-	1832	2	Genic_Genomic	ENSMUSG00000083303.2_ENSMUSG00000081076.4	novel	888	1	NA	NA	-79	96	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGCATAAAAATTTAGCTC	NA	False	NA	NA	False	AATAAA	-21	NA	32989782	32830265	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_32831010_32988694
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015880	chr11	-	1299	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	-4	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	6179.43119065177	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACTCTCATACTTTGAA	NA	False	NA	-12	True	AATAAA	-41	NA	33113081	33102489	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110912_33111101_33111226_33111547_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015883	chr11	-	1298	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	-3	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	6154.22693439233	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACTCTCATACTTTGAA	NA	False	NA	-12	True	AATAAA	-41	NA	33113080	33102489	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111216_33111543_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015932	chr11	-	1207	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6152.71604740541	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113076	33102509	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_33102813_33104018_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015940	chr11	-	1270	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	6154.22693439233	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113078	33102509	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111210_33111543_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015941	chr11	-	1265	10	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6479.01620523165	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113076	33102509	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_33102853_33105942_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015945	chr11	-	1109	10	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	6485.6089922227	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113080	33102509	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33111186_33111226_33111547_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015951	chr11	-	1198	10	FSM	ENSMUSG00000057113.14	ENSMUST00000093201.13	1192	10	-6	0	-1	0	multi-exon	FALSE	canonical	2	5	junction_3	6125.12875954356	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113078	33102509	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_33102853_33103985_33104061_33106002_33106105_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015973	chr11	-	1280	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	322	junction_7	6065.11492471495	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113078	33102509	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110435_33110823_33110922_33111105_33111226_33111547_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015974	chr11	-	1262	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	6157.24081143494	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113076	33102509	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110845_33110922_33111105_33111226_33111547_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015992	chr11	-	1279	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7893.32566729639	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113077	33102509	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_33102853_33103985_33104061_33105998_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110435_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000015994	chr11	-	1289	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	6177.79064795822	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113075	33102509	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109923_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016000	chr11	-	1246	10	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6479.01620523165	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113076	33102509	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_33102853_33105961_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016004	chr11	-	1279	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7881.18008676366	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113077	33102509	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109929_33109996_33110333_33110435_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016008	chr11	-	1308	12	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	7279.2028886558	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113076	33102509	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_33102853_33103985_33104061_33105192_33105221_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016014	chr11	-	1341	12	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	7794.88326875738	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113077	33102509	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_33102853_33103985_33104061_33104964_33105025_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016015	chr11	-	1280	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8082.14739781452	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113076	33102509	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109929_33109996_33110333_33110441_33110831_33110922_33111105_33111226_33111547_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016034	chr11	-	1271	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	6157.24081143494	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113077	33102509	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110435_33110831_33110922_33111105_33111226_33111547_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016057	chr11	-	961	7	NIC	ENSMUSG00000057113.14	novel	1192	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	7265.74271648964	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113076	33102509	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_33102853_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016183	chr11	-	299	1	Genic_Genomic	ENSMUSG00000057113.14	novel	NA	NA	NA	NA	-755	5	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTATGTGACAATATTT	NA	False	NA	-17	True	AATAAA	-20	NA	33105220	33104921	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_33104900_33105200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016184	chr11	-	1160	10	NNC	ENSMUSG00000057113.14	novel	1157	10	NA	NA	-1	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7581.32144903382	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTATGTGACAATATTT	NA	False	NA	-17	True	AATAAA	-20	NA	33113078	33104921	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_33105221_33106002_33106098_33106659_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016190	chr11	-	1152	10	NNC	ENSMUSG00000057113.14	novel	1157	10	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7773.54423352805	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTATGTGACAATATTT	NA	False	NA	-17	True	AATAAA	-20	NA	33113076	33104921	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_33105221_33106002_33106105_33106663_33106748_33106999_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016201	chr11	-	1151	10	NNC	ENSMUSG00000057113.14	novel	1157	10	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6479.01620523165	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTATGTGACAATATTT	NA	False	NA	-17	True	AATAAA	-20	NA	33113077	33104921	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_33105221_33106013_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016203	chr11	-	1166	10	NNC	ENSMUSG00000057113.14	novel	1157	10	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6479.01620523165	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTATGTGACAATATTT	NA	False	NA	-17	True	AATAAA	-20	NA	33113077	33104921	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_33105221_33105998_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016218	chr11	-	1146	10	NNC	ENSMUSG00000057113.14	novel	1157	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	7958.50576117259	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGATGTATGTGACAATA	NA	False	NA	-20	True	AATAAA	-17	NA	33113076	33104924	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_33105221_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111117_33111226_33111547_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016219	chr11	-	1149	10	NNC	ENSMUSG00000057113.14	novel	1157	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_5	7931.51691312638	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGATGTATGTGACAATA	NA	False	NA	-20	True	AATAAA	-17	NA	33113076	33104924	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_33105221_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110342_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016232	chr11	-	1166	10	NNC	ENSMUSG00000057113.14	novel	1157	10	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	7865.5704854593	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGATGTATGTGACAATA	NA	False	NA	-20	True	AATAAA	-17	NA	33113080	33104924	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_33105221_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110823_33110922_33111105_33111226_33111547_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016257	chr11	-	574	5	ISM	ENSMUSG00000057113.14	ENSMUST00000101375.5	966	10	-3	4991	-2	-4293	5prime_fragment	FALSE	canonical	3	16927	junction_2	1689.70870270588	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTTGTTTGTTTTTTG	NA	False	NA	NA	False	AAGAAA	-7	NA	33113079	33110318	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016261	chr11	+	596	1	FSM	ENSMUSG00000099902.2	ENSMUST00000119969.2	447	1	-36	-113	-36	113	mono-exon	FALSE	NA	NA	NA	NA	NA	396	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTCTCCTTTCCCTCA	NA	False	NA	NA	False	ATTAAA	-26	NA	33122882	33123478	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_33122900_33123500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016267	chr11	-	990	2	Intergenic	novelGene_45	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGCATCATTATTTAAT	NA	False	NA	NA	False	AATACA	-22	NA	33487247	33482576	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_-_33483454_33487134
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016300	chr11	-	2109	15	NNC	ENSMUSG00000018848.5	novel	2109	15	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	249.537490537341	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGGTGTGTTTCTTTGT	NA	False	NA	-1	True	AGTAAA	-17	NA	35725329	35699207	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717299_35717405_35718184_35718294_35719451_35719641_35723998_35724134_35725263
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016301	chr11	-	2112	15	NNC	ENSMUSG00000018848.5	novel	2109	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	250.841685172956	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGGTGTGTTTCTTTGT	NA	False	NA	-1	True	AGTAAA	-17	NA	35725332	35699207	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707459_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723998_35724134_35725263
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016308	chr11	-	212	1	NIC	ENSMUSG00000018848.5	novel	2109	15	NA	NA	11517	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGGTGTGTTTCTTTGT	NA	False	NA	-1	True	AGTAAA	-17	NA	35699419	35699207	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_35699200_35699400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016398	chr11	-	721	6	FSM	ENSMUSG00000020415.17	ENSMUST00000118368.8	696	6	4	-29	0	6	multi-exon	FALSE	canonical	3	206	junction_5	3753.79296179211	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGATTGGTATTTTTTG	NA	False	NA	-6	True	AATAAA	-40	NA	43317040	43311070	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316409_43316509_43317015
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016415	chr11	-	729	6	FSM	ENSMUSG00000020415.17	ENSMUST00000101340.11	700	6	-8	-21	3	2	multi-exon	FALSE	canonical	3	4089	junction_5	2240.31940579909	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACCCCTGATTGGTATTT	NA	False	NA	-10	True	AATAAA	-36	NA	43317037	43311074	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316409_43316509_43317000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016419	chr11	-	1395	4	FSM	ENSMUSG00000020415.17	ENSMUST00000117446.8	1674	4	295	-16	277	2	multi-exon	FALSE	canonical	3	9157	junction_2	511.130337802622	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACCCCTGATTGGTATTT	NA	False	NA	-10	True	AATAAA	-36	NA	43316513	43311074	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_43312093_43313719_43313814_43315545_43315725_43316409
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016424	chr11	-	688	5	NNC	ENSMUSG00000020415.17	novel	948	5	NA	NA	277	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4193.51525423481	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAATACTTAACCAACCC	NA	False	NA	-23	True	AATAAA	-23	NA	43316513	43311087	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_43311236_43311933_43312093_43313719_43313814_43315541_43315725_43316409
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016428	chr11	-	672	5	NNC	ENSMUSG00000020415.17	novel	948	5	NA	NA	277	3	at_least_one_novel_splicesite	FALSE	canonical	3	194	junction_4	4021.32586188933	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAATACTTAACCAACCC	NA	False	NA	-23	True	AATAAA	-23	NA	43316513	43311087	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315713_43316409
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016435	chr11	-	676	5	NNC	ENSMUSG00000020415.17	novel	948	5	NA	NA	277	0	at_least_one_novel_splicesite	FALSE	canonical	3	310	junction_4	3971.87690991299	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGTGAATACTTAACCAA	NA	False	NA	-26	True	AATAAA	-20	NA	43316513	43311090	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315720_43316409
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016462	chr11	+	2710	16	FSM	ENSMUSG00000020409.11	ENSMUST00000020681.10	3625	16	-31	946	-16	-946	multi-exon	FALSE	canonical	3	184	junction_1	28.1705914425349	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGGATTTTCGTACACTT	NA	False	NA	14	True	AATAAA	-25	NA	43324554	43337862	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_43324647_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016474	chr11	+	200	1	Intergenic	novelGene_46	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTCTGAGCCATCTCTT	3181	False	NA	NA	False	NA	NA	NA	43601859	43602059	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_+_43601900_43602100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016476	chr11	-	1983	8	FSM	ENSMUSG00000041278.11	ENSMUST00000048578.3	1438	8	-35	-510	-9	13	multi-exon	FALSE	canonical	3	649	junction_5	59.12318513416	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGTGTGATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	43638844	43620325	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_43621435_43627245_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43638748
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016483	chr11	-	324	1	ISM	ENSMUSG00000041278.11	ENSMUST00000109278.8	1965	8	17682	491	17656	6	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGACTATGTTGTTAATTT	9915	False	NA	-4	True	AATAAA	-18	NA	43621153	43620829	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_43620800_43621200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016500	chr11	-	1045	1	NIC	ENSMUSG00000041231.16	novel	2088	11	NA	NA	2625	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTATCTGTTTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	44346444	44345399	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_44345400_44346400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016510	chr11	+	1501	1	ISM	ENSMUSG00000006169.21	ENSMUST00000109261.11	3452	12	57161	0	26728	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGCCCGCCTCTTTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	45799951	45801452	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_45800000_45801500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016518	chr11	-	469	1	NIC	ENSMUSG00000011254.17	novel	2202	7	NA	NA	6087	-1019	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGGAGTCATTTTTAGC	NA	False	NA	0	True	TATAAA	-19	NA	45839157	45838688	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_45838700_45839200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016530	chr11	+	827	2	Antisense	novelGene_ENSMUSG00000069899.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTTTTTAAGATCTAT	NA	False	NA	NA	False	NA	NA	NA	45942179	45943176	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr11_+_45942886_45943055
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016543	chr11	+	1146	2	FSM	ENSMUSG00000020397.16	ENSMUST00000152119.2	381	2	-15	-750	-15	81	multi-exon	FALSE	canonical	3	22	junction_1	0	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTAGATTTATTCCAAAA	NA	False	NA	19	True	AATAAA	-32	NA	46327736	46332435	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_46327837_46331389
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016599	chr11	+	1762	8	NNC	ENSMUSG00000020372.16	novel	1447	8	NA	NA	-279	4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	2299.38196665352	19143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACCTTTCCCCAAGAACA	NA	False	NA	NA	False	AATAAA	-27	NA	48690879	48697265	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_48691400_48692489_48692666_48693099_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016642	chr11	+	1096	8	NNC	ENSMUSG00000020372.16	novel	1447	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2912.89236299032	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTCTATATGTGAGTC	NA	False	NA	23	True	AATAAA	-15	NA	48691186	48696915	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_48691400_48692489_48692666_48693099_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696380_48696483_48696806
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016645	chr11	+	1092	8	NNC	ENSMUSG00000020372.16	novel	1447	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2919.67345112848	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTCTATATGTGAGTC	NA	False	NA	23	True	AATAAA	-15	NA	48691186	48696915	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_48691400_48692489_48692666_48693099_48693235_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016660	chr11	-	802	1	ISM	ENSMUSG00000040365.15	ENSMUST00000047145.14	3432	6	10148	0	5190	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGGACTCTTTTA	NA	False	NA	-25	True	AATAAA	-18	NA	48698032	48697230	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_48697200_48698000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016664	chr11	+	621	1	ISM	ENSMUSG00000046311.14	ENSMUST00000109197.8	4029	5	14667	31	3616	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGTGACTTGTTTTAG	NA	False	NA	7	True	AATAAA	-16	NA	49108991	49109612	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_49109000_49109600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016724	chr11	-	1884	8	FSM	ENSMUSG00000015837.16	ENSMUST00000015981.12	2673	8	0	789	0	-3	multi-exon	TRUE	canonical	3	390	junction_1	128.516496201532	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCCTGTGATCCGTACG	NA	False	NA	-17	True	AATAAA	-19	NA	50101618	50090981	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_50091775_50093339_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016740	chr11	-	1871	1	NIC	ENSMUSG00000020368.16	novel	4281	15	NA	NA	1982	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	NA	False	NA	-54	True	AATAAA	-22	NA	50187164	50185293	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_50185300_50187200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016775	chr11	-	651	2	ISM	ENSMUSG00000045942.14	ENSMUST00000231433.2	855	4	1661	-146	1661	4	3prime_fragment	FALSE	canonical	2	4	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGCCTCATTTTTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	51145430	51144473	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_51144880_51145185
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016818	chr11	-	1202	6	NNC	ENSMUSG00000020358.18	novel	2370	7	NA	NA	476	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1277.16821131752	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCAAGCCTGGGTAAATG	NA	False	NA	-24	True	AATAAA	-15	NA	51497198	51491702	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_51492306_51493415_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016820	chr11	-	1203	6	NNC	ENSMUSG00000020358.18	novel	2370	7	NA	NA	476	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1258.24242497223	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCAAGCCTGGGTAAATG	NA	False	NA	-24	True	AATAAA	-15	NA	51497198	51491702	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_51492306_51493419_51493523_51495221_51495359_51495485_51495645_51496287_51496457_51497166
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016822	chr11	-	1343	7	NNC	ENSMUSG00000020358.18	novel	1437	8	NA	NA	476	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1187.02677120424	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCAAGCCTGGGTAAATG	NA	False	NA	-24	True	AATAAA	-15	NA	51497198	51491702	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_51492306_51492576_51492718_51493415_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016823	chr11	-	1338	7	NNC	ENSMUSG00000020358.18	novel	1437	8	NA	NA	476	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1187.02677120424	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCAAGCCTGGGTAAATG	NA	False	NA	-24	True	AATAAA	-15	NA	51497198	51491702	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_51492306_51492576_51492713_51493415_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016862	chr11	+	351	1	NIC	ENSMUSG00000001056.4	novel	1042	4	NA	NA	3320	12	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGGTGTTCTTGAAG	NA	False	NA	28	True	AGTAAA	-23	NA	51513917	51514268	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_51513900_51514300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016875	chr11	-	2375	5	FSM	ENSMUSG00000001053.16	ENSMUST00000001080.16	2367	5	-28	20	-28	-20	multi-exon	FALSE	canonical	3	337	junction_4	13.2382022948737	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGTCTTATGTGTTTG	NA	False	NA	-20	True	AATATA	-12	NA	51541697	51533909	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51541504
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016880	chr11	-	726	1	Genic_Genomic	ENSMUSG00000007777.10	novel	NA	NA	NA	NA	2558	16	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTCCTGCATACATGT	7742	False	NA	4	True	ATTAAA	-30	NA	51576922	51576196	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_51576200_51576900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016929	chr11	+	1306	4	NNC	ENSMUSG00000020392.9	novel	637	4	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	504.667107001129	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGGTTCAAGTTGTGTGA	NA	False	NA	NA	False	AATAAA	-22	NA	51858481	51868163	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_51858785_51860970_51861071_51866726_51867028_51867561
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016942	chr11	-	1726	7	FSM	ENSMUSG00000020390.13	ENSMUST00000109086.8	585	7	-29	-1112	-29	-58	multi-exon	FALSE	canonical	3	81	junction_6	225.904662782039	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTCTCTCTAGTAGT	NA	False	NA	0	True	AGTAAA	-16	NA	51891618	51876381	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119_51891189_51891503
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016969	chr11	+	1590	7	NNC	ENSMUSG00000020349.5	novel	7102	7	NA	NA	354	2926	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	769.78339305432	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGAATTGTATCAGTGG	NA	False	NA	31	True	AATAAA	-21	NA	51989861	52013445	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_51989978_52003946_52004157_52008813_52008990_52009495_52009586_52009969_52010132_52011759_52011879_52012728
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016984	chr11	+	1085	5	NIC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	-1	-184	combination_of_known_junctions	FALSE	canonical	3	64	junction_3	2227.98401026578	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTATGTCATCTTTTTA	438	False	NA	14	True	ATTAAA	-17	NA	52122862	52137501	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_52122946_52127663_52127761_52133413_52133488_52135807_52135949_52136811
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016994	chr11	+	1222	6	NNC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	0	-184	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2056.82761552834	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTATGTCATCTTTTTA	439	False	NA	14	True	ATTAAA	-17	NA	52122863	52137501	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135953_52136821
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000016997	chr11	+	662	5	NIC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	0	197	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	2287.14598353494	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCATTTTGGGCTTTCCC	439	False	NA	-22	True	AATAAA	-27	NA	52122863	52137076	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52136811
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017011	chr11	+	1232	6	NNC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	0	-184	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1988.4671885651	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTATGTCATCTTTTTA	439	False	NA	14	True	ATTAAA	-17	NA	52122863	52137501	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_52122950_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017140	chr11	+	137	1	Genic_Genomic	ENSMUSG00000018395.20	novel	NA	NA	NA	NA	7916	35	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACCAGTCTCATTTTTC	NA	False	NA	NA	False	NA	NA	NA	53492692	53492829	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_+_53492700_53492800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017144	chr11	-	769	1	ISM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	57032	0	29925	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGCATGGATGTGGGT	NA	False	NA	1	True	NA	NA	NA	53541114	53540345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_53540300_53541100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017188	chr11	+	1830	13	FSM	ENSMUSG00000037533.21	ENSMUST00000108895.8	1829	13	-1	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	14.7082743152735	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTATGCTCATTATTGT	NA	False	NA	NA	False	AATAAA	-15	NA	54413714	54525835	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017191	chr11	-	756	1	Genic_Genomic	ENSMUSG00000052298.13	novel	NA	NA	NA	NA	42134	6	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGATTTTTCTTCTAAT	10002	False	NA	-6	True	AATAAA	-19	NA	54609031	54608275	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_54608300_54609000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017219	chr11	+	636	3	NNC	ENSMUSG00000020267.7	novel	636	3	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2403	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTTGTTACTCTGGAA	NA	False	NA	34	True	AATAAA	-23	NA	54757205	54761327	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_54757427_54760673_54760783_54761021
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017220	chr11	+	637	3	NNC	ENSMUSG00000020267.7	novel	636	3	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2402.5	467	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTTGTTACTCTGGAA	NA	False	NA	34	True	AATAAA	-23	NA	54757205	54761327	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_54757427_54760673_54760777_54761014
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017240	chr11	+	313	1	ISM	ENSMUSG00000020267.7	ENSMUST00000020504.6	636	3	3806	0	3708	0	mono-exon	FALSE	NA	NA	NA	NA	NA	364	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTTGTTACTCTGGAA	NA	False	NA	34	True	AATAAA	-23	NA	54761014	54761327	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_54761000_54761300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017250	chr11	-	1434	7	ISM	ENSMUSG00000020400.18	ENSMUST00000108889.10	2834	18	35320	2	273	0	3prime_fragment	FALSE	canonical	3	102	junction_1	67.8126504094594	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	NA	False	NA	-5	True	CATAAA	-18	NA	54811628	54801612	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017268	chr11	+	861	1	ISM	ENSMUSG00000000594.8	ENSMUST00000000608.8	4127	4	11923	2131	11923	-2131	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGGCTCCTTTTCTTG	NA	False	NA	22	True	AATAAA	-15	NA	55000863	55001724	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_55000900_55001700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017274	chr11	+	126	1	ISM	ENSMUSG00000020261.16	ENSMUST00000108872.9	5264	11	31855	0	22410	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTGCAAACTGTGTCTT	3093	False	NA	24	True	AATAAA	-24	NA	55127030	55127156	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_55127000_55127200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017347	chr11	-	2581	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	-21	0	at_least_one_novel_splicesite	TRUE	canonical	3	272	junction_13	66.0623696698092	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCGTGGTATTTAATAGC	NA	False	NA	NA	False	AATAAA	-21	NA	57409464	57373818	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405118_57409398
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017365	chr11	+	735	2	Intergenic	novelGene_47	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	3727	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACGTCTAATGTAGCAG	NA	False	NA	NA	False	NA	NA	NA	57433741	57446378	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_+_57434037_57445938
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017385	chr11	-	768	4	FSM	ENSMUSG00000087165.8	ENSMUST00000152790.8	714	4	-50	-4	-50	4	multi-exon	FALSE	canonical	3	14	junction_3	7.84573486395988	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTCAGTGATTAGCA	NA	False	NA	1	True	NA	NA	NA	57692293	57686320	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_57686621_57686851_57687000_57687137_57687224_57692059
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017403	chr11	+	271	1	ISM	ENSMUSG00000037331.16	ENSMUST00000071487.13	6614	19	49733	2964	17184	-2964	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTTTGTCTGGATTACC	NA	False	NA	NA	False	TTTAAA	-6	NA	57949622	57949893	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_57949600_57949900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017404	chr11	+	827	1	ISM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	52144	0	19595	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57952033	57952860	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_57952000_57952900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017426	chr11	+	905	1	Genic_Genomic	ENSMUSG00000020515.14	novel	NA	NA	NA	NA	3665	2	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAAGTGTGGTCTTTGCT	NA	False	NA	16	True	AATAAA	-21	NA	58008517	58009422	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_+_58008500_58009400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017430	chr11	-	199	1	Intergenic	novelGene_48	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCCTAAAATGGAGGCAG	NA	False	NA	NA	False	NA	NA	NA	58061547	58061348	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_-_58061300_58061500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017468	chr11	+	1147	2	ISM	ENSMUSG00000037243.18	ENSMUST00000049353.9	1860	12	-95	6149	8	-6135	intron_retention	FALSE	canonical	3	82	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAATGTCTGGGCATGGAG	7681	False	NA	NA	False	AAAAAG	-7	NA	58197902	58199304	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_58198083_58198337
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017496	chr11	-	198	1	ISM	ENSMUSG00000049154.13	ENSMUST00000094156.12	567	4	8961	5	8961	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGACTATGTCACAGAT	NA	False	NA	NA	False	AATAAA	-22	NA	58683825	58683627	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_58683600_58683800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017521	chr11	+	189	1	ISM	ENSMUSG00000020455.17	ENSMUST00000108810.10	2301	7	13155	0	13154	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGCTTATCCTGTG	NA	False	NA	15	True	AATAAA	-15	NA	58882095	58882284	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_58882100_58882300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017525	chr11	-	186	1	ISM	ENSMUSG00000049287.6	ENSMUST00000054523.6	4021	3	6128	2057	5706	-2057	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCAGACCTCTTGTTTCA	NA	False	NA	0	True	AGTAAA	-20	NA	59048437	59048251	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_59048300_59048400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017527	chr11	-	1039	8	FSM	ENSMUSG00000020444.20	ENSMUST00000170202.9	1078	8	60	-21	60	21	multi-exon	FALSE	canonical	3	619	junction_7	90.3745042609262	1038	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGGCTTATGGCCTCTG	1530	False	NA	1	True	AATAAA	-34	NA	59082718	59074679	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_59075014_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082576
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017600	chr11	-	1187	1	Genic_Genomic	ENSMUSG00000048076.15	novel	NA	NA	NA	NA	15565	1	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGTGTGTCAGTGCC	NA	False	NA	-1	True	AATAAA	-18	NA	59103423	59102236	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_59102200_59103400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017675	chr11	+	281	2	FSM	ENSMUSG00000085551.2	ENSMUST00000130205.2	274	2	0	-7	0	7	multi-exon	FALSE	canonical	3	8	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTGACGAAAGCTTGGAA	2003	False	NA	NA	False	AATAAA	-23	NA	59812324	59812722	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_59812434_59812550
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017677	chr11	+	316	2	NNC	ENSMUSG00000085551.2	novel	274	2	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTGACGAAAGCTTGGAA	2003	False	NA	NA	False	AATAAA	-23	NA	59812324	59812722	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_59812469_59812550
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017715	chr11	+	1483	6	FSM	ENSMUSG00000018415.15	ENSMUST00000070681.7	4283	6	313	2487	313	-2487	multi-exon	FALSE	canonical	3	383	junction_3	37.1408131305711	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATTTTTATGGTACCT	NA	False	NA	NA	False	AATAAA	-20	NA	60308400	60333616	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_60308671_60315599_60315660_60323158_60323267_60327173_60327276_60329268_60329400_60332804
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017735	chr11	+	681	1	ISM	ENSMUSG00000042650.4	ENSMUST00000044250.4	5730	4	17250	2604	17250	1541	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGTCTGATGCTGTGGT	1743	False	NA	16	True	AATAAA	-25	NA	60446053	60446734	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_60446100_60446700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017786	chr11	-	1250	3	NNC	ENSMUSG00000043284.13	novel	1511	3	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTCTCTTTTCTGCC	7842	False	NA	-5	True	ATTAAA	-17	NA	60769605	60755277	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_60756169_60766581_60766874_60769538
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017796	chr11	+	180	1	Intergenic	novelGene_49	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCGAGAGTGCAGGATGTA	NA	False	NA	NA	False	NA	NA	NA	60771901	60772081	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_+_60771900_60772100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017813	chr11	-	543	1	Genic_Genomic	ENSMUSG00000042549.11	novel	NA	NA	NA	NA	-13	-10421	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTTGCCAGCCTTGAC	NA	False	NA	NA	False	ATTAAA	-26	NA	60822706	60822163	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_60822200_60822700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017821	chr11	+	471	1	ISM	ENSMUSG00000042529.15	ENSMUST00000089184.11	2291	2	48097	0	4857	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCTTGCTCTTCTGTTT	NA	False	NA	30	True	AATAAA	-42	NA	60961486	60961957	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_60961500_60962000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017844	chr11	-	367	1	Intergenic	novelGene_50	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCAGTTTCATCGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	61282320	61281953	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_-_61282000_61282300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017846	chr11	-	1621	2	Intergenic	novelGene_51	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCAGTTTCATCGCTTCTT	8085	False	NA	NA	False	NA	NA	NA	61288486	61281953	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_-_61283397_61288308
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017858	chr11	+	612	7	NNC	ENSMUSG00000001039.13	novel	817	7	NA	NA	-28	4022	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	127.20019217316	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTGGTCATGGTGCT	NA	False	NA	NA	False	NA	NA	NA	61396000	61407779	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_61396098_61397169_61397239_61398453_61398566_61399897_61399995_61400295_61400359_61403197_61403266_61407673
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017894	chr11	-	1202	1	ISM	ENSMUSG00000047804.16	ENSMUST00000102650.10	3874	15	57379	365	5577	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCAACTTCCTGCTTT	NA	False	NA	NA	False	NA	NA	NA	61763699	61762497	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_61762500_61763700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017925	chr11	+	1323	2	ISM	ENSMUSG00000042298.19	ENSMUST00000101075.11	2193	9	31615	-4	4055	4	3prime_fragment	FALSE	canonical	3	196	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATGGATTCTAATAATC	NA	False	NA	20	True	AATAAA	-16	NA	62203922	62206076	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_62204005_62204835
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017949	chr11	+	1212	3	Fusion	ENSMUSG00000014245.9_ENSMUSG00000019505.8	novel	1499	2	NA	NA	-41887	0	multi-exon	FALSE	canonical	0	0	junction_1	17708.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGTCACTTGTGAAAT	NA	False	NA	25	True	AATAAA	-24	NA	62400109	62444039	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr11_+_62400158_62442331_62442422_62442965
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017958	chr11	+	1445	3	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	53083	-513	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	147.5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTGGGCCCACACCTTT	NA	False	NA	25	True	AATAAA	-29	NA	62402516	62404730	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_62402827_62402963_62403098_62403729
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017966	chr11	-	345	1	Genic_Genomic	ENSMUSG00000018509.9	novel	NA	NA	NA	NA	2608	2	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTATGACATATTTCTTT	204	False	NA	-12	True	AATAAA	-21	NA	62416114	62415769	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_62415800_62416100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000017970	chr11	+	1171	3	NNC	ENSMUSG00000019505.8	novel	1499	2	NA	NA	-12005	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17708.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGTCACTTGTGAAAT	NA	False	NA	25	True	AATAAA	-24	NA	62429991	62444039	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_62429999_62442331_62442422_62442965
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018008	chr11	+	1169	2	NNC	ENSMUSG00000019505.8	novel	1499	2	NA	NA	-172	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGTCACTTGTGAAAT	NA	False	NA	25	True	AATAAA	-24	NA	62442329	62444039	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_62442437_62442977
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018034	chr11	+	447	4	NNC	ENSMUSG00000086841.2	novel	462	5	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1903.66214322698	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAGTGTTTTGGATGAA	NA	False	NA	NA	False	AATAAA	-20	NA	62493701	62495635	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_62493850_62494060_62494109_62494422_62494519_62495480
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018035	chr11	+	967	3	NIC	ENSMUSG00000086841.2	novel	462	5	NA	NA	-1	2	intron_retention	FALSE	canonical	3	3662	junction_1	536.5	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAGTGTTTTGGATGAA	NA	False	NA	NA	False	AATAAA	-20	NA	62493701	62495635	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_62493850_62494060_62494473_62495228
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018036	chr11	+	464	5	NNC	ENSMUSG00000086841.2	novel	462	5	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1876.6681912368	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAGTGTTTTGGATGAA	NA	False	NA	NA	False	AATAAA	-20	NA	62493701	62495635	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_62493850_62494060_62494109_62494422_62494473_62495228_62495305_62495493
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018037	chr11	+	1723	2	ISM	ENSMUSG00000086841.2	ENSMUST00000131787.2	462	5	-1	-2	-1	2	intron_retention	FALSE	canonical	3	3662	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAGTGTTTTGGATGAA	NA	False	NA	NA	False	AATAAA	-20	NA	62493701	62495635	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_62493850_62494060
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018038	chr11	+	459	4	NNC	ENSMUSG00000086841.2	novel	462	5	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2070.48416238006	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAGTGTTTTGGATGAA	NA	False	NA	NA	False	AATAAA	-20	NA	62493701	62495635	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_62493850_62494380_62494473_62495228_62495293_62495480
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018041	chr11	+	415	4	NIC	ENSMUSG00000086841.2	novel	462	5	NA	NA	-1	2	combination_of_known_splicesites	FALSE	canonical	3	410	junction_2	1602.82063874908	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAGTGTTTTGGATGAA	NA	False	NA	NA	False	AATAAA	-20	NA	62493701	62495635	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_62493850_62494060_62494109_62495228_62495293_62495480
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018043	chr11	+	603	3	NIC	ENSMUSG00000086841.2	novel	462	5	NA	NA	-1	2	intron_retention	FALSE	canonical	3	410	junction_2	1626	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAGTGTTTTGGATGAA	NA	False	NA	NA	False	AATAAA	-20	NA	62493701	62495635	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_62493850_62494060_62494109_62495228
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018055	chr11	+	460	4	NNC	ENSMUSG00000086841.2	novel	462	5	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1795.66038610374	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAGTGTTTTGGATGAA	NA	False	NA	NA	False	AATAAA	-20	NA	62493701	62495635	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_62493850_62494060_62494154_62495228_62495293_62495480
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018056	chr11	+	452	5	NNC	ENSMUSG00000086841.2	novel	462	5	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1876.6681912368	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAGTGTTTTGGATGAA	NA	False	NA	NA	False	AATAAA	-20	NA	62493701	62495635	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_62493850_62494060_62494109_62494422_62494473_62495228_62495293_62495493
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018074	chr11	+	676	4	NIC	ENSMUSG00000086841.2	novel	462	5	NA	NA	-1	2	intron_retention	FALSE	canonical	3	3941	junction_3	324.165938302524	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAGTGTTTTGGATGAA	NA	False	NA	NA	False	AATAAA	-20	NA	62493701	62495635	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_62494109_62494422_62494473_62495228_62495293_62495480
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018078	chr11	+	990	3	NIC	ENSMUSG00000086841.2	novel	462	5	NA	NA	-1	2	intron_retention	FALSE	canonical	3	3941	junction_2	397	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAGTGTTTTGGATGAA	NA	False	NA	NA	False	AATAAA	-20	NA	62493701	62495635	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_62494473_62495228_62495293_62495480
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018081	chr11	+	1934	1	FSM	ENSMUSG00000064437.4	ENSMUST00000082503.4	72	1	-203	-1659	-203	1659	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAGTGTTTTGGATGAA	NA	False	NA	NA	False	AATAAA	-20	NA	62493701	62495635	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_62493700_62495600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018083	chr11	+	414	4	NIC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	25	junction_1	2058.84519951247	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCAGTGTTTTGGATG	NA	False	NA	NA	False	AATAAA	-18	NA	62493702	62495633	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_62493850_62494422_62494473_62495228_62495293_62495480
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018085	chr11	+	448	5	NNC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1823.82763714119	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCAGTGTTTTGGATG	NA	False	NA	NA	False	AATAAA	-18	NA	62493702	62495633	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_62493850_62494060_62494109_62494436_62494473_62495228_62495293_62495480
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018090	chr11	+	448	5	NNC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1738.83560177493	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAGTGTTTTGGATGAA	NA	False	NA	NA	False	AATAAA	-20	NA	62493702	62495635	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_62493850_62494060_62494109_62494422_62494473_62495244_62495293_62495480
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018091	chr11	+	430	4	NNC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1903.66214322698	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAGTGTTTTGGATGAA	NA	False	NA	NA	False	AATAAA	-20	NA	62493702	62495635	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_62493850_62494060_62494109_62494422_62494473_62495450
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018099	chr11	+	425	5	NNC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1876.6681912368	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCAGTGTTTTGGATG	NA	False	NA	NA	False	AATAAA	-18	NA	62493702	62495633	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_62493850_62494060_62494109_62494422_62494473_62495228_62495293_62495517
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018117	chr11	+	449	4	NNC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2070.48416238006	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAGTGTTTTGGATGAA	NA	False	NA	NA	False	AATAAA	-20	NA	62493702	62495635	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_62493883_62494422_62494473_62495228_62495293_62495480
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018121	chr11	+	863	3	NIC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	2	intron_retention	FALSE	canonical	3	4331	junction_1	202	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAGTGTTTTGGATGAA	NA	False	NA	NA	False	AATAAA	-20	NA	62493702	62495635	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_62494109_62494422_62494473_62495228
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018125	chr11	+	1177	2	NIC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	2	intron_retention	FALSE	canonical	3	4735	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAGTGTTTTGGATGAA	NA	False	NA	NA	False	AATAAA	-20	NA	62493702	62495635	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_62494473_62495228
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018140	chr11	+	1814	2	FSM	ENSMUSG00000048497.12	ENSMUST00000062860.5	343	2	30	-1501	30	6	multi-exon	FALSE	canonical	3	15	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGGTTTGTTTA	NA	False	NA	8	True	NA	NA	NA	62539519	62557186	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_62539643_62555495
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018157	chr11	+	1691	1	Genic_Genomic	ENSMUSG00000048497.12	novel	NA	NA	NA	NA	15219	4	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTGTGTCTGGTTTGTT	817	False	NA	6	True	NA	NA	NA	62555493	62557184	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_+_62555500_62557200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018188	chr11	+	966	1	Genic_Genomic	ENSMUSG00000014177.11	novel	NA	NA	NA	NA	10559	1	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGTGTGGTCCCATTT	NA	False	NA	11	True	TATAAA	-19	NA	62785046	62786012	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_+_62785000_62786000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018230	chr11	+	1598	6	FSM	ENSMUSG00000050270.13	ENSMUST00000061786.6	1597	6	5	-6	5	6	multi-exon	FALSE	canonical	3	15	junction_4	4.45421149026402	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGGGGAGAATTACTAG	3923	False	NA	NA	False	NA	NA	NA	66915984	66926144	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_66916098_66916734_66916765_66920791_66920853_66921887_66922012_66923006_66923067_66924934
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018297	chr11	+	665	7	FSM	ENSMUSG00000020903.14	ENSMUST00000129992.8	552	7	-2	-111	-2	111	multi-exon	FALSE	canonical	3	28	junction_3	101.992919144201	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTGTACCTTGTTTGG	NA	False	NA	19	True	AATAAA	-19	NA	67857313	68094707	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_67857344_67860597_67860698_67864058_67864098_67902140_67902266_67911731_67911825_68000102_68000205_68094531
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018310	chr11	-	2383	9	FSM	ENSMUSG00000018736.15	ENSMUST00000018880.14	2382	9	0	-1	0	1	multi-exon	FALSE	canonical	3	185	junction_5	15.9530561335438	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCGAGATTGCTTTATTTG	NA	False	NA	NA	False	AATAAA	-25	NA	68743961	68712258	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_68713492_68720740_68720893_68724179_68724272_68726975_68727150_68730696_68730834_68732845_68732995_68734646_68734801_68736152_68736251_68743767
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018363	chr11	+	542	4	NNC	ENSMUSG00000060938.15	novel	526	4	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7369.46204881258	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTTGTGTGGTGTTTT	NA	False	NA	35	True	ATTAAA	-16	NA	68792414	68795362	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_68792451_68793095_68793269_68794004_68794146_68795170
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018432	chr11	-	753	6	NNC	ENSMUSG00000032892.15	novel	820	5	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_5	224.128891488804	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGCCTTCAAATCTA	7193	False	NA	-2	True	AATAAA	-22	NA	68864712	68863309	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_68863568_68863768_68863855_68863942_68864100_68864266_68864384_68864467_68864562_68864671
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018434	chr11	-	916	4	ISM	ENSMUSG00000032892.15	ENSMUST00000038644.5	820	5	-12	0	-12	0	intron_retention	FALSE	canonical	3	482	junction_2	45.3063645271464	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGCCTTCAAATCTA	7224	False	NA	-2	True	AATAAA	-22	NA	68864681	68863309	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_68863568_68863768_68863855_68863942_68864100_68864266
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018442	chr11	-	833	5	NNC	ENSMUSG00000032892.15	novel	820	5	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	244.726377818167	82	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGCCTTCAAATCTA	7219	False	NA	-2	True	AATAAA	-22	NA	68864686	68863309	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_68863568_68863768_68863851_68863942_68864100_68864266_68864384_68864467
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018505	chr11	+	484	1	NIC	ENSMUSG00000020895.15	novel	779	5	NA	NA	1245	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGCGTATACTATTTTT	6388	False	NA	NA	False	AATAAA	-19	NA	68963372	68963856	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_68963400_68963900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018515	chr11	+	244	1	ISM	ENSMUSG00000020894.17	ENSMUST00000021273.13	2205	5	3651	0	2535	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGTCCAAAATCTTTT	NA	False	NA	18	True	AATAAA	-18	NA	68982966	68983210	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_68983000_68983200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018518	chr11	+	771	1	ISM	ENSMUSG00000020893.18	ENSMUST00000021271.14	4671	23	10242	0	8668	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGACTTTGTGAAATGA	NA	False	NA	NA	False	AATACA	-26	NA	69000015	69000786	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_6.9e+07_69000800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018545	chr11	+	757	4	NNC	ENSMUSG00000049299.15	novel	759	4	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	215.47054451956	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTGAGTGTGAGTTC	NA	False	NA	16	True	AATAAA	-25	NA	69214894	69216619	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_69215083_69215220_69215292_69215649_69215793_69216264
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018571	chr11	-	877	1	Intergenic	novelGene_52	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTAGTGGGTCTGATGTG	NA	False	NA	-1	True	NA	NA	NA	69282632	69281755	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_-_69281800_69282600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018608	chr11	+	162	1	NIC	ENSMUSG00000059278.10	novel	671	3	NA	NA	401	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTCTGTGTGTAGGT	NA	False	NA	17	True	ATTAAA	-17	NA	69287344	69287506	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_69287300_69287500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018632	chr11	-	1082	5	ISM	ENSMUSG00000041346.12	ENSMUST00000155894.2	985	7	238	-4	238	4	intron_retention	FALSE	canonical	3	9	junction_4	73.4315157136226	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTGTGTCTGTTCGGGG	NA	False	NA	1	True	TATAAA	-20	NA	69454510	69452579	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454145
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018647	chr11	+	1785	11	FSM	ENSMUSG00000059552.14	ENSMUST00000005371.12	1772	11	-11	-2	-11	2	multi-exon	FALSE	canonical	3	1895	junction_3	134.752402575984	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTTGAGAGGTTGATAT	NA	False	NA	18	True	AATAAA	-19	NA	69471173	69482701	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018656	chr11	+	1716	10	NNC	ENSMUSG00000059552.14	novel	1772	11	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	672.180714971983	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471222	69482699	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_69471342_69477716_69477804_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018666	chr11	+	635	4	NNC	ENSMUSG00000059552.14	novel	1867	11	NA	NA	1	-1304	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1069.16301636166	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCATGAGCGCTGCTCC	NA	False	NA	NA	False	NA	NA	NA	69471228	69479343	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_69471342_69477716_69477800_69478173_69478459_69479189
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018685	chr11	+	914	4	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	556.054154037376	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523794	69544123	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_69523855_69542837_69542900_69543035_69543134_69543429
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018697	chr11	+	1177	2	FSM	ENSMUSG00000041287.6	ENSMUST00000047373.6	861	2	-313	-3	-313	3	multi-exon	FALSE	canonical	3	116	junction_1	0	253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCCATTTGTATTCT	NA	False	NA	27	True	ATTAAA	-20	NA	69545826	69547556	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_69546726_69547278
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018703	chr11	-	401	1	ISM	ENSMUSG00000018761.15	ENSMUST00000018905.12	1321	7	5545	0	1156	0	mono-exon	FALSE	NA	NA	NA	NA	NA	409	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTAGTGTGCATTCT	8068	False	NA	-4	True	AATAAA	-33	NA	69547923	69547522	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_69547500_69547900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018709	chr11	-	1262	7	NNC	ENSMUSG00000018761.15	novel	1321	7	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	238.147713264968	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTAGTGTGCATTCT	6813	False	NA	-4	True	AATAAA	-33	NA	69553416	69547522	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_69548155_69548245_69548357_69548550_69548670_69548768_69548848_69549391_69549525_69549636_69549703_69553294
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018746	chr11	-	1832	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	-47	0	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_10	4163.39696041586	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69562095	69557762	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69561997
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018747	chr11	-	1789	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_10	4160.14526669442	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563143	69557762	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561819_69563104
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018751	chr11	-	1777	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	4227.40747976819	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563143	69557762	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559899_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018755	chr11	-	1724	10	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	337	junction_9	4278.8197518867	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563143	69557762	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69563104
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018762	chr11	-	1769	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4165.61858071523	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563144	69557762	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_69558444_69558520_69558596_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018767	chr11	-	1774	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4240.16062903282	120	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563147	69557762	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559157_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018786	chr11	-	1428	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	-69	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	4230.56229005082	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCGTGAACATTTTAGAC	NA	False	NA	-8	True	AATAAA	-26	NA	69563143	69558116	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560949_69561099_69561440_69561574_69561753_69561803_69563104
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018809	chr11	-	2415	11	FSM	ENSMUSG00000005204.13	ENSMUST00000005336.9	2313	11	-97	-5	-97	5	multi-exon	FALSE	canonical	3	762	junction_10	82.7371742326265	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTCTTCCTTAAGGG	8433	False	NA	0	True	AATAAA	-22	NA	69572769	69563935	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018830	chr11	-	722	1	ISM	ENSMUSG00000041189.10	ENSMUST00000045971.9	2155	11	11182	4	9059	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCATTTTTGTCTATTT	9964	False	NA	-6	True	ATTAAA	-20	NA	69675587	69674865	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_69674900_69675600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018863	chr11	+	393	4	NNC	ENSMUSG00000070394.11	novel	492	4	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	123	junction_3	624.645143706053	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTCTTTATTCATC	NA	False	NA	NA	False	ATTAAA	-21	NA	69729368	69730444	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_69729400_69729745_69729778_69730013_69730095_69730195
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018871	chr11	+	979	2	FSM	ENSMUSG00000070394.11	ENSMUST00000139085.2	953	2	-20	-6	-12	0	multi-exon	FALSE	canonical	3	1529	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTCTTTATTCATC	NA	False	NA	NA	False	ATTAAA	-21	NA	69729368	69730444	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_69730095_69730191
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018873	chr11	+	474	4	NNC	ENSMUSG00000070394.11	novel	492	4	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	715.648423925231	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTCTTTATTCATC	NA	False	NA	NA	False	ATTAAA	-21	NA	69729369	69730444	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_69729486_69729753_69729778_69730013_69730095_69730191
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018878	chr11	+	465	4	NNC	ENSMUSG00000070394.11	novel	492	4	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	650.390822676814	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTCTTTATTCATC	NA	False	NA	NA	False	ATTAAA	-21	NA	69729370	69730444	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_69729476_69729745_69729778_69730013_69730089_69730191
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018885	chr11	+	1074	1	NIC	ENSMUSG00000070394.11	novel	492	4	NA	NA	-10	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTCTTTATTCATC	NA	False	NA	NA	False	ATTAAA	-21	NA	69729370	69730444	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_69729400_69730400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018913	chr11	-	1466	8	FSM	ENSMUSG00000018570.18	ENSMUST00000018714.13	1485	8	24	-5	-20	0	multi-exon	FALSE	canonical	2	12	junction_7	3.28260722659316	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGGGAGCTGCGTGTCC	9769	False	NA	-8	True	AATAAA	-20	NA	69791740	69788183	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_69788319_69788928_69788977_69789077_69789237_69789672_69789919_69790024_69790114_69790342_69790415_69790531_69790637_69791128
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018914	chr11	-	1582	8	NIC	ENSMUSG00000018570.18	novel	2009	8	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	5.03457433905888	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGGGAGCTGCGTGTCC	9769	False	NA	-8	True	AATAAA	-20	NA	69791740	69788183	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_69788319_69788928_69788977_69789077_69789237_69789672_69789919_69790024_69790114_69790342_69790415_69790531_69790753_69791128
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018929	chr11	+	1399	10	FSM	ENSMUSG00000023170.15	ENSMUST00000057884.6	1220	10	-176	-3	-34	3	multi-exon	FALSE	canonical	3	266	junction_9	31.9443961352292	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAGTGCTGTTTATTT	4057	False	NA	15	True	AATAAA	-25	NA	69804841	69807420	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018952	chr11	-	1338	6	NNC	ENSMUSG00000078812.11	novel	1343	6	NA	NA	-11	2	at_least_one_novel_splicesite	FALSE	canonical	3	1318	junction_5	7959.40273136119	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTGTTTATTTGTTGA	9930	False	NA	-7	True	AATAAA	-28	NA	69812223	69807537	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69812012
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018956	chr11	-	1349	6	NNC	ENSMUSG00000078812.11	novel	1343	6	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8467.07544315037	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTGTTTATTTGTTGA	9936	False	NA	-7	True	AATAAA	-28	NA	69812217	69807537	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_69808168_69808253_69808321_69808422_69808555_69808742_69808848_69809976_69810163_69811988
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000018970	chr11	-	634	1	Genic_Genomic	ENSMUSG00000078812.11	novel	NA	NA	NA	NA	959	2	mono-exon	FALSE	NA	NA	NA	NA	NA	1234	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTGTTTATTTGTTGA	9745	False	NA	-7	True	AATAAA	-28	NA	69808171	69807537	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_69807500_69808200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019026	chr11	-	1417	8	ISM	ENSMUSG00000018565.18	ENSMUST00000108594.8	1454	9	682	-1	126	-1	3prime_fragment	FALSE	canonical	3	471	junction_7	49.073455978081	1008	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGGTAATGCTTAAACAA	9582	False	NA	1	True	AATAAA	-31	NA	69871396	69859048	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870737_69870824_69870886_69871039
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019036	chr11	-	1056	6	NIC	ENSMUSG00000018565.18	novel	1454	9	NA	NA	23	0	intron_retention	FALSE	canonical	3	31	junction_3	218.340651276852	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGGTAATGCTTAAACA	9914	False	NA	0	True	AATAAA	-30	NA	69871064	69859049	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_69859367_69859921_69860023_69860318_69860415_69865865_69866087_69870655_69870737_69870824
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019075	chr11	+	944	4	FSM	ENSMUSG00000018567.15	ENSMUST00000018711.15	1351	4	412	-5	-84	5	multi-exon	FALSE	canonical	3	795	junction_2	75.6350888587213	3910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTCATTCCACCTCCT	5140	False	NA	21	True	AATAAA	-31	NA	69882380	69885782	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_69882629_69883190_69883270_69883407_69883527_69885284
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019099	chr11	+	496	1	NIC	ENSMUSG00000018567.15	novel	1351	4	NA	NA	2649	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCCTGTGTCATTCCAC	996	False	NA	16	True	AATAAA	-26	NA	69885281	69885777	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_69885300_69885800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019101	chr11	+	2015	5	FSM	ENSMUSG00000018572.11	ENSMUST00000018716.10	2006	5	-6	-3	-6	3	multi-exon	FALSE	canonical	3	427	junction_3	63.9193828192982	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTCCTATTTGGGGA	2311	False	NA	19	True	AATAAA	-29	NA	69886596	69890838	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889126_69889959_69890063
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019110	chr11	+	307	1	ISM	ENSMUSG00000020888.17	ENSMUST00000102575.9	5037	16	9196	2182	2833	8	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGGCTCCTTTCTTTG	5607	False	NA	20	True	AATAAA	-24	NA	69900638	69900945	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_69900600_69900900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019163	chr11	-	795	5	FSM	ENSMUSG00000020831.19	ENSMUST00000102569.10	778	5	-15	-2	-15	2	multi-exon	FALSE	canonical	3	142	junction_3	164.364495862093	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCTGCCAGCTGCCGTT	NA	False	NA	-10	True	ATTAAA	-17	NA	70128755	70126029	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_70126291_70126521_70126627_70126849_70127038_70128356_70128452_70128609
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019178	chr11	-	770	5	ISM	ENSMUSG00000020831.19	ENSMUST00000108578.9	880	6	268	0	32	0	3prime_fragment	FALSE	canonical	3	195	junction_1	104.365643293183	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	False	NA	-12	True	ATTAAA	-15	NA	70128472	70126031	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_70126291_70126521_70126627_70126849_70127038_70127702_70127805_70128356
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019186	chr11	-	567	3	ISM	ENSMUSG00000020831.19	ENSMUST00000108579.8	667	4	258	0	32	0	3prime_fragment	FALSE	canonical	3	142	junction_2	61	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	False	NA	-12	True	ATTAAA	-15	NA	70128472	70126031	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_70126295_70126849_70127038_70128356
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019242	chr11	+	758	4	NNC	ENSMUSG00000018919.11	novel	478	4	NA	NA	-18	5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	4.96655480858378	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCCAGTGATGAAAGATG	NA	False	NA	NA	False	AATAAA	-25	NA	70400777	70402009	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_70400873_70401040_70401178_70401394_70401579_70401667
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019268	chr11	+	807	6	NNC	ENSMUSG00000018286.7	novel	798	6	NA	NA	4	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2410.60402389111	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCTGTGTGAAGGTTCT	NA	False	NA	27	True	AATAAA	-17	NA	70416196	70418479	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_70416322_70416710_70416779_70417119_70417242_70417369_70417500_70418004_70418150_70418262
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019269	chr11	+	749	5	NIC	ENSMUSG00000018286.7	novel	798	6	NA	NA	4	4	combination_of_known_splicesites	FALSE	canonical	1	47	junction_1	2641.3254603513	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCTGTGTGAAGGTTCT	NA	False	NA	27	True	AATAAA	-17	NA	70416196	70418479	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_70416322_70417119_70417252_70417369_70417500_70418004_70418150_70418262
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019297	chr11	+	425	1	Genic_Genomic	ENSMUSG00000018286.7	novel	NA	NA	NA	NA	364	2	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTCTGCCTGCATGT	NA	False	NA	19	True	AATAAA	-20	NA	70418261	70418686	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_+_70418300_70418700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019342	chr11	+	866	5	NNC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	-209	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	229.49659583532	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGATCATCTTTACACA	25	False	NA	31	True	AATAAA	-32	NA	70540552	70542248	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_70540592_70540692_70540844_70540951_70541046_70541589_70541671_70541747
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019346	chr11	+	966	4	ISM	ENSMUSG00000040746.16	ENSMUST00000151034.9	937	7	1652	-330	-209	0	3prime_fragment	FALSE	canonical	3	525	junction_3	9.39266853573691	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	25	False	NA	30	True	AATAAA	-31	NA	70540552	70542247	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_70540844_70540951_70541046_70541589_70541671_70541747
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019348	chr11	+	1043	3	ISM	ENSMUSG00000040746.16	ENSMUST00000151034.9	937	7	1652	-330	-209	0	intron_retention	FALSE	canonical	3	537	junction_2	5.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	25	False	NA	30	True	AATAAA	-31	NA	70540552	70542247	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_70540844_70540951_70541046_70541589
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019366	chr11	-	511	1	Genic_Genomic	ENSMUSG00000018293.5	novel	NA	NA	NA	NA	2244	6	mono-exon	FALSE	NA	NA	NA	NA	NA	387	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTGGTTTGCACTTG	NA	False	NA	NA	False	AATAAA	-22	NA	70543180	70542669	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_70542700_70543200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019385	chr11	-	658	2	FSM	ENSMUSG00000018293.5	ENSMUST00000108549.2	608	2	-37	-13	9	3	multi-exon	FALSE	canonical	3	9692	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTTCTTGCTTTGAGCT	NA	False	NA	NA	False	ACTAAA	-19	NA	70545461	70543434	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_70543806_70545174
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019424	chr11	+	327	1	ISM	ENSMUSG00000020821.18	ENSMUST00000102554.8	6684	23	28623	2467	28521	-890	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCGTCATCCCACGTCATT	4102	False	NA	23	True	AGTAAA	-16	NA	70619996	70620323	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_70620000_70620300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019430	chr11	-	957	2	Genic_Genomic	ENSMUSG00000084139.2_ENSMUSG00000082983.2	novel	389	1	NA	NA	-100	49	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCATACACACACACACAC	NA	False	NA	NA	False	AATAAA	-12	NA	70800571	70652883	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_70653237_70799967
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019431	chr11	-	962	2	Genic_Genomic	ENSMUSG00000082983.2	novel	273	1	NA	NA	-117555	49	multi-exon	FALSE	canonical	0	0	junction_1	0	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCATACACACACACACAC	NA	False	NA	NA	False	AATAAA	-12	NA	70770760	70652883	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_70653237_70770151
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019441	chr11	-	933	2	Genic_Genomic	ENSMUSG00000082983.2	novel	273	1	NA	NA	-117555	49	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCATACACACACACACAC	NA	False	NA	NA	False	AATAAA	-12	NA	70770760	70652883	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_70653306_70770249
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019443	chr11	-	939	2	Genic_Genomic	ENSMUSG00000082983.2	novel	273	1	NA	NA	-117555	49	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCATACACACACACACAC	NA	False	NA	NA	False	AATAAA	-12	NA	70770760	70652883	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_70653312_70770249
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019457	chr11	-	2453	17	FSM	ENSMUSG00000040667.12	ENSMUST00000108531.8	2453	17	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_6	132.716744893024	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGCTTTACAATTAAAGT	NA	False	NA	1	True	AATAAA	-31	NA	70860799	70833897	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019458	chr11	-	2438	17	FSM	ENSMUSG00000040667.12	ENSMUST00000108530.2	2389	17	-19	-30	0	0	multi-exon	FALSE	canonical	3	409	junction_6	121.230008016786	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGCTTTACAATTAAAGT	NA	False	NA	1	True	AATAAA	-31	NA	70860799	70833897	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019473	chr11	+	716	7	FSM	ENSMUSG00000018449.13	ENSMUST00000178822.8	566	7	-32	-118	-5	0	multi-exon	FALSE	canonical	3	5	junction_5	117.134419459962	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTGTTCTGATGTGGG	NA	False	NA	17	True	ATTAAA	-18	NA	70861300	70868631	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70865819_70865867_70868483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019474	chr11	+	697	6	FSM	ENSMUSG00000018449.13	ENSMUST00000167509.2	519	6	-32	-146	-5	0	multi-exon	FALSE	canonical	3	23	junction_5	118.829962551538	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAACTTTCCTGGAGATT	NA	False	NA	45	True	NA	NA	NA	70861300	70868659	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70868483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019482	chr11	+	551	5	NIC	ENSMUSG00000018449.13	novel	548	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	157.733953225043	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGTGTTCTGATGTGG	NA	False	NA	16	True	ATTAAA	-17	NA	70861305	70868630	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_70861414_70862589_70862761_70863840_70863902_70864894_70864959_70868483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019543	chr11	+	1539	6	NNC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	-17	5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	92.1316449435263	376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAGATATCTATCTG	NA	False	NA	19	True	AATAAA	-23	NA	71933263	71938201	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_71933361_71933842_71934164_71935806_71936089_71936504_71936601_71937165_71937220_71937512
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019609	chr11	-	139	1	Intergenic	novelGene_53	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTGTCTGTTCATGAT	NA	False	NA	NA	False	NA	NA	NA	72182929	72182790	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_-_72182800_72182900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019610	chr11	+	544	1	Genic_Genomic	ENSMUSG00000040483.16	novel	NA	NA	NA	NA	11528	3	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTCTTTCACGTCG	NA	False	NA	11	True	NA	NA	NA	72204018	72204562	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_+_72204000_72204600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019663	chr11	+	268	3	ISM	ENSMUSG00000020788.16	ENSMUST00000163326.8	4606	22	11239	19997	-9689	2286	internal_fragment	FALSE	canonical	3	72	junction_2	14.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAACCAGGACAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	72863233	72863872	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_72863368_72863647_72863729_72863819
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019674	chr11	+	189	1	Intergenic	novelGene_54	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCCAGTGTTAGTGCTC	7433	False	NA	NA	False	AAGAAA	-2	NA	73017243	73017432	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_+_73017200_73017400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019695	chr11	-	1506	1	NIC	ENSMUSG00000047260.5	novel	1332	2	NA	NA	13	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGCGCATGGAATTTG	NA	False	NA	-27	True	AATAAA	-25	NA	73067850	73066344	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_73066300_73067800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019724	chr11	+	1031	1	ISM	ENSMUSG00000020741.18	ENSMUST00000092915.12	5379	26	20302	0	5335	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74560642	74561673	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_74560600_74561700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019727	chr11	-	454	1	Genic_Genomic	ENSMUSG00000020745.16	novel	NA	NA	NA	NA	48771	2	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTGGGGTTTTTTTCAA	7516	False	NA	NA	False	ATTAAA	-17	NA	74565226	74564772	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_74564800_74565200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019737	chr11	+	237	2	Antisense	novelGene_ENSMUSG00000020745.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTCACCAATTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	74591444	74609105	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr11_+_74591461_74608884
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019738	chr11	+	262	2	Antisense	novelGene_ENSMUSG00000020745.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCATGTGGGTGCTGGGA	NA	False	NA	NA	False	NA	NA	NA	74591444	74600913	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr11_+_74591461_74600667
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019792	chr11	-	243	1	ISM	ENSMUSG00000038268.5	ENSMUST00000071562.3	2670	2	897	1754	849	105	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTGCTGCCCC	2534	False	NA	0	True	AATAAA	-21	NA	75068764	75068521	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_75068500_75068800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019794	chr11	-	2043	13	FSM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	43	53	43	0	multi-exon	FALSE	canonical	3	189	junction_12	23.7876893931854	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTGCTGCCCC	NA	False	NA	0	True	AATAAA	-21	NA	75081302	75068521	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081224
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019804	chr11	+	498	1	ISM	ENSMUSG00000045287.7	ENSMUST00000102514.4	3525	2	73489	0	73489	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTTTTTTATTTCCTAA	NA	False	NA	8	True	AATAAA	-19	NA	75158097	75158595	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_75158100_75158600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019809	chr11	-	564	1	ISM	ENSMUSG00000000751.14	ENSMUST00000092907.12	5077	17	47413	2182	41277	2	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTTTGACTGTAAAGGA	3577	False	NA	-14	True	AATAAA	-23	NA	75191737	75191173	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_75191200_75191700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019837	chr11	+	1900	4	ISM	ENSMUSG00000038217.14	ENSMUST00000108435.2	1112	5	-15	8	-15	-8	intron_retention	FALSE	canonical	3	27	junction_1	3.09120616516523	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCAGTCTCTTGTGAA	NA	False	NA	24	True	AATAAA	-16	NA	75358889	75361717	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_75359204_75359382_75359466_75359667_75359751_75360297
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019853	chr11	-	363	2	Genic_Genomic	ENSMUSG00000081485.6	novel	192	1	NA	NA	-94	130	multi-exon	FALSE	canonical	2	8	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTTTACTAATGTTAAAA	NA	False	NA	NA	False	AATAAA	-27	NA	75490874	75490458	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_75490563_75490615
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019869	chr11	+	2799	2	ISM	ENSMUSG00000017776.16	ENSMUST00000108425.8	4290	3	13185	838	12927	5	3prime_fragment	FALSE	canonical	3	229	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCTTGGTGATCTTT	6162	False	NA	15	True	NA	NA	NA	75583294	75596896	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_75583389_75594191
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019901	chr11	+	1225	1	NIC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	13015	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTGTAACTATGGATCAT	3223	False	NA	24	True	ATTAAA	-20	NA	75655444	75656669	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_75655400_75656700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019923	chr11	-	2249	1	ISM	ENSMUSG00000017286.16	ENSMUST00000169701.8	4203	9	30844	0	26753	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGCCTTTCTCAGAAG	NA	False	NA	-1	True	AATAAA	-22	NA	76103645	76101396	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_76101400_76103600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019935	chr11	-	2556	9	FSM	ENSMUSG00000017286.16	ENSMUST00000017430.12	1434	9	-3	-1119	-3	1119	multi-exon	FALSE	canonical	3	653	junction_6	49.1602926659311	1404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGAATAGGTAAACTGCT	NA	False	NA	2	True	NA	NA	NA	76134554	76111216	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019946	chr11	-	1169	9	NNC	ENSMUSG00000017286.16	novel	1434	9	NA	NA	-24	52	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	248.496478848293	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCCAGACTGAGACAACT	NA	False	NA	-20	True	ATTAAA	-17	NA	76134525	76112567	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_76112858_76123847_76123935_76124027_76124135_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019958	chr11	+	819	3	ISM	ENSMUSG00000038046.5	ENSMUST00000040577.5	1510	4	26	3045	5	2690	5prime_fragment	FALSE	canonical	3	128	junction_1	8	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGTACATGTGTATGT	576	False	NA	NA	False	NA	NA	NA	76134566	76138400	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_76134913_76135104_76135350_76138172
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000019973	chr11	+	353	1	Genic_Genomic	ENSMUSG00000038046.5	novel	NA	NA	NA	NA	1061	6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGCAGGTGTGTA	7108	False	NA	29	True	ATTAAA	-37	NA	76141098	76141451	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_+_76141100_76141500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020002	chr11	-	1619	1	ISM	ENSMUSG00000017631.20	ENSMUST00000094012.11	5236	22	91067	0	18868	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCATGGTGTGGTTGTTT	NA	False	NA	-1	True	AATAAA	-36	NA	76309178	76307559	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_76307600_76309200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020007	chr11	+	405	1	FSM	ENSMUSG00000024205.8	ENSMUST00000136893.3	311	1	-40	-54	-40	54	mono-exon	FALSE	NA	NA	NA	NA	NA	459	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTCACCTGTAGCCCAG	NA	False	NA	NA	False	AATAAA	-39	NA	76492104	76492509	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_76492100_76492500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020016	chr11	-	2491	9	FSM	ENSMUSG00000010392.9	ENSMUST00000010536.9	4289	9	-9	1807	-9	-1807	multi-exon	FALSE	canonical	3	228	junction_2	27.7778576387741	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTCTTTTCTACTGGTT	NA	False	NA	NA	False	AATAAA	-21	NA	76654414	76619234	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_76621060_76625394_76625478_76628207_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76652060_76652182_76654345
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020024	chr11	-	798	7	ISM	ENSMUSG00000010392.9	ENSMUST00000010536.9	4289	9	12	10544	0	-10544	5prime_fragment	FALSE	canonical	3	229	junction_5	30.259984578097	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGAATTTGCCTATGAT	NA	False	NA	NA	False	AAAAAG	-4	NA	76654393	76627971	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76652060_76652182_76654345
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020084	chr11	+	3207	4	FSM	ENSMUSG00000037857.17	ENSMUST00000100802.11	5158	4	-16	1967	-16	-1967	multi-exon	FALSE	canonical	3	165	junction_1	19.0146142626022	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGAAAACTGTCTTGTT	NA	False	NA	NA	False	AAAAAG	-11	NA	77576964	77601600	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_77577334_77582367_77584081_77596334_77596368_77600508
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020092	chr11	-	278	1	Genic_Genomic	ENSMUSG00000017453.5	novel	NA	NA	NA	NA	1795	1	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCGGTGGTCTTTATTTT	NA	False	NA	-1	True	AATAAA	-23	NA	77771717	77771439	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_77771400_77771700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020123	chr11	-	2014	10	FSM	ENSMUSG00000020832.15	ENSMUST00000021183.4	2014	10	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_8	16.2890556304942	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATCTTTTATTTCTTT	NA	False	NA	-2	True	AATAAA	-22	NA	77971209	77964201	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_77965001_77965105_77965187_77965303_77965454_77966216_77966466_77966547_77966661_77966815_77966878_77967058_77967106_77968642_77968721_77969087_77969216_77970902
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020129	chr11	-	186	1	Intergenic	novelGene_55	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTAGGGGGTCTAGGTCC	NA	False	NA	NA	False	NA	NA	NA	77977887	77977701	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_-_77977700_77977900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020133	chr11	-	490	1	ISM	ENSMUSG00000017386.11	ENSMUST00000149437.8	3223	6	5700	901	5627	0	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCCTGTCTCCTCCCA	NA	False	NA	1	True	NA	NA	NA	78050715	78050225	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_78050200_78050700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020161	chr11	-	1068	4	FSM	ENSMUSG00000058546.9	ENSMUST00000127270.2	588	4	-480	0	27	0	multi-exon	FALSE	canonical	3	10927	junction_1	3582.37128170713	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTGTCATTTGTCGC	5990	False	NA	-11	True	CATAAA	-4	NA	78074383	78071757	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_78071824_78071979_78072050_78072242_78072420_78073628
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020183	chr11	-	1887	3	NIC	ENSMUSG00000058546.9	novel	560	5	NA	NA	38	0	intron_retention	FALSE	canonical	3	11765	junction_2	3544	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTGCTTGTCATTTGT	6001	False	NA	-14	True	CATAAA	-1	NA	78074372	78071760	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_78072050_78072242_78073813_78074344
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020195	chr11	+	1161	10	FSM	ENSMUSG00000002059.19	ENSMUST00000150941.8	795	10	-12	-354	-2	-1	multi-exon	FALSE	canonical	2	3	junction_1	46.6883547486501	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTCTTTAAAGATTT	6023	False	NA	25	True	ATTAAA	-19	NA	78079253	78083018	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_78079338_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020203	chr11	+	420	1	ISM	ENSMUSG00000002059.19	ENSMUST00000156435.2	950	8	1644	0	1421	0	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTCTTTAAAGATTTA	9369	False	NA	26	True	ATTAAA	-20	NA	78082599	78083019	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_78082600_78083000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020298	chr11	-	2442	4	FSM	ENSMUSG00000050132.14	ENSMUST00000153534.2	2497	4	-23	78	-23	0	multi-exon	FALSE	canonical	3	65	junction_3	7.78888096369861	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGTCTGTCTTCAGTC	4390	False	NA	-2	True	AATACA	-20	NA	78374647	78364116	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_78365859_78366032_78366155_78373982_78374173_78374259
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020304	chr11	-	730	1	ISM	ENSMUSG00000051232.14	ENSMUST00000052566.8	1347	6	4388	0	1034	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATCTTTGGTCTTAAA	6019	False	NA	-29	True	AATAAA	-21	NA	78398610	78397880	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_78397900_78398600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020348	chr11	+	912	5	FSM	ENSMUSG00000001105.16	ENSMUST00000108275.2	582	5	-82	-248	0	0	multi-exon	FALSE	canonical	3	256	junction_1	91.1125677390337	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGTGTGCATTATTT	NA	False	NA	24	True	AATAAA	-33	NA	78427186	78432563	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_78427403_78429659_78429789_78430785_78430872_78431720_78431825_78432186
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020356	chr11	+	1183	4	FSM	ENSMUSG00000001105.16	ENSMUST00000152016.2	909	4	-37	-237	-7	-16	multi-exon	FALSE	canonical	3	256	junction_1	104.521130240094	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCTTTCTTCTATGGT	NA	False	NA	8	True	AATAAA	-17	NA	78427261	78432547	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_78427403_78429659_78429789_78430785_78430872_78431720
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020373	chr11	-	1334	3	NNC	ENSMUSG00000037278.10	novel	1375	3	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	516.5	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTGTTGTGTGGAT	NA	False	NA	-7	True	AATAAA	-23	NA	78441562	78432642	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_78433619_78434307_78434457_78441353
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020384	chr11	-	1231	1	FSM	ENSMUSG00000049489.6	ENSMUST00000059468.6	1224	1	-2	-5	-2	5	mono-exon	FALSE	NA	NA	NA	NA	NA	1047	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCCTTATGGTATTTCT	6593	False	NA	3	True	AATAAA	-42	NA	78642557	78641326	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_78641300_78642600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020431	chr11	+	173	1	Intergenic	novelGene_56	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACGGGGGAAAAAGGTAA	3122	False	NA	NA	False	NA	NA	NA	79415801	79415974	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_+_79415800_79416000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020468	chr11	-	623	2	Intergenic	novelGene_57	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	104	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTTGCCCTTTGGGGGG	NA	False	NA	NA	False	ATTAAA	-19	NA	79867142	79865566	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_-_79865963_79866915
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020476	chr11	+	1132	1	ISM	ENSMUSG00000017548.16	ENSMUST00000017692.15	4373	16	39886	0	7797	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTCTGCATTGTTAT	NA	False	NA	37	True	TATAAA	-22	NA	79923817	79924949	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_79923800_79924900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020490	chr11	+	1854	3	ISM	ENSMUSG00000017550.15	ENSMUST00000151815.8	4572	19	31214	16	30095	-13	3prime_fragment	FALSE	canonical	3	127	junction_2	17	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGTGTGTTAAATTAT	NA	False	NA	12	True	ATTAAA	-7	NA	80023923	80026604	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_80024133_80024854_80025014_80025118
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020576	chr11	+	236	1	Genic_Genomic	ENSMUSG00000017421.19	novel	NA	NA	NA	NA	16508	141	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGTGTATGTGATACTT	NA	False	NA	NA	False	AATAAA	-16	NA	80296464	80296700	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_+_80296500_80296700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020591	chr11	+	1461	14	NIC	ENSMUSG00000017428.17	novel	2848	14	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_13	281.900796684929	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTCCTTTCTTGAGTGCT	NA	False	NA	16	True	AATAAA	-20	NA	80319454	80364074	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80363918
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020599	chr11	+	393	2	NNC	ENSMUSG00000017428.17	novel	796	8	NA	NA	8848	57	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAAGCTGTGCTCTCTGC	NA	False	NA	13	True	NA	NA	NA	80362288	80362792	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_80362425_80362535
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020604	chr11	+	497	1	ISM	ENSMUSG00000017428.17	ENSMUST00000017572.14	2848	14	44127	0	10137	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTCCTTTCTTGAGTGCT	NA	False	NA	16	True	AATAAA	-20	NA	80363577	80364074	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_80363600_80364100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020649	chr11	-	785	1	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	264	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCAGCTTCTTGTTCTA	NA	False	NA	-6	True	AATAAA	-22	NA	82792378	82791593	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_82791600_82792400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020658	chr11	-	1331	2	Genic_Genomic	ENSMUSG00000082419.4	novel	498	1	NA	NA	-8950	73	multi-exon	FALSE	canonical	0	0	junction_1	0	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGGGCTGAAGGGATGG	NA	False	NA	NA	False	NA	NA	NA	82927773	82918252	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_82918856_82927045
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020660	chr11	-	1333	2	Genic_Genomic	ENSMUSG00000082419.4	novel	498	1	NA	NA	-8950	70	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTAGGGGCTGAAGGGA	NA	False	NA	NA	False	AATAAA	-44	NA	82927773	82918255	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_82918856_82927040
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020690	chr11	+	660	1	Genic_Genomic	ENSMUSG00000035152.15	novel	NA	NA	NA	NA	-8	-16840	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGTTTCAGCTTAAAAG	4448	False	NA	NA	False	ATTAAA	-19	NA	83189841	83190501	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_+_83189800_83190500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020725	chr11	-	1089	4	NNC	ENSMUSG00000019122.9	novel	3006	4	NA	NA	-3706	660	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_3	12.9614813968157	139	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTCTGCCTCTTTTGC	NA	False	NA	1	True	AATAAA	-20	NA	83473168	83465483	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_83466322_83466668_83466778_83467200_83467273_83473098
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020726	chr11	-	1218	5	NNC	ENSMUSG00000019122.9	novel	3006	4	NA	NA	-3699	660	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_4	25.1445819213603	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTCTGCCTCTTTTGC	NA	False	NA	1	True	AATAAA	-20	NA	83473161	83465483	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_83466322_83466668_83466778_83467200_83467273_83469214_83469351_83473098
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020730	chr11	-	693	2	Antisense	novelGene_ENSMUSG00000000976.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	4569	False	NA	NA	False	NA	NA	NA	83644788	83643916	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr11_-_83644015_83644193
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020731	chr11	-	416	3	Antisense	novelGene_ENSMUSG00000000976.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2.5	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	4546	False	NA	NA	False	NA	NA	NA	83644811	83643916	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr11_-_83644015_83644193_83644240_83644539
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020740	chr11	+	950	7	ISM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	16	18731	-2	-258	5prime_fragment	TRUE	canonical	3	50	junction_5	6.46572158042361	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTCTGTCCACTGAG	4033	False	NA	NA	False	NA	NA	NA	83644537	83655849	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020766	chr11	-	1109	1	Genic_Genomic	ENSMUSG00000018651.15	novel	NA	NA	NA	NA	3183	255	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGCCGCTTTCTGTGAG	NA	False	NA	-20	True	AATAAA	-19	NA	83970599	83969490	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_83969500_83970600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020785	chr11	-	1017	1	ISM	ENSMUSG00000018405.8	ENSMUST00000018549.8	2477	5	5438	0	1313	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCTGGAGTTGATTTGT	NA	False	NA	-4	True	AATAAA	-23	NA	84704903	84703886	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_84703900_84704900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020786	chr11	-	2491	5	FSM	ENSMUSG00000018405.8	ENSMUST00000018549.8	2477	5	-14	0	-14	0	multi-exon	FALSE	canonical	0	0	junction_4	44.51404272811	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCTGGAGTTGATTTGT	NA	False	NA	-4	True	AATAAA	-23	NA	84710355	84703886	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_84705338_84705514_84705635_84705733_84705867_84709425_84709520_84709662
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020838	chr11	-	358	1	Genic_Genomic	ENSMUSG00000045140.9	novel	NA	NA	NA	NA	3526	3	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTCTGCATGTATTT	NA	False	NA	9	True	TTTAAA	-18	NA	84767495	84767137	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_84767100_84767500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020844	chr11	-	1030	5	FSM	ENSMUSG00000020526.13	ENSMUST00000103195.5	998	5	-29	-3	-29	3	multi-exon	FALSE	canonical	3	360	junction_2	22.0609949911603	816	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTCCCTTAGTAAACTAT	NA	False	NA	72	True	AATAAA	-19	NA	84807221	84801772	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_84802475_84804047_84804129_84805036_84805112_84806924_84806957_84807081
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020868	chr11	-	1377	1	ISM	ENSMUSG00000018481.10	ENSMUST00000018625.10	6463	13	44284	2208	44284	-2208	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCACATGGATTATTTG	1809	False	NA	-12	True	AATAAA	-16	NA	85081672	85080295	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_85080300_85081700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020872	chr11	+	621	4	FSM	ENSMUSG00000085628.5	ENSMUST00000136454.2	635	4	14	0	14	0	multi-exon	FALSE	canonical	1	1	junction_2	0.942809041582063	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGGCCTGAGCAGGACAA	NA	False	NA	NA	False	ATTAAA	-16	NA	85126010	85129130	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_85126159_85127965_85128074_85128236_85128341_85128869
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020890	chr11	+	1148	1	ISM	ENSMUSG00000085208.4	ENSMUST00000128960.2	4423	2	7030	1645	7017	-1645	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCGTCTCTGTTTCTGTG	NA	False	NA	9	True	NA	NA	NA	86099225	86100373	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_86099200_86100400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020897	chr11	+	1970	9	NNC	ENSMUSG00000020521.8	novel	4452	9	NA	NA	2	-2477	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	100.524794826948	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGGACCTGTTATGTA	NA	False	NA	7	True	AATAAA	-18	NA	86375484	86387374	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_86375626_86376889_86377332_86377481_86377559_86379892_86379994_86381183_86381338_86382504_86382664_86383986_86384053_86386053_86386156_86386646
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020909	chr11	-	818	1	ISM	ENSMUSG00000020516.16	ENSMUST00000154617.8	5531	15	41960	3157	8800	5	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGCTTGTCTGAGGGC	NA	False	NA	1	True	AATAAA	-26	NA	86393671	86392853	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_86392900_86393700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020927	chr11	-	1307	7	NNC	ENSMUSG00000018171.10	novel	2787	12	NA	NA	-19012	237	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_6	352.567093693605	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCCGTTTTCTTTAGT	NA	False	NA	0	True	TATAAA	-23	NA	86512133	86475518	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_86476278_86477321_86477425_86492833_86492896_86498001_86498119_86502167_86502249_86511730_86511856_86512073
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020940	chr11	-	762	1	NIC	ENSMUSG00000018171.10	novel	2787	12	NA	NA	1427	237	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCCGTTTTCTTTAGT	8976	False	NA	0	True	TATAAA	-23	NA	86476280	86475518	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_86475500_86476300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020948	chr11	-	677	1	FSM	ENSMUSG00000083992.2	ENSMUST00000117851.2	599	1	-37	-41	-37	41	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATATATGATGGGATGTA	NA	False	NA	NA	False	AATAAA	-32	NA	86521889	86521212	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_86521200_86521900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020951	chr11	-	607	2	Genic_Genomic	ENSMUSG00000083992.2	novel	599	1	NA	NA	-37	37	multi-exon	TRUE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTATATATGATGGGA	NA	False	NA	NA	False	AATAAA	-28	NA	86521889	86521216	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_86521491_86521556
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020956	chr11	+	595	2	Antisense	novelGene_ENSMUSG00000083992.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAGTTATTTTCATGTTT	NA	False	NA	NA	False	NA	NA	NA	86521216	86521889	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr11_+_86521527_86521604
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000020965	chr11	+	915	1	Antisense	novelGene_ENSMUSG00000083992.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTTCGGGCTGGTGAG	NA	False	NA	NA	False	AAAAAG	-2	NA	86521216	86522131	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr11_+_86521200_86522100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021004	chr11	-	3224	4	FSM	ENSMUSG00000020495.14	ENSMUST00000020801.14	3218	4	-6	0	-6	0	multi-exon	FALSE	canonical	3	76	junction_2	5.65685424949238	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTATCTGTTTTGTC	NA	False	NA	1	True	AATAAA	-35	NA	86977606	86968557	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_86968977_86970991_86971865_86974425_86974572_86975820
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021020	chr11	+	1203	4	ISM	ENSMUSG00000020492.12	ENSMUST00000142263.8	861	5	5	1770	5	757	5prime_fragment	FALSE	canonical	3	5	junction_1	91.9818822739928	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTTTAGACTTTCTAT	NA	False	NA	5	True	AATAAA	-23	NA	87000081	87013690	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_87000131_87006970_87007017_87008493_87008671_87012759
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021044	chr11	-	2034	9	FSM	ENSMUSG00000007646.14	ENSMUST00000067692.13	3944	9	2	1908	2	38	multi-exon	FALSE	canonical	3	130	junction_1	12.5940213990607	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGTATATGTATCTGT	NA	False	NA	0	True	AATAAA	-20	NA	87295347	87269378	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_87270314_87271657_87271719_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295129
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021046	chr11	-	1597	8	ISM	ENSMUSG00000007646.14	ENSMUST00000153073.8	2061	10	2990	-38	2907	38	3prime_fragment	FALSE	canonical	3	11	junction_2	64.2688866864704	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGTATATGTATCTGT	1712	False	NA	0	True	AATAAA	-20	NA	87292342	87269378	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_87270314_87271657_87271719_87279073_87279154_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021060	chr11	+	175	1	Intergenic	novelGene_58	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTTTTTAAATTAGGT	NA	False	NA	NA	False	NA	NA	NA	87323494	87323669	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_+_87323500_87323700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021062	chr11	+	215	1	FSM	ENSMUSG00000119262.1	ENSMUST00000240253.1	215	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGGTTTATCTTAAAGGGT	2419	False	NA	NA	False	NA	NA	NA	87334062	87334277	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_87334100_87334300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021076	chr11	+	216	1	FSM	ENSMUSG00002075931.1	ENSMUST00020182511.1	216	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTTTTATTTTACATGTT	NA	False	NA	NA	False	NA	NA	NA	87362193	87362409	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_87362200_87362400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021125	chr11	-	1436	1	ISM	ENSMUSG00000020483.15	ENSMUST00000178105.3	2187	2	3052	0	3052	0	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTGGGGTTTCTTTGGG	3743	False	NA	0	True	ATTAAA	-22	NA	87871786	87870350	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_87870400_87871800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021169	chr11	+	1429	5	FSM	ENSMUSG00000023723.18	ENSMUST00000118784.8	1404	5	-25	0	-2	0	multi-exon	FALSE	canonical	3	37	junction_1	110.143939915004	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCTCTATTTGTGGG	NA	False	NA	19	True	AATAAA	-19	NA	88095211	88102333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_88095407_88096014_88096186_88100678_88100757_88100929_88101057_88101475
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021193	chr11	-	3693	11	FSM	ENSMUSG00000018428.16	ENSMUST00000018572.11	3758	11	65	0	65	0	multi-exon	FALSE	canonical	3	816	junction_2	49.6891336209437	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGAGTCCATTTTTTCTT	NA	False	NA	92	True	TATAAA	-7	NA	88755347	88721617	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021198	chr11	+	743	1	Intergenic	novelGene_59	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCACTTCTTCTGGATCTA	NA	False	NA	NA	False	NA	NA	NA	88781005	88781748	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_+_88781000_88781700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021229	chr11	-	723	3	NNC	ENSMUSG00000057534.14	novel	704	3	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	30.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCGCGTCATACT	6786	False	NA	0	True	AATAAA	-26	NA	88857776	88855483	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_88856100_88857540_88857594_88857722
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021239	chr11	+	1118	4	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-2719	-17538	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	476.051117703411	299	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTATTTATTTAGCTTTC	6712	False	NA	NA	False	NA	NA	NA	88858358	88864242	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_88858476_88861243_88861306_88861723_88861820_88863399
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021253	chr11	+	1094	4	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-2699	-17540	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	401.889150001451	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTATTTATTTAGCTT	6732	False	NA	NA	False	NA	NA	NA	88858378	88864240	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_88858476_88861243_88861351_88861723_88861820_88863446
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021255	chr11	+	1112	4	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-2699	-17540	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	476.051117703411	57	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTATTTATTTAGCTT	6732	False	NA	NA	False	NA	NA	NA	88858378	88864240	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_88858476_88861243_88861306_88861723_88861820_88863383
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021312	chr11	+	959	3	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-7	-17540	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	319	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTATTTATTTAGCTT	9424	False	NA	NA	False	NA	NA	NA	88861070	88864240	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_88861099_88861243_88861381_88863446
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021313	chr11	+	760	4	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-7	-17835	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	260.898873554913	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCGCGTCATACT	9424	False	NA	15	True	AATAAA	-26	NA	88861070	88863945	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_88861099_88861243_88861381_88861723_88861820_88863446
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021315	chr11	+	1102	4	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-7	-17540	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	300.756084264678	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTATTTATTTAGCTT	9424	False	NA	NA	False	NA	NA	NA	88861070	88864240	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_88861099_88861243_88861381_88861723_88861820_88863399
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021316	chr11	+	810	4	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-7	-17835	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	300.756084264678	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCGCGTCATACT	9424	False	NA	15	True	AATAAA	-26	NA	88861070	88863945	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_88861099_88861243_88861384_88861723_88861820_88863399
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021319	chr11	+	1110	4	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-7	-17540	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	433.463570172473	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTATTTATTTAGCTT	9424	False	NA	NA	False	NA	NA	NA	88861070	88864240	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_88861099_88861243_88861306_88861723_88861820_88863316
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021322	chr11	+	667	3	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-7	-17835	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	319	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCGCGTCATACT	9424	False	NA	15	True	AATAAA	-26	NA	88861070	88863945	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_88861099_88861243_88861384_88863446
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021324	chr11	+	980	4	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-7	-17540	at_least_one_novel_splicesite	FALSE	canonical	3	287	junction_3	313.501018959889	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTATTTATTTAGCTT	9424	False	NA	NA	False	NA	NA	NA	88861070	88864240	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_88861099_88861243_88861306_88861723_88861820_88863446
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021325	chr11	+	1043	4	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-7	-17540	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	433.463570172473	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTATTTATTTAGCTT	9424	False	NA	NA	False	NA	NA	NA	88861070	88864240	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_88861099_88861243_88861306_88861723_88861820_88863383
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021354	chr11	+	702	4	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-7	-17835	at_least_one_novel_splicesite	FALSE	canonical	3	258	junction_1	368.592819608123	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCGCGTCATACT	9424	False	NA	15	True	AATAAA	-26	NA	88861070	88863945	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_88861116_88861243_88861306_88861723_88861820_88863446
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021355	chr11	+	653	3	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-7	-17835	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	129	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCGCGTCATACT	9424	False	NA	15	True	AATAAA	-26	NA	88861070	88863945	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_88861116_88861243_88861306_88863399
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021367	chr11	+	910	3	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-7	-17540	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	887	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTATTTATTTAGCTT	9424	False	NA	NA	False	NA	NA	NA	88861070	88864240	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_88861125_88861243_88861306_88863446
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021377	chr11	+	670	3	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-7	-17835	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	887	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCGCGTCATACT	9424	False	NA	15	True	AATAAA	-26	NA	88861070	88863945	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_88861180_88861243_88861306_88863446
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021382	chr11	-	738	2	Antisense	novelGene_ENSMUSG00000081766.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCCATGCTGTCTTAAAT	617	False	NA	NA	False	NA	NA	NA	88863945	88861070	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr11_-_88861303_88863439
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021384	chr11	+	1188	3	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-7	-17540	intron_retention	FALSE	canonical	0	0	junction_2	527	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTATTTATTTAGCTT	9424	False	NA	NA	False	NA	NA	NA	88861070	88864240	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_88861306_88861723_88861820_88863383
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021400	chr11	+	923	2	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-7	-17835	intron_retention	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCGCGTCATACT	9424	False	NA	15	True	AATAAA	-26	NA	88861070	88863945	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_88861351_88863302
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021401	chr11	+	836	2	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-7	-17835	intron_retention	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCGCGTCATACT	9424	False	NA	15	True	AATAAA	-26	NA	88861070	88863945	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_88861351_88863389
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021405	chr11	+	1121	2	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-7	-17540	intron_retention	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTATTTATTTAGCTT	9424	False	NA	NA	False	NA	NA	NA	88861070	88864240	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_88861351_88863399
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021418	chr11	+	1154	2	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-7	-17540	intron_retention	FALSE	canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTATTTATTTAGCTT	9424	False	NA	NA	False	NA	NA	NA	88861070	88864240	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_88861384_88863399
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021452	chr11	+	1108	4	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	3	-17540	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	300.756084264678	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTATTTATTTAGCTT	9434	False	NA	NA	False	NA	NA	NA	88861080	88864240	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_88861099_88861243_88861381_88861723_88861820_88863383
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021508	chr11	+	1151	4	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	165	-17540	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	496.860364913747	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTATTTATTTAGCTT	9596	False	NA	NA	False	NA	NA	NA	88861242	88864240	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_88861306_88861723_88861820_88862178_88862314_88863383
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021537	chr11	+	1333	1	ISM	ENSMUSG00000000275.17	ENSMUST00000107896.10	5590	9	19585	0	19585	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACATTGTCCTGCCTTTTG	3855	False	NA	24	True	NA	NA	NA	88909786	88911119	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_88909800_88911100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021548	chr11	+	1661	1	ISM	ENSMUSG00000003948.18	ENSMUST00000004050.7	2677	7	27437	16	27437	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTGTCTGGAGCATAT	NA	False	NA	13	True	AATAAA	-18	NA	90167738	90169399	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_90167700_90169400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021557	chr11	-	2076	16	FSM	ENSMUSG00000020541.13	ENSMUST00000020849.9	4308	16	7	2225	1	0	multi-exon	FALSE	canonical	3	215	junction_9	19.1849478034792	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTGTTGTTTTGTCT	NA	False	NA	-1	True	ATTAAA	-18	NA	90578426	90536515	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_90537136_90537660_90537726_90540173_90540250_90540611_90540715_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574140_90575887_90575973_90578338
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021592	chr11	-	626	5	NNC	ENSMUSG00000020857.12	novel	1012	5	NA	NA	-98	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3081.54092947019	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTGTTCAGTACTCA	NA	False	NA	-28	True	NA	NA	NA	93846707	93840639	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_93840873_93842733_93842839_93843625_93843728_93846320_93846451_93846651
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021593	chr11	-	651	5	NNC	ENSMUSG00000020857.12	novel	1012	5	NA	NA	-125	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3104.44498864129	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTGTTCAGTACTCA	NA	False	NA	-28	True	NA	NA	NA	93846734	93840639	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_93840873_93842725_93842839_93843625_93843718_93846320_93846451_93846651
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021596	chr11	-	622	5	NNC	ENSMUSG00000020857.12	novel	1012	5	NA	NA	-96	0	at_least_one_novel_splicesite	FALSE	canonical	1	59	junction_3	3079.91416276493	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTGTTCAGTACTCA	NA	False	NA	-28	True	NA	NA	NA	93846705	93840639	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_93840873_93842725_93842839_93843625_93843728_93846330_93846451_93846651
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021624	chr11	-	235	1	NIC	ENSMUSG00000020857.12	novel	1012	5	NA	NA	5735	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTGTTCAGTACTCA	NA	False	NA	-28	True	NA	NA	NA	93840874	93840639	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_93840600_93840900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021697	chr11	-	575	1	FSM	ENSMUSG00000081604.6	ENSMUST00000118048.2	411	1	-50	-114	-50	114	mono-exon	FALSE	NA	NA	NA	NA	NA	376	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAAAATTGGAATCATTT	NA	False	NA	NA	False	NA	NA	NA	93928504	93927929	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_93927900_93928500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021699	chr11	+	524	2	Antisense	novelGene_ENSMUSG00000081604.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGCAGACCTAGGCTGG	3469	False	NA	NA	False	NA	NA	NA	93927959	93930634	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr11_+_93928466_93930616
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021730	chr11	-	2002	12	FSM	ENSMUSG00000020863.16	ENSMUST00000166312.8	5244	12	-5	3247	-5	2	multi-exon	FALSE	canonical	3	40	junction_1	82.4268270539502	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGATTGTCTGTGTCATTG	NA	False	NA	-3	True	AATAAA	-25	NA	94212789	94181962	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_94182405_94183752_94183859_94183963_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021758	chr11	-	1204	4	ISM	ENSMUSG00000020865.17	ENSMUST00000178136.8	5005	31	40823	-6	-967	6	intron_retention	FALSE	canonical	3	69	junction_3	10.6249183003395	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATGTTACCTTCTTCTG	NA	False	NA	2	True	AATAAA	-23	NA	94242979	94234114	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_94234602_94236772_94236968_94241761_94241929_94242624
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021772	chr11	-	749	1	ISM	ENSMUSG00000076435.4	ENSMUST00000103164.4	3154	16	44021	0	6047	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGATTGGACTGTAACTC	7788	False	NA	-4	True	AATAAA	-19	NA	94448676	94447927	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_94447900_94448700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021776	chr11	+	2780	7	FSM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	57	0	10	0	multi-exon	FALSE	canonical	3	2480	junction_6	120.266371026983	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTTTGTGCTG	NA	False	NA	27	True	ATTAAA	-18	NA	94520649	94536042	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045_94532220_94534119
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021788	chr11	+	958	4	FSM	ENSMUSG00000024414.14	ENSMUST00000025278.8	756	4	-185	-17	-185	17	multi-exon	FALSE	canonical	3	766	junction_3	47.8632310744781	3633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGGCTGCTTCCTGAGG	NA	False	NA	36	True	NA	NA	NA	94544407	94550932	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_94544668_94547312_94547445_94547808_94547877_94550434
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021804	chr11	+	860	4	FSM	ENSMUSG00000024414.14	ENSMUST00000125148.2	439	4	-37	-384	-17	12	multi-exon	FALSE	canonical	3	93	junction_1	344.111416065592	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGACAGGTGGCTGCTTCC	NA	False	NA	31	True	NA	NA	NA	94544819	94550927	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_94544987_94547312_94547445_94547808_94547877_94550434
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021815	chr11	-	760	4	NNC	ENSMUSG00000081478.2	novel	354	3	NA	NA	-4304	-180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCGGTGGTTTTGAA	NA	False	NA	-4	True	AATAAA	-16	NA	94708478	94703624	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_94703927_94704122_94704207_94704693_94704717_94708127
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021830	chr11	-	1637	1	Genic_Genomic	ENSMUSG00000038909.17	novel	NA	NA	NA	NA	6003	4	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGCTCTGAAGCTTGTT	NA	False	NA	-1	True	AATAAA	-21	NA	95166717	95165080	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_95165100_95166700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021840	chr11	+	748	3	NNC	ENSMUSG00000085143.2	novel	630	3	NA	NA	-13	98	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTACGGAGCTGCTCAG	NA	False	NA	NA	False	AATAAA	-14	NA	95201241	95215420	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_95201280_95210002_95210283_95214990
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021857	chr11	+	1268	8	NNC	ENSMUSG00000020873.16	novel	1299	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	116.229716246645	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGAGACCCTGCTGCTGC	NA	False	NA	21	True	AATAAA	-22	NA	95275729	95282602	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_95275940_95276626_95276731_95277336_95277456_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021863	chr11	+	167	1	ISM	ENSMUSG00000020873.16	ENSMUST00000021243.16	1523	9	6918	0	1625	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGAGACCCTGCTGCTGC	NA	False	NA	21	True	AATAAA	-22	NA	95282435	95282602	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_95282400_95282600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021897	chr11	+	1763	7	NNC	ENSMUSG00000038845.12	novel	1799	7	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2157.58865531768	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGGGTGTGTTTTCAATT	NA	False	NA	11	True	AATAAA	-25	NA	95557822	95571599	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_95557869_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568977_95570519
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021910	chr11	+	1001	7	NNC	ENSMUSG00000038845.12	novel	1799	7	NA	NA	0	329	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2157.58865531768	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCAAGCGAAGCTTTTAT	NA	False	NA	9	True	AATAAA	-25	NA	95557835	95570863	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_95557869_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568964_95570519
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021960	chr11	-	236	1	Intergenic	novelGene_60	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGTTTCTCTCTATGG	8692	False	NA	NA	False	NA	NA	NA	95823120	95822884	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_-_95822900_95823100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000021979	chr11	-	387	1	FSM	ENSMUSG00000093358.3	ENSMUST00000175617.3	92	1	-132	-163	-132	163	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGTTTGTTTCTTAACC	NA	False	NA	NA	False	AATAAA	-30	NA	95854341	95853954	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_95854000_95854300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022006	chr11	+	868	7	NNC	ENSMUSG00000006058.11	novel	849	7	NA	NA	-13	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	261.818427328729	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATTCCAAGTTATTTTT	3250	False	NA	6	True	AATAAA	-28	NA	95925763	95938241	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_95925894_95926144_95926196_95930104_95930244_95932450_95932556_95934229_95934303_95935986_95936136_95938020
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022046	chr11	-	799	5	NNC	ENSMUSG00000006057.16	novel	4715	5	NA	NA	157	4	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	4457.0076284431	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCCTGTGCCTGTCTTTC	3725	False	NA	-2	True	NA	NA	NA	95966250	95963808	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95965991
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022069	chr11	-	588	5	NNC	ENSMUSG00000006057.16	novel	596	5	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_3	4481.82083533021	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGCCTGTCT	3525	False	NA	-5	True	NA	NA	NA	95966450	95963811	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_95964045_95964348_95964528_95964787_95964849_95965812_95965860_95966382
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022072	chr11	-	564	5	NNC	ENSMUSG00000006057.16	novel	4715	5	NA	NA	21	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	4430.04102689806	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGCCTGTCT	3500	False	NA	-5	True	NA	NA	NA	95966475	95963811	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_95964045_95964344_95964528_95964787_95964866_95965812_95965860_95966452
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022074	chr11	-	697	6	NNC	ENSMUSG00000006057.16	novel	4715	5	NA	NA	21	1	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_4	4919.9915203179	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGCCTGTCT	3500	False	NA	-5	True	NA	NA	NA	95966475	95963811	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_95964045_95964348_95964528_95964787_95964866_95965450_95965588_95965812_95965860_95966452
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022077	chr11	-	577	4	NNC	ENSMUSG00000006057.16	novel	596	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5078.28201483752	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGCCTGTCT	3530	False	NA	-5	True	NA	NA	NA	95966445	95963811	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_95964045_95964348_95964528_95964787_95964890_95966382
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022091	chr11	-	733	6	NNC	ENSMUSG00000006057.16	novel	4715	5	NA	NA	21	1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	4910.35017081267	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGCCTGTCT	3500	False	NA	-5	True	NA	NA	NA	95966475	95963811	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_95964045_95964348_95964528_95964787_95964866_95965414_95965588_95965812_95965860_95966452
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022116	chr11	-	232	1	Intergenic	novelGene_61	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTAGTGAATCACAGTAA	NA	False	NA	-15	True	AATAAA	-20	NA	95989969	95989737	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_-_95989700_95990000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022159	chr11	-	1390	2	Antisense	novelGene_ENSMUSG00000075587.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGCCTCTGCCTTCT	5986	False	NA	NA	False	NA	NA	NA	96283540	96139428	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr11_-_96140148_96282869
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022162	chr11	+	1370	2	Genic_Genomic	ENSMUSG00000075587.6_ENSMUSG00000083337.2	novel	557	1	NA	NA	-30	48	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCAGGTTCAACCCTCT	5773	False	NA	NA	False	AATAAA	-32	NA	96139428	96283540	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_+_96140163_96282904
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022180	chr11	+	1183	6	NNC	ENSMUSG00000018666.14	novel	1251	6	NA	NA	-3	7	at_least_one_novel_splicesite	FALSE	canonical	3	188	junction_5	206.095705923243	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTCTTTTTTTTTCCC	NA	False	NA	22	True	AATAAA	-23	NA	96679949	96698982	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441_96697591_96698628
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022187	chr11	+	1278	6	FSM	ENSMUSG00000018666.14	ENSMUST00000093943.10	1251	6	-24	-3	-2	3	multi-exon	FALSE	canonical	3	29	junction_5	266.87570140423	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTTTTGGTGGGGGGG	NA	False	NA	NA	False	ATTAAA	-18	NA	96679960	96699469	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441_96697591_96699009
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022214	chr11	-	1756	1	Genic_Genomic	ENSMUSG00000038615.18	novel	NA	NA	NA	NA	3557	1	mono-exon	FALSE	NA	NA	NA	NA	NA	385	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCCCCCCTCTCCCTT	3422	False	NA	-5	True	AATAAA	-34	NA	96709994	96708238	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_96708200_96710000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022222	chr11	+	936	9	FSM	ENSMUSG00000018672.16	ENSMUST00000018816.14	930	9	-6	0	0	0	multi-exon	FALSE	canonical	3	213	junction_8	11.8420595759353	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCCTTTCTTGACTTTG	769	False	NA	11	True	AATAAA	-22	NA	96740695	96752029	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_96740823_96741498_96741568_96744260_96744343_96744883_96744976_96745409_96745466_96746081_96746160_96747497_96747550_96748378_96748418_96751688
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022243	chr11	+	210	1	Antisense	novelGene_ENSMUSG00000085307.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTATCTCCAAGCCTCCA	5050	False	NA	NA	False	NA	NA	NA	96812847	96813057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr11_+_96812800_96813100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022250	chr11	-	2036	7	FSM	ENSMUSG00000018659.13	ENSMUST00000018803.12	1994	7	-33	-9	-33	9	multi-exon	FALSE	canonical	3	181	junction_4	10.434983894999	265	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTCCATTTTGTCTGC	NA	False	NA	7	True	AATAAA	-34	NA	96834845	96828641	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_96829910_96830080_96830152_96830473_96830603_96830841_96830896_96831681_96831782_96833235_96833361_96834556
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022262	chr11	-	1429	3	NNC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	23	-6511	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	150.5	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCAAGAATGAGAATTCGA	NA	False	NA	-4	True	AATAAA	-28	NA	96868514	96851555	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_96852836_96854186_96854268_96868446
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022316	chr11	+	192	1	Intergenic	novelGene_62	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTAGCCATCTTTCTGAC	NA	False	NA	NA	False	NA	NA	NA	96981134	96981326	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_+_96981100_96981300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022332	chr11	-	956	1	NIC	ENSMUSG00000001441.14	novel	2307	18	NA	NA	5665	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGCCTGGTTCTTTC	NA	False	NA	0	True	AATAAA	-15	NA	97097623	97096667	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_97096700_97097600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022343	chr11	+	1433	7	NIC	ENSMUSG00000018882.13	novel	2431	8	NA	NA	-52	-809	combination_of_known_splicesites	FALSE	canonical	3	5	junction_4	1090.58725261006	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTTCTGTACATTTT	NA	False	NA	NA	False	AATAAA	-24	NA	97206681	97219937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97217607_97217758_97218911_97219086_97219307
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022414	chr11	-	170	1	Genic_Genomic	ENSMUSG00000018537.17	novel	NA	NA	NA	NA	3417	2	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGTTCTTTGGGACA	NA	False	NA	-1	True	AATAAA	-19	NA	97579816	97579646	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_97579600_97579800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022448	chr11	+	686	6	NNC	ENSMUSG00000069744.8	novel	766	6	NA	NA	39	1	at_least_one_novel_splicesite	FALSE	canonical	2	41	junction_4	1565.2866830073	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGCCTGCCTTTG	NA	False	NA	23	True	AATAAA	-16	NA	97594298	97604327	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_97594317_97594613_97594799_97597623_97597732_97601927_97602106_97603269_97603358_97604218
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022494	chr11	-	491	5	NNC	ENSMUSG00000071415.7	novel	1059	5	NA	NA	-3	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5758.22685381533	21	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTTCCAATATCAGCT	NA	False	NA	-16	True	ATTAAA	-30	NA	97673211	97668844	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_97668991_97669090_97669205_97672183_97672289_97672631_97672716_97673169
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022540	chr11	-	255	1	FSM	ENSMUSG00000064901.3	ENSMUST00000082967.3	137	1	-116	-2	-116	2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTGAAAGATTACTTACA	NA	False	NA	-1	True	NA	NA	NA	97672717	97672462	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_97672500_97672700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022546	chr11	+	903	1	Genic_Genomic	ENSMUSG00000038366.16	novel	NA	NA	NA	NA	4439	1	mono-exon	FALSE	NA	NA	NA	NA	NA	467	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGCTTCTTCCTCTTTGA	1873	False	NA	11	True	AATAAA	-22	NA	97728688	97729591	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_+_97728700_97729600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022562	chr11	-	423	1	ISM	ENSMUSG00000017417.15	ENSMUST00000017561.15	2881	14	62784	0	62739	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTCGCGCCTGCGTGTA	NA	False	NA	-7	True	AATAAA	-17	NA	97814486	97814063	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_97814100_97814500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022568	chr11	+	188	1	Antisense	novelGene_ENSMUSG00000038352.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTACCAGATGCCGTGT	213	False	NA	18	True	NA	NA	NA	97884800	97884988	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr11_+_97884800_97885000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022583	chr11	+	724	6	NNC	ENSMUSG00000017404.13	novel	751	6	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6298.77421725847	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGCTGCTGTGTCTTA	NA	False	NA	16	True	AATAAA	-34	NA	97917772	97921319	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_97917817_97918648_97918756_97919176_97919295_97920220_97920342_97920600_97920712_97921096
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022589	chr11	+	731	6	NNC	ENSMUSG00000017404.13	novel	751	6	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	6298.41575636287	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGCTGCTGTGTCTTA	NA	False	NA	16	True	AATAAA	-34	NA	97917774	97921319	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_97917817_97918648_97918760_97919171_97919295_97920220_97920342_97920600_97920712_97921096
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022634	chr11	+	521	3	ISM	ENSMUSG00000017404.13	ENSMUST00000017548.7	751	6	2389	15	2356	-15	3prime_fragment	FALSE	canonical	3	13947	junction_2	1444.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTTGTTTAGCAGTTT	NA	False	NA	0	True	AATAAA	-18	NA	97920138	97921303	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_97920342_97920600_97920712_97921096
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022655	chr11	-	1391	10	FSM	ENSMUSG00000018160.16	ENSMUST00000129557.2	1372	10	-18	-1	-1	1	multi-exon	FALSE	canonical	3	39	junction_1	68.4675285747617	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGACTTTGCATATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	98084120	98060735	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_98061267_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022675	chr11	-	720	4	NNC	ENSMUSG00000002580.8	novel	747	4	NA	NA	9	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	360.361238512444	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTGTCAACTGGCGTG	NA	False	NA	-11	True	AATAAA	-14	NA	98329808	98328545	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_98328972_98329062_98329140_98329472_98329571_98329689
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022681	chr11	+	318	1	ISM	ENSMUSG00000019312.11	ENSMUST00000019456.5	2397	15	8222	0	1267	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGTCCTGTCTGGCA	NA	False	NA	18	True	AATAAA	-18	NA	98345881	98346199	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_98345900_98346200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022688	chr11	-	1213	1	ISM	ENSMUSG00000038150.8	ENSMUST00000052919.8	2184	4	4900	0	4900	0	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGCTTCCTG	6223	False	NA	1	True	AATAAA	-23	NA	98473294	98472081	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_98472100_98473300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022709	chr11	-	1290	7	ISM	ENSMUSG00000017210.15	ENSMUST00000125064.8	4577	24	21031	6	200	-6	3prime_fragment	FALSE	canonical	3	123	junction_5	26.4664357672548	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTGCTTGTGTGGGG	NA	False	NA	-8	True	AATAAA	-17	NA	98598629	98595422	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022714	chr11	-	434	3	ISM	ENSMUSG00000017210.15	ENSMUST00000137328.8	2830	19	-1	19664	-1	-9868	5prime_fragment	TRUE	canonical	3	29	junction_2	61	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATATTACATTTATTTAC	NA	False	NA	NA	False	AATGAA	-1	NA	98620245	98619331	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_98619524_98619610_98619814_98620206
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022723	chr11	+	1307	3	ISM	ENSMUSG00000058756.14	ENSMUST00000064187.12	2452	10	21648	0	9873	0	3prime_fragment	FALSE	canonical	3	46	junction_2	2	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGCCTCCTCCAGG	7521	False	NA	29	True	NA	NA	NA	98654284	98659832	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_98654614_98655103_98655232_98658982
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022748	chr11	-	1720	11	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	23150	0	221	0	3prime_fragment	FALSE	canonical	3	1094	junction_4	253.173873059603	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTCCTCTTATTTTAAC	NA	False	NA	0	True	AATAAA	-22	NA	98891865	98883768	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022801	chr11	-	883	4	ISM	ENSMUSG00000020912.5	ENSMUST00000017741.4	1852	8	3840	-2	3840	2	3prime_fragment	FALSE	canonical	1	1	junction_3	2.62466929133727	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGCCTCTCCTTGATT	9352	False	NA	NA	False	ATTAAA	-22	NA	99309245	99306489	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_99306935_99307720_99307792_99308740_99308962_99309099
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022805	chr11	+	436	2	Genic_Genomic	ENSMUSG00000086688.5	novel	948	1	NA	NA	928	939	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATGGAAAAATATTCAAC	NA	False	NA	NA	False	AATAAA	-20	NA	99823915	99824874	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_+_99824147_99824669
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022832	chr11	+	599	4	NNC	ENSMUSG00000035530.14	novel	1322	4	NA	NA	100	10	at_least_one_novel_splicesite	FALSE	canonical	2	164	junction_1	5816.94148347929	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGAAGTCCCTCATTTA	4057	False	NA	9	True	AATAAA	-23	NA	100210810	100212369	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_100210987_100211561_100211656_100211773_100211876_100212142
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022852	chr11	+	642	4	NNC	ENSMUSG00000035530.14	novel	1322	4	NA	NA	101	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5686.78188628878	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTAGTCTTGAAGTCC	4058	False	NA	1	True	AATAAA	-15	NA	100210811	100212361	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_100210987_100211491_100211638_100211773_100211876_100212142
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022853	chr11	+	638	4	NNC	ENSMUSG00000035530.14	novel	1322	4	NA	NA	101	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5894.19558171898	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTAGTCTTGAAGTCCC	4058	False	NA	2	True	AATAAA	-16	NA	100210811	100212362	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_100210987_100211514_100211656_100211773_100211876_100212142
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022863	chr11	+	1487	3	ISM	ENSMUSG00000035530.14	ENSMUST00000049385.14	1322	4	101	1	101	-1	intron_retention	FALSE	canonical	3	11207	junction_1	507	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGATGTCCAGATTGCA	4058	False	NA	20	True	AATAAA	-16	NA	100210811	100212921	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_100210987_100211491_100211656_100211773
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022875	chr11	+	1732	3	FSM	ENSMUSG00000035530.14	ENSMUST00000139846.2	447	3	-532	-753	101	6	multi-exon	FALSE	canonical	3	12221	junction_1	273.5	1900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGATTGCACTTGGTC	4058	False	NA	27	True	AATAAA	-23	NA	100210811	100212928	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_100211656_100211773_100211876_100212142
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022915	chr11	+	1555	5	ISM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	6291	-16	-1050	16	3prime_fragment	FALSE	canonical	3	27	junction_1	4.63680924774785	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATGTCTGGTTTTCTTTT	NA	False	NA	29	True	AATAAA	-30	NA	100312813	100315666	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_100312916_100313451_100313645_100313910_100314054_100314261_100314426_100314713
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022956	chr11	+	524	1	ISM	ENSMUSG00000006784.15	ENSMUST00000092684.12	2240	12	25833	0	21893	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGAGTGACACTGTGC	NA	False	NA	NA	False	ATTAAA	-22	NA	100462265	100462789	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_100462300_100462800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022985	chr11	+	2081	4	FSM	ENSMUSG00000017837.13	ENSMUST00000017981.10	2097	4	19	-3	19	3	multi-exon	FALSE	canonical	3	328	junction_1	10.0332779621949	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCCCCTACCCCTTTT	NA	False	NA	20	True	AATAAA	-27	NA	100513720	100518436	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_100513835_100515017_100515126_100515768_100516011_100516819
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000022996	chr11	-	394	1	Genic_Genomic	ENSMUSG00000019173.12	novel	NA	NA	NA	NA	14819	6	mono-exon	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTGGTGTCTGAAGTG	7182	False	NA	-4	True	ATTAAA	-23	NA	100606222	100605828	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_100605800_100606200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023028	chr11	+	2089	10	FSM	ENSMUSG00000001755.13	ENSMUST00000001806.10	2138	10	50	-1	-3	1	multi-exon	FALSE	canonical	3	106	junction_1	26.2908705931015	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTGGTTTTCTGTTT	3561	False	NA	26	True	ATTAAA	-17	NA	100973440	100977446	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_100973517_100973824_100974533_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023034	chr11	+	380	1	Genic_Genomic	ENSMUSG00000001755.13	novel	NA	NA	NA	NA	2346	1	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTGGTTTTCTGTTT	7187	False	NA	26	True	ATTAAA	-17	NA	100977066	100977446	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_+_100977100_100977400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023088	chr11	-	558	2	ISM	ENSMUSG00000035172.16	ENSMUST00000139200.8	1410	6	1943	0	1647	0	3prime_fragment	FALSE	canonical	3	92	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCCTGTGGGAGTGTTG	8365	False	NA	3	True	AAGAAA	-22	NA	101054503	101053504	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_101053891_101054331
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023112	chr11	+	1077	6	NNC	ENSMUSG00000078656.12	novel	1106	6	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_4	483.779453883689	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGCCTGTTACTACTGC	NA	False	NA	18	True	ATTAAA	-15	NA	101144551	101150373	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147711_101147780_101149735
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023137	chr11	-	887	2	FSM	ENSMUSG00000017188.4	ENSMUST00000017332.4	886	2	112	-113	-59	113	multi-exon	FALSE	canonical	3	1870	junction_1	0	954	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTTTTCCGTGAGATCT	5614	False	NA	NA	False	NA	NA	NA	101169828	101168680	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_101169279_101169539
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023148	chr11	-	697	1	ISM	ENSMUSG00000035086.14	ENSMUST00000130916.8	4365	12	13332	2306	3544	4	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTACGCCTGTATGTTTT	NA	False	NA	2	True	AATAAA	-29	NA	101179780	101179083	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_101179100_101179800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023168	chr11	+	2666	11	FSM	ENSMUSG00000078652.10	ENSMUST00000019470.14	2664	11	-2	0	-2	0	multi-exon	FALSE	canonical	3	1173	junction_6	119.560068584791	307	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGGTGCTGTACTCTG	NA	False	NA	34	True	ATTAAA	-35	NA	101207036	101214363	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023204	chr11	-	1526	12	FSM	ENSMUSG00000075528.14	ENSMUST00000070395.9	1516	12	166	-176	-43	176	multi-exon	FALSE	canonical	3	448	junction_11	68.1448384565145	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGTATAGTTGCTTA	NA	False	NA	0	True	ATTAAA	-41	NA	101308275	101297488	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308061_101308175
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023209	chr11	-	959	8	ISM	ENSMUSG00000075528.14	ENSMUST00000070395.9	1516	12	6106	0	3070	0	3prime_fragment	FALSE	canonical	3	507	junction_6	61.0660398625111	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTGTATACTGCCATT	NA	False	NA	-21	True	AGTAAA	-16	NA	101302335	101297664	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023225	chr11	-	188	1	NIC	ENSMUSG00000097239.8	novel	1898	17	NA	NA	17493	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTGTATACTGCCATT	4408	False	NA	-21	True	AGTAAA	-16	NA	101297852	101297664	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_101297700_101297900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023231	chr11	-	812	6	ISM	ENSMUSG00000097487.8	ENSMUST00000107252.9	853	7	393	-5	-44	5	3prime_fragment	FALSE	canonical	2	4	junction_5	2.65329983228432	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCCTTCCTGTATTCTC	NA	False	NA	-5	True	AATAAA	-19	NA	101315102	101309632	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_101310013_101310500_101310555_101312690_101312781_101314605_101314705_101314802_101314870_101314980
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023249	chr11	+	549	5	NNC	ENSMUSG00000063316.14	novel	614	5	NA	NA	-66	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5091.99216294566	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGCCTATTGCATTTG	2315	False	NA	67	True	ATTAAA	-23	NA	101333197	101336360	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_101333287_101333548_101333632_101334326_101334497_101336045_101336157_101336264
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023256	chr11	+	524	5	NNC	ENSMUSG00000063316.14	novel	614	5	NA	NA	-55	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5099.537577075	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGTCTGCCTATTGCAT	2326	False	NA	64	True	ATTAAA	-20	NA	101333208	101336357	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_101333283_101333548_101333632_101334326_101334497_101336045_101336161_101336275
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023278	chr11	+	503	5	NNC	ENSMUSG00000063316.14	novel	614	5	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5099.537577075	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTGTCTGCCTATTGC	2349	False	NA	62	True	ATTAAA	-18	NA	101333231	101336355	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_101333283_101333548_101333632_101334326_101334497_101336045_101336165_101336275
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023300	chr11	+	478	5	NNC	ENSMUSG00000063316.14	novel	614	5	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5091.99216294566	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAAGTGTCTGCCTATT	2364	False	NA	60	True	ATTAAA	-16	NA	101333246	101336353	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_101333283_101333559_101333632_101334326_101334497_101336045_101336157_101336264
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023339	chr11	+	1382	5	FSM	ENSMUSG00000001313.13	ENSMUST00000134980.2	831	5	197	-748	197	0	multi-exon	FALSE	canonical	3	18	junction_1	62.3097103186975	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGGACTTAGTTTTGTT	8491	False	NA	21	True	AATAAA	-21	NA	101356506	101362679	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_101356760_101359758_101359847_101360838_101360949_101361543_101361679_101361883
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023348	chr11	-	755	1	ISM	ENSMUSG00000017146.13	ENSMUST00000017290.11	6572	23	62361	0	18660	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACAAAGAATGACTGA	NA	False	NA	-11	True	AATAAA	-15	NA	101380344	101379589	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_101379600_101380300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023397	chr11	+	1325	6	NIC	ENSMUSG00000010362.10	novel	1124	7	NA	NA	7	0	intron_retention	FALSE	canonical	3	866	junction_1	132.095420056866	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGTGGTTTGGGTCCC	NA	False	NA	29	True	AATAAA	-28	NA	101518774	101526926	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526573
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023401	chr11	+	1086	7	NNC	ENSMUSG00000010362.10	novel	1124	7	NA	NA	9	-13	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	433.752873829737	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGTAAATAGTGTG	NA	False	NA	16	True	AATAAA	-15	NA	101518776	101526913	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_101518891_101519114_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526573
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023402	chr11	+	1097	7	NNC	ENSMUSG00000010362.10	novel	1124	7	NA	NA	9	-13	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_6	426.252924395312	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGTAAATAGTGTG	NA	False	NA	16	True	AATAAA	-15	NA	101518776	101526913	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_101518891_101519098_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526578
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023408	chr11	+	1391	6	NNC	ENSMUSG00000010362.10	novel	1124	7	NA	NA	9	-13	intron_retention	FALSE	canonical	3	6	junction_3	454.674125061016	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGTAAATAGTGTG	NA	False	NA	16	True	AATAAA	-15	NA	101518776	101526913	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_101519279_101521063_101521187_101521645_101521806_101524546_101524727_101525613_101525700_101526573
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023438	chr11	+	273	1	ISM	ENSMUSG00000034936.3	ENSMUST00000039388.3	1382	2	2019	0	2019	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTGATCTGGTAACT	4569	False	NA	NA	False	ATTAAA	-18	NA	101558385	101558658	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_101558400_101558700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023446	chr11	-	1324	6	ISM	ENSMUSG00000017724.15	ENSMUST00000164750.8	2336	13	11648	-2	-1481	2	3prime_fragment	FALSE	canonical	3	16	junction_2	2.71293199325011	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTCTTTGCTTCCATGA	NA	False	NA	1	True	AATAAA	-26	NA	101664488	101660565	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_101661417_101661794_101661897_101662153_101662327_101662514_101662584_101662706_101662782_101664434
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023454	chr11	-	151	1	ISM	ENSMUSG00000003518.14	ENSMUST00000151678.8	4084	3	12210	0	10395	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTCTGTTTTGTGTTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	101862119	101861968	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_101862000_101862100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023496	chr11	+	220	1	ISM	ENSMUSG00000034793.16	ENSMUST00000070334.10	1404	7	4242	0	1837	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTCTTGTCTGTGCTC	NA	False	NA	5	True	AATAAA	-19	NA	102084687	102084907	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_102084700_102084900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023516	chr11	-	1078	1	ISM	ENSMUSG00000059995.13	ENSMUST00000145484.2	3102	7	3067	0	3067	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCCTGCCCACTCTCA	4074	False	NA	-6	True	AATAAA	-19	NA	102181203	102180125	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_102180100_102181200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023518	chr11	-	2520	2	ISM	ENSMUSG00000059995.13	ENSMUST00000145484.2	3102	7	1531	0	1531	0	3prime_fragment	FALSE	canonical	3	193	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCCTGCCCACTCTCA	2538	False	NA	-6	True	AATAAA	-19	NA	102182739	102180125	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_102182630_102182723
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023556	chr11	-	397	1	NIC	ENSMUSG00000018677.10	novel	1606	12	NA	NA	955	3	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGCTGTAGTGTCTTG	2625	False	NA	98	True	NA	NA	NA	102294364	102293967	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_102294000_102294400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023559	chr11	-	1535	11	FSM	ENSMUSG00000018677.10	ENSMUST00000153395.8	1564	11	30	-1	11	1	multi-exon	TRUE	canonical	3	4398	junction_2	183.250211459632	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGTGGCTGTAGTGTCT	7756	False	NA	96	True	NA	NA	NA	102298302	102293969	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_102294362_102294458_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023566	chr11	-	313	1	Intergenic	novelGene_63	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGTCGCGAAACACTGG	6767	False	NA	NA	False	ATTAAA	-17	NA	102299291	102298978	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_-_102299000_102299300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023577	chr11	+	2122	12	NNC	ENSMUSG00000034708.13	novel	2340	13	NA	NA	178	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	186.655735610679	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATCTGATTTGTTGCGC	6779	False	NA	17	True	AATAAA	-19	NA	102323788	102327635	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327081_102327160
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023606	chr11	-	1870	2	ISM	ENSMUSG00000020925.17	ENSMUST00000164506.3	2316	5	8875	-2	8677	0	3prime_fragment	FALSE	canonical	3	518	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTCTGTCTTGTTCTTT	NA	False	NA	-4	True	AATAAA	-16	NA	102579685	102575511	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_102577323_102579626
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023629	chr11	-	1774	5	FSM	ENSMUSG00000020935.9	ENSMUST00000021313.9	1744	5	-23	-7	-23	7	multi-exon	FALSE	canonical	3	1121	junction_2	32.0965340808007	760	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCACTTGGCCTTTGTTCA	8170	False	NA	2	True	NA	NA	NA	102908017	102884865	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_102885999_102888178_102888267_102890469_102890674_102890975_102891183_102907875
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023651	chr11	+	366	1	NIC	ENSMUSG00000020936.9	novel	4861	12	NA	NA	37161	-2801	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTAAATATCTTTCATG	NA	False	NA	20	True	AATAAA	-26	NA	102956571	102956937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_102956600_102956900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023729	chr11	+	1510	1	ISM	ENSMUSG00000062421.14	ENSMUST00000057921.10	2242	5	17089	0	4239	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCATGTTCTCCTGGA	NA	False	NA	31	True	AATAAA	-20	NA	103874653	103876163	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_103874700_103876200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023751	chr11	+	1031	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8377	37	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	201.516128386787	38	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGGGCAATTGCTAA	9479	False	NA	42	True	AAAACA	-43	NA	104200481	104219298	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_104200551_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023780	chr11	-	1191	1	FSM	ENSMUSG00000082706.2	ENSMUST00000117888.2	290	1	-90	-811	-90	811	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGTCACTTCACTTCT	6976	False	NA	NA	False	AATAAA	-27	NA	104462473	104461282	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_104461300_104462500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023792	chr11	+	289	3	ISM	ENSMUSG00000061086.13	ENSMUST00000123074.8	677	6	4577	-6	-62	0	3prime_fragment	FALSE	canonical	3	41	junction_2	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCGTTGATTTGTTTT	NA	False	NA	12	True	AATAAA	-26	NA	104475727	104478041	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_104475841_104476552_104476598_104477910
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023795	chr11	-	179	1	Intergenic	novelGene_64	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGCAACATAAAAAATAGCC	6442	False	NA	NA	False	NA	NA	NA	104539482	104539303	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_-_104539300_104539500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023817	chr11	-	2486	6	FSM	ENSMUSG00000019590.17	ENSMUST00000019734.11	2741	6	255	0	-18	0	multi-exon	FALSE	canonical	3	87	junction_5	37.6690854680599	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	105834983	105824527	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105834936
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023824	chr11	+	1224	4	ISM	ENSMUSG00000020681.15	ENSMUST00000001964.8	2418	14	10340	-7	8943	0	intron_retention	FALSE	canonical	1	2	junction_1	1.69967317119759	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGAGTCTGTGTCCCTT	NA	False	NA	NA	False	ATTAAA	-13	NA	105876373	105880086	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_105876544_105876815_105876915_105878841_105878965_105879254
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023827	chr11	+	1518	7	FSM	ENSMUSG00000049354.9	ENSMUST00000058438.9	5750	7	33	4199	5	-4199	multi-exon	FALSE	canonical	3	184	junction_6	15.5527775297176	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTCAGCTGTTGTG	4778	False	NA	6	True	ATTAAA	-13	NA	105927730	105945951	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_105928088_105937516_105937676_105938462_105938575_105938968_105939088_105942582_105942793_105944556_105944675_105945508
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023849	chr11	-	565	1	ISM	ENSMUSG00000040699.14	ENSMUST00000045923.10	2950	5	1538	1784	805	274	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTCTCTTGTGTGGCC	NA	False	NA	-13	True	TTTAAA	-16	NA	106049430	106048865	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_106048900_106049400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023853	chr11	-	2091	11	FSM	ENSMUSG00000069631.15	ENSMUST00000103072.10	1517	11	-42	-532	-32	14	multi-exon	TRUE	canonical	3	87	junction_9	16.6340013225922	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTTCCTTGTGTTCA	NA	False	NA	1	True	ATTAAA	-27	NA	106084430	106054141	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077950_106078007_106084291
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023859	chr11	+	191	1	Intergenic	novelGene_65	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTCACACTATACAGCA	7648	False	NA	NA	False	NA	NA	NA	106062549	106062740	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_+_106062500_106062700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023872	chr11	+	2743	9	ISM	ENSMUSG00000020705.7	ENSMUST00000021046.6	4011	18	20067	-1	-3	1	3prime_fragment	FALSE	canonical	3	440	junction_2	33.1339610520686	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTATCTTTTTATTC	NA	False	NA	29	True	ATTAAA	-16	NA	106127818	106139966	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023932	chr11	-	894	4	ISM	ENSMUSG00000020713.7	ENSMUST00000103071.4	862	5	154	-3	154	3	3prime_fragment	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCGGCTAGAGGTCTTT	7211	False	NA	NA	False	AATAAA	-17	NA	106192537	106191093	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_106191393_106191590_106191753_106191920_106192038_106192221
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023936	chr11	-	515	1	ISM	ENSMUSG00000040592.12	ENSMUST00000044228.11	1431	6	2907	0	2674	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTCGTGATATCATCTC	7763	False	NA	0	True	AATAAA	-20	NA	106202681	106202166	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_106202200_106202700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023984	chr11	-	3571	13	FSM	ENSMUSG00000020719.15	ENSMUST00000021062.12	3559	13	-12	0	-12	0	multi-exon	FALSE	canonical	3	3830	junction_8	158.443711526277	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTCATTTATTTATTC	9604	False	NA	-8	True	AATAAA	-18	NA	106679370	106671180	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023991	chr11	-	2334	13	NNC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1169.07686754217	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGAAATTGTACTTTA	9654	False	NA	-7	True	AATAAA	-19	NA	106679320	106672371	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_106673083_106673294_106673520_106674780_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000023995	chr11	-	2470	14	NIC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	10	2	combination_of_known_junctions	FALSE	canonical	3	89	junction_13	1103.10076146326	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGAAATTGTACTTTA	9275	False	NA	-7	True	AATAAA	-19	NA	106679699	106672371	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679524
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024007	chr11	+	223	1	Intergenic	novelGene_66	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGGATTCCATTGTAAAA	8126	False	NA	NA	False	TTTAAA	-18	NA	106696797	106697020	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_+_106696800_106697000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024013	chr11	-	1981	11	FSM	ENSMUSG00000018362.15	ENSMUST00000018506.13	2054	11	73	0	-18	0	multi-exon	FALSE	canonical	3	2002	junction_5	417.039386629129	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGTTTTCTTAATTGA	9739	False	NA	NA	False	AATAAA	-27	NA	106890294	106879454	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024027	chr11	-	3116	18	FSM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	48	-6	19	6	multi-exon	FALSE	canonical	3	283	junction_14	59.6645176908376	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATGTCTCTCTTTTTA	1149	False	NA	NA	False	TATAAA	-18	NA	107080159	107057482	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024031	chr11	-	674	4	ISM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	81	17907	52	1970	5prime_fragment	FALSE	canonical	3	456	junction_3	16.779617264871	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCTAATTAAATCCCACT	1182	False	NA	NA	False	NA	NA	NA	107080126	107075395	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_107075715_107077460_107077518_107077634_107077749_107079942
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024083	chr11	+	1063	3	FSM	ENSMUSG00000020611.15	ENSMUST00000106702.4	914	3	70	-219	70	219	multi-exon	TRUE	canonical	3	100	junction_2	132.5	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTAGGTTTATTGCTTGT	NA	False	NA	24	True	AATAAA	-39	NA	109253726	109271520	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_109254083_109256361_109256589_109271040
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024094	chr11	+	551	1	ISM	ENSMUSG00000020611.15	ENSMUST00000020930.14	6160	4	37988	0	37988	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGTAGCACGACGTTATT	NA	False	NA	12	True	AATAAA	-14	NA	109291644	109292195	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_109291600_109292200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024124	chr11	-	492	1	ISM	ENSMUSG00000041895.16	ENSMUST00000103060.10	2050	13	37610	0	37610	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAGTTGTTTACATTT	9125	False	NA	-6	True	AATAAA	-15	NA	109464648	109464156	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_109464200_109464600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024125	chr11	-	2009	13	NNC	ENSMUSG00000041895.16	novel	2050	13	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	32.2541986930901	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAGTTGTTTACATTT	NA	False	NA	-6	True	AATAAA	-15	NA	109502213	109464156	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_109464794_109467882_109467984_109468400_109468520_109469116_109469225_109470452_109470618_109473193_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024128	chr11	+	3376	11	FSM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	-14	-3	-14	3	multi-exon	TRUE	canonical	3	1417	junction_9	119.858458191318	910	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATCAGTTTTTCTTCCTT	NA	False	NA	23	True	AATAAA	-28	NA	109541732	109560485	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024149	chr11	+	2068	12	FSM	ENSMUSG00000020623.12	ENSMUST00000020949.12	2068	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_7	8.31308835611224	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGCATAGTATTAGTG	NA	False	NA	14	True	AGTAAA	-24	NA	110289947	110404467	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_110290252_110373364_110373432_110380970_110381020_110381587_110381702_110383338_110383459_110383721_110383839_110385120_110385173_110387164_110387293_110388722_110388801_110390208_110390349_110397531_110397578_110403614
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024163	chr11	-	1853	3	NNC	ENSMUSG00000087259.8	novel	1861	3	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	1	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCTGTAAATGTTGTCT	NA	False	NA	NA	False	TATAAA	-15	NA	113092666	112934728	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_112935987_112958167_112958213_113092116
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024167	chr11	-	779	1	Genic_Genomic	ENSMUSG00000041654.16	novel	NA	NA	NA	NA	320127	2	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTCCGTGCGATCTT	NA	False	NA	0	True	AATAAA	-21	NA	113136455	113135676	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_113135700_113136500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024201	chr11	+	2097	5	FSM	ENSMUSG00000041623.18	ENSMUST00000106621.4	2062	5	-35	0	0	0	multi-exon	TRUE	canonical	3	249	junction_1	30.335622624235	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	113575237	113585473	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_113575538_113578599_113580048_113582554_113582660_113583220_113583329_113585337
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024249	chr11	-	2951	2	FSM	ENSMUSG00000041598.8	ENSMUST00000053536.5	3008	2	57	0	57	0	multi-exon	FALSE	canonical	3	115	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTCTGACTCTTC	7420	False	NA	-2	True	ATTAAA	-15	NA	113642650	113617677	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_113620492_113642513
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024253	chr11	-	608	2	Intergenic	novelGene_67	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCGACTTTCATTATTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	114383536	114379167	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_-_114379649_114383409
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024259	chr11	+	520	6	NNC	ENSMUSG00000057322.13	novel	371	5	NA	NA	-1522	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	7635.53470557236	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114557827	114563157	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_114557973_114559345_114559436_114559606_114559641_114559731_114559793_114562559_114562683_114563090
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024264	chr11	+	435	5	FSM	ENSMUSG00000057322.13	ENSMUST00000106602.10	371	5	-64	0	-64	0	multi-exon	FALSE	canonical	3	6598	junction_1	5536.08152825625	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559285	114563157	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_114559436_114559606_114559641_114559731_114559793_114562559_114562683_114563090
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024280	chr11	+	359	5	NNC	ENSMUSG00000057322.13	novel	371	5	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7398.28795651399	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTCCTCAGTCTCT	NA	False	NA	29	True	ATTAAA	-16	NA	114559366	114563158	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_114559436_114559606_114559645_114559731_114559793_114562559_114562683_114563090
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024281	chr11	+	350	5	NNC	ENSMUSG00000057322.13	novel	371	5	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	8532.8401338593	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTCCTCAGTCTCT	NA	False	NA	29	True	ATTAAA	-16	NA	114559366	114563158	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_114559436_114559606_114559641_114559731_114559793_114562559_114562687_114563099
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024329	chr11	+	323	5	NNC	ENSMUSG00000057322.13	novel	364	5	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	8760.61999803667	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559405	114563157	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_114559453_114559606_114559641_114559731_114559793_114562559_114562683_114563099
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024366	chr11	+	298	5	NNC	ENSMUSG00000057322.13	novel	364	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	7256.17682994978	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559431	114563157	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_114559453_114559606_114559641_114559731_114559793_114562567_114562683_114563090
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024371	chr11	+	351	5	NNC	ENSMUSG00000057322.13	novel	345	5	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7941.76650295764	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559443	114563157	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_114559512_114559606_114559641_114559731_114559791_114562559_114562683_114563090
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024372	chr11	+	357	5	NNC	ENSMUSG00000057322.13	novel	345	5	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8261.69115178606	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559443	114563157	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_114559512_114559606_114559645_114559731_114559793_114562559_114562683_114563090
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024400	chr11	+	1927	6	FSM	ENSMUSG00000020733.4	ENSMUST00000021077.4	1925	6	0	-2	0	2	multi-exon	FALSE	canonical	3	130	junction_1	12.6964561984831	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGTGTCCTCCTTTGT	NA	False	NA	12	True	NA	NA	NA	115054166	115072009	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_115054778_115067176_115067339_115068049_115068204_115069875_115069917_115070832_115070923_115071140
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024412	chr11	-	383	1	ISM	ENSMUSG00000015542.18	ENSMUST00000103038.8	1143	7	4118	0	3867	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCTTGTTTGTTCACC	NA	False	NA	-5	True	AGTAAA	-16	NA	115074040	115073657	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_115073700_115074000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024413	chr11	-	1448	6	ISM	ENSMUSG00000015542.18	ENSMUST00000103039.2	1158	7	2	0	2	0	intron_retention	FALSE	canonical	2	2	junction_5	44.6345157921535	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCTTGTTTGTTCACC	NA	False	NA	-5	True	AGTAAA	-16	NA	115078179	115073657	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_115074092_115074180_115074276_115074450_115074511_115075308_115075453_115075832_115075943_115077574
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024419	chr11	-	645	3	ISM	ENSMUSG00000015542.18	ENSMUST00000103038.8	1143	7	-21	1961	2	1	5prime_fragment	FALSE	canonical	2	2	junction_1	2.5	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGTTTAGGCCCTGC	NA	False	NA	NA	False	AATAAA	-16	NA	115078179	115075618	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_115075943_115077574_115077661_115077944
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024425	chr11	-	507	1	ISM	ENSMUSG00000020734.14	ENSMUST00000003351.13	4279	13	15754	0	15754	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCCTAGCTGCCTCAC	NA	False	NA	NA	False	ATTAAA	-19	NA	115140501	115139994	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_115140000_115140500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024432	chr11	-	402	1	ISM	ENSMUSG00000044788.11	ENSMUST00000056153.8	4951	6	14219	3272	14219	-3272	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCTGCTTTGTTCCATG	NA	False	NA	NA	False	NA	NA	NA	115174121	115173719	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_115173700_115174100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024476	chr11	+	830	6	NNC	ENSMUSG00000018858.16	novel	749	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	413.897281943238	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTCCAGTGAGAGCT	NA	False	NA	16	True	AATAAA	-16	NA	115294582	115301745	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_115294781_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024504	chr11	-	608	6	NNC	ENSMUSG00000034566.11	novel	625	6	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1274.03981099493	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCGTCTCTGAGTAGATAA	NA	False	NA	-5	True	AATAAA	-20	NA	115310775	115306516	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_115306706_115306840_115306898_115307674_115307751_115308664_115308762_115309211_115309343_115310717
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024505	chr11	-	614	6	NNC	ENSMUSG00000034566.11	novel	625	6	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1306.80765225797	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCGTCTCTGAGTAGATAA	NA	False	NA	-5	True	AATAAA	-20	NA	115310775	115306516	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309343_115310713
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024506	chr11	-	604	6	NNC	ENSMUSG00000034566.11	novel	625	6	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1306.80765225797	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCGTCTCTGAGTAGATAA	NA	False	NA	-5	True	AATAAA	-20	NA	115310775	115306516	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309343_115310723
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024510	chr11	-	614	6	NNC	ENSMUSG00000034566.11	novel	625	6	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1274.03981099493	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCGTCTCTGAGTAGATAA	NA	False	NA	-5	True	AATAAA	-20	NA	115310775	115306516	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_115306706_115306840_115306904_115307674_115307751_115308664_115308762_115309211_115309343_115310717
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024521	chr11	-	539	5	NIC	ENSMUSG00000034566.11	novel	625	6	NA	NA	21	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	1372.64368555718	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCGTCTCTGAGTAGATAA	NA	False	NA	-5	True	AATAAA	-20	NA	115310767	115306516	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_115306706_115307678_115307751_115308664_115308762_115309211_115309343_115310717
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024523	chr11	-	601	6	NNC	ENSMUSG00000034566.11	novel	625	6	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	1273.31353562271	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCGTCTCTGAGTAGATAA	NA	False	NA	-5	True	AATAAA	-20	NA	115310772	115306516	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_115306706_115306840_115306898_115307678_115307751_115308664_115308762_115309211_115309343_115310717
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024568	chr11	-	191	1	NIC	ENSMUSG00000034566.11	novel	420	3	NA	NA	1137	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCGTCTCTGAGTAGATAA	NA	False	NA	-5	True	AATAAA	-20	NA	115306707	115306516	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_115306500_115306700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024593	chr11	+	646	1	ISM	ENSMUSG00000016940.19	ENSMUST00000103035.10	1764	6	10501	0	1276	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTGTCTCTCCTTCAT	NA	False	NA	28	True	NA	NA	NA	115321454	115322100	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_115321500_115322100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024618	chr11	-	961	4	NIC	ENSMUSG00000020736.13	novel	858	5	NA	NA	0	-5	intron_retention	FALSE	canonical	3	183	junction_3	12.8322510366134	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGAGGCTTTGGATCTTTG	NA	False	NA	-13	True	AATAAA	-14	NA	115382688	115381250	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_115381794_115381963_115382025_115382096_115382198_115382432
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024624	chr11	-	1436	4	NNC	ENSMUSG00000020737.13	novel	1375	5	NA	NA	-47	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	825.422046928452	5181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTCTTTCTCTTTTTTG	NA	False	NA	NA	False	AGTAAA	-27	NA	115405260	115388170	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_115389126_115392805_115392929_115393857_115394001_115405045
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024635	chr11	-	1390	4	NNC	ENSMUSG00000020737.13	novel	1375	5	NA	NA	-1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	825.422046928452	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTTTGTCTTTCTCTTT	NA	False	NA	NA	False	AGTAAA	-23	NA	115405214	115388174	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_115389126_115392801_115392929_115393857_115394001_115405045
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024642	chr11	-	952	1	Genic_Genomic	ENSMUSG00000020737.13	novel	NA	NA	NA	NA	15816	4	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTTTGTCTTTCTCTTT	NA	False	NA	NA	False	AGTAAA	-23	NA	115389126	115388174	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_115388200_115389100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024668	chr11	-	1112	4	FSM	ENSMUSG00000020738.17	ENSMUST00000153892.2	1051	4	-8	-53	-8	53	multi-exon	FALSE	canonical	3	3819	junction_1	149.312498546579	2918	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGCTCACACCTTTAAT	NA	False	NA	2	True	ATTAAA	-24	NA	115427110	115413874	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_115414596_115421171_115421244_115425377_115425510_115426923
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024686	chr11	+	2085	19	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	42	0	at_least_one_novel_splicesite	TRUE	canonical	3	80	junction_16	299.37137842857	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATTGTTAATCCTACC	NA	False	NA	12	True	AATAAA	-18	NA	115455301	115474732	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473910_115474039_115474151_115474254_115474546
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024691	chr11	+	637	5	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	484.457686490781	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATTGTTAATCCTACC	NA	False	NA	12	True	AATAAA	-18	NA	115455307	115474732	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_115455389_115455979_115456074_115457426_115457601_115474151_115474254_115474546
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024718	chr11	+	753	1	ISM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	2931	428	1989	-428	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTGGTTAAGAGTACT	NA	False	NA	9	True	AATAAA	-23	NA	115497681	115498434	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_115497700_115498400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024724	chr11	-	1222	6	NNC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	138.613707835841	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	0	True	AATAAA	-18	NA	115503760	115498743	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_115499325_115499886_115499980_115500105_115500262_115500364_115500475_115502728_115502861_115503610
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024732	chr11	-	1330	6	NNC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	147.293448598368	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	0	True	AATAAA	-18	NA	115503367	115498743	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728_115502861_115503224
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024735	chr11	-	1278	6	FSM	ENSMUSG00000020743.16	ENSMUST00000106506.8	993	6	-54	-231	-5	0	multi-exon	FALSE	canonical	2	5	junction_2	146.078608974757	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	0	True	AATAAA	-18	NA	115503758	115498743	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_115499440_115499886_115499923_115500105_115500262_115500364_115500475_115502728_115502861_115503610
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024737	chr11	-	1694	5	FSM	ENSMUSG00000020743.16	ENSMUST00000106507.9	1656	5	-38	0	-38	0	multi-exon	FALSE	canonical	3	302	junction_2	39.92101576864	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	0	True	AATAAA	-18	NA	115503367	115498743	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024738	chr11	-	1481	5	NIC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	17	0	intron_retention	FALSE	canonical	3	324	junction_4	32.8129166640212	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	0	True	AATAAA	-18	NA	115503778	115498743	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_115499440_115499886_115500262_115500364_115500475_115502728_115502861_115503610
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024767	chr11	-	928	1	NIC	ENSMUSG00000020743.16	novel	1656	5	NA	NA	3281	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	0	True	AATAAA	-18	NA	115499671	115498743	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_115498700_115499700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024817	chr11	+	447	4	ISM	ENSMUSG00000020782.19	ENSMUST00000177736.8	3612	26	30753	20	-221	-20	3prime_fragment	FALSE	canonical	3	765	junction_1	89.1827088372828	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTTTCGTCTTCACTTT	NA	False	NA	18	True	AATAAA	-3	NA	115745636	115746584	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_115745686_115745888_115745932_115746017_115746080_115746291
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024844	chr11	-	1249	8	NNC	ENSMUSG00000020766.5	novel	1406	8	NA	NA	30	-67	at_least_one_novel_splicesite	FALSE	canonical	2	33	junction_5	295.94483766198	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGGTAGCCACCTGCCTC	NA	False	NA	-37	True	AATAAA	-15	NA	115903515	115899349	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_115899541_115899628_115899792_115899873_115900025_115900746_115900929_115901066_115901143_115901388_115901509_115901852_115902043_115903339
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024864	chr11	-	2022	3	FSM	ENSMUSG00000016559.15	ENSMUST00000139378.2	773	3	-31	-1218	0	-330	multi-exon	FALSE	canonical	3	13934	junction_1	171	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGTGTCAAACCTAAATT	NA	False	NA	-15	True	AATAAA	-14	NA	115915330	115913116	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_115914362_115914450_115914605_115914707
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024897	chr11	-	1662	7	FSM	ENSMUSG00000034341.18	ENSMUST00000106444.4	1012	7	29	-679	6	0	multi-exon	FALSE	canonical	3	34	junction_3	412.44046708451	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTCTGACTCTTGTGTG	NA	False	NA	-11	True	AGTAAA	-16	NA	115977792	115969398	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_115970423_115970533_115970611_115971047_115971171_115972057_115972151_115973101_115973238_115974664_115974774_115977692
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024912	chr11	-	1071	5	NNC	ENSMUSG00000020773.12	novel	1503	4	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	54.7083174663597	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCCCCTTTCATTCCT	NA	False	NA	NA	False	NA	NA	NA	115998926	115996577	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_115996921_115997333_115997468_115997757_115997830_115998249_115998449_115998603
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024940	chr11	-	1427	8	NIC	ENSMUSG00000020775.14	novel	1411	9	NA	NA	-24	1	intron_retention	FALSE	canonical	3	763	junction_7	35.5883493891596	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAATATGTCTTCACTTTC	462	False	NA	-5	True	AATAAA	-17	NA	116029639	116022645	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025332_116025733_116026152_116029267_116029448_116029536
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024945	chr11	-	1136	8	NIC	ENSMUSG00000020775.14	novel	1411	9	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_5	284.884366087043	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAATATGTCTTCACTTT	469	False	NA	-6	True	AATAAA	-16	NA	116029632	116022646	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025332_116026016_116026152_116029267_116029448_116029536
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024971	chr11	+	594	2	FSM	ENSMUSG00000020778.13	ENSMUST00000146066.8	435	2	-89	-70	15	0	multi-exon	FALSE	canonical	1	2	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTGTGCTGATGCGG	9082	False	NA	7	True	AATAAA	-14	NA	116089695	116106144	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_116089810_116105664
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024985	chr11	-	500	1	Genic_Genomic	ENSMUSG00000020780.16	novel	NA	NA	NA	NA	15675	2	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTGGTTTTTGCATG	2378	False	NA	0	True	ATTAAA	-19	NA	116136489	116135989	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_116136000_116136500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000024992	chr11	-	1040	4	NNC	ENSMUSG00000020780.16	novel	2330	15	NA	NA	14079	2	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_3	287.567190216285	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTGGTTTTTGCATG	782	False	NA	0	True	ATTAAA	-19	NA	116138085	116135989	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_116136757_116137045_116137099_116137470_116137547_116137941
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025019	chr11	+	1087	1	NIC	ENSMUSG00000050628.7	novel	1482	3	NA	NA	3482	0	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTGTTTTTGTTTTTGC	NA	False	NA	36	True	TTTAAA	-29	NA	116328816	116329903	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_116328800_116329900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025030	chr11	+	175	1	Intergenic	novelGene_68	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTATTTTTTTATTT	NA	False	NA	18	True	NA	NA	NA	116516694	116516869	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_+_116516700_116516900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025070	chr11	+	869	6	NNC	ENSMUSG00000020812.19	novel	865	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	76.2349001442253	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTAGCATTGTGGGTAT	NA	False	NA	3	True	AATAAA	-16	NA	116562493	116566624	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_116562583_116562989_116563182_116563489_116563565_116564763_116564891_116565125_116565202_116566314
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025079	chr11	+	664	5	FSM	ENSMUSG00000020812.19	ENSMUST00000142834.8	661	5	0	-3	0	0	multi-exon	FALSE	canonical	0	0	junction_1	73.9915535720125	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTAGCATTGTGGGTAT	NA	False	NA	3	True	AATAAA	-16	NA	116562494	116566624	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_116562583_116563489_116563565_116564763_116564898_116565125_116565202_116566333
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025090	chr11	+	733	1	NIC	ENSMUSG00000020812.19	novel	865	6	NA	NA	2149	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTAGCATTGTGGGTAT	NA	False	NA	3	True	AATAAA	-16	NA	116565891	116566624	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_+_116565900_116566600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025117	chr11	-	334	1	NIC	ENSMUSG00000056962.12	novel	2072	6	NA	NA	3486	0	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	-7	True	AATAAA	-16	NA	116728591	116728257	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_116728300_116728600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025164	chr11	+	408	2	FSM	ENSMUSG00000020818.17	ENSMUST00000126661.2	382	2	-19	-7	-2	7	multi-exon	FALSE	canonical	3	62	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGCACCTCCTGTTTTTC	NA	False	NA	12	True	AATAAA	-25	NA	116744585	116745089	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_116744730_116744825
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025183	chr11	+	531	3	FSM	ENSMUSG00000086859.5	ENSMUST00000232907.2	422	3	-109	0	42	0	multi-exon	FALSE	canonical	3	17	junction_1	299	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCATTGTTCAAT	598	False	NA	20	True	AATAAA	-16	NA	116967331	116969781	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_116967588_116967933_116968029_116969601
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025213	chr11	+	1806	8	ISM	ENSMUSG00000020823.17	ENSMUST00000103026.10	2589	17	33295	-12	-6536	12	intron_retention	FALSE	canonical	3	337	junction_1	19.6302556981693	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGATATTTTTCAGAG	NA	False	NA	15	True	ATTAAA	-29	NA	117039358	117048397	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_+_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025224	chr11	+	2847	10	FSM	ENSMUSG00000059248.14	ENSMUST00000106349.2	2932	10	74	11	-9	0	multi-exon	FALSE	canonical	3	306	junction_1	107.436803129406	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	False	NA	91	True	AATAAA	-16	NA	117223244	117253139	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_117223297_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025236	chr11	+	326	2	Intergenic	novelGene_69	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGCATCTGCGCGTGAA	NA	False	NA	NA	False	AATAAA	-18	NA	117302762	117303931	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_+_117302819_117303661
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025240	chr11	-	305	2	Intergenic	novelGene_70	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGTGTGTGTGCGTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	117382824	117381504	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_-_117381657_117382671
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025264	chr11	+	1381	3	FSM	ENSMUSG00000048277.16	ENSMUST00000175737.2	785	3	-45	-551	-1	0	multi-exon	FALSE	canonical	3	9	junction_2	289.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTGTGCTGGGTGGCGC	NA	False	NA	14	True	AATAAA	-14	NA	117700492	117705109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_117700630_117703284_117703523_117704103
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025265	chr11	+	1431	4	FSM	ENSMUSG00000048277.16	ENSMUST00000120928.2	1402	4	-29	0	-1	0	multi-exon	FALSE	canonical	3	55	junction_1	286.604256772296	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTGTGCTGGGTGGCGC	NA	False	NA	14	True	AATAAA	-14	NA	117700492	117705109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_117700630_117703374_117703523_117703871_117704012_117704103
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025287	chr11	-	1090	5	NIC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	0	17	combination_of_known_splicesites	FALSE	canonical	3	49	junction_2	509.684399898604	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGGTTTCCCTAACTTG	NA	False	NA	0	True	ATTAAA	-33	NA	117716673	117706334	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_117706966_117707272_117707393_117712922_117713017_117715496_117715608_117716539
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025299	chr11	-	634	1	Genic_Genomic	ENSMUSG00000025574.14	novel	NA	NA	NA	NA	512	17	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGGTTTCCCTAACTTG	NA	False	NA	0	True	ATTAAA	-33	NA	117706968	117706334	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_117706300_117707000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025305	chr11	-	1725	4	ISM	ENSMUSG00000025574.14	ENSMUST00000026661.4	1440	7	245	5217	0	897	5prime_fragment	FALSE	canonical	3	796	junction_2	139.093094324948	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCACTGTCCTGTGGCTGC	NA	False	NA	NA	False	AAAAAG	-5	NA	117716673	117711568	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_117713017_117715496_117715608_117716426_117716459_117716539
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025369	chr11	+	386	1	Genic_Genomic	ENSMUSG00000017715.12	novel	NA	NA	NA	NA	11284	1	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTTGCTCAAGTGATG	NA	False	NA	17	True	AATAAA	-15	NA	117914452	117914838	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_+_117914500_117914800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025489	chr11	+	357	2	NNC	ENSMUSG00000078572.4	novel	781	3	NA	NA	5	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCTCTCCCAAGGACAA	NA	False	NA	16	True	TATAAA	-16	NA	119989774	119991250	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_119989881_119990999
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025510	chr11	+	187	1	Intergenic	novelGene_71	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTCCTGATCCTGTCAC	1748	False	NA	14	True	NA	NA	NA	120235699	120235886	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_+_120235700_120235900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025520	chr11	-	1574	7	NNC	ENSMUSG00000062825.16	novel	1189	7	NA	NA	-1	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	2433.92299362344	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTTTTCTGGTTTGGC	NA	False	NA	-20	True	AATAAA	-19	NA	120239322	120236514	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_120236814_120237146_120237360_120237462_120237645_120237736_120238176_120238461_120238702_120238794_120238924_120239250
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025526	chr11	-	1911	6	NNC	ENSMUSG00000062825.16	novel	1952	6	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2598.58310623309	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTTTTCTGGTTTGGC	NA	False	NA	-20	True	AATAAA	-19	NA	120239322	120236514	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_120237360_120237458_120237645_120237736_120238176_120238461_120238702_120238794_120238924_120239250
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025527	chr11	-	1911	6	NNC	ENSMUSG00000062825.16	novel	1952	6	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2662.86848342159	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTTTTCTGGTTTGGC	NA	False	NA	-20	True	AATAAA	-19	NA	120239322	120236514	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_120237360_120237462_120237645_120237736_120238176_120238461_120238702_120238790_120238924_120239250
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025530	chr11	-	1899	6	NNC	ENSMUSG00000062825.16	novel	1952	6	NA	NA	-3	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	2572.25835405388	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTTTTCTGGTTTGGC	NA	False	NA	-20	True	AATAAA	-19	NA	120239318	120236514	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_120237360_120237462_120237637_120237732_120238176_120238461_120238702_120238794_120238924_120239250
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025540	chr11	-	2191	5	NIC	ENSMUSG00000062825.16	novel	1952	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	5636	junction_3	499.114465829232	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTGTTTTTCTGGTTTGG	NA	False	NA	-21	True	AATAAA	-18	NA	120239321	120236515	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_120237360_120237462_120237645_120237736_120238702_120238794_120238924_120239250
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025569	chr11	-	877	2	FSM	ENSMUSG00000039670.3	ENSMUST00000044007.3	813	2	-8	-56	-8	56	multi-exon	FALSE	canonical	3	42	junction_1	0	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTAGGCTGGCTGTGTGT	951	False	NA	50	True	AAGAAA	-4	NA	120348902	120347375	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_120347989_120348638
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025571	chr11	-	791	2	FSM	ENSMUSG00000039670.3	ENSMUST00000137632.2	372	2	-135	-284	-3	5	multi-exon	FALSE	canonical	2	7	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGGCTTTTGTGTTGTCC	956	False	NA	-1	True	AATAAA	-23	NA	120348897	120347426	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_120347989_120348668
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025598	chr11	+	960	5	NNC	ENSMUSG00000039640.8	novel	1316	5	NA	NA	46	297	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	478.543101507064	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTCCTGAACCTTG	9001	False	NA	25	True	TATAAA	-17	NA	120375484	120379580	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_120375603_120376075_120376256_120376481_120376569_120378922_120379061_120379143
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025607	chr11	+	1987	11	FSM	ENSMUSG00000025792.10	ENSMUST00000026899.4	2023	11	36	0	-12	0	multi-exon	FALSE	canonical	3	77	junction_8	8.74356906531881	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGGGGGCTGGCAGATC	NA	False	NA	23	True	AATAAA	-37	NA	120382701	120390013	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_120382903_120385302_120385423_120385785_120385901_120385985_120386035_120386271_120386314_120387248_120387293_120387461_120387533_120387839_120387933_120388209_120388288_120388745_120388803_120388896
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025613	chr11	-	1207	5	FSM	ENSMUSG00000061111.9	ENSMUST00000034913.5	1205	5	3	-5	3	5	multi-exon	FALSE	canonical	3	334	junction_4	30.2861354418156	292	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGCAGTCTGTCAGGT	NA	False	NA	-19	True	AATAAA	-22	NA	120440550	120433708	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_120434575_120434729_120434832_120435506_120435626_120435702_120435755_120440482
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025671	chr11	-	365	1	NIC	ENSMUSG00000025134.3	novel	3527	6	NA	NA	789	5	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTGGTCCATCCTGCT	7803	False	NA	-2	True	AATAAA	-24	NA	120485694	120485329	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_120485300_120485700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025709	chr11	+	554	2	FSM	ENSMUSG00000044034.12	ENSMUST00000106195.3	542	2	-3	-9	-3	9	multi-exon	FALSE	canonical	3	9	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGCTGGAGGAGATGGC	1205	False	NA	NA	False	AATAAA	-23	NA	120499299	120499928	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_120499566_120499640
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025731	chr11	-	1705	10	FSM	ENSMUSG00000025138.15	ENSMUST00000080202.12	1727	10	22	0	0	0	multi-exon	FALSE	canonical	2	54	junction_9	11.3376897945103	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCCCGATGACTGT	NA	False	NA	-1	True	ATTAAA	-15	NA	120515818	120509197	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_120509876_120510988_120511096_120511249_120511331_120511472_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498_120515637_120515702
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025737	chr11	-	299	1	ISM	ENSMUSG00000051510.14	ENSMUST00000058162.14	4923	3	8185	0	4733	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTGGTATTTCTTTGAA	NA	False	NA	-1	True	AATAAA	-16	NA	120516241	120515942	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr11_-_120515900_120516200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025789	chr11	+	1842	16	FSM	ENSMUSG00000025142.19	ENSMUST00000026135.15	1820	16	-20	-2	-1	2	multi-exon	FALSE	canonical	3	887	junction_3	62.8477525453377	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTCTTTTCTGCAGAA	NA	False	NA	18	True	AATAAA	-22	NA	120563797	120600275	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025797	chr11	+	396	2	FSM	ENSMUSG00000025142.19	ENSMUST00000169964.2	505	2	79	30	-4	-30	multi-exon	FALSE	canonical	3	898	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCACTTTGTAGACCAGG	NA	False	NA	NA	False	NA	NA	NA	120563877	120565142	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_120563997_120564865
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025853	chr11	-	522	4	NIC	ENSMUSG00000025144.18	novel	606	5	NA	NA	-4	1	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	302.505463678849	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTTTCTCTTTGCCAT	NA	False	NA	-1	True	AATAAA	-20	NA	120604568	120601766	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr11_-_120602133_120602528_120602583_120602669_120602722_120604518
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025867	chr11	-	597	5	NNC	ENSMUSG00000025144.18	novel	606	5	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	330.531390339859	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	-2	True	AATAAA	-19	NA	120604570	120601767	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_120602118_120602215_120602305_120602528_120602583_120602669_120602722_120604518
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025873	chr11	-	551	4	NNC	ENSMUSG00000025144.18	novel	606	5	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	396.502206803443	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	-2	True	AATAAA	-19	NA	120604568	120601767	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_120602133_120602215_120602305_120602535_120602583_120604518
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025877	chr11	-	801	6	NNC	ENSMUSG00000025144.18	novel	873	6	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	399.204508992571	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	-2	True	AATAAA	-19	NA	120604570	120601767	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_120602133_120602215_120602305_120602528_120602583_120602669_120602722_120603265_120603455_120604518
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025880	chr11	-	593	4	NNC	ENSMUSG00000025144.18	novel	606	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	369.688457428083	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	-2	True	AATAAA	-19	NA	120604564	120601767	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_-_120602133_120602215_120602328_120602651_120602722_120604518
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025916	chr11	+	653	2	FSM	ENSMUSG00000025145.14	ENSMUST00000155187.2	898	2	461	-216	461	0	multi-exon	FALSE	canonical	3	52	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGTCCAGTTCCTTTCT	2520	False	NA	NA	False	GATAAA	-1	NA	120611017	120611954	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_120611160_120611443
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025940	chr11	+	1604	2	Genic_Genomic	ENSMUSG00000078249.6	novel	1626	1	NA	NA	-9	2	multi-exon	FALSE	canonical	3	1960	junction_1	0	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAAGAGTCCTGCCTCA	NA	False	NA	NA	False	NA	NA	NA	120653610	120655247	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_+_120653817_120653849
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025943	chr11	+	1637	1	FSM	ENSMUSG00000078249.6	ENSMUST00000105046.4	1626	1	-9	-2	-9	2	mono-exon	FALSE	NA	NA	NA	NA	NA	920	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAAGAGTCCTGCCTCA	NA	False	NA	NA	False	NA	NA	NA	120653610	120655247	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_120653600_120655200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000025953	chr11	-	759	1	Genic_Genomic	ENSMUSG00000025158.8	novel	NA	NA	NA	NA	2682	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTCCTCTTGTCATA	873	False	NA	-3	True	AGTAAA	-20	NA	120672329	120671570	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr11_-_120671600_120672300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026020	chr11	+	1529	3	NNC	ENSMUSG00000039329.9	novel	1745	3	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	365	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTATGTGTATGGTTT	NA	False	NA	26	True	AATAAA	-20	NA	121036978	121039145	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr11_+_121037049_121037353_121037428_121037760
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026021	chr11	+	1862	2	FSM	ENSMUSG00000039329.9	ENSMUST00000155694.2	406	2	-4	-1452	-4	0	multi-exon	FALSE	canonical	3	732	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTATGTGTATGGTTT	NA	False	NA	26	True	AATAAA	-20	NA	121036978	121039145	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_+_121037049_121037353
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026032	chr11	-	1309	9	FSM	ENSMUSG00000025169.7	ENSMUST00000026169.7	1308	9	-1	0	-1	0	multi-exon	FALSE	canonical	3	143	junction_7	19.9483708607996	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGATCTGGGCGCTGC	NA	False	NA	-7	True	AGTAAA	-41	NA	121095538	121068416	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr11_-_121068765_121074236_121074361_121085905_121086060_121087562_121087620_121088256_121088322_121090591_121090635_121091736_121091813_121093716_121093935_121095314
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026068	chr11	-	371	1	Intergenic	novelGene_72	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTGTCTCCACTTTAAA	2598	False	NA	NA	False	AATAAA	-23	NA	121545481	121545110	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_-_121545100_121545500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026073	chr11	-	2776	4	Intergenic	novelGene_73	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	134	junction_1	27.2070252365491	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGTCTTGCTTGGTTCC	NA	False	NA	0	True	NA	NA	NA	121816169	121795182	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_-_121797657_121798775_121798837_121799014_121799142_121816055
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026079	chr11	-	432	3	Intergenic	novelGene_74	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	99	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGGTGTCTGATTTATG	NA	False	NA	NA	False	NA	NA	NA	121816155	121798627	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr11_-_121798837_121799018_121799142_121816055
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026098	chr12	+	827	4	NNC	ENSMUSG00000079179.10	novel	4006	4	NA	NA	-19	1	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	68.3569065030496	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTCAGGACAAATTTG	NA	False	NA	11	True	AATAAA	-20	NA	3285484	3288274	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_+_3285930_3287346_3287413_3287590_3287661_3288028
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026111	chr12	-	3474	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	-4	43	-4	-43	multi-exon	FALSE	canonical	3	1286	junction_2	62.4422933595492	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTCTACTTCTGTTCAT	NA	False	NA	-45	True	AATAAA	-15	NA	3359973	3297470	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026137	chr12	+	1932	7	ISM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	9942	-1155	1389	450	3prime_fragment	FALSE	canonical	3	122	junction_6	9.3704618645804	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCTTTCTGTCTAAGT	NA	False	NA	9	True	AATAAA	-18	NA	3951669	3958997	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_+_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026168	chr12	+	242	1	Intergenic	novelGene_75	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGCCAACCAACTGAACA	NA	False	NA	NA	False	AATGAA	-28	NA	4351053	4351295	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr12_+_4351100_4351300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026182	chr12	-	471	3	NNC	ENSMUSG00000112819.2	novel	457	3	NA	NA	-26	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	5	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGGCTACATTT	NA	False	NA	NA	False	NA	NA	NA	4603811	4602542	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_4602731_4603013_4603176_4603690
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026232	chr12	+	488	1	NIC	ENSMUSG00000051721.7	novel	1950	3	NA	NA	-1286	4	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGGTGTGTGCCTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	4898859	4899347	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_+_4898900_4899300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026237	chr12	-	986	1	Intergenic	novelGene_76	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGTAAGACGTGGCTT	NA	False	NA	-18	True	AGTAAA	-21	NA	4927799	4926813	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr12_-_4926800_4927800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026243	chr12	-	1740	1	Genic_Genomic	ENSMUSG00000020634.13	novel	NA	NA	NA	NA	27425	932	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCAGAGTCCCTTTTAGC	NA	False	NA	-13	True	ATTAAA	-27	NA	4929839	4928099	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr12_-_4928100_4929800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026262	chr12	+	453	1	Genic_Genomic	ENSMUSG00000052812.6	novel	NA	NA	NA	NA	64896	6	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTAGCATGATTGTGA	NA	False	NA	13	True	AATAAA	-21	NA	5096947	5097400	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr12_+_5096900_5097400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026265	chr12	+	2739	7	NIC	ENSMUSG00000037669.16	novel	2737	7	NA	NA	11	1	combination_of_known_junctions	TRUE	canonical	3	188	junction_5	23.7533623350932	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTGTGGTCTGATCT	NA	False	NA	19	True	AATAAA	-19	NA	8258117	8335760	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_+_8258205_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026311	chr12	+	771	3	NNC	ENSMUSG00000066637.3	novel	1000	3	NA	NA	-5	-209	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	73	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATTCCCAACTTTGTA	NA	False	NA	19	True	AGTAAA	-21	NA	9080021	9086185	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_+_9080197_9084921_9085094_9085761
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026343	chr12	-	226	2	Intergenic	novelGene_77	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTCCTCTTTTCTTTCT	NA	False	NA	NA	False	CATAAA	-15	NA	11934596	11931075	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr12_-_11931287_11934581
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026348	chr12	+	735	1	FSM	ENSMUSG00000078377.6	ENSMUST00000105169.6	614	1	-45	-76	-45	76	mono-exon	FALSE	NA	NA	NA	NA	NA	267	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCATTATCGTTCTCTCT	NA	False	NA	NA	False	AATAAA	-43	NA	12073000	12073735	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_12073000_12073700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026376	chr12	-	333	1	NIC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	9750	-2324	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTGTCTTCTTTTAAA	NA	False	NA	-1	True	AATAAA	-24	NA	13269630	13269297	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_-_13269300_13269600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026385	chr12	+	1358	1	NIC	ENSMUSG00000057469.9	novel	2694	10	NA	NA	1244	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGCGTGCCTGTGTTTC	NA	False	NA	4	True	ATTAAA	-15	NA	16875395	16876753	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_+_16875400_16876800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026423	chr12	+	446	1	NIC	ENSMUSG00000020571.14	novel	2175	13	NA	NA	6695	-389	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGAAATTAGTAGCACA	NA	False	NA	25	True	AATAAA	-27	NA	17333936	17334382	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_+_17333900_17334400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026465	chr12	+	302	1	ISM	ENSMUSG00000071379.3	ENSMUST00000071858.5	1526	4	100772	4	63402	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTGTGAGTTTCCT	NA	False	NA	13	True	AATAAA	-1	NA	17841628	17841930	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_+_17841600_17841900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026545	chr12	-	323	2	NNC	ENSMUSG00000099759.2	novel	1735	2	NA	NA	9100	-1095	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCCTAGTTTCCCTTT	NA	False	NA	NA	False	NA	NA	NA	20856680	20855476	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_20855683_20856563
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026553	chr12	+	232	1	Intergenic	novelGene_78	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTATTTTGTTGTTGT	NA	False	NA	3	True	AATAAA	-15	NA	21068213	21068445	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr12_+_21068200_21068400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026571	chr12	+	2299	18	FSM	ENSMUSG00000054309.10	ENSMUST00000067284.10	2499	18	-16	216	-16	5	multi-exon	FALSE	canonical	3	692	junction_10	70.3324286444819	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTGTTTACTTTTGCAT	NA	False	NA	18	True	AATAAA	-22	NA	21336342	21364841	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026574	chr12	+	2254	18	NNC	ENSMUSG00000054309.10	novel	2499	18	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	203.55572764247	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGTGCCTGTTTACTTT	NA	False	NA	13	True	AATAAA	-17	NA	21336386	21364836	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351580_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026594	chr12	+	736	5	NIC	ENSMUSG00000062054.8	novel	1141	6	NA	NA	6	-212	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	191.209799696564	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGTTCATGATTATTGA	NA	False	NA	9	True	ATTAAA	-19	NA	21366420	21373608	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_+_21366514_21367376_21367430_21367898_21368048_21371334_21371457_21373289
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026603	chr12	-	1788	1	ISM	ENSMUSG00000052593.17	ENSMUST00000101551.10	4469	20	48275	22	3972	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTGGCTACCAACATG	9165	False	NA	NA	False	AATAAA	-22	NA	21375319	21373531	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_-_21373500_21375300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026607	chr12	-	2225	6	FSM	ENSMUSG00000076432.14	ENSMUST00000135088.9	2197	6	-28	0	-28	0	multi-exon	FALSE	canonical	3	2872	junction_5	274.352328220484	3791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGGCTGGTATTAGAAT	NA	False	NA	-12	True	AATAAA	-18	NA	21467666	21440071	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026628	chr12	-	1538	6	NNC	ENSMUSG00000076432.14	novel	2197	6	NA	NA	54	-344	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_5	1379.1689381653	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCGTAGCTCTGGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	21467535	21440676	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467455
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026649	chr12	+	593	5	NNC	ENSMUSG00000109975.2	novel	363	4	NA	NA	-30	10	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	67.7619915586902	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGTTTTTTTTTTTTTTTT	6070	False	NA	NA	False	ACTAAA	-28	NA	21593277	21604532	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_+_21593347_21595309_21595401_21599775_21599956_21604009_21604108_21604377
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026670	chr12	-	219	1	Intergenic	novelGene_79	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTATTTGGATGTTG	NA	False	NA	-8	True	AATAAA	-14	NA	22773520	22773301	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr12_-_22773300_22773500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026681	chr12	-	1371	1	Intergenic	novelGene_80	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTATTTGGTTGTTG	NA	False	NA	NA	False	AATAAA	-43	NA	23196508	23195137	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr12_-_23195100_23196500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026710	chr12	-	1062	1	FSM	ENSMUSG00000066553.6	ENSMUST00000140065.2	342	1	-57	-663	-57	663	mono-exon	FALSE	NA	NA	NA	NA	NA	507	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATGAAGATGTTAAAAAAA	NA	False	NA	NA	False	AATAAA	-6	NA	24689066	24688004	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_24688000_24689100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026715	chr12	+	2164	10	FSM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	-9	38	-9	-38	multi-exon	FALSE	canonical	3	5416	junction_9	442.930588436653	785	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAGTATTAAATGATTTA	NA	False	NA	34	True	AATAAA	-34	NA	24758230	24764107	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026736	chr12	+	635	1	ISM	ENSMUSG00000036333.12	ENSMUST00000066652.7	7409	32	83919	219	4852	-219	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACGGAGTTTTATTCACT	9011	False	NA	10	True	AATAAA	-20	NA	25108842	25109477	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_+_25108800_25109500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026754	chr12	-	656	7	NNC	ENSMUSG00000061477.5	novel	954	7	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	5955.34126272841	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	False	NA	-10	True	AATAAA	-16	NA	28685880	28681081	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578_28685646_28685834
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026755	chr12	-	646	7	NNC	ENSMUSG00000061477.5	novel	954	7	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	5955.34126272841	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	False	NA	-10	True	AATAAA	-16	NA	28685880	28681081	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578_28685656_28685854
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026757	chr12	-	643	7	NNC	ENSMUSG00000061477.5	novel	954	7	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	5923.523268855	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	False	NA	-10	True	AATAAA	-16	NA	28685880	28681081	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684342_28685414_28685487_28685578_28685663_28685854
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026759	chr12	-	685	7	NNC	ENSMUSG00000061477.5	novel	954	7	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	5955.34126272841	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	False	NA	-10	True	AATAAA	-16	NA	28685917	28681081	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578_28685663_28685859
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026762	chr12	-	745	6	NIC	ENSMUSG00000061477.5	novel	954	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	10789	junction_4	2678.95028695943	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	False	NA	-10	True	AATAAA	-16	NA	28685880	28681081	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685663_28685854
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026765	chr12	-	1029	6	NIC	ENSMUSG00000061477.5	novel	954	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	10789	junction_3	2301.5609138148	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	False	NA	-10	True	AATAAA	-16	NA	28685880	28681081	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_-_28681193_28681622_28681774_28683766_28684352_28685414_28685487_28685578_28685663_28685854
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026770	chr12	-	636	7	NNC	ENSMUSG00000061477.5	novel	954	7	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	5955.34126272841	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	False	NA	-10	True	AATAAA	-16	NA	28685880	28681081	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578_28685646_28685854
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026774	chr12	-	637	7	NNC	ENSMUSG00000061477.5	novel	954	7	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5717.1488717911	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	False	NA	-10	True	AATAAA	-16	NA	28685880	28681081	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685594_28685663_28685854
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026781	chr12	-	695	8	NNC	ENSMUSG00000061477.5	novel	954	7	NA	NA	-5125	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5513.68056264949	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	False	NA	-10	True	AATAAA	-16	NA	28691077	28681081	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578_28685663_28685854_28685902_28691056
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026783	chr12	-	683	8	NNC	ENSMUSG00000061477.5	novel	954	7	NA	NA	-15761	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5513.68056264949	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	False	NA	-10	True	AATAAA	-16	NA	28701713	28681081	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578_28685663_28685854_28685889_28701691
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026788	chr12	-	729	8	NNC	ENSMUSG00000061477.5	novel	954	7	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	6996.89028593913	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	False	NA	-10	True	AATAAA	-16	NA	28685880	28681081	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685127_28685204_28685414_28685487_28685578_28685663_28685854
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026792	chr12	-	691	8	NNC	ENSMUSG00000061477.5	novel	954	7	NA	NA	-20148	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5513.68056264949	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	False	NA	-10	True	AATAAA	-16	NA	28706100	28681081	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578_28685663_28685854_28685889_28706070
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026823	chr12	-	1083	6	NIC	ENSMUSG00000061477.5	novel	954	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	10789	junction_3	2653.3760381823	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	False	NA	-10	True	AATAAA	-16	NA	28685880	28681081	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_-_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578_28685663_28685854
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026844	chr12	+	597	1	NIC	ENSMUSG00000020630.10	novel	1455	8	NA	NA	5340	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACATCTAGTTTGAGTT	NA	False	NA	12	True	AATAAA	-20	NA	28708990	28709587	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_+_28709000_28709600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026852	chr12	+	1652	4	NNC	ENSMUSG00000020629.13	novel	1652	4	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	148.023271443678	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCTCTCGAGAGTTCT	NA	False	NA	15	True	NA	NA	NA	28725225	28732174	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_+_28725372_28727780_28727897_28729388_28729569_28730964
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026861	chr12	+	859	1	ISM	ENSMUSG00000020629.13	ENSMUST00000020957.13	1652	4	6086	0	3512	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCTCTCGAGAGTTCT	NA	False	NA	15	True	NA	NA	NA	28731315	28732174	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_+_28731300_28732200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026874	chr12	-	560	2	ISM	ENSMUSG00000020673.15	ENSMUST00000021005.15	3299	17	58474	2	20849	-2	3prime_fragment	FALSE	canonical	3	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTCTTTATAAGCCGT	8493	False	NA	NA	False	ATTAAA	-18	NA	30124149	30104659	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_-_30105163_30124092
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026901	chr12	-	737	1	ISM	ENSMUSG00000044573.17	ENSMUST00000062740.15	3066	6	15868	1641	2416	909	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGTCTGCCTGCTTCT	NA	False	NA	NA	False	AATACA	-14	NA	30945702	30944965	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_-_30945000_30945700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026913	chr12	-	2264	14	FSM	ENSMUSG00000020664.11	ENSMUST00000110857.5	2544	14	6	274	6	-274	multi-exon	FALSE	canonical	3	710	junction_4	70.0417457938204	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGAGTGCATACTAAGAT	NA	False	NA	1	True	AATAAA	-29	NA	31401446	31381549	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31391478_31392742_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026917	chr12	-	300	1	ISM	ENSMUSG00000020664.11	ENSMUST00000110857.5	2544	14	19592	285	9677	-285	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGGTTATTCTGAGTG	NA	False	NA	-10	True	AATAAA	-18	NA	31381860	31381560	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_-_31381600_31381900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026918	chr12	-	2247	14	NNC	ENSMUSG00000020664.11	novel	2544	14	NA	NA	16	-285	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	232.249355894929	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGGTTATTCTGAGTG	NA	False	NA	-10	True	AATAAA	-18	NA	31401436	31381560	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391372_31391478_31392742_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026932	chr12	-	1803	8	FSM	ENSMUSG00000020650.16	ENSMUST00000177962.9	6155	8	-32	4384	-9	10	multi-exon	FALSE	canonical	3	313	junction_3	46.0678293167714	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTTTTTATTCTCTAG	NA	False	NA	NA	False	TATAAA	-20	NA	31684666	31645349	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261_31684380_31684603
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026952	chr12	-	1080	5	NNC	ENSMUSG00000020650.16	novel	360	2	NA	NA	217	12803	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	182.190147922438	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTTTTTAAAATTTCAT	NA	False	NA	NA	False	AATAAA	-26	NA	31684381	31671270	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_31671843_31674113_31674250_31676724_31676876_31680791_31680893_31684261
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000026964	chr12	-	896	1	NIC	ENSMUSG00000020648.4	novel	1773	7	NA	NA	13831	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGTATGACTCGCCTGTA	NA	False	NA	-5	True	AATAAA	-17	NA	31690944	31690048	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_-_31690000_31690900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027000	chr12	+	1585	4	FSM	ENSMUSG00000020564.18	ENSMUST00000110824.9	1675	4	94	-4	0	4	multi-exon	FALSE	canonical	2	8	junction_2	2.35702260395516	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTACATTGAGTCCTT	NA	False	NA	NA	False	NA	NA	NA	33197803	33301149	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_33197915_33198431_33198501_33267710_33267816_33299849
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027023	chr12	+	1060	2	FSM	ENSMUSG00000035799.7	ENSMUST00000049089.7	1628	2	567	1	567	-1	multi-exon	FALSE	canonical	3	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTTAAAGTTTGGTCTA	NA	False	NA	NA	False	AATAAA	-24	NA	34008236	34009827	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_34008638_34009168
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027032	chr12	-	1981	6	FSM	ENSMUSG00000020577.18	ENSMUST00000020896.17	1932	6	-47	-2	-36	2	multi-exon	FALSE	canonical	3	804	junction_3	64.3913037606787	499	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGGTGTTTAAATCAAAG	NA	False	NA	-2	True	AATAAA	-22	NA	36092535	36064553	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_36065772_36070488_36070603_36071799_36071914_36072751_36072833_36073903_36074072_36092249
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027047	chr12	+	1074	1	Genic_Genomic	ENSMUSG00000036188.5	novel	NA	NA	NA	NA	28894	2	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTCATAATTCGTGT	NA	False	NA	23	True	AATAAA	-22	NA	36246218	36247292	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr12_+_36246200_36247300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027057	chr12	-	706	1	ISM	ENSMUSG00000047446.19	ENSMUST00000146905.2	3710	2	903	2530	841	1	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTAGTGTTTTGTGCTT	NA	False	NA	-6	True	AATAAA	-16	NA	40086525	40085819	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_-_40085800_40086500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027066	chr12	-	557	3	FSM	ENSMUSG00000001627.13	ENSMUST00000170119.8	574	3	208	-191	208	2	multi-exon	FALSE	canonical	3	660	junction_2	16	306	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGTAGTGAGCAGATG	NA	False	NA	-1	True	AATAAA	-23	NA	40254433	40253127	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_40253451_40253917_40254014_40254295
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027079	chr12	-	363	1	NIC	ENSMUSG00000055917.16	novel	2438	13	NA	NA	6937	-496	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCATTATCTTGGATG	NA	False	NA	NA	False	AATAAA	-32	NA	40365903	40365540	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_-_40365500_40365900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027136	chr12	+	2170	25	FSM	ENSMUSG00000020952.11	ENSMUST00000021335.7	2096	25	-68	-6	2	6	multi-exon	TRUE	canonical	3	358	junction_5	42.0133700610757	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTTGTTTGAAAAATGA	NA	False	NA	21	True	AATAAA	-21	NA	51424294	51496890	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027161	chr12	-	870	1	NIC	ENSMUSG00000020956.15	novel	1012	4	NA	NA	6732	-1393	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGTTTTTCTTAAAGCC	NA	False	NA	3	True	AATAAA	-20	NA	52046552	52045682	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_-_52045700_52046600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027165	chr12	-	1245	4	NNC	ENSMUSG00000020956.15	novel	2564	3	NA	NA	0	-1393	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_2	77.1895214535122	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGTTTTTCTTAAAGCC	NA	False	NA	3	True	AATAAA	-20	NA	52053284	52045682	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_52046657_52051079_52051154_52051661_52051732_52053157
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027199	chr12	-	1412	2	FSM	ENSMUSG00000044408.8	ENSMUST00000056228.8	1346	2	-45	-21	-45	21	multi-exon	FALSE	canonical	3	293	junction_1	0	1045	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGATCAAGTAGTTATTT	NA	False	NA	NA	False	ATTAAA	-38	NA	54703403	54692155	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_54693321_54703156
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027214	chr12	-	1077	6	FSM	ENSMUSG00000054302.16	ENSMUST00000161592.8	4186	6	-9	3118	-6	8	multi-exon	FALSE	canonical	3	353	junction_3	29.9973332148043	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTATCAACCTCTATCT	NA	False	NA	3	True	ATTAAA	-27	NA	54742675	54720242	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_54720636_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027222	chr12	-	370	1	ISM	ENSMUSG00000054302.16	ENSMUST00000161592.8	4186	6	22051	3121	21991	5	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTGGTTATCAACCTCTA	NA	False	NA	0	True	ATTAAA	-24	NA	54720615	54720245	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_-_54720200_54720600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027234	chr12	-	625	1	Intergenic	novelGene_81	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAGGTGTGTAATAGCC	2892	False	NA	3	True	NA	NA	NA	54792828	54792203	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr12_-_54792200_54792800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027237	chr12	-	1944	14	FSM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	-6	-10	-6	10	multi-exon	FALSE	canonical	3	824	junction_2	126.191832929968	530	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTTTCTTTATCTTTTT	NA	False	NA	0	True	AATAAA	-30	NA	54842494	54793123	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027271	chr12	-	884	1	ISM	ENSMUSG00000062929.9	ENSMUST00000223450.2	2726	4	1624	1482	564	5	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCCTTGTTTTCCTTGG	NA	False	NA	NA	False	AATAAA	-21	NA	54907959	54907075	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_-_54907100_54908000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027275	chr12	-	1345	4	FSM	ENSMUSG00000062929.9	ENSMUST00000223450.2	2726	4	-101	1482	-22	5	multi-exon	FALSE	canonical	3	31	junction_2	134.037308239162	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCCTTGTTTTCCTTGG	NA	False	NA	NA	False	AATAAA	-21	NA	54909684	54907075	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_54908023_54908121_54908199_54908453_54908619_54909528
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027299	chr12	-	1174	8	NIC	ENSMUSG00000062198.6	novel	1105	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_4	59.7586984531652	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGAAATGTTTTGTT	NA	False	NA	-14	True	AATAAA	-25	NA	55126897	55092460	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_-_55092729_55095671_55095763_55100085_55100193_55104026_55104138_55106159_55106364_55107839_55107979_55109772_55109895_55126765
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027341	chr12	+	1945	15	ISM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	9117	1233	-63	-1233	3prime_fragment	FALSE	canonical	3	704	junction_6	106.985431966512	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCGTTAACTTTCTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	55211005	55235125	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_+_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027398	chr12	+	514	3	NNC	ENSMUSG00000021023.15	novel	3122	7	NA	NA	73859	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	210.5	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTAGTTGGTTTTG	NA	False	NA	17	True	AATAAA	-18	NA	55423929	55429279	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_+_55424010_55426066_55426263_55429041
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027472	chr12	-	267	1	Genic_Genomic	ENSMUSG00000021025.9	novel	NA	NA	NA	NA	2137	3	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCCCGCTCGTTTGCTAT	NA	False	NA	1	True	ATTAAA	-20	NA	55536458	55536191	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr12_-_55536200_55536500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027484	chr12	+	400	1	ISM	ENSMUSG00000012076.9	ENSMUST00000059250.8	2609	10	33013	0	25145	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTAGTGTTGTGTGTTAC	NA	False	NA	2	True	AATAAA	-20	NA	55916121	55916521	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_+_55916100_55916500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027489	chr12	-	1495	9	FSM	ENSMUSG00000021028.9	ENSMUST00000021416.9	1512	9	14	3	14	-3	multi-exon	FALSE	canonical	3	215	junction_1	38.7193427113633	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCATGTCTTTTTTAC	NA	False	NA	NA	False	AATAAA	-30	NA	56392665	56375090	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_56375585_56377013_56377053_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020_56389141_56392456
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027500	chr12	-	440	1	FSM	ENSMUSG00000066491.5	ENSMUST00000149263.2	231	1	-50	-159	-50	159	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	56420658	56420218	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_56420200_56420700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027573	chr12	+	965	1	FSM	ENSMUSG00000066487.4	ENSMUST00000085368.4	882	1	-27	-56	-27	56	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTGAATCTTTAAAAAACA	NA	False	NA	NA	False	AATAAA	-33	NA	59127777	59128742	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_59127800_59128700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027575	chr12	+	1631	2	Genic_Genomic	ENSMUSG00000066487.4	novel	882	1	NA	NA	-27	12677	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTTTAATTTTTAATGTG	NA	False	NA	NA	False	NA	NA	NA	59127777	59141363	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr12_+_59128829_59140783
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027590	chr12	+	336	1	ISM	ENSMUSG00000035597.20	ENSMUST00000120580.8	4069	14	25492	1226	10714	4	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGATGAATTCATTTGG	NA	False	NA	24	True	AATAAA	-21	NA	65108598	65108934	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_+_65108600_65108900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027601	chr12	-	997	7	NNC	ENSMUSG00000020949.10	novel	1022	7	NA	NA	-20	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3855.04114764032	436	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGTGTGTTCTGTATTC	NA	False	NA	-1	True	AATAAA	-30	NA	65120760	65109196	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116729_65116827_65120588
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027605	chr12	-	830	6	NNC	ENSMUSG00000020949.10	novel	1022	7	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	4052.36617299079	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGTGTTCTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	65120721	65109197	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_65109515_65110451_65110550_65112510_65112579_65115771_65115884_65116724_65116827_65120588
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027618	chr12	-	317	1	ISM	ENSMUSG00000020949.10	ENSMUST00000220957.2	1910	6	8393	0	3702	0	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGTGTTCTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	65109514	65109197	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_-_65109200_65109500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027684	chr12	-	935	7	NNC	ENSMUSG00000020949.10	novel	1022	7	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3824.96299183259	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGACTTATTTATTGT	NA	False	NA	-14	True	AATAAA	-17	NA	65120710	65109209	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_65109515_65110451_65110550_65112510_65112571_65113411_65113552_65115775_65115884_65116724_65116827_65120588
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027685	chr12	-	958	7	NNC	ENSMUSG00000020949.10	novel	1022	7	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3803.75239073208	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGACTTATTTATTGT	NA	False	NA	-14	True	AATAAA	-17	NA	65120721	65109209	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115767_65115884_65116724_65116827_65120588
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027721	chr12	-	1083	1	FSM	ENSMUSG00000060499.8	ENSMUST00000081908.8	1023	1	-55	-5	-55	5	mono-exon	FALSE	NA	NA	NA	NA	NA	1623	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTGTTTTGCTTTA	NA	False	NA	1	True	ATTAAA	-25	NA	66331230	66330147	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_66330100_66331200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027729	chr12	-	613	2	Antisense	novelGene_ENSMUSG00000113948.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATATATTTCTATATAA	NA	False	NA	NA	False	NA	NA	NA	67558161	67557492	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr12_-_67557822_67557877
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027746	chr12	-	356	3	NNC	ENSMUSG00000034892.9	novel	390	3	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12729	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGTGTGTTTTGT	NA	False	NA	-10	True	AATAAA	-18	NA	69205936	69204495	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_69204586_69205434_69205535_69205770
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027756	chr12	-	537	2	ISM	ENSMUSG00000034892.9	ENSMUST00000037023.9	390	3	89	0	-43	0	intron_retention	FALSE	canonical	3	25878	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGTGTGTTTTGT	NA	False	NA	-10	True	AATAAA	-18	NA	69205871	69204495	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_-_69204596_69205434
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027763	chr12	-	1132	2	FSM	ENSMUSG00000034892.9	ENSMUST00000094291.3	461	2	-35	-636	-35	0	multi-exon	FALSE	canonical	3	25458	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGTGTGTTTTGT	NA	False	NA	-10	True	AATAAA	-18	NA	69205863	69204495	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_69205535_69205770
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027795	chr12	-	500	2	NNC	ENSMUSG00000049751.7	novel	526	2	NA	NA	21	-3	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_1	0	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTTTTGATTCTCA	NA	False	NA	-1	True	AATAAA	-21	NA	69230836	69229507	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_69229928_69230756
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027802	chr12	-	760	2	FSM	ENSMUSG00000049751.7	ENSMUST00000110620.2	757	2	-6	3	-6	-3	multi-exon	FALSE	canonical	3	8	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTTTTGATTCTCA	NA	False	NA	-1	True	AATAAA	-21	NA	69230766	69229507	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_69229940_69230438
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027809	chr12	-	674	2	NNC	ENSMUSG00000049751.7	novel	757	2	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_1	0	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTTTTGATTCTCA	NA	False	NA	-1	True	AATAAA	-21	NA	69230769	69229507	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_69229940_69230527
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027815	chr12	+	494	2	Antisense	novelGene_ENSMUSG00000113149.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGGAAGTCGGAACTGAAC	871	False	NA	NA	False	NA	NA	NA	69229507	69230820	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr12_+_69229942_69230760
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027875	chr12	+	993	1	Genic_Genomic	ENSMUSG00000044147.9	novel	NA	NA	NA	NA	646	5	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCGTTTGTCTTTTATAT	NA	False	NA	35	True	AGTAAA	-24	NA	69419569	69420562	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr12_+_69419600_69420600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027879	chr12	+	407	1	Intergenic	novelGene_82	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTGGTTATGTTACTT	NA	False	NA	14	True	AATAAA	-17	NA	69422347	69422754	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr12_+_69422300_69422800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000027914	chr12	+	1609	6	FSM	ENSMUSG00000054894.7	ENSMUST00000220916.2	1599	6	-5	-5	-5	5	multi-exon	FALSE	canonical	3	32	junction_1	68.5787138987018	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTAGTCTTTACTTTCTTG	NA	False	NA	9	True	AATAAA	-21	NA	69771718	69791439	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_69771789_69772228_69772329_69784724_69784836_69787672_69787882_69788418_69788591_69790492
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028105	chr12	-	192	1	ISM	ENSMUSG00000021087.19	ENSMUST00000150156.2	1428	7	23796	0	23796	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTCTCTCTGTCTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	72258717	72258525	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_-_72258500_72258700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028107	chr12	-	1522	7	FSM	ENSMUSG00000021087.19	ENSMUST00000021497.16	1544	7	23	-1	-15	0	multi-exon	FALSE	canonical	3	47	junction_2	4.27200187265877	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTCTCTCTGTCTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	72283475	72258525	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_72259352_72263544_72263604_72263688_72263736_72264192_72264263_72266030_72266170_72270105_72270314_72283302
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028182	chr12	+	1677	4	ISM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	34382	638	4616	-638	3prime_fragment	FALSE	canonical	3	468	junction_2	17.8200885394982	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGGTCAGCGCTTACG	NA	False	NA	20	True	AATAAA	-20	NA	73989059	73993666	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_+_73989160_73990852_73990962_73991684_73991812_73992325
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028199	chr12	-	425	3	NNC	ENSMUSG00000113031.2	novel	636	3	NA	NA	71	233	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCAGGCAGTCCAGTTCCC	NA	False	NA	NA	False	AATAAA	-29	NA	74363865	74360741	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_74360910_74362065_74362187_74363729
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028208	chr12	+	824	2	Antisense	novelGene_ENSMUSG00000118552.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCACTGATTTTTATACT	7511	False	NA	NA	False	NA	NA	NA	75677367	75678881	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr12_+_75677662_75678351
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028212	chr12	-	467	1	FSM	ENSMUSG00000118552.2	ENSMUST00000238938.2	348	1	-60	-59	-60	59	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGTTCTTTTAAAAAAAAA	NA	False	NA	-21	True	AATAAA	-37	NA	75678152	75677685	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_75677700_75678200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028215	chr12	+	463	1	Antisense	novelGene_ENSMUSG00000118552.2_AS_novelGene_ENSMUSG00000045690.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTTTTTTTTTTTTTTT	7831	False	NA	NA	False	NA	NA	NA	75677687	75678150	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr12_+_75677700_75678200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028223	chr12	-	748	1	FSM	ENSMUSG00000046580.11	ENSMUST00000121461.2	292	1	-128	-328	-128	328	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCATCCCAGTAGTGCA	NA	False	NA	NA	False	AATACA	-19	NA	76199529	76198781	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_76198800_76199500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028255	chr12	+	775	1	ISM	ENSMUSG00000052609.10	ENSMUST00000075249.6	5138	19	44888	0	6718	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGGCCTCCTTCC	NA	False	NA	22	True	NA	NA	NA	76625041	76625816	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_+_76625000_76625800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028316	chr12	+	778	1	ISM	ENSMUSG00000021065.17	ENSMUST00000062804.8	3358	12	236147	349	65071	0	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGAAGTTTCTGGAAT	NA	False	NA	13	True	AATAAA	-14	NA	77521985	77522763	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_+_77522000_77522800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028324	chr12	+	998	1	NIC	ENSMUSG00000047454.13	novel	3570	24	NA	NA	1128	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTGCGGCCTTGTTA	7007	False	NA	26	True	AATAAA	-29	NA	78730548	78731546	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_+_78730500_78731500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028362	chr12	+	747	1	NIC	ENSMUSG00000021116.11	novel	3405	8	NA	NA	22657	-1477	mono-exon	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAAAGCAGTGATAACTT	NA	False	NA	30	True	ATTAAA	-23	NA	78931560	78932307	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_+_78931600_78932300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028401	chr12	-	1022	6	NNC	ENSMUSG00000021124.14	novel	1490	6	NA	NA	0	71	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	289.79095914124	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTACATGTATAACATTAAT	NA	False	NA	-4	True	AATAAA	-23	NA	79219222	79203031	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79213124_79213176_79218993
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028412	chr12	-	2865	7	NNC	ENSMUSG00000066441.15	novel	3262	7	NA	NA	-97	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	44.4425346811913	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATGGGGATATTGGAAA	NA	False	NA	-16	True	AATAAA	-42	NA	79238664	79221108	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_79223025_79229426_79229617_79231897_79232108_79233187_79233293_79235254_79235411_79235758_79235882_79238499
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028424	chr12	+	883	7	NNC	ENSMUSG00000059060.16	novel	1759	8	NA	NA	-31	-181250	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	21.6365174852352	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTCCCTTTTCCTTCTT	8682	False	NA	NA	False	NA	NA	NA	79344093	79374180	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_+_79344197_79347315_79347422_79349249_79349364_79350105_79350223_79361605_79361743_79371740_79371861_79373994
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028432	chr12	+	746	4	NNC	ENSMUSG00000059060.16	novel	1858	11	NA	NA	330471	-3	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	11.3431330181157	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCGGGGTCTCCAAAGAG	NA	False	NA	4	True	AATAAA	-37	NA	79704597	79861149	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_+_79704695_79813844_79813949_79849963_79850043_79860683
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028433	chr12	+	717	4	ISM	ENSMUSG00000059060.16	ENSMUST00000218039.3	2187	11	360261	0	330471	0	3prime_fragment	FALSE	canonical	3	26	junction_3	13.2245562832516	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGGGGTCTCCAAAGAGTAA	NA	False	NA	7	True	AATAAA	-40	NA	79704597	79861152	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_+_79704695_79813844_79813949_79849963_79850043_79860715
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028441	chr12	-	891	1	Genic_Genomic	ENSMUSG00000015143.16	novel	NA	NA	NA	NA	1719	5	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTGTTCCTTTGGCT	5950	False	NA	0	True	ATTAAA	-21	NA	80215206	80214315	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr12_-_80214300_80215200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028465	chr12	-	887	5	FSM	ENSMUSG00000021131.15	ENSMUST00000166931.2	506	5	-45	-336	-29	1	multi-exon	FALSE	canonical	3	979	junction_4	3763.79924411491	2603	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTTCTTATTTATTTG	NA	False	NA	0	True	AATAAA	-32	NA	80690651	80680794	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_80681302_80684263_80684385_80687730_80687819_80689562_80689620_80690537
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028542	chr12	+	1657	8	NIC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	289	junction_7	680.802857376675	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTGTTTCTCTCAA	NA	False	NA	NA	False	AATAAA	-23	NA	80992276	80997281	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996490
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028560	chr12	+	1492	8	NNC	ENSMUSG00000021134.18	novel	1491	8	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	799.640965352193	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTGTTTCTCTCAA	NA	False	NA	NA	False	AATAAA	-23	NA	80992305	80997281	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_+_80992443_80993349_80993492_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028574	chr12	+	1493	8	NNC	ENSMUSG00000021134.18	novel	1498	8	NA	NA	0	0	intron_retention	FALSE	canonical	1	5	junction_6	767.312192005314	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	80992305	80997277	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996272_80996379_80996490
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028577	chr12	+	441	2	FSM	ENSMUSG00000021134.18	ENSMUST00000151968.2	489	2	-47	95	0	27	multi-exon	FALSE	canonical	3	1278	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTAGAGCTCTTGTGATG	NA	False	NA	NA	False	AAAACA	-4	NA	80992305	80993649	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_80992447_80993349
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028613	chr12	+	1484	8	NNC	ENSMUSG00000021134.18	novel	1491	8	NA	NA	0	0	intron_retention	FALSE	canonical	1	5	junction_6	787.405660044038	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	80992307	80997277	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_+_80992443_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996272_80996379_80996493
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028636	chr12	+	2156	9	NNC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	68	junction_5	830.705865138197	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGGTCTGTTTCTCTCA	NA	False	NA	NA	False	AATAAA	-22	NA	80992307	80997280	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80994902_80995437_80995868_80995943_80996267_80996379_80996493
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028669	chr12	+	1563	1	ISM	ENSMUSG00000021136.14	ENSMUST00000110347.9	3496	13	158044	0	158024	0	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGCCTCTTTCTTTGG	NA	False	NA	17	True	AATAAA	-19	NA	81231625	81233188	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_+_81231600_81233200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028678	chr12	-	742	5	NIC	ENSMUSG00000021139.18	novel	1043	6	NA	NA	0	-164	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	124.884696820707	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTCTCAGTGTTCCAT	NA	False	NA	-44	True	AATAAA	-21	NA	81579679	81405797	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_-_81406119_81521360_81521424_81527704_81527777_81551317_81551414_81579489
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028692	chr12	-	605	5	NNC	ENSMUSG00000091803.8	novel	685	3	NA	NA	0	-26084	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	161.874951737445	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGATTTCTCTCTTGTC	998	False	NA	NA	False	NA	NA	NA	81531884	81432025	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_81432234_81432946_81432995_81521360_81521424_81527704_81527777_81531670
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028747	chr12	-	903	7	FSM	ENSMUSG00000002679.15	ENSMUST00000161598.8	897	7	-10	4	-10	1	multi-exon	FALSE	canonical	0	0	junction_2	187.349717551606	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATCATGCCTTTCCCTTG	NA	False	NA	-6	True	AATAAA	-18	NA	81641747	81620337	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_81620735_81621298_81621327_81628574_81628684_81629406_81629490_81635756_81635849_81638027_81638188_81641713
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028827	chr12	+	1145	7	ISM	ENSMUSG00000072946.13	ENSMUST00000147363.8	1869	9	-10	1923	-1	-402	5prime_fragment	FALSE	canonical	3	204	junction_5	24.1827532666476	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGCTCAATATTTAAATC	NA	False	NA	NA	False	AATAAA	-21	NA	84332137	84354804	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028842	chr12	+	150	1	ISM	ENSMUSG00000072946.13	ENSMUST00000123614.8	3168	10	28724	1727	28543	3	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGATTCTAGTGTGAT	NA	False	NA	31	True	TTTAAA	-22	NA	84360729	84360879	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_+_84360700_84360900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028877	chr12	+	1376	1	FSM	ENSMUSG00000098134.2	ENSMUST00000183146.2	1383	1	10	-3	10	3	mono-exon	FALSE	NA	NA	NA	NA	NA	452	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTGATCTTTCTTT	NA	False	NA	13	True	AATAAA	-22	NA	84463979	84465355	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_84464000_84465400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028881	chr12	+	2198	6	FSM	ENSMUSG00000085793.4	ENSMUST00000137170.4	2270	6	75	-3	75	3	multi-exon	FALSE	canonical	3	123	junction_1	15.7810012356631	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAGGTTTTCCTTGAAG	NA	False	NA	8	True	AATAAA	-19	NA	84498270	84578350	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_84498318_84503014_84503090_84504722_84504761_84506392_84506460_84509142_84509227_84576463
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028891	chr12	-	2210	16	ISM	ENSMUSG00000021240.7	ENSMUST00000021666.6	2309	19	3215	-125	1232	5	3prime_fragment	FALSE	canonical	3	177	junction_14	24.1887025971492	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTGATTTTTTTATTTA	NA	False	NA	NA	False	AATAAA	-29	NA	84660929	84649301	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028905	chr12	-	815	1	ISM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	15940	1836	5328	94	mono-exon	FALSE	NA	NA	NA	NA	NA	591	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTTCAGTCTGTGG	NA	False	NA	-1	True	CATAAA	-20	NA	84803986	84803171	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_-_84803200_84804000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028923	chr12	-	1147	4	NNC	ENSMUSG00000021242.10	novel	3299	4	NA	NA	16	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1414.12713557005	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTTGGTTTTGTTTTTT	NA	False	NA	-26	True	ATTAAA	-18	NA	84819672	84803264	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_84803987_84807493_84807698_84812050_84812159_84819559
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028946	chr12	+	1618	2	FSM	ENSMUSG00000021241.8	ENSMUST00000223089.2	843	2	-23	-752	-9	0	multi-exon	FALSE	canonical	3	319	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTATCGTGTTTTCAAT	NA	False	NA	15	True	TATAAA	-18	NA	84820041	84821862	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_84820146_84820348
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028955	chr12	+	1496	3	ISM	ENSMUSG00000021241.8	ENSMUST00000021667.7	883	4	24	-3	-2	0	intron_retention	FALSE	canonical	3	219	junction_2	50	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTATCGTGTTTTCAAT	NA	False	NA	15	True	TATAAA	-18	NA	84820048	84821862	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_+_84820146_84820348_84820452_84820566
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000028980	chr12	+	730	8	NNC	ENSMUSG00000021243.15	novel	749	8	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	747.100954847933	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTGTCTCAATTCTTA	4652	False	NA	23	True	ATTAAA	-25	NA	85017693	85030077	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_+_85017740_85017988_85018057_85019763_85019836_85020864_85021018_85026168_85026242_85027288_85027377_85029009_85029105_85029942
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029016	chr12	+	706	3	FSM	ENSMUSG00000021244.16	ENSMUST00000166605.2	915	3	289	-80	289	3	multi-exon	FALSE	canonical	3	136	junction_1	10.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCATAGGCTGTACAGTA	573	False	NA	12	True	AATAAA	-22	NA	85111741	85117269	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_85111876_85116392_85116574_85116878
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029033	chr12	-	316	2	Antisense	novelGene_ENSMUSG00000004789.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCCTGCACCAGAGGCAA	6994	False	NA	NA	False	NA	NA	NA	85180860	85180478	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr12_-_85180498_85180563
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029041	chr12	-	135	1	ISM	ENSMUSG00000019235.10	ENSMUST00000221972.2	2881	11	15371	510	4096	-119	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTGTGTTTAAGAGCGG	5187	False	NA	-12	True	AATAAA	-17	NA	85182667	85182532	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_-_85182500_85182700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029085	chr12	-	1606	1	ISM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	38243	0	38243	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGGGCTGTGTTTGAGTA	3248	False	NA	-3	True	AATAAA	-15	NA	85347893	85346287	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_-_85346300_85347900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029115	chr12	+	388	2	Intergenic	novelGene_83	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTCTTAGCTCCATCA	NA	False	NA	NA	False	NA	NA	NA	85571432	85572156	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr12_+_85571619_85571954
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029118	chr12	+	916	1	ISM	ENSMUSG00000034271.17	ENSMUST00000177587.9	1645	4	39936	0	36741	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTCGAGTGGTGTCTG	NA	False	NA	34	True	AGTAAA	-20	NA	85685736	85686652	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_+_85685700_85686700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029152	chr12	+	918	5	ISM	ENSMUSG00000012609.20	ENSMUST00000176008.8	5482	10	-10	24373	0	1	5prime_fragment	FALSE	canonical	3	30	junction_4	10.1334840997556	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTAATATGGTACATTT	NA	False	NA	NA	False	NA	NA	NA	85871741	85892457	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029161	chr12	+	801	9	NNC	ENSMUSG00000007867.10	novel	783	9	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	64.9249566807711	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTTCCATTCTGTCC	NA	False	NA	7	True	AATAAA	-17	NA	86129347	86209233	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_+_86129415_86131867_86131961_86158384_86158450_86185566_86185600_86186825_86186870_86207922_86207996_86208225_86208302_86208760_86208829_86208951
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029169	chr12	+	703	4	ISM	ENSMUSG00000007867.10	ENSMUST00000220711.2	372	5	20992	-270	20992	0	3prime_fragment	FALSE	canonical	3	187	junction_3	12.1928941054479	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTTCCATTCTGTCC	NA	False	NA	7	True	AATAAA	-17	NA	86207713	86209233	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_+_86207996_86208225_86208302_86208760_86208824_86208951
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029175	chr12	+	335	2	ISM	ENSMUSG00000097543.2	ENSMUST00000181667.2	3160	5	-4	24868	-4	-24868	5prime_fragment	FALSE	canonical	3	16	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGCTTTGGCATTCTCTT	NA	False	NA	NA	False	AGTAAA	-18	NA	86216110	86217008	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_+_86216220_86216782
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029183	chr12	-	816	4	Antisense	novelGene_ENSMUSG00000021255.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_2	7.78888096369861	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCTCCAGGTCACTG	NA	False	NA	-20	True	ATTAAA	-17	NA	86516795	86471840	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr12_-_86472015_86476368_86476447_86508048_86508306_86516488
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029201	chr12	-	290	1	FSM	ENSMUSG00000034168.8	ENSMUST00000038422.8	4098	1	3811	-3	3811	3	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCTGAGTCAGCAAATTT	NA	False	NA	-11	True	AATAAA	-19	NA	86927761	86927471	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_86927500_86927800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029212	chr12	+	1674	9	FSM	ENSMUSG00000021033.12	ENSMUST00000063117.10	1656	9	-18	0	-18	0	multi-exon	FALSE	canonical	3	449	junction_5	40.5555175037873	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTTTGTCATGGACAA	NA	False	NA	13	True	NA	NA	NA	87194473	87211497	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029217	chr12	-	355	3	NNC	ENSMUSG00000072919.5	novel	656	5	NA	NA	8439	7395	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	22.5	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGCTTGTCTTTATGAG	NA	False	NA	NA	False	CATAAA	-18	NA	87271891	87260418	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_87260543_87270931_87271084_87271812
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029221	chr12	-	907	4	NNC	ENSMUSG00000072919.5	novel	1101	6	NA	NA	8409	18	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_2	1.69967317119759	240	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTCTCCTATTTTTTT	NA	False	NA	NA	False	TATAAA	-18	NA	87271921	87267795	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_87268219_87269818_87270042_87270931_87271084_87271812
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029320	chr12	+	366	4	NNC	ENSMUSG00000021040.16	novel	2701	4	NA	NA	-909	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	1687.64161545697	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTTTTATTTGAAATGAGG	NA	False	NA	36	True	AATAAA	-23	NA	87489756	87496694	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_+_87489835_87494333_87494393_87496062_87496171_87496573
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029338	chr12	+	352	3	NIC	ENSMUSG00000021040.16	novel	2701	4	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_1	1806.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTTTTATTTGAAATGAGG	NA	False	NA	36	True	AATAAA	-23	NA	87490673	87496694	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_+_87490797_87496062_87496171_87496573
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029353	chr12	+	389	4	NNC	ENSMUSG00000021040.16	novel	2701	4	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1761.37452639188	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACACGTTTTTATTTGAA	NA	False	NA	30	True	AATAAA	-17	NA	87490680	87496688	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_+_87490797_87494333_87494384_87496062_87496171_87496573
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029359	chr12	+	414	4	NNC	ENSMUSG00000021040.16	novel	802	3	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	1718.42764047706	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACACGTTTTTATTTGAA	NA	False	NA	30	True	AATAAA	-17	NA	87490681	87496688	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_+_87490797_87494333_87494393_87496062_87496171_87496556
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029360	chr12	+	373	4	FSM	ENSMUSG00000021040.16	ENSMUST00000077462.8	335	4	-24	-14	0	-2	multi-exon	FALSE	canonical	3	41	junction_2	1742.05708542771	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACACGTTTTTATTTGAA	NA	False	NA	30	True	AATAAA	-17	NA	87490681	87496688	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_87490797_87494333_87494369_87496062_87496171_87496573
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029388	chr12	+	1096	2	FSM	ENSMUSG00000092019.5	ENSMUST00000164838.3	1850	2	-2	756	-2	-756	multi-exon	FALSE	canonical	2	8	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTGAGTTATTTATCTT	NA	False	NA	NA	False	NA	NA	NA	87665636	87668969	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_87665828_87668064
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029399	chr12	-	1030	2	Genic_Genomic	ENSMUSG00000095799.2	novel	435	1	NA	NA	-2771	95	multi-exon	FALSE	canonical	3	16	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTGTGTCTTGTTAATGC	NA	False	NA	NA	False	AATAAA	-14	NA	88219641	88216340	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr12_-_88217181_88219451
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029404	chr12	-	1033	2	FSM	ENSMUSG00000093847.3	ENSMUST00000218054.3	1856	2	-5	828	-5	97	multi-exon	FALSE	canonical	2	4	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTCTTGTTAATGCAA	NA	False	NA	NA	False	AATAAA	-16	NA	88290801	88287719	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_88288562_88290610
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029419	chr12	-	873	1	Genic_Genomic	ENSMUSG00000061533.17	novel	NA	NA	NA	NA	30721	7	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGCGTCTGTTAAAATAC	3673	False	NA	2	True	AATAAA	-26	NA	90966131	90965258	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr12_-_90965300_90966100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029433	chr12	-	786	1	FSM	ENSMUSG00000043483.5	ENSMUST00000052882.5	636	1	11	-161	11	161	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGTTATGTTGAAACAAA	NA	False	NA	NA	False	NA	NA	NA	96889821	96889035	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_96889000_96889800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029466	chr12	+	2067	16	FSM	ENSMUSG00000021177.17	ENSMUST00000153627.8	2036	16	-27	-4	-7	4	multi-exon	FALSE	canonical	3	362	junction_1	45.8998910674089	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGGCCTGGAATGAAATT	NA	False	NA	23	True	ATTAAA	-23	NA	99850768	99921482	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029478	chr12	+	1616	11	FSM	ENSMUSG00000021178.10	ENSMUST00000021595.10	1591	11	-21	-4	-21	4	multi-exon	FALSE	canonical	3	1446	junction_1	298.758363899657	4104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAGAGTTCATTTTCTCT	3952	False	NA	16	True	NA	NA	NA	100076391	100089668	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_100076471_100078589_100078644_100079314_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100083055_100085331_100085522_100086245_100086398_100087251_100087407_100089316
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029514	chr12	+	1596	6	FSM	ENSMUSG00000001175.17	ENSMUST00000110082.11	4115	6	22	2497	22	822	multi-exon	FALSE	canonical	3	3420	junction_5	211.830687106472	2942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTTAAATGCTTTGTAAA	9187	False	NA	32	True	AATAAA	-21	NA	100165715	100173576	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029534	chr12	+	545	1	ISM	ENSMUSG00000001175.17	ENSMUST00000110082.11	4115	6	7336	2499	1368	820	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTTAAATGCTTTGTA	NA	False	NA	30	True	AATAAA	-19	NA	100173029	100173574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_+_100173000_100173600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029535	chr12	+	1437	1	Genic_Genomic	ENSMUSG00000001175.17	novel	NA	NA	NA	NA	2978	3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAACTGTGTAGGTTTT	NA	False	NA	30	True	AATAAA	-27	NA	100174639	100176076	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr12_+_100174600_100176100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029566	chr12	-	1074	11	NIC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	-21	-29	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	87.9545337091841	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTACCTTTAAAAGTCATT	NA	False	NA	NA	False	AAGAAA	-5	NA	101924428	101889368	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914305_101914533_101914699_101924392
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029590	chr12	-	117	1	NIC	ENSMUSG00000113902.2	novel	861	3	NA	NA	7715	6	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTGTGATTCTTTTA	NA	False	NA	-3	True	AATAAA	-26	NA	101934471	101934354	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_-_101934400_101934500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029635	chr12	+	811	1	NIC	ENSMUSG00000046675.8	novel	3367	2	NA	NA	834	-2155	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGCTTGCTTTAAAAATT	NA	False	NA	6	True	CATAAA	-21	NA	102710854	102711665	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_+_102710900_102711700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029663	chr12	-	535	1	NIC	ENSMUSG00000021200.15	novel	2690	10	NA	NA	13908	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCCCTGTGATTCCTG	NA	False	NA	-2	True	AATAAA	-15	NA	103287935	103287400	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_-_103287400_103287900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029717	chr12	-	1552	5	ISM	ENSMUSG00000041415.12	ENSMUST00000222115.2	2543	6	3508	-7	-2428	7	3prime_fragment	FALSE	canonical	3	284	junction_4	24.7184141886165	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGGAACTAATTTTGG	NA	False	NA	-34	True	AATAAA	-21	NA	104663253	104657694	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029722	chr12	+	600	1	Intergenic	novelGene_84	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTATTACTGTTATTT	NA	False	NA	NA	False	AATAAA	-22	NA	104718444	104719044	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr12_+_104718400_104719000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029755	chr12	-	1227	3	FSM	ENSMUSG00000041359.15	ENSMUST00000175652.2	535	3	53	-745	-3	-3	multi-exon	FALSE	canonical	3	551	junction_2	399	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCGTGCTCTTGGAATT	NA	False	NA	-5	True	AATAAA	-20	NA	105188999	105183011	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_105183961_105184481_105184552_105188791
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029756	chr12	-	1423	4	NIC	ENSMUSG00000041359.15	novel	1398	4	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	612.059002239345	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCGTGCTCTTGGAATT	NA	False	NA	-5	True	AATAAA	-20	NA	105188999	105183011	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_-_105183961_105184481_105184552_105184917_105185089_105188766
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029782	chr12	+	1683	3	FSM	ENSMUSG00000044715.8	ENSMUST00000051934.7	2720	3	-32	1069	-32	-1069	multi-exon	FALSE	canonical	3	113	junction_2	9.5	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCTGGCTCTGTTCTAGT	NA	False	NA	42	True	NA	NA	NA	105651610	105668213	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_105651718_105664976_105665236_105666896
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029805	chr12	+	1129	9	FSM	ENSMUSG00000021111.16	ENSMUST00000166735.8	1033	9	-91	-5	-28	5	multi-exon	FALSE	canonical	3	1577	junction_3	94.8235202890085	1540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTATTTCTGTGACATTT	NA	False	NA	22	True	AATAAA	-25	NA	105750924	105775973	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029807	chr12	+	1003	9	NIC	ENSMUSG00000021111.16	novel	1033	9	NA	NA	-3	5	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	572.314544197507	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTATTTCTGTGACATTT	NA	False	NA	22	True	AATAAA	-25	NA	105750949	105775973	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_+_105751073_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029834	chr12	+	186	1	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	200	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTCTTATTTCTGTGA	NA	False	NA	17	True	AATAAA	-20	NA	105775782	105775968	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_+_105775800_105776000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029835	chr12	+	3142	9	ISM	ENSMUSG00000021111.16	ENSMUST00000169938.8	4356	21	34035	-5	898	5	3prime_fragment	FALSE	canonical	3	880	junction_1	60.3819871733284	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTGGCTGGTTTCTTTTG	317	False	NA	17	True	AATAAA	-23	NA	105785036	105805208	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_+_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029846	chr12	+	1666	13	FSM	ENSMUSG00000021115.16	ENSMUST00000072040.7	1509	13	21	-178	21	-11	multi-exon	FALSE	canonical	3	439	junction_12	159.966901958568	433	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGGTCTTTTACACAAGCG	NA	False	NA	12	True	AATAAA	-18	NA	105976507	106041657	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029919	chr12	+	739	1	ISM	ENSMUSG00000021264.13	ENSMUST00000021692.9	6178	5	22921	3516	9655	1068	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCACTCAGTGACAGTG	NA	False	NA	15	True	AATAAA	-20	NA	108781819	108782558	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_+_108781800_108782600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029929	chr12	-	2822	10	FSM	ENSMUSG00000021266.17	ENSMUST00000109848.10	2831	10	9	0	9	0	multi-exon	FALSE	canonical	3	1835	junction_9	109.614475929657	380	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACTGTCTGACCAAGCA	NA	False	NA	-31	True	AATAAA	-19	NA	108860091	108825955	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029947	chr12	+	1553	4	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-5157	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	31.6262900483478	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCGTGGTCATGGTGTT	NA	False	NA	NA	False	NA	NA	NA	108981570	108994380	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_+_108981603_108990888_108991060_108992335_108992477_108993171
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029955	chr12	+	1732	8	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_4	128.442792792777	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109506881	109538160	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_+_109506983_109509582_109509733_109509909_109510626_109512312_109512426_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029956	chr12	+	1688	8	NIC	ENSMUSG00000021268.18	novel	1988	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_4	137.349249457471	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109506881	109538160	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_+_109506983_109509582_109509689_109509909_109510626_109512312_109512426_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000029965	chr12	+	178	1	Genic_Genomic	ENSMUSG00000021268.18	novel	NA	NA	NA	NA	22298	5	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGTGTGCTACTAATAC	NA	False	NA	NA	False	ACTAAA	-6	NA	109537987	109538165	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr12_+_109538000_109538200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030015	chr12	+	737	4	NNC	ENSMUSG00000017843.15	novel	4108	13	NA	NA	81928	2	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_3	456.959030500061	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTATTTTCCTATG	NA	False	NA	16	True	AATAAA	-18	NA	110534220	110538124	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_+_110534290_110535387_110535490_110537129_110537203_110537631
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030018	chr12	+	222	1	NIC	ENSMUSG00000017843.15	novel	2367	12	NA	NA	84833	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTCTTGTATAAGTACT	NA	False	NA	15	True	AATAAA	-20	NA	110537125	110537347	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_+_110537100_110537300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030040	chr12	-	3528	11	FSM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	-50	-197	-50	197	multi-exon	FALSE	canonical	3	11114	junction_7	1521.95811046165	17310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTCTGGTCATGGTATT	NA	False	NA	0	True	NA	NA	NA	110662879	110656841	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030066	chr12	-	2767	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4042.49604205125	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662743	110657461	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_110658084_110658547_110658882_110659037_110659302_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030067	chr12	-	2763	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4127.13144932409	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662743	110657461	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_110658084_110658547_110658882_110659046_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030124	chr12	+	1616	1	ISM	ENSMUSG00000037957.15	ENSMUST00000095410.8	2384	3	55421	0	-691	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTTGTAGAACTCTGAT	NA	False	NA	19	True	AATAAA	-18	NA	110759846	110761462	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_+_110759800_110761500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030166	chr12	+	912	1	ISM	ENSMUSG00000021271.6	ENSMUST00000170060.4	3723	8	18804	2	18777	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTGCTTTCTTGATGT	NA	False	NA	11	True	AGTAAA	-14	NA	110835516	110836428	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr12_+_110835500_110836400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030195	chr12	-	1878	4	NNC	ENSMUSG00000021276.11	novel	1356	3	NA	NA	0	3	intron_retention	FALSE	canonical	3	5	junction_1	206.236649399556	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTAGTTATTTCTGTCTT	3361	False	NA	0	True	AATAAA	-21	NA	110855567	110844025	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_110844549_110845130_110846249_110850323_110850493_110855499
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030198	chr12	+	534	2	Genic_Genomic	ENSMUSG00000096942.2	novel	438	1	NA	NA	-9106	54	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACCCAAGGAAAATCTAG	5127	False	NA	NA	False	AATAAA	-31	NA	110855441	110865039	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr12_+_110855449_110864512
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030210	chr12	+	783	1	FSM	ENSMUSG00000096942.2	ENSMUST00000181233.2	438	1	-276	-69	-276	69	mono-exon	FALSE	NA	NA	NA	NA	NA	15160	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGGAGGCAAAAGCCTGT	NA	False	NA	NA	False	NA	NA	NA	110864271	110865054	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_110864300_110865100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030214	chr12	-	349	2	Antisense	novelGene_ENSMUSG00000096942.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGTTGGTTTTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	110865039	110864511	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr12_-_110864717_110864895
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030218	chr12	+	577	2	Genic_Genomic	ENSMUSG00000096942.2	novel	438	1	NA	NA	-36	4060	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTGCAGGAAGTTAGGA	NA	False	NA	NA	False	NA	NA	NA	110864511	110869045	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr12_+_110865073_110869029
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030219	chr12	+	578	2	Genic_Genomic	ENSMUSG00000096942.2	novel	438	1	NA	NA	-36	4065	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGGAAGTTAGGAATGAG	NA	False	NA	NA	False	NA	NA	NA	110864511	110869050	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr12_+_110865073_110869033
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030239	chr12	+	1531	12	FSM	ENSMUSG00000021278.8	ENSMUST00000021707.8	1701	12	3	167	3	7	multi-exon	FALSE	canonical	3	12	junction_1	7.23969772438711	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTGGTCCTACTTGTAA	NA	False	NA	35	True	AATAAA	-28	NA	111237531	111242693	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_111237599_111238130_111238250_111238331_111238377_111240576_111240665_111240792_111241011_111241144_111241283_111241387_111241497_111241590_111241674_111241778_111241927_111242005_111242184_111242266_111242361_111242449
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030274	chr12	-	1479	8	FSM	ENSMUSG00000001270.10	ENSMUST00000001304.9	1472	8	0	-7	0	7	multi-exon	FALSE	canonical	3	7551	junction_6	311.265160273359	4782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGCTTCTCCTTTCCTA	NA	False	NA	-1	True	AATAAA	-28	NA	111638772	111635787	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638199_111638408_111638663
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030285	chr12	-	961	4	NNC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	745	0	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_3	3791.13882040154	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111637174	111635794	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_111636176_111636258_111636449_111636595_111636720_111636908
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030286	chr12	-	2268	5	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-17	0	intron_retention	FALSE	canonical	3	7551	junction_3	376.663643055711	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638734	111635794	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_-_111636176_111636258_111636449_111636595_111638014_111638199_111638408_111638663
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030291	chr12	-	1681	6	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-17	0	intron_retention	FALSE	canonical	3	7551	junction_4	349.982056682911	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638734	111635794	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111638014_111638199_111638408_111638663
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030294	chr12	-	1457	8	NNC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_7	2719.30351977359	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638734	111635794	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638199_111638408_111638640
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030295	chr12	-	1427	8	NNC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2750.14931691101	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638734	111635794	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637655_111637782_111637858_111638014_111638199_111638408_111638663
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030341	chr12	-	2110	2	FSM	ENSMUSG00000049792.7	ENSMUST00000054636.7	2139	2	29	0	29	0	multi-exon	FALSE	canonical	3	159	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCCCCCTGTGCTGTTC	NA	False	NA	NA	False	CATAAA	-20	NA	111679662	111675921	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_111677847_111679477
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030343	chr12	-	1928	1	NIC	ENSMUSG00000049792.7	novel	2139	2	NA	NA	1512	0	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCCCCCTGTGCTGTTC	NA	False	NA	NA	False	CATAAA	-20	NA	111677849	111675921	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_-_111675900_111677800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030346	chr12	+	1086	5	FSM	ENSMUSG00000037787.15	ENSMUST00000040519.12	1065	5	-7	-14	-7	14	multi-exon	FALSE	canonical	3	492	junction_3	10.0343161201947	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAAGCCTTCAGCTGGCT	1534	False	NA	NA	False	TTTAAA	-15	NA	111679687	111700668	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_111679853_111689045_111689244_111690773_111690838_111696455_111696547_111700100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030366	chr12	+	525	1	Genic_Genomic	ENSMUSG00000037787.15	novel	NA	NA	NA	NA	20419	9	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAGAATAAGCCTTCAGC	1493	False	NA	NA	False	TTTAAA	-10	NA	111700138	111700663	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr12_+_111700100_111700700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030376	chr12	-	2434	8	FSM	ENSMUSG00000021287.13	ENSMUST00000021715.6	2422	8	-11	-1	0	0	multi-exon	FALSE	canonical	3	57	junction_7	12.8809303758284	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACACTTGCAAATTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	111780286	111769625	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_-_111771107_111771177_111771225_111771348_111771562_111774266_111774422_111776185_111776399_111777291_111777430_111778494_111778654_111780258
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030378	chr12	+	1327	7	FSM	ENSMUSG00000021286.9	ENSMUST00000021714.9	1308	7	-12	-7	-12	7	multi-exon	FALSE	canonical	3	470	junction_5	111.029525602677	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGCCTCACTTTGTG	NA	False	NA	23	True	ATTAAA	-24	NA	111780591	111794827	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111793976_111794120_111794251
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030384	chr12	+	1306	7	NNC	ENSMUSG00000021286.9	novel	1308	7	NA	NA	6	7	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_5	264.970700686363	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGCCTCACTTTGTG	NA	False	NA	23	True	ATTAAA	-24	NA	111780609	111794827	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111793979_111794120_111794251
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030442	chr12	+	309	2	Antisense	novelGene_ENSMUSG00000021290.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATAGAAATGATAAACAT	7447	False	NA	NA	False	NA	NA	NA	111927808	111929789	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr12_+_111927995_111929666
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030445	chr12	+	319	2	Antisense	novelGene_ENSMUSG00000021290.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATAGAAATGATAAACAT	7447	False	NA	NA	False	NA	NA	NA	111927808	111929789	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr12_+_111928005_111929666
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030453	chr12	+	1804	13	FSM	ENSMUSG00000011148.15	ENSMUST00000021726.8	1777	13	-8	-19	-8	-2	multi-exon	FALSE	canonical	3	62	junction_2	10.1005362893924	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTCTTGACTTCGTCC	NA	False	NA	NA	False	AATAAA	-38	NA	112586470	112607792	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_112586745_112594734_112594838_112598687_112598751_112599128_112599180_112599502_112599570_112600577_112600686_112600813_112600896_112601034_112601162_112601864_112602020_112602827_112602953_112604618_112604717_112606045_112606196_112607391
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030468	chr12	+	546	3	FSM	ENSMUSG00000064326.14	ENSMUST00000109755.5	333	3	-99	-114	-99	2	multi-exon	FALSE	canonical	3	90	junction_1	805	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTCCCTTCCATCTGTT	7044	False	NA	23	True	AATAAA	-23	NA	112611301	112615585	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_112611519_112614258_112614416_112615413
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030469	chr12	+	738	4	NNC	ENSMUSG00000064326.14	novel	924	4	NA	NA	-99	2	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_2	795.539369791897	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTCCCTTCCATCTGTT	7044	False	NA	23	True	AATAAA	-23	NA	112611301	112615585	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr12_+_112611519_112613271_112613464_112614258_112614416_112615413
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030501	chr12	+	171	1	FSM	ENSMUSG00000064326.14	ENSMUST00000222729.2	1317	1	1143	3	1143	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCCTCCCTTCCA	NA	False	NA	17	True	AATAAA	-17	NA	112615408	112615579	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_112615400_112615600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030554	chr12	+	1204	7	FSM	ENSMUSG00000006356.11	ENSMUST00000084882.9	1439	7	242	-7	-94	7	multi-exon	FALSE	canonical	3	743	junction_5	14.1745076340121	784	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTGTGTGTGTGTGTGT	5864	False	NA	37	True	AATAAA	-30	NA	113104097	113109133	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr12_+_113104235_113107078_113107232_113107634_113107776_113107848_113107918_113108018_113108114_113108429_113108488_113108582
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030580	chr12	+	487	4	NIC	ENSMUSG00000006360.12	novel	445	5	NA	NA	-2	0	intron_retention	FALSE	canonical	3	402	junction_3	14.522013940528	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTGTTTTTGTCTGCT	NA	False	NA	15	True	AATAAA	-15	NA	113115670	113117499	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr12_+_113115774_113116900_113117133_113117237_113117285_113117394
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030688	chr13	-	562	3	ISM	ENSMUSG00000045410.19	ENSMUST00000131982.2	412	4	-49	1226	-9	-1226	5prime_fragment	FALSE	canonical	3	176	junction_2	4	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTGTGACCTATTGG	NA	False	NA	NA	False	ATTAAA	-17	NA	4659182	4652501	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_4652797_4657389_4657558_4659083
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030694	chr13	+	1917	4	FSM	ENSMUSG00000000078.8	ENSMUST00000000080.8	4225	4	27	2281	27	838	multi-exon	FALSE	canonical	3	176	junction_1	9.7410927974683	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTCTCCAATCTTGATT	NA	False	NA	NA	False	TATAAA	-18	NA	5911507	5918112	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_5911842_5914766_5915344_5916637_5916762_5917230
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030710	chr13	-	407	1	ISM	ENSMUSG00000021196.15	ENSMUST00000131648.8	2680	6	7388	1404	5517	10	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACTTGGTTTATTGTTT	9185	False	NA	-4	True	ATTAAA	-20	NA	6631614	6631207	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_6631200_6631600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030715	chr13	-	2692	22	NNC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	-1	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	288.81898857808	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACTTGGTTTATTGT	NA	False	NA	-6	True	ATTAAA	-18	NA	6698762	6631209	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685956_6686035_6698606
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030720	chr13	-	453	1	FSM	ENSMUSG00000068324.6	ENSMUST00000089635.6	330	1	-85	-38	-85	38	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCTCTTGTAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	6713015	6712562	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_6712600_6713000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030724	chr13	-	216	1	Intergenic	novelGene_85	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	3794	False	NA	NA	False	NA	NA	NA	8812208	8811992	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr13_-_8812000_8812200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030737	chr13	-	502	1	ISM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	23512	5739	4773	410	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCTAGTAACTTAATTAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	9022607	9022105	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_9022100_9022600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030753	chr13	-	727	3	ISM	ENSMUSG00000021156.18	ENSMUST00000222038.2	1591	4	1242	343	867	226	3prime_fragment	FALSE	canonical	3	114	junction_2	13.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATTTTAAAACATTTTT	NA	False	NA	NA	False	AATAAA	-28	NA	9739679	9736671	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_9737021_9739098_9739285_9739487
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030776	chr13	+	220	1	FSM	ENSMUSG00000094185.3	ENSMUST00000180224.3	480	1	323	-63	323	63	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCCACCCTAATAACAGA	NA	False	NA	NA	False	AATAAA	-43	NA	12393361	12393581	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_12393400_12393600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030780	chr13	+	158	1	NIC	ENSMUSG00000050244.10	novel	2482	17	NA	NA	4336	8	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTCTTTATCCTGAGT	NA	False	NA	13	True	AGTAAA	-27	NA	12453624	12453782	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_+_12453600_12453800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030783	chr13	-	373	1	Genic_Genomic	ENSMUSG00000057554.14	novel	NA	NA	NA	NA	8953	4	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTCTGGAATAGTTTTT	6903	False	NA	-7	True	ATTAAA	-24	NA	12454664	12454291	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr13_-_12454300_12454700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030856	chr13	-	788	3	NNC	ENSMUSG00000015672.5	novel	3013	3	NA	NA	-22	82	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	541	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTGTGTATTTCTATA	NA	False	NA	-1	True	AATAAA	-31	NA	14787634	14784875	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_14785326_14786007_14786184_14787472
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030870	chr13	-	776	3	NNC	ENSMUSG00000015672.5	novel	3013	3	NA	NA	-22	78	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	553	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTAATTTGTGTATTTC	NA	False	NA	-5	True	AATAAA	-27	NA	14787634	14784879	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_14785316_14786007_14786190_14787476
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030876	chr13	-	698	3	NNC	ENSMUSG00000015672.5	novel	3013	3	NA	NA	-22	78	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	538	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTAATTTGTGTATTTC	NA	False	NA	-5	True	AATAAA	-27	NA	14787634	14784879	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_14785326_14786007_14786190_14787564
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030893	chr13	-	775	3	NNC	ENSMUSG00000015672.5	novel	3013	3	NA	NA	-10	74	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	556.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGGATTAATTTGTGTA	NA	False	NA	-9	True	AATAAA	-23	NA	14787622	14784883	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_14785326_14786002_14786190_14787476
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030900	chr13	-	762	3	NNC	ENSMUSG00000015672.5	novel	3013	3	NA	NA	0	71	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	556.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCAATGGATTAATTTGT	NA	False	NA	-12	True	AATAAA	-20	NA	14787612	14784886	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_14785316_14785992_14786190_14787476
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030921	chr13	+	729	7	NIC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	12	-2047	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1717.477065996	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	14	True	AATAAA	-14	NA	14787836	14800174	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_+_14787901_14790596_14790674_14791321_14791455_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030922	chr13	+	837	8	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	12	-2047	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1596.10964535648	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	14	True	AATAAA	-14	NA	14787836	14800174	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_14787901_14790596_14790674_14791336_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030923	chr13	+	940	7	ISM	ENSMUSG00000015671.12	ENSMUST00000170836.4	2911	8	12	2047	12	-2047	intron_retention	FALSE	canonical	3	4380	junction_5	245.092102869286	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	14	True	AATAAA	-14	NA	14787836	14800174	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030928	chr13	+	921	9	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	12	-2047	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	2025.33527702823	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	14	True	AATAAA	-14	NA	14787836	14800174	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14795515_14795585_14798182_14798257_14799787_14799846_14799933
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030932	chr13	+	856	8	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	12	-2047	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1622.04870457086	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	14	True	AATAAA	-14	NA	14787836	14800174	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794014_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030935	chr13	+	848	8	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	12	-2047	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1644.24049832332	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	14	True	AATAAA	-14	NA	14787836	14800174	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798186_14798257_14799787_14799846_14799933
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030958	chr13	+	2017	2	FSM	ENSMUSG00000039182.7	ENSMUST00000038690.6	2914	2	7	890	7	3	multi-exon	FALSE	canonical	3	129	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGTTTTTCATTGTGTT	NA	False	NA	13	True	ATTAAA	-20	NA	14804839	14812791	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_14804950_14810884
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030982	chr13	+	465	1	FSM	ENSMUSG00000012429.10	ENSMUST00000222292.2	4316	1	1439	2412	1439	80	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGATTTTTGTGAATATG	NA	False	NA	19	True	AATAAA	-20	NA	17871456	17871921	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_17871500_17871900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000030999	chr13	-	1884	3	FSM	ENSMUSG00000075054.6	ENSMUST00000099735.6	8744	3	-10	6870	-10	635	multi-exon	FALSE	canonical	3	467	junction_2	27.5	1333	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGCTCTACATTGTATT	NA	False	NA	NA	False	ATTAAA	-16	NA	18167944	18162784	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_18164368_18166212_18166335_18167765
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031008	chr13	-	957	2	Genic_Genomic	ENSMUSG00000075053.4	novel	853	1	NA	NA	-36	433	multi-exon	FALSE	canonical	2	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGATGAATAAAAAAAATGG	NA	False	NA	NA	False	AATAAA	-31	NA	18206214	18204892	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr13_-_18205000_18205364
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031011	chr13	-	979	1	FSM	ENSMUSG00000075053.4	ENSMUST00000099736.4	853	1	-36	-90	-36	90	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAACTTTTTATTCTTC	NA	False	NA	NA	False	AATGAA	-42	NA	18206214	18205235	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_18205200_18206200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031014	chr13	+	207	1	Intergenic	novelGene_86	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCCTAAGGATGGACTCA	NA	False	NA	NA	False	AAGAAA	-2	NA	18738337	18738544	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr13_+_18738300_18738500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031037	chr13	-	1420	10	FSM	ENSMUSG00000003062.14	ENSMUST00000197565.3	1391	10	-29	0	-4	0	multi-exon	FALSE	canonical	3	23	junction_9	324.011659598163	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTGTTGTCTGTAT	NA	False	NA	0	True	AATAAA	-19	NA	19579933	19541845	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19575142_19575268_19579873
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031091	chr13	-	301	2	Intergenic	novelGene_87	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATGTTTGCACACTCAG	NA	False	NA	NA	False	AATAAA	-38	NA	21565872	21565537	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr13_-_21565631_21565664
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031104	chr13	+	1928	1	FSM	ENSMUSG00000078139.4	ENSMUST00000104942.2	1924	1	0	-4	0	4	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAATTTGAAGTAGATCA	NA	False	NA	NA	False	AAAAAG	-4	NA	21679392	21681320	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_21679400_21681300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031112	chr13	+	468	1	FSM	ENSMUSG00000071516.3	ENSMUST00000070124.5	393	1	-30	-45	-30	45	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCTCCAAAGAGACCTAA	3369	False	NA	3	True	NA	NA	NA	21900561	21901029	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_21900600_21901000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031117	chr13	+	493	1	FSM	ENSMUSG00000101355.2	ENSMUST00000188775.2	411	1	-34	-48	-34	48	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACACAAAGGTGCTGTTG	4602	False	NA	NA	False	NA	NA	NA	21901794	21902287	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_21901800_21902300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031126	chr13	+	449	1	FSM	ENSMUSG00000114279.2	ENSMUST00000224651.2	524	1	34	41	34	-41	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTCTTTGAAAAGGGCT	9055	False	NA	NA	False	NA	NA	NA	21906247	21906696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_21906200_21906700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031141	chr13	-	486	1	FSM	ENSMUSG00000101972.2	ENSMUST00000189457.2	411	1	-30	-45	-30	45	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTCACCAAAAAGCGGC	NA	False	NA	NA	False	NA	NA	NA	21967570	21967084	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_21967100_21967600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031198	chr13	-	1013	2	Genic_Genomic	ENSMUSG00002075597.1_ENSMUSG00000094777.3	novel	482	1	NA	NA	0	277	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTGCAAAGAGCAAGAGCT	NA	False	NA	NA	False	NA	NA	NA	22017677	21994604	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr13_-_21995072_22017131
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031200	chr13	+	506	2	Genic_Genomic	ENSMUSG00000094248.2	novel	480	1	NA	NA	-30	13830	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTATTTCTAGAGAATGT	NA	False	NA	NA	False	NA	NA	NA	21994604	22008944	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr13_+_21995091_22008924
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031208	chr13	-	411	1	FSM	ENSMUSG00000069305.4	ENSMUST00000102979.2	430	1	-2	21	-2	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCCAAAGGGTTGCAACA	NA	False	NA	NA	False	ACTAAA	-27	NA	22016368	22015957	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_22016000_22016400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031213	chr13	-	484	1	FSM	ENSMUSG00000094777.3	ENSMUST00000081342.7	482	1	0	-2	0	2	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTCTTTTAAAGAACTG	NA	False	NA	NA	False	AAAAAG	-21	NA	22017677	22017193	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_22017200_22017700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031227	chr13	+	459	1	NIC	ENSMUSG00000069303.8	novel	1256	2	NA	NA	0	-2464	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTTCAGCGTAAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	22017912	22018371	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_+_22017900_22018400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031232	chr13	-	594	1	ISM	ENSMUSG00000006179.10	ENSMUST00000006341.4	2155	12	6973	2	2454	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTCTCTCTGCTGTGA	NA	False	NA	NA	False	NA	NA	NA	22186938	22186344	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_22186300_22186900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031242	chr13	+	483	1	FSM	ENSMUSG00000062727.5	ENSMUST00000110455.4	476	1	-31	24	-31	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCAGTATTAGAGCTGCA	NA	False	NA	15	True	ACTAAA	-1	NA	22220008	22220491	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_22220000_22220500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031248	chr13	-	491	1	FSM	ENSMUSG00000069301.6	ENSMUST00000091741.6	485	1	-23	17	-23	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCTAACAAGGGCTTA	NA	False	NA	2	True	NA	NA	NA	22227137	22226646	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_22226600_22227100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031250	chr13	-	845	2	Genic_Genomic	ENSMUSG00000084072.2_ENSMUSG00000069301.6	novel	322	1	NA	NA	-1	-71	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATACAAAGCACTGTTG	NA	False	NA	-52	True	AATAAA	-4	NA	22267958	22226700	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr13_-_22227215_22267627
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031290	chr13	+	492	1	FSM	ENSMUSG00000099517.3	ENSMUST00000080859.8	530	1	-4	42	-4	-42	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTCCAAAAAAAGAACTGT	8929	False	NA	NA	False	TTTAAA	-22	NA	23719587	23720079	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_23719600_23720100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031298	chr13	+	776	1	FSM	ENSMUSG00000052565.8	ENSMUST00000045301.9	7425	1	1770	4879	1770	-4879	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACCTCATTCAAAAGAGCT	11	False	NA	NA	False	NA	NA	NA	23739205	23739981	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_23739200_23740000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031300	chr13	-	492	1	FSM	ENSMUSG00000069273.3	ENSMUST00000105107.2	836	1	-17	361	-17	-361	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCACCAAAGATGCTGTA	1	True	NA	NA	False	NA	NA	NA	23746560	23746068	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_23746100_23746600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031305	chr13	-	637	1	FSM	ENSMUSG00000069272.7	ENSMUST00000102969.6	704	1	58	9	58	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGATTCATAAGATTGCC	8872	False	NA	NA	False	AATAAA	-14	NA	23755336	23754699	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_23754700_23755300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031314	chr13	+	409	1	FSM	ENSMUSG00000061482.8	ENSMUST00000102968.3	1138	1	-37	766	-37	-766	mono-exon	FALSE	NA	NA	NA	NA	NA	365	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTCACTTAAAGGAGCT	1876	False	NA	5	True	NA	NA	NA	23765543	23765952	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_23765500_23766000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031327	chr13	-	382	1	FSM	ENSMUSG00000060678.6	ENSMUST00000102967.3	820	1	-7	445	-7	-445	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAGGAGTTGTTCACTT	NA	False	NA	NA	False	NA	NA	NA	23882444	23882062	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_23882100_23882400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031334	chr13	-	484	1	FSM	ENSMUSG00000069310.5	ENSMUST00000091752.5	630	1	80	66	80	-66	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGTAAAGTTGCTGTA	4712	False	NA	1	True	AAAAAG	-24	NA	23929505	23929021	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_23929000_23929500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031339	chr13	+	471	1	FSM	ENSMUSG00000075031.5	ENSMUST00000099703.5	508	1	19	18	19	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTTTCAGAAAAGAAGTT	NA	False	NA	NA	False	NA	NA	NA	23930735	23931206	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_23930700_23931200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031345	chr13	+	399	1	FSM	ENSMUSG00000069266.6	ENSMUST00000102965.4	397	1	-25	23	-25	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAATTCCTTAAAAAGCTG	6262	False	NA	NA	False	NA	NA	NA	23940970	23941369	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_23941000_23941400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031371	chr13	-	891	7	NNC	ENSMUSG00000006715.12	novel	963	7	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_6	601.932905083467	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCGTGGAGAATTAAGTGT	NA	False	NA	-8	True	AATAAA	-26	NA	24945923	24935827	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_24936214_24937330_24937442_24937640_24937724_24940582_24940719_24941578_24941657_24944142_24944201_24945884
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031406	chr13	-	1175	6	NIC	ENSMUSG00000006715.12	novel	963	7	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	1483	junction_5	85.1445829163547	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCGTGGAGAATTAAGT	NA	False	NA	-10	True	AATAAA	-24	NA	24945921	24935829	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_-_24936214_24937330_24937724_24940582_24940719_24941578_24941657_24944142_24944201_24945795
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031436	chr13	+	1148	2	FSM	ENSMUSG00000035958.4	ENSMUST00000223804.2	1136	2	-13	1	0	-1	multi-exon	FALSE	canonical	3	778	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGTAGAGATTTTCTCC	NA	False	NA	NA	False	NA	NA	NA	25015661	25016889	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_25015913_25015992
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031438	chr13	+	1871	6	NIC	ENSMUSG00000035958.4	novel	1957	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	322.122585361536	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGACTTTTTTCTTCATG	NA	False	NA	21	True	AATAAA	-21	NA	25015661	25026136	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_+_25015913_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031453	chr13	-	610	4	ISM	ENSMUSG00000021339.5	ENSMUST00000021772.4	7035	11	24908	5455	-672	678	3prime_fragment	FALSE	canonical	3	172	junction_3	13.589211407093	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTTGAGACTAAGAAGAG	NA	False	NA	-3	True	ACTAAA	-20	NA	25179454	25176920	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031456	chr13	+	613	2	ISM	ENSMUSG00000035910.16	ENSMUST00000160363.2	661	4	14959	-436	14959	436	3prime_fragment	FALSE	canonical	3	14	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGTTTCAGAGATAATTT	NA	False	NA	NA	False	AATAAA	-23	NA	25386395	25389954	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_+_25386451_25389396
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031482	chr13	-	352	1	ISM	ENSMUSG00000016477.19	ENSMUST00000102948.11	5097	7	0	79137	0	-67011	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACGTTAATATATCGTAACA	NA	False	NA	NA	False	AATAAA	-16	NA	30170046	30169694	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_30169700_30170000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031532	chr13	+	1900	7	FSM	ENSMUSG00000042842.12	ENSMUST00000110293.9	2193	7	293	0	-1	0	multi-exon	TRUE	canonical	0	0	junction_3	2.08166599946613	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTCTTCTTTTGAG	NA	False	NA	NA	False	AATAAA	-26	NA	33149484	33163050	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_33149527_33152482_33152658_33155453_33155607_33156229_33156348_33158879_33159023_33161507_33161664_33161937
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031539	chr13	-	375	1	Intergenic	novelGene_88	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTTGCTCTTTTCTGCT	NA	False	NA	0	True	NA	NA	NA	34061571	34061196	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr13_-_34061200_34061600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031570	chr13	-	522	1	ISM	ENSMUSG00000060147.16	ENSMUST00000167163.8	1654	8	17641	3	3617	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGTCTGTCTGCCTCAC	NA	False	NA	-1	True	AATAAA	-25	NA	34102425	34101903	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_34101900_34102400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031572	chr13	-	1571	7	NIC	ENSMUSG00000060147.16	novel	1504	8	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	145.701464188479	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGTCTGTCTGCCTCAC	8583	False	NA	-1	True	AATAAA	-25	NA	34119855	34101903	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119551
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031573	chr13	-	1387	7	NIC	ENSMUSG00000060147.16	novel	1504	8	NA	NA	-11	-3	combination_of_known_junctions	FALSE	canonical	3	40	junction_6	142.613697331872	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGTCTGTCTGCCTCAC	8569	False	NA	-1	True	AATAAA	-25	NA	34119869	34101903	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119749
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031574	chr13	-	1553	8	NIC	ENSMUSG00000060147.16	novel	1654	8	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	174.090991924877	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGTCTGTCTGCCTCAC	8474	False	NA	-1	True	AATAAA	-25	NA	34119964	34101903	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119551_34119778_34119904
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031594	chr13	-	1322	7	NNC	ENSMUSG00000060147.16	novel	1504	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	165.647634721685	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8477	False	NA	-7	True	AATAAA	-19	NA	34119961	34101909	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114003_34114161_34115454_34115630_34119904
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031649	chr13	-	1844	4	FSM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	-130	468	-18	-468	multi-exon	FALSE	canonical	3	472	junction_3	10.4986771653491	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTTTTCTTTCTCTTCC	NA	False	NA	5	True	CATAAA	-20	NA	34314467	34311198	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_34312515_34312854_34312966_34313228_34313338_34314159
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031672	chr13	+	196	1	NIC	ENSMUSG00000071451.11	novel	555	3	NA	NA	15013	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCATTTTACTTTGTTT	NA	False	NA	21	True	AATAAA	-21	NA	34361959	34362155	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_+_34362000_34362200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031697	chr13	-	1598	10	FSM	ENSMUSG00000021417.16	ENSMUST00000021854.14	1746	10	149	-1	0	0	multi-exon	FALSE	canonical	3	47	junction_9	45.5959170795038	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAGAATTCATGTTGG	NA	False	NA	NA	False	AATAAA	-17	NA	35178115	35161730	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177214_35177812
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031699	chr13	-	1402	10	FSM	ENSMUSG00000021417.16	ENSMUST00000110251.9	1395	10	2	-9	2	0	multi-exon	TRUE	canonical	3	29	junction_9	51.0630208542878	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAGAATTCATGTTGG	NA	False	NA	NA	False	AATAAA	-17	NA	35178113	35161730	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177204_35177996
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031736	chr13	-	1127	8	NNC	ENSMUSG00000021418.16	novel	4380	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	198.227657206639	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCTTGTTTGTTGTC	NA	False	NA	-6	True	CATAAA	-23	NA	36090342	36080686	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36086071_36087670_36087740_36088401_36088547_36090186
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031812	chr13	+	1199	9	NNC	ENSMUSG00000021431.16	novel	1785	9	NA	NA	-4	79	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	88.1585928880447	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTACACTACACACTTAGA	NA	False	NA	15	True	AATAAA	-23	NA	38388909	38411035	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395127_38400300_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031830	chr13	-	1250	1	ISM	ENSMUSG00000038982.11	ENSMUST00000035899.8	5634	5	31159	3860	31111	-3860	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATTTGAGATTTCTTT	NA	False	NA	-23	True	ATTAAA	-20	NA	38787926	38786676	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_38786700_38787900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031870	chr13	-	1601	9	FSM	ENSMUSG00000021432.16	ENSMUST00000224645.2	802	9	-25	-774	0	0	multi-exon	FALSE	canonical	3	22	junction_7	12.4473892845046	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGGTGGGAAGAACTTAC	NA	False	NA	NA	False	AATAAA	-19	NA	39144508	39116111	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39138084_39138207_39139796_39139913_39144407
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031891	chr13	-	486	2	Intergenic	novelGene_89	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTACCCGGCCTTTTT	1858	False	NA	NA	False	AATAAA	-23	NA	41034195	41013262	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr13_-_41013621_41034067
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031901	chr13	+	1195	1	ISM	ENSMUSG00000021360.17	ENSMUST00000067778.8	4038	3	42097	0	6283	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAGTGGATATTTATTT	NA	False	NA	20	True	AATAAA	-25	NA	41113173	41114368	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_+_41113200_41114400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031932	chr13	+	837	5	NIC	ENSMUSG00000021361.8	novel	914	6	NA	NA	-15	-4	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	287.730342508398	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTGGTGTCGTCTTTG	NA	False	NA	11	True	AATAAA	-18	NA	41169752	41176058	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_+_41169875_41170590_41170650_41171181_41171259_41171831_41171934_41175581
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000031961	chr13	+	373	1	NIC	ENSMUSG00000091264.4	novel	4483	2	NA	NA	22721	-3640	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGCCATTGCAGATTTCA	NA	False	NA	7	True	AATAAA	-17	NA	41426040	41426413	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_+_41426000_41426400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032004	chr13	+	1894	8	FSM	ENSMUSG00000063200.5	ENSMUST00000071926.5	1800	8	-89	-5	-89	5	multi-exon	FALSE	canonical	3	1274	junction_1	87.1250567299906	3879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATGTAATACTGTTATAA	NA	False	NA	NA	False	AATAAA	-19	NA	43551776	43556342	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_43552135_43552210_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032021	chr13	+	939	8	NNC	ENSMUSG00000063200.5	novel	1800	8	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	507.335295481022	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGTCACATTTCTTTT	NA	False	NA	29	True	TATAAA	-29	NA	43551850	43555468	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_43552135_43552210_43552272_43552986_43553046_43554068_43554091_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032028	chr13	+	939	8	NNC	ENSMUSG00000063200.5	novel	1800	8	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	2	35	junction_5	490.971465150305	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGTCACATTTCTTTT	NA	False	NA	29	True	TATAAA	-29	NA	43551853	43555468	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_43552135_43552210_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554776_43554895_43554975_43555054_43555237
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032036	chr13	+	909	7	NNC	ENSMUSG00000063200.5	novel	1800	8	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	677.361158385162	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGTCACATTTCTTTT	NA	False	NA	29	True	TATAAA	-29	NA	43551857	43555468	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_43552135_43552210_43552272_43552991_43553050_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032049	chr13	+	929	8	NNC	ENSMUSG00000063200.5	novel	1800	8	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	509.645735300713	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCACATTTCTTTTCTAG	NA	False	NA	33	True	TATAAA	-33	NA	43551861	43555472	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_43552125_43552210_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032059	chr13	+	749	7	NNC	ENSMUSG00000063200.5	novel	1800	8	NA	NA	8	-2	intron_retention	FALSE	canonical	0	0	junction_1	540.186901811668	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGTCACATTTCTTTT	NA	False	NA	29	True	TATAAA	-29	NA	43552118	43555468	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_43552272_43552991_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032063	chr13	+	721	6	NIC	ENSMUSG00000063200.5	novel	1800	8	NA	NA	12	-2	intron_retention	FALSE	canonical	1	2	junction_2	592.319305780252	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGTCACATTTCTTTT	NA	False	NA	29	True	TATAAA	-29	NA	43552122	43555468	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_+_43552272_43552986_43553046_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032087	chr13	-	585	3	Intergenic	novelGene_90	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGCTAATGTTCATATTAC	NA	False	NA	NA	False	AATAAA	-28	NA	44363598	44357026	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr13_-_44357201_44360829_44360917_44363274
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032106	chr13	+	1053	2	ISM	ENSMUSG00000038175.11	ENSMUST00000038275.11	3065	7	0	20083	0	-19106	5prime_fragment	FALSE	canonical	3	48	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTTGTTGTTTTTTTC	4395	False	NA	NA	False	ATTAAA	-14	NA	45543217	45545415	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_+_45543520_45544664
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032116	chr13	-	459	3	Intergenic	novelGene_91	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAAAGGTCTTACAAAACT	NA	False	NA	NA	False	AATAAA	-21	NA	46165976	46155183	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr13_-_46155376_46155954_46156087_46165841
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032140	chr13	+	867	2	Antisense	novelGene_ENSMUSG00000021375.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTCTGTTTGCTGTTG	NA	False	NA	NA	False	AATAAA	-21	NA	46966182	46969140	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr13_+_46966409_46968499
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032189	chr13	-	2188	4	ISM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	78825	-3	78825	3	3prime_fragment	FALSE	canonical	3	225	junction_3	32.0312347560939	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGTGTGGCTTTTAAAT	1254	False	NA	-15	True	AATAAA	-24	NA	49042668	49032691	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032199	chr13	-	346	1	Intergenic	novelGene_92	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCACGTGCCCATGTAC	NA	False	NA	NA	False	AATAAA	-20	NA	49322884	49322538	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr13_-_49322500_49322900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032236	chr13	-	1051	7	NIC	ENSMUSG00000021391.11	novel	1144	8	NA	NA	7	3	combination_of_known_splicesites	FALSE	canonical	3	20	junction_5	68.711959172573	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGCTTTGTACAGTTAAG	NA	False	NA	-1	True	AATAAA	-24	NA	49806254	49617495	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_-_49617814_49618170_49618263_49619154_49619235_49780730_49780828_49794701_49794791_49803596_49803776_49806058
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032257	chr13	+	1409	11	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	11	-7960	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	514.720594109076	25	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTTTTGGTTTTCATTT	NA	False	NA	NA	False	AATAAA	-15	NA	49835616	49857297	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49856948
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032302	chr13	+	666	4	NNC	ENSMUSG00000062248.6	novel	692	3	NA	NA	93	-5	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_2	1628.47556526546	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCACCATTGTTGAAATTA	NA	False	NA	NA	False	AATAAA	-19	NA	51799360	51804691	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_51799508_51800058_51800131_51803620_51803749_51804372
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032307	chr13	+	331	1	Genic_Genomic	ENSMUSG00000062248.6	novel	NA	NA	NA	NA	5101	3	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTGAAATTAATTTGACT	4130	False	NA	NA	False	AATAAA	-27	NA	51804368	51804699	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr13_+_51804400_51804700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032318	chr13	+	1076	4	NNC	ENSMUSG00000021453.3	novel	1071	4	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.8865931067677	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGCCTTTTTATTGAG	NA	False	NA	NA	False	AATAAA	-15	NA	52000713	52002511	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_52000869_52001387_52001488_52001591_52001806_52001904
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032361	chr13	-	517	1	ISM	ENSMUSG00000021464.16	ENSMUST00000130235.9	3730	9	175716	5	165825	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTATTATCTCTGGG	NA	False	NA	-28	True	NA	NA	NA	53263869	53263352	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_53263400_53263900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032373	chr13	-	1216	2	FSM	ENSMUSG00000021469.10	ENSMUST00000021922.10	2453	2	237	1000	237	-1000	multi-exon	FALSE	canonical	3	8	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAAAATTCAAGTTATTT	NA	False	NA	NA	False	AATAAA	-25	NA	53626873	53621919	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_53622630_53626367
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032385	chr13	+	597	3	ISM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	0	19096	0	-628	5prime_fragment	FALSE	canonical	3	779	junction_1	87.5	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGAAGATATAGGTCAG	NA	False	NA	NA	False	CATAAA	-27	NA	54225887	54243265	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_+_54225952_54239467_54239643_54242907
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032409	chr13	-	2643	9	FSM	ENSMUSG00000025871.19	ENSMUST00000026989.15	2727	9	79	5	0	0	multi-exon	FALSE	canonical	3	520	junction_7	24.8696602308918	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGTCTGTCTTGTCCA	NA	False	NA	NA	False	AATAAA	-21	NA	54713169	54699035	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54711997_54712086_54712327_54712435_54712994
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032423	chr13	-	564	1	ISM	ENSMUSG00000025869.12	ENSMUST00000026987.12	1756	5	4782	560	4668	-209	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTGTTTACTGTGC	NA	False	NA	-2	True	ATTAAA	-16	NA	54733121	54732557	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_54732600_54733100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032433	chr13	+	733	2	FSM	ENSMUSG00000025868.7	ENSMUST00000026986.7	648	2	-69	-16	-69	16	multi-exon	FALSE	canonical	3	1416	junction_1	0	7168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTACGATCAAAACCATG	5909	False	NA	39	True	AATAAA	-43	NA	54737950	54738987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_54738233_54738536
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032463	chr13	+	1113	2	NNC	ENSMUSG00000025873.17	novel	371	3	NA	NA	-6	10341	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTTATTTATTATA	NA	False	NA	NA	False	NA	NA	NA	54769630	54822217	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_54770683_54822156
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032477	chr13	-	1431	7	NNC	ENSMUSG00000034891.14	novel	1351	6	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	40.8510165792181	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCGCCGCCTAGGCAGG	NA	False	NA	-1	True	AATAAA	-16	NA	54914374	54906672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_54907355_54907680_54907767_54910451_54910575_54910734_54910774_54913375_54913506_54913637_54913752_54914117
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032502	chr13	+	1161	5	ISM	ENSMUSG00000025875.15	ENSMUST00000145574.2	718	7	244	0	244	0	intron_retention	FALSE	canonical	3	389	junction_4	10.7092249953019	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTTTATGTTCACCG	NA	False	NA	17	True	AATAAA	-18	NA	54940927	54944588	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_+_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032508	chr13	+	495	2	FSM	ENSMUSG00000085896.3	ENSMUST00000154615.3	487	2	-8	0	-8	0	multi-exon	FALSE	canonical	1	1	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGGTGAGAGTCAACTT	NA	False	NA	NA	False	AATAAA	-23	NA	55061039	55062292	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_55061126_55061883
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032522	chr13	-	633	4	FSM	ENSMUSG00000025878.17	ENSMUST00000133187.2	2735	4	-18	2120	-17	201	multi-exon	FALSE	canonical	3	148	junction_3	8.65383665716478	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGATTAATCTGGGT	NA	False	NA	NA	False	AATAAA	-31	NA	55248130	55225068	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_55225341_55233422_55233508_55240939_55241095_55248009
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032531	chr13	+	639	1	FSM	ENSMUSG00000094446.2	ENSMUST00000075962.9	483	1	-25	-131	-25	131	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATAATTTTTCTATTTCT	NA	False	NA	NA	False	AATAAA	-31	NA	55233564	55234203	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_55233600_55234200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032542	chr13	+	909	6	NNC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_5	104.903002816888	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTTGTCTTTTTTTTC	NA	False	NA	NA	False	AATACA	-15	NA	55357594	55388660	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_55357689_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55388358
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032554	chr13	+	869	6	FSM	ENSMUSG00000021488.9	ENSMUST00000224693.2	852	6	-15	-2	-10	2	multi-exon	FALSE	canonical	3	16	junction_1	114.325150338847	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTCTTTTTTTTCCC	NA	False	NA	NA	False	AATACA	-17	NA	55359872	55388662	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_55359921_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55388354
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032580	chr13	-	552	3	NNC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	-174	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	313	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTGTGCACTGGGTG	7677	False	NA	-22	True	AATAAA	-14	NA	55468523	55467697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_55467979_55468124_55468188_55468315
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032597	chr13	+	1071	5	NNC	ENSMUSG00000021486.8	novel	2644	5	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	589.082549393546	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGGAGTCAGATAGCTT	5563	False	NA	18	True	NA	NA	NA	55469841	55473085	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_55470095_55470665_55470892_55472187_55472258_55472339_55472419_55472642
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032598	chr13	+	1109	5	NNC	ENSMUSG00000021486.8	novel	2644	5	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	586.533247139495	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGGAGTCAGATAGCTT	5563	False	NA	18	True	NA	NA	NA	55469841	55473085	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_55470095_55470665_55470892_55472143_55472252_55472339_55472419_55472642
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032607	chr13	+	1119	5	NNC	ENSMUSG00000021486.8	novel	2644	5	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	589.272591845234	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGGAGTCAGATAGCTT	5563	False	NA	18	True	NA	NA	NA	55469841	55473085	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_55470099_55470665_55470892_55472143_55472258_55472339_55472419_55472642
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032611	chr13	+	992	6	NNC	ENSMUSG00000021486.8	novel	2644	5	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	539.270395998149	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGGAGTCAGATAGCTT	5565	False	NA	18	True	NA	NA	NA	55469843	55473085	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_55470095_55470665_55470892_55472143_55472258_55472339_55472419_55472642_55472811_55472931
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032638	chr13	+	418	1	Genic_Genomic	ENSMUSG00000021486.8	novel	NA	NA	NA	NA	2837	1	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGAGTCAGATAGCTTT	374	False	NA	19	True	NA	NA	NA	55472668	55473086	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr13_+_55472700_55473100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032656	chr13	-	255	1	ISM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	15789	2907	1662	-147	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTGCCCAGCTGAGACA	NA	False	NA	-1	True	ATTAAA	-19	NA	55494807	55494552	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_55494600_55494800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032705	chr13	+	1435	5	NNC	ENSMUSG00000058569.9	novel	1420	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	286.260370991166	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCGTGGTTACTCTTTT	NA	False	NA	NA	False	NA	NA	NA	55740970	55745510	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_55741171_55741313_55741415_55742517_55742644_55743280_55743432_55744653
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032718	chr13	+	1378	4	NNC	ENSMUSG00000021501.5	novel	1382	4	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.4916323558806	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAGAAGTCTGTACATTT	NA	False	NA	NA	False	AATAAA	-22	NA	55770819	55780225	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_55771070_55772526_55772985_55776389_55776456_55779621
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032738	chr13	+	1886	1	ISM	ENSMUSG00000045767.10	ENSMUST00000057844.10	4652	2	8491	0	8491	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTACTACTTTATTTT	NA	False	NA	19	True	AATAAA	-19	NA	55849427	55851313	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_+_55849400_55851300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032744	chr13	+	1494	5	NNC	ENSMUSG00000021497.11	novel	1527	5	NA	NA	33	6	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	106.534912118047	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTCGCTTGTTTCTGG	NA	False	NA	24	True	AATAAA	-20	NA	55862495	55874046	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_55862658_55865610_55866081_55869391_55869556_55872320_55872452_55873479
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032752	chr13	+	571	1	Genic_Genomic	ENSMUSG00000021497.11	novel	NA	NA	NA	NA	7825	7	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTCGCTTGTTTCTGGG	NA	False	NA	25	True	AATAAA	-21	NA	55873476	55874047	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr13_+_55873500_55874000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032766	chr13	-	778	1	Genic_Genomic	ENSMUSG00000015937.16	novel	NA	NA	NA	NA	10126	1	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTGTTTTGTGTTACT	NA	False	NA	-4	True	AGTAAA	-19	NA	56222208	56221430	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr13_-_56221400_56222200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032788	chr13	+	2713	17	FSM	ENSMUSG00000035493.11	ENSMUST00000045173.10	2714	17	0	1	0	-1	multi-exon	FALSE	canonical	3	51	junction_1	6.48917367620871	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTGCTAGCTGCGT	9425	False	NA	NA	False	AATAAA	-15	NA	56757398	56787170	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_56757594_56762052_56762152_56771372_56771438_56773012_56773174_56773462_56773628_56773846_56773994_56775726_56775869_56777430_56777644_56778356_56778495_56779042_56779189_56779862_56780000_56780671_56780803_56783378_56783504_56784378_56784482_56784950_56785031_56785833_56785859_56786529
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032922	chr13	-	883	3	Antisense	novelGene_ENSMUSG00000055254.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	1	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGGTGCACAATTTAAAAAAA	NA	False	NA	NA	False	ATTAAA	-2	NA	59059827	59056455	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr13_-_59056897_59058134_59058480_59059730
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032928	chr13	-	917	2	Antisense	novelGene_ENSMUSG00000055254.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGGGTTTTTTTTTATC	NA	False	NA	NA	False	ATTAAA	-16	NA	59059831	59057663	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr13_-_59058480_59059730
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032938	chr13	+	932	5	ISM	ENSMUSG00000021555.16	ENSMUST00000166923.9	779	10	-38	8539	-38	15	5prime_fragment	FALSE	canonical	3	670	junction_1	98.3234458305851	421	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTCATTTTTTTGTAAG	1271	False	NA	NA	False	NA	NA	NA	59733169	59748092	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000032965	chr13	-	1480	1	ISM	ENSMUSG00000021556.13	ENSMUST00000022039.7	3954	10	39336	370	39297	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-22	NA	59784289	59782809	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_59782800_59784300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033047	chr13	+	2341	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222324.2	886	4	-30	-1425	-8	1355	multi-exon	FALSE	canonical	3	481	junction_1	27.9801516952444	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTCTATCCATGTAAA	NA	False	NA	8	True	AATAAA	-20	NA	62245553	62261216	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259162
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033054	chr13	+	1566	5	NNC	ENSMUSG00000113566.2	novel	886	4	NA	NA	-5	289	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_2	230.419590095981	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTAATGGTGTC	NA	False	NA	7	True	NA	NA	NA	62245556	62260150	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_62245653_62250218_62250513_62254561_62254689_62254881_62254943_62259162
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033065	chr13	+	990	1	Genic_Genomic	ENSMUSG00000113566.2	novel	NA	NA	NA	NA	907	289	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTAATGGTGTC	NA	False	NA	7	True	NA	NA	NA	62259160	62260150	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr13_+_62259200_62260200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033071	chr13	+	3092	4	FSM	ENSMUSG00000074867.5	ENSMUST00000099449.4	2571	4	-2	-519	-2	519	multi-exon	FALSE	canonical	3	81	junction_1	97.7422915403335	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTGGACCAGTCG	NA	False	NA	NA	False	NA	NA	NA	62277727	62321752	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_62277843_62317255_62317383_62317567_62317629_62318963
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033112	chr13	-	150	1	Genic_Genomic	ENSMUSG00000094942.8	novel	NA	NA	NA	NA	3464	5	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGATCAGTCGTTTTT	NA	False	NA	-7	True	NA	NA	NA	62516286	62516136	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr13_-_62516100_62516300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033142	chr13	-	2030	4	FSM	ENSMUSG00000113450.2	ENSMUST00000221747.2	2492	4	7	455	7	1	multi-exon	FALSE	canonical	3	15	junction_1	11.5566238822398	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGCATATCACAGTTAT	9519	False	NA	-3	True	NA	NA	NA	62614639	62601284	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_62603008_62604500_62604562_62604746_62604874_62614520
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033145	chr13	-	484	1	ISM	ENSMUSG00000074865.12	ENSMUST00000222429.2	1653	4	71476	2	33320	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGTGCATATTTGTGT	NA	False	NA	-10	True	ATTAAA	-38	NA	62634945	62634461	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_62634500_62634900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033152	chr13	-	264	1	ISM	ENSMUSG00000074865.12	ENSMUST00000222746.2	2206	3	41571	0	3393	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGTGTGGACCAGTCA	NA	False	NA	NA	False	NA	NA	NA	62664872	62664608	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_62664600_62664900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033178	chr13	-	708	1	ISM	ENSMUSG00000074863.6	ENSMUST00000221996.2	2458	4	12454	0	12427	0	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGTTCCTGGGAAAAAAC	NA	False	NA	1	True	AATAAA	-20	NA	62820305	62819597	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_62819600_62820300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033199	chr13	-	244	1	ISM	ENSMUSG00000021456.9	ENSMUST00000021907.9	1354	7	21302	0	19189	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTTATGGGTCTTCTG	NA	False	NA	2	True	AATAAA	-20	NA	62984934	62984690	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_62984700_62984900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033201	chr13	-	1357	7	FSM	ENSMUSG00000021456.9	ENSMUST00000021907.9	1354	7	-3	0	-3	0	multi-exon	FALSE	canonical	3	121	junction_2	7.5	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTTATGGGTCTTCTG	NA	False	NA	2	True	AATAAA	-20	NA	63006239	62984690	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_62985095_62988084_62988205_62989599_62989738_62997190_62997332_63001787_63001881_63002717_63002881_63005941
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033231	chr13	+	827	3	NIC	ENSMUSG00000021458.18	novel	688	4	NA	NA	-17	0	intron_retention	FALSE	canonical	2	2	junction_2	7.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAGTTAGTCTCACTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	63420612	63442985	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_+_63421164_63429955_63430073_63442826
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033284	chr13	-	415	1	NIC	ENSMUSG00000021477.10	novel	6168	9	NA	NA	2852	-575	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGTGTAATGTGTTG	NA	False	NA	1	True	AATAAA	-29	NA	64512017	64511602	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_-_64511600_64512000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033290	chr13	-	1380	8	NNC	ENSMUSG00000021477.10	novel	1971	8	NA	NA	-1	-582	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	463.663275074769	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGACTTCAGTGTGTAA	NA	False	NA	-6	True	AATAAA	-22	NA	64518121	64511609	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516851_64516979_64518049
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033297	chr13	-	1382	8	NNC	ENSMUSG00000021477.10	novel	1971	8	NA	NA	-1	-582	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	478.439342113117	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGACTTCAGTGTGTAA	NA	False	NA	-6	True	AATAAA	-22	NA	64518121	64511609	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515937_64516053_64516841_64516979_64518049
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033301	chr13	-	1221	8	NIC	ENSMUSG00000021477.10	novel	1971	8	NA	NA	0	-582	combination_of_known_junctions	FALSE	canonical	1	12	junction_4	471.034727260862	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGACTTCAGTGTGTAA	NA	False	NA	-6	True	AATAAA	-22	NA	64518120	64511609	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514739_64515673_64515821_64515929_64516053_64516841_64516979_64518049
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033372	chr13	-	160	1	Intergenic	novelGene_93	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTTCTCTGGAGTTATTG	NA	False	NA	2	True	NA	NA	NA	65623739	65623579	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr13_-_65623600_65623700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033374	chr13	-	480	4	Genic_Genomic	ENSMUSG00000114031.2	novel	908	1	NA	NA	-5569	-880	multi-exon	FALSE	canonical	3	21	junction_1	83.8821925215491	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATGTGGTAAAGCCTTT	NA	False	NA	NA	False	NA	NA	NA	65632675	65627078	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr13_-_65627120_65628564_65628768_65628968_65629055_65632525
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033426	chr13	-	655	4	NNC	ENSMUSG00000113135.2	novel	478	3	NA	NA	-23	17521	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.194275948266	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAATATATGTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	65768080	65746116	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_65746333_65763699_65763903_65764103_65764190_65767930
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033440	chr13	-	496	3	Antisense	novelGene_ENSMUSG00000055763.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	7	junction_1	7.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGCCTTCGTTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66175257	65775222	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr13_-_65775395_66167716_66167892_66175108
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033467	chr13	-	705	4	NNC	ENSMUSG00000113260.2	novel	1038	6	NA	NA	-104198	43977	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.5193489244852	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGAAAATTATGGATCAG	NA	False	NA	NA	False	NA	NA	NA	65965466	65793449	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_65793871_65840427_65840489_65912752_65912880_65965370
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033469	chr13	-	705	4	NNC	ENSMUSG00000113260.2	novel	1038	6	NA	NA	-99592	43977	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.7480157480236	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGAAAATTATGGATCAG	NA	False	NA	NA	False	NA	NA	NA	65960860	65793449	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_65793871_65840427_65840489_65912752_65912880_65960764
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033482	chr13	-	663	4	NNC	ENSMUSG00000113260.2	novel	1038	6	NA	NA	-99592	29692	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	13.1233464566864	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTCTACATTATATCAAA	NA	False	NA	NA	False	NA	NA	NA	65960860	65807734	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_65808114_65840427_65840489_65912752_65912880_65960764
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033556	chr13	+	463	4	Intergenic	novelGene_94	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	27.3130005674953	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCCTTGGTCATGAAATC	NA	False	NA	NA	False	NA	NA	NA	66098393	66111489	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr13_+_66098504_66103844_66103972_66104163_66104225_66111324
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033614	chr13	+	3169	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-40	1321	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	91.7234293951115	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66261253	66271971	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269602_66269686
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033619	chr13	+	770	3	Fusion	ENSMUSG00000095909.3_ENSMUSG00000113156.2	novel	306	2	NA	NA	-39	433	multi-exon	FALSE	canonical	0	0	junction_1	9.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATAGCCCCCGATGCCCT	NA	False	NA	NA	False	NA	NA	NA	66261254	66326347	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr13_+_66261375_66325249_66325393_66325840
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033641	chr13	-	666	5	Fusion	ENSMUSG00000118666.1_ENSMUSG00000094499.4	novel	3029	10	NA	NA	-13	134853	multi-exon	FALSE	canonical	2	6	junction_2	17.7552809045647	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTGGTTGTTGTTCAAA	NA	False	NA	NA	False	NA	NA	NA	66549945	66294096	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr13_-_66294311_66417784_66417928_66431569_66431631_66431830_66431958_66549824
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033647	chr13	-	387	2	Antisense	novelGene_ENSMUSG00000113253.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAGACAGAAATGATTC	NA	False	NA	NA	False	NA	NA	NA	66418048	66294636	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr13_-_66294756_66417780
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033662	chr13	-	1415	4	Genic_Genomic	ENSMUSG00000091347.3	novel	255	1	NA	NA	-16546	242	multi-exon	FALSE	canonical	3	41	junction_2	29.4542960458327	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATAGTGGAGAGAAATCT	9941	False	NA	NA	False	NA	NA	NA	66391933	66374890	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr13_-_66375998_66384209_66384271_66384471_66384599_66391813
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033753	chr13	-	1630	5	NNC	ENSMUSG00000094499.4	novel	3029	10	NA	NA	-2	-17302	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	9.82344135219425	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAAATAAAGTTTCTTC	NA	False	NA	NA	False	AATAAA	-24	NA	66549934	66516514	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_66517022_66518268_66518952_66519399_66519543_66528836_66529024_66549824
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033764	chr13	-	680	6	Fusion	ENSMUSG00000074832.12_ENSMUSG00000094499.4	novel	515	5	NA	NA	-11	-19628	multi-exon	FALSE	canonical	0	0	junction_2	80.1513568194575	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCAGTGTCTATTGTTC	NA	False	NA	NA	False	NA	NA	NA	66589190	66518840	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr13_-_66518952_66519399_66519543_66574426_66574555_66581478_66581540_66581739_66581867_66589080
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033779	chr13	-	463	4	NNC	ENSMUSG00000074832.12	novel	515	5	NA	NA	-11	3561	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.3097132110718	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCCTTGGTCATGAAATG	NA	False	NA	1	True	NA	NA	NA	66589190	66574389	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_66574555_66581478_66581540_66581739_66581867_66589080
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033795	chr13	-	2820	4	FSM	ENSMUSG00000074832.12	ENSMUST00000172579.4	2587	4	-61	-172	-21	172	multi-exon	FALSE	canonical	3	86	junction_1	43.8254111979188	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	0	True	NA	NA	NA	66589200	66577778	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_66580291_66581478_66581540_66581739_66581867_66589080
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033801	chr13	-	692	4	NNC	ENSMUSG00000074832.12	novel	2587	4	NA	NA	-7	-3261	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	65.6573597465577	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCTGTATAGTCTCATAA	NA	False	NA	NA	False	NA	NA	NA	66589186	66581211	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_66581540_66581739_66581867_66585171_66585303_66589080
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033803	chr13	-	620	4	NNC	ENSMUSG00000074832.12	novel	2587	4	NA	NA	-7	-3261	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	65.1067499487487	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCTGTATAGTCTCATAA	NA	False	NA	NA	False	NA	NA	NA	66589186	66581211	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_66581540_66581739_66581795_66585171_66585303_66589080
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033841	chr13	-	1028	3	NIC	ENSMUSG00000097483.3	novel	1519	4	NA	NA	28	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	31.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGAACTGTTTTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	66667559	66651222	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_-_66652035_66652807_66652875_66667410
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033845	chr13	+	1249	3	NNC	ENSMUSG00000114777.2	novel	1568	3	NA	NA	-6339	-2034	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	19.5	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTTTTATATATATATAT	NA	False	NA	NA	False	NA	NA	NA	66667703	66675374	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_66667826_66674049_66674177_66674374
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033862	chr13	+	507	4	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9047	727	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_3	16.3299316185545	851	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCTCCATTATTTCTCT	5498	False	NA	17	True	NA	NA	NA	66711937	66724702	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66724529
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033875	chr13	+	785	4	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9011	43852	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	50.1663898109747	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTTTGCTGCGTTCTT	5534	False	NA	NA	False	NA	NA	NA	66711973	66767827	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66767340
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033876	chr13	+	566	3	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9011	-2338	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_2	10	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGTATAGTCTCATAATA	5534	False	NA	NA	False	NA	NA	NA	66711973	66721637	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_66712084_66720982_66721110_66721308
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033893	chr13	+	591	5	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9009	721	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	41.8531659495432	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	5536	False	NA	11	True	NA	NA	NA	66711975	66724696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_66712084_66717560_66717689_66720982_66721110_66721308_66721370_66724529
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033894	chr13	+	391	4	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9009	721	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	39.5080863734108	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	5536	False	NA	11	True	NA	NA	NA	66711975	66724696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_66712084_66721054_66721110_66721308_66721370_66724529
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033909	chr13	+	1859	3	Intergenic	novelGene_95	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	91	junction_1	59	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCTGGCTATCATTGC	NA	False	NA	NA	False	NA	NA	NA	66773917	66784460	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr13_+_66774068_66782550_66782678_66782878
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033916	chr13	-	683	5	NNC	ENSMUSG00000074830.5	novel	1562	3	NA	NA	-7486	29756	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	91.8187753131134	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCGGTTTTTCAAGGCAT	NA	False	NA	NA	False	AATAAA	-34	NA	66828879	66788235	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_66788478_66791808_66791952_66821007_66821069_66821267_66821395_66828769
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033920	chr13	-	960	5	NNC	ENSMUSG00000074830.5	novel	1562	3	NA	NA	-7486	29550	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	86.4566365295343	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTACAGTGGCCACAGG	NA	False	NA	NA	False	AATAAA	-22	NA	66828879	66788441	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_66788961_66791808_66791952_66821007_66821069_66821267_66821395_66828769
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033938	chr13	-	3074	4	NNC	ENSMUSG00000074830.5	novel	894	4	NA	NA	-7490	1309	at_least_one_novel_splicesite	FALSE	canonical	3	150	junction_1	38.262252939418	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	1	True	NA	NA	NA	66828883	66816682	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_66819455_66821007_66821069_66821267_66821395_66828769
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033970	chr13	+	655	2	NNC	ENSMUSG00000114327.2	novel	818	2	NA	NA	25449	-125	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTCGTCTGTTCATGAT	NA	False	NA	NA	False	NA	NA	NA	66854466	66856896	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_66854613_66856387
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033973	chr13	-	481	4	NNC	ENSMUSG00000114839.2	novel	1153	3	NA	NA	-3588	-923	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	79.79974937304	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATGTGGTAAAGCCTTT	NA	False	NA	NA	False	NA	NA	NA	66892965	66887357	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_66887399_66888839_66889043_66889243_66889330_66892814
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033992	chr13	-	447	4	NNC	ENSMUSG00000114353.2	novel	464	4	NA	NA	0	4180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.4644876010491	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCCTTGGTCATGGAA	NA	False	NA	NA	False	NA	NA	NA	66950624	66935953	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_66936117_66942701_66942763_66942962_66943090_66950528
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033994	chr13	-	571	5	NNC	ENSMUSG00000114353.2	novel	464	4	NA	NA	0	884	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.8762661023719	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	1	True	NA	NA	NA	66950624	66939249	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_66939415_66941473_66941596_66942701_66942763_66942962_66943090_66950528
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000033998	chr13	-	451	4	NNC	ENSMUSG00000114353.2	novel	464	4	NA	NA	0	884	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	69.8108555710038	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	1	True	NA	NA	NA	66950624	66939249	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_66939417_66942701_66942763_66942962_66943090_66950528
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034015	chr13	+	1338	2	Antisense	novelGene_ENSMUSG00000117784.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATCTGGTCTAATTAA	NA	False	NA	NA	False	AATAAA	-30	NA	66950773	66957109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr13_+_66950925_66955922
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034047	chr13	-	530	4	NNC	ENSMUSG00000021520.5	novel	535	4	NA	NA	34	20	at_least_one_novel_splicesite	FALSE	canonical	3	133	junction_1	2419.34017634745	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAACGCCTACTGTCATA	7746	False	NA	-5	True	AATAAA	-38	NA	67053408	67048660	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_67048891_67049456_67049633_67050793_67050866_67053356
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034060	chr13	-	232	1	Genic_Genomic	ENSMUSG00000021520.5	novel	NA	NA	NA	NA	1958	20	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAACGCCTACTGTCATA	NA	False	NA	-5	True	AATAAA	-38	NA	67048892	67048660	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr13_-_67048700_67048900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034166	chr13	-	665	4	NNC	ENSMUSG00000097333.8	novel	382	2	NA	NA	-5	6283	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	21.1187120819429	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGATGAATGTATGGACT	9248	False	NA	NA	False	AATAAA	-21	NA	67674270	67657616	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_67657984_67668744_67668841_67669311_67669439_67674195
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034171	chr13	-	2630	4	FSM	ENSMUSG00000097333.8	ENSMUST00000181767.8	2656	4	26	0	-5	0	multi-exon	FALSE	canonical	3	34	junction_2	7.71722460186015	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTGGTCATAGTGTTTA	9248	False	NA	NA	False	NA	NA	NA	67674270	67663899	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_67666232_67668744_67668841_67669311_67669439_67674195
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034173	chr13	-	374	2	FSM	ENSMUSG00000097333.8	ENSMUST00000181573.2	382	2	9	-1	9	1	multi-exon	FALSE	canonical	3	52	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTATTTGGTTTGTTT	9231	False	NA	NA	False	AATAAA	-21	NA	67674287	67669156	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_67669439_67674195
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034199	chr13	+	174	1	FSM	ENSMUSG00000090659.10	ENSMUST00000180507.2	3963	1	2952	837	2952	4	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTTGGTCAGTGTTTT	NA	False	NA	9	True	NA	NA	NA	67937027	67937201	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_67937000_67937200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034227	chr13	+	886	6	NIC	ENSMUSG00000021532.12	novel	2421	7	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	59.4763818670907	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAATTGTCCGTCTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	68730381	68740401	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_+_68730470_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034230	chr13	+	2598	7	NIC	ENSMUSG00000021532.12	novel	2421	7	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	39.5010548382361	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAATTGTCCGTCTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	68730381	68740401	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_+_68730718_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034235	chr13	+	636	3	NNC	ENSMUSG00000021534.9	novel	1826	3	NA	NA	8397	6	intron_retention	FALSE	canonical	3	9	junction_1	4.5	40	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTGTGTTTGTTTTGTG	NA	False	NA	9	True	AATAAA	-25	NA	68753954	68761412	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_68754010_68759279_68759397_68760948
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034271	chr13	+	516	1	NIC	ENSMUSG00000021598.10	novel	913	4	NA	NA	4004	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATGTAATTCTTAAAAT	3814	False	NA	27	True	AATAAA	-23	NA	69963707	69964223	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_+_69963700_69964200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034293	chr13	-	761	2	Antisense	novelGene_ENSMUSG00000066407.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAATGGTCTTTCTCGCCA	NA	False	NA	NA	False	NA	NA	NA	73466272	73381553	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr13_-_73381950_73465907
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034311	chr13	-	759	4	NNC	ENSMUSG00000021606.9	novel	568	4	NA	NA	481	2	at_least_one_novel_splicesite	FALSE	canonical	1	64	junction_3	1097.76935444362	65	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTTGTTTCTTCCTTTC	NA	False	NA	-1	True	AATAAA	-21	NA	73476090	73467990	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_73468180_73468412_73468536_73475534_73475589_73475697
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034318	chr13	-	587	5	NNC	ENSMUSG00000021606.9	novel	568	4	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	1184.05996469773	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGAGTTGTTTCTTCCTT	NA	False	NA	-3	True	AATAAA	-19	NA	73476599	73467992	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_73468180_73468412_73468536_73473349_73473431_73475534_73475589_73476457
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034319	chr13	-	573	4	NNC	ENSMUSG00000021606.9	novel	568	4	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1127.93646393166	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGAGTTGTTTCTTCCTT	NA	False	NA	-3	True	AATAAA	-19	NA	73476603	73467992	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_73468180_73468412_73468536_73475534_73475589_73476394
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034336	chr13	-	188	1	ISM	ENSMUSG00000021606.9	ENSMUST00000223293.2	757	3	8401	36	8391	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGAGTTGTTTCTTCCTT	NA	False	NA	-3	True	AATAAA	-19	NA	73468180	73467992	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_73468000_73468200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034410	chr13	+	185	1	ISM	ENSMUSG00000021610.9	ENSMUST00000022102.9	2340	17	16415	0	2836	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTCTTAACCTCTAAT	4818	False	NA	21	True	AATAAA	-16	NA	73768539	73768724	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_+_73768500_73768700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034416	chr13	+	192	1	Intergenic	novelGene_96	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCAGGGGAGGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	73863631	73863823	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr13_+_73863600_73863800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034424	chr13	-	689	1	ISM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	24646	1103	8076	8	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTCTAACGTCTGCT	1031	False	NA	-12	True	ATTAAA	-22	NA	74061257	74060568	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_74060600_74061300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034433	chr13	-	2490	12	FSM	ENSMUSG00000021572.10	ENSMUST00000036456.8	3641	12	19	1132	-19	0	multi-exon	FALSE	canonical	3	27	junction_5	28.6590098045136	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCACTCTTTTTG	NA	False	NA	1	True	NA	NA	NA	74210399	74185750	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198178_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034470	chr13	-	855	6	ISM	ENSMUSG00000021577.15	ENSMUST00000022062.8	2900	15	40	15084	-1	144	5prime_fragment	FALSE	canonical	3	1612	junction_2	99.1907253728896	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGAGTGTTTGCTTTTT	NA	False	NA	NA	False	TATAAA	-20	NA	74498359	74485456	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034477	chr13	+	1623	3	FSM	ENSMUSG00000021578.18	ENSMUST00000022063.14	9559	3	-6	7942	-6	793	multi-exon	FALSE	canonical	3	416	junction_2	9.5	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGGCATGGTATTACTTT	4344	False	NA	NA	False	NA	NA	NA	74498421	74505960	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_74498528_74500974_74501106_74504574
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034486	chr13	+	1419	3	NNC	ENSMUSG00000021578.18	novel	762	3	NA	NA	1	629	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	208	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTGCTTTTTTTTTTT	4387	False	NA	31	True	TTTAAA	-6	NA	74498464	74505796	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_74498537_74500980_74501106_74504574
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034515	chr13	-	779	2	NNC	ENSMUSG00000113311.2	novel	661	2	NA	NA	-598	-2214	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGTTATCTCTTAAGGT	8398	False	NA	NA	False	NA	NA	NA	74555454	74554515	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_74554795_74554954
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034528	chr13	-	394	1	Intergenic	novelGene_97	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGACTCTCCAGTTACT	NA	False	NA	NA	False	ATTAAA	-21	NA	74628042	74627648	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr13_-_74627600_74628000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034541	chr13	-	2016	4	FSM	ENSMUSG00000113019.2	ENSMUST00000220784.2	395	4	-34	-1587	-34	1587	multi-exon	FALSE	canonical	3	31	junction_3	21.249836600679	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTGGCTACATTTCTT	NA	False	NA	NA	False	NA	NA	NA	74670614	74656129	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_74657816_74659212_74659274_74659474_74659602_74670472
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034549	chr13	-	2880	4	ISM	ENSMUSG00000113047.2	ENSMUST00000222092.2	704	5	387	-2250	5	2060	3prime_fragment	FALSE	canonical	3	33	junction_3	16.8720676464584	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGATGTC	NA	False	NA	NA	False	NA	NA	NA	74711988	74699968	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_74702530_74703925_74703987_74704201_74704329_74711857
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034577	chr13	-	165	1	Intergenic	novelGene_98	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGCTTAGTCTTTCG	NA	False	NA	NA	False	NA	NA	NA	75762013	75761848	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr13_-_75761800_75762000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034584	chr13	+	393	2	Genic_Genomic	ENSMUSG00000074800.5	novel	276	1	NA	NA	-32	6808	multi-exon	FALSE	canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGATACAAAATAAATTTGA	3131	False	NA	NA	False	AATAAA	-13	NA	75792982	75800098	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr13_+_75793344_75800066
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034598	chr13	+	1299	3	NNC	ENSMUSG00000021591.9	novel	1345	3	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	143.5	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTGTCCGGTTCTGT	NA	False	NA	30	True	ATTAAA	-22	NA	75988025	75998270	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_75988295_75995288_75995411_75997362
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034602	chr13	+	843	1	ISM	ENSMUSG00000021591.9	ENSMUST00000022082.8	1345	3	9441	0	9233	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTGTCCGGTTCTGT	NA	False	NA	30	True	ATTAAA	-22	NA	75997427	75998270	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_+_75997400_75998300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034647	chr13	+	229	1	Intergenic	novelGene_99	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTGTCTTGGTCTCGT	NA	False	NA	NA	False	NA	NA	NA	78467293	78467522	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr13_+_78467300_78467500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034670	chr13	-	506	1	Intergenic	novelGene_100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTACTTGTGAACTGTT	NA	False	NA	0	True	NA	NA	NA	81784535	81784029	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr13_-_81784000_81784500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034699	chr13	+	825	5	NNC	ENSMUSG00000021537.10	novel	1226	5	NA	NA	-32	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	578.433822921862	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGGTGTATGTTATTT	NA	False	NA	24	True	TATAAA	-17	NA	81931364	81945038	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_81931477_81932759_81932896_81934961_81935081_81940074_81940267_81944772
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034700	chr13	+	815	5	NNC	ENSMUSG00000021537.10	novel	1226	5	NA	NA	-32	3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	576.702858931703	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGGTGTATGTTATTT	NA	False	NA	24	True	TATAAA	-17	NA	81931364	81945038	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_81931477_81932759_81932896_81934961_81935077_81940080_81940267_81944772
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034701	chr13	+	817	5	NNC	ENSMUSG00000021537.10	novel	1226	5	NA	NA	-32	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	578.433822921862	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGGTGTATGTTATTT	NA	False	NA	24	True	TATAAA	-17	NA	81931364	81945038	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_81931477_81932759_81932896_81934961_81935073_81940074_81940267_81944772
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034702	chr13	+	819	5	NNC	ENSMUSG00000021537.10	novel	1226	5	NA	NA	-32	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	578.433822921862	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGGTGTATGTTATTT	NA	False	NA	24	True	TATAAA	-17	NA	81931364	81945038	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_81931477_81932759_81932896_81934961_81935081_81940080_81940267_81944772
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034713	chr13	+	835	5	NNC	ENSMUSG00000021537.10	novel	1226	5	NA	NA	-30	3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	576.702858931703	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGGTGTATGTTATTT	NA	False	NA	24	True	TATAAA	-17	NA	81931366	81945038	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_81931477_81932759_81932896_81934961_81935077_81940058_81940267_81944772
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034740	chr13	+	266	1	ISM	ENSMUSG00000021537.10	ENSMUST00000022009.10	1226	5	13577	236	4677	3	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGGTGTATGTTATTT	NA	False	NA	24	True	TATAAA	-17	NA	81944772	81945038	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_+_81944800_81945000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034795	chr13	-	1162	2	FSM	ENSMUSG00000017778.15	ENSMUST00000132233.2	709	2	-443	-10	-16	5	multi-exon	FALSE	canonical	3	10515	junction_1	0	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCGTCTCTGCAATAAG	NA	False	NA	-9	True	AATAAA	-21	NA	86194909	86192929	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_86193028_86193845
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034819	chr13	-	1974	1	FSM	ENSMUSG00000064917.2	ENSMUST00000082983.2	60	1	-1741	-173	-1741	173	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGCCTCGTCTCTGCA	NA	False	NA	-14	True	AATAAA	-16	NA	86194908	86192934	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_86192900_86194900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034849	chr13	+	509	3	NNC	ENSMUSG00000012422.15	novel	8689	4	NA	NA	-10	41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	516.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTGTGTCAGGACTGC	NA	False	NA	9	True	NA	NA	NA	90237842	90252821	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_90237903_90246480_90246602_90252493
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034887	chr13	+	521	4	NNC	ENSMUSG00000049517.9	novel	937	4	NA	NA	-81	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9419.93886510004	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGTCTTACTTCCT	NA	False	NA	NA	False	AATAAA	-20	NA	91071254	91072849	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_91071301_91071705_91071866_91072444_91072566_91072655
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034919	chr13	+	499	4	NNC	ENSMUSG00000049517.9	novel	937	4	NA	NA	-54	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	8385.23560922543	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGTCTTACTTCCT	NA	False	NA	NA	False	AATAAA	-20	NA	91071281	91072849	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_91071319_91071705_91071866_91072444_91072566_91072668
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034920	chr13	+	1091	3	NIC	ENSMUSG00000049517.9	novel	937	4	NA	NA	-54	6	intron_retention	FALSE	canonical	3	13520	junction_1	3144.5	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGTCTTACTTCCT	NA	False	NA	NA	False	AATAAA	-20	NA	91071281	91072849	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_+_91071319_91071705_91072566_91072655
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034923	chr13	+	505	4	NNC	ENSMUSG00000049517.9	novel	937	4	NA	NA	-54	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	9229.47713699006	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGTCTTACTTCCT	NA	False	NA	NA	False	AATAAA	-20	NA	91071281	91072849	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_91071319_91071710_91071864_91072444_91072566_91072655
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034940	chr13	+	440	2	NIC	ENSMUSG00000049517.9	novel	937	4	NA	NA	-52	6	intron_retention	FALSE	canonical	2	14	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGTCTTACTTCCT	NA	False	NA	NA	False	AATAAA	-20	NA	91071283	91072849	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_+_91071319_91072444
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034946	chr13	+	987	2	NIC	ENSMUSG00000049517.9	novel	658	4	NA	NA	-52	6	intron_retention	FALSE	canonical	3	20152	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGTCTTACTTCCT	NA	False	NA	NA	False	AATAAA	-20	NA	91071283	91072849	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_+_91071866_91072444
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034970	chr13	-	380	1	ISM	ENSMUSG00000021621.16	ENSMUST00000022121.13	1541	6	10793	0	4068	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTGAACTGATCA	NA	False	NA	NA	False	AATAAA	-16	NA	91945031	91944651	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_91944700_91945000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034972	chr13	-	1469	5	NIC	ENSMUSG00000021621.16	novel	1541	6	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	56.3427013906859	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTGAACTGATCA	NA	False	NA	NA	False	AATAAA	-16	NA	91955821	91944651	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_-_91945374_91948729_91948823_91948984_91949136_91953869_91954280_91955728
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034975	chr13	-	577	2	ISM	ENSMUSG00000021621.16	ENSMUST00000178084.2	931	4	-24	6831	20	-5175	5prime_fragment	FALSE	canonical	3	139	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGCAGTCCTAGTGCCA	NA	False	NA	NA	False	AATACA	-19	NA	91955804	91953778	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_91954280_91955728
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000034999	chr13	+	924	1	ISM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	30039	3365	30039	-3365	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCATCTCAGCAGGGT	NA	False	NA	18	True	AATAAA	-21	NA	92521272	92522196	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_+_92521300_92522200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035015	chr13	-	618	1	ISM	ENSMUSG00000021687.15	ENSMUST00000022197.15	4259	9	83779	123	44508	-123	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTTTGTATAATTTTA	NA	False	NA	-1	True	AATAAA	-16	NA	94338558	94337940	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_94337900_94338600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035025	chr13	+	592	4	NNC	ENSMUSG00000042043.7	novel	559	4	NA	NA	-31	6	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_2	585.141198534356	399	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGTTGGCCACTTAGT	NA	False	NA	43	True	AATAAA	-43	NA	94925386	94979436	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_94925511_94968867_94968974_94973619_94973703_94979157
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035052	chr13	+	1951	2	FSM	ENSMUSG00000041995.9	ENSMUST00000045909.8	1894	2	-56	-1	-56	1	multi-exon	FALSE	canonical	3	65	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGTGTTCTGCTTGCATGT	NA	False	NA	39	True	NA	NA	NA	95461688	95474350	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_95461853_95472563
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035070	chr13	-	868	1	Genic_Genomic	ENSMUSG00000048376.7	novel	NA	NA	NA	NA	15837	20	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAGATTGTTCCTGTGGG	NA	False	NA	NA	False	AATAAA	-23	NA	95739158	95738290	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr13_-_95738300_95739200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035076	chr13	-	924	1	FSM	ENSMUSG00000114133.2	ENSMUST00000220449.2	2161	1	0	1237	0	-1237	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTTTCCTAACAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	96217884	96216960	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_96217000_96217900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035085	chr13	-	872	5	NNC	ENSMUSG00000047117.14	novel	704	6	NA	NA	-126	-3916	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	2.04633819296811	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTTGTAAAGTGCATACG	NA	False	NA	NA	False	NA	NA	NA	96582651	96576367	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_96576595_96577282_96577375_96578064_96578164_96580786_96580886_96582296
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035102	chr13	+	189	1	Intergenic	novelGene_101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAGTTAATCACA	NA	False	NA	21	True	NA	NA	NA	97150529	97150718	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr13_+_97150500_97150700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035109	chr13	-	2707	6	FSM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	-7	0	-7	0	multi-exon	FALSE	canonical	3	555	junction_1	171.768914533451	5160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGTGGTCTAACAGT	NA	False	NA	NA	False	AATAAA	-14	NA	97274452	97265931	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028_97272217_97274262
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035138	chr13	+	402	1	NIC	ENSMUSG00000021666.17	novel	843	10	NA	NA	0	-5925	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTTGGTTTTTGTGGAC	NA	False	NA	NA	False	AATAAA	-28	NA	97274505	97274907	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_+_97274500_97274900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035162	chr13	-	352	3	Antisense	novelGene_ENSMUSG00000078952.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_2	3.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTCTTTCTGAAGGCTG	NA	False	NA	NA	False	NA	NA	NA	97619055	97618032	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr13_-_97618132_97618599_97618764_97618966
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035174	chr13	+	2714	3	FSM	ENSMUSG00000078952.10	ENSMUST00000179324.2	2764	3	50	0	50	0	multi-exon	FALSE	canonical	3	54	junction_2	70.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCGAACTCAAGACCTC	NA	False	NA	21	True	AATAAA	-18	NA	97619258	97633515	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_97619286_97619456_97619541_97630912
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035177	chr13	+	1215	3	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	50	-2748	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_2	6.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATGAAGGAGCAATGAAA	NA	False	NA	NA	False	NA	NA	NA	97619258	97630767	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_97619286_97619456_97619541_97629663
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035212	chr13	-	570	1	FSM	ENSMUSG00000069117.5	ENSMUST00000074072.5	561	1	-1	-8	-1	8	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGATTCGAGAATGACATA	NA	False	NA	NA	False	AATAAA	-41	NA	97897141	97896571	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_97896600_97897100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035216	chr13	+	598	2	NNC	ENSMUSG00000097346.2	novel	1073	3	NA	NA	8956	117294	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCCATCTTGTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	97896575	98014767	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_97897142_98014735
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035245	chr13	+	197	1	ISM	ENSMUSG00000021661.17	ENSMUST00000226100.2	1476	8	10583	0	5292	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGATTATATGCTTGTC	NA	False	NA	14	True	AATAAA	-24	NA	98410229	98410426	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_+_98410200_98410400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035253	chr13	-	886	6	NNC	ENSMUSG00000021660.15	novel	888	6	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2626.11842840341	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTATCATTTTACTTAT	NA	False	NA	-15	True	AATAAA	-38	NA	98453506	98446402	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_98446710_98447488_98447546_98449599_98449802_98450142_98450261_98452737_98452807_98453373
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035268	chr13	-	835	6	NNC	ENSMUSG00000021660.15	novel	888	6	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2626.11842840341	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTATCATTTTACTT	NA	False	NA	-17	True	AATAAA	-36	NA	98453488	98446404	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_98446710_98447488_98447546_98449599_98449802_98450173_98450261_98452737_98452807_98453373
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035277	chr13	-	789	6	NNC	ENSMUSG00000021660.15	novel	888	6	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_3	2553.9774940277	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTATCATTTTACTT	NA	False	NA	-17	True	AATAAA	-36	NA	98453506	98446404	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_98446710_98447488_98447546_98449599_98449711_98450146_98450261_98452737_98452807_98453373
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035280	chr13	-	877	6	NNC	ENSMUSG00000021660.15	novel	888	6	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2642.20286881988	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTATCATTTTACTT	NA	False	NA	-17	True	AATAAA	-36	NA	98453499	98446404	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452733_98452807_98453373
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035284	chr13	-	878	6	NNC	ENSMUSG00000021660.15	novel	888	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2642.20286881988	105	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTATCATTTTACTT	NA	False	NA	-17	True	AATAAA	-36	NA	98453512	98446404	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452745_98452807_98453373
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035289	chr13	-	844	6	NNC	ENSMUSG00000021660.15	novel	888	6	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2642.20286881988	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTATCATTTTACTT	NA	False	NA	-17	True	AATAAA	-36	NA	98453488	98446404	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452755_98452807_98453373
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035322	chr13	-	837	5	NNC	ENSMUSG00000021660.15	novel	888	6	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2855.06220378821	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTATCATTTTACTT	NA	False	NA	-17	True	AATAAA	-36	NA	98453488	98446404	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_98446738_98449595_98449802_98450146_98450261_98452737_98452807_98453373
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035330	chr13	-	474	1	ISM	ENSMUSG00000092116.2	ENSMUST00000170205.2	527	2	2180	0	2180	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAAGAATTTAGTGTACC	NA	False	NA	NA	False	AATAAA	-30	NA	98626329	98625855	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_98625900_98626300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035341	chr13	-	746	3	NNC	ENSMUSG00000114689.2	novel	570	2	NA	NA	-1186	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	35.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCCTCCATCTTTGAACA	NA	False	NA	-6	True	ATTAAA	-23	NA	98854204	98849581	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_98850076_98852942_98853093_98854102
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035367	chr13	+	141	1	Intergenic	novelGene_102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGTTCCGTTCTGTTCGTG	9290	False	NA	NA	False	NA	NA	NA	99257310	99257451	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr13_+_99257300_99257500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035408	chr13	-	585	1	Intergenic	novelGene_103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTATTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	99687750	99687165	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr13_-_99687200_99687800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035410	chr13	-	2139	17	NNC	ENSMUSG00000021646.10	novel	2123	17	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	79.0217533341295	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTAGGGTTGTTGAGAT	658	False	NA	-5	True	AATAAA	-16	NA	100152158	100085039	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097403_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100151893
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035419	chr13	+	586	3	FSM	ENSMUSG00000021643.16	ENSMUST00000022145.15	601	3	15	0	15	0	multi-exon	FALSE	canonical	3	69	junction_1	3	292	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGAATATTATTTTTAT	NA	False	NA	NA	False	AATAAA	-25	NA	100244534	100250746	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_100244738_100245530_100245640_100250472
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035426	chr13	+	1211	9	NNC	ENSMUSG00000021645.17	novel	1222	9	NA	NA	0	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	243.972046298341	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGACTTTATAGATATTT	NA	False	NA	20	True	AATAAA	-16	NA	100261365	100274201	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_100261474_100263094_100263167_100263377_100263498_100264312_100264514_100264722_100264870_100267587_100267684_100268863_100268975_100272204_100272248_100273888
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035431	chr13	+	1203	9	NNC	ENSMUSG00000021645.17	novel	1222	9	NA	NA	12	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	252.99848690259	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGACTTTATAGATATTT	NA	False	NA	20	True	AATAAA	-16	NA	100261377	100274201	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_100261474_100263094_100263167_100263377_100263498_100264312_100264514_100264722_100264870_100267591_100267684_100268863_100268975_100272196_100272248_100273888
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035441	chr13	+	319	1	Genic_Genomic	ENSMUSG00000021645.17	novel	NA	NA	NA	NA	1988	9	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATAGATATTTTCCTTT	1732	False	NA	26	True	AATAAA	-22	NA	100273888	100274207	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr13_+_100273900_100274200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035513	chr13	+	591	1	Genic_Genomic	ENSMUSG00000078941.10	novel	NA	NA	NA	NA	14199	56	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTCAGTATTGCTTTTA	NA	False	NA	9	True	ATTAAA	-5	NA	100802332	100802923	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr13_+_100802300_100802900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035518	chr13	-	1912	12	FSM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	-36	112	-36	-112	multi-exon	FALSE	canonical	3	644	junction_3	44.8636133370117	1554	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGCTTTCTGTTTTTTA	NA	False	NA	NA	False	AATAAA	-26	NA	100867483	100839250	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035549	chr13	+	207	1	Intergenic	novelGene_104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGATCTTCGGCTGGGC	NA	False	NA	NA	False	NA	NA	NA	100868422	100868629	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr13_+_100868400_100868600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035564	chr13	-	1029	5	NNC	ENSMUSG00000061474.12	novel	701	4	NA	NA	-417	0	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_4	528.080190406722	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTTTTCTGTTTATTT	NA	False	NA	NA	False	AATAAA	-1	NA	100881584	100872462	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_100872782_100875521_100875704_100877675_100877740_100881037_100881156_100881238
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035566	chr13	-	1112	4	FSM	ENSMUSG00000061474.12	ENSMUST00000078573.5	571	4	-419	-122	-417	0	multi-exon	FALSE	canonical	3	151	junction_2	492.52884856287	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTTTTCTGTTTATTT	NA	False	NA	NA	False	AATAAA	-1	NA	100881584	100872462	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_100872782_100875521_100875704_100877675_100877740_100881037
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035569	chr13	-	1035	5	NNC	ENSMUSG00000061474.12	novel	701	4	NA	NA	-417	0	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_4	463.256408482387	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTTTTCTGTTTATTT	NA	False	NA	NA	False	AATAAA	-1	NA	100881584	100872462	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_100872782_100875521_100875710_100877675_100877740_100881037_100881156_100881238
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035570	chr13	-	1045	6	NNC	ENSMUSG00000061474.12	novel	469	5	NA	NA	-417	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_3	561.80437876542	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTTTTCTGTTTATTT	NA	False	NA	NA	False	AATAAA	-1	NA	100881584	100872462	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_100872782_100875521_100875710_100877675_100877740_100880296_100880333_100881037_100881130_100881238
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035571	chr13	-	1154	5	FSM	ENSMUSG00000061474.12	ENSMUST00000076037.9	469	5	-488	-197	-417	0	multi-exon	FALSE	canonical	3	27	junction_3	598.6340179943	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTTTTCTGTTTATTT	NA	False	NA	NA	False	AATAAA	-1	NA	100881584	100872462	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_100872782_100875521_100875710_100877675_100877740_100880296_100880333_100881037
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035572	chr13	-	911	4	NNC	ENSMUSG00000061474.12	novel	701	4	NA	NA	-417	0	at_least_one_novel_splicesite	FALSE	canonical	3	151	junction_2	517.40463426177	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTTTTCTGTTTATTT	NA	False	NA	NA	False	AATAAA	-1	NA	100881584	100872462	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_100872782_100875521_100875704_100877675_100877740_100881238
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035576	chr13	-	953	5	NNC	ENSMUSG00000061474.12	novel	469	5	NA	NA	-417	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	603.394771273335	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTTTTCTGTTTATTT	NA	False	NA	NA	False	AATAAA	-1	NA	100881584	100872462	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_100872782_100875521_100875710_100877675_100877740_100880296_100880333_100881238
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035578	chr13	-	913	4	NNC	ENSMUSG00000061474.12	novel	701	4	NA	NA	-417	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	578.671082932457	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTTTTCTGTTTATTT	NA	False	NA	NA	False	AATAAA	-1	NA	100881584	100872462	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_-_100872782_100875521_100875710_100877675_100877736_100881238
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035583	chr13	-	507	3	NIC	ENSMUSG00000061474.12	novel	701	4	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	70	junction_1	506	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTTTTCTGTTTATTT	NA	False	NA	NA	False	AATAAA	-1	NA	100881161	100872462	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_-_100872782_100877675_100877740_100881037
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035632	chr13	-	465	1	ISM	ENSMUSG00000045273.9	ENSMUST00000075550.4	1251	9	15755	6	15639	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATACTTGCAGGACTGGA	NA	False	NA	-5	True	AATAAA	-35	NA	100896652	100896187	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_100896200_100896700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035639	chr13	-	2449	9	FSM	ENSMUSG00000041431.17	ENSMUST00000072119.15	2489	9	-38	78	-38	4	multi-exon	FALSE	canonical	3	2476	junction_6	457.563588477055	2538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCCTTTTGACTGTTTA	NA	False	NA	-2	True	AATAAA	-32	NA	100923116	100915235	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035666	chr13	-	1794	4	ISM	ENSMUSG00000041431.17	ENSMUST00000174038.2	1182	8	-94	2624	-10	742	5prime_fragment	FALSE	canonical	3	2476	junction_1	625.335287843427	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGATGGTTGTGAGCCA	NA	False	NA	NA	False	NA	NA	NA	100923004	100918809	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_100920156_100921964_100922127_100922240_100922412_100922889
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035690	chr13	-	862	1	Genic_Genomic	ENSMUSG00000021710.12	novel	NA	NA	NA	NA	10669	14	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTTTGTCTTTTAATGT	NA	False	NA	1	True	AATAAA	-33	NA	104160412	104159550	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr13_-_104159600_104160400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035751	chr13	+	1013	10	NNC	ENSMUSG00000021714.16	novel	1353	10	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	139.724685200293	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATAGTTTGTCTTTGTT	NA	False	NA	10	True	AATAAA	-21	NA	104365442	104386125	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_104365511_104367239_104367388_104369165_104369223_104370654_104370728_104372686_104372734_104378696_104378780_104378862_104378962_104379253_104379381_104381785_104381840_104385868
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035768	chr13	+	981	10	NNC	ENSMUSG00000021714.16	novel	1353	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	142.474515806586	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATAGTTTGTCTTTGTT	NA	False	NA	10	True	AATAAA	-21	NA	104365473	104386125	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_104365511_104367236_104367388_104369165_104369223_104370654_104370728_104372686_104372734_104378696_104378780_104378866_104378962_104379253_104379381_104381785_104381840_104385868
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035778	chr13	-	2069	14	FSM	ENSMUSG00000021715.13	ENSMUST00000022228.13	2071	14	2	0	2	0	multi-exon	FALSE	canonical	3	502	junction_8	84.1316241226496	1848	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGCCTCCCGCTTTATT	NA	False	NA	1	True	AATAAA	-37	NA	104953459	104767647	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035823	chr13	+	211	1	Intergenic	novelGene_105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAGTAGTATAAGCATTA	NA	False	NA	NA	False	NA	NA	NA	107021219	107021430	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr13_+_107021200_107021400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035860	chr13	+	367	2	FSM	ENSMUSG00000114893.2	ENSMUST00000224166.2	340	2	-14	-13	-14	13	multi-exon	FALSE	canonical	2	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGTCATCTTTCATTTT	NA	False	NA	NA	False	AATAAA	-38	NA	107170777	107171738	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_107170837_107171430
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035874	chr13	+	2038	3	FSM	ENSMUSG00000071180.6	ENSMUST00000226042.2	1092	3	-10	-936	-10	3	multi-exon	FALSE	canonical	3	16	junction_1	87.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGAGTTTTTGTCTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	108181009	108185709	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_108181168_108182958_108183103_108183973
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035950	chr13	+	893	1	FSM	ENSMUSG00000059751.8	ENSMUST00000074680.8	795	1	-37	-61	-37	61	mono-exon	FALSE	NA	NA	NA	NA	NA	12225	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTAGCATCTTGATTTCT	NA	False	NA	NA	False	AATAAA	-33	NA	108807099	108807992	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_108807100_108808000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000035988	chr13	+	527	2	Antisense	novelGene_ENSMUSG00000116016.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTATCAAGATTCCAACTA	NA	False	NA	NA	False	AATAAA	-20	NA	111654250	111657685	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr13_+_111654347_111657254
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036022	chr13	+	405	1	ISM	ENSMUSG00000021756.13	ENSMUST00000183663.8	8678	17	42375	3237	31399	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTCGTGTGTAAAAATG	3507	False	NA	24	True	AATAAA	-25	NA	112642978	112643383	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_+_112643000_112643400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036058	chr13	+	256	2	NNC	ENSMUSG00000021759.15	novel	1598	6	NA	NA	66909	1147	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAATGGCTTTTGCTGCTT	NA	False	NA	NA	False	TATAAA	-44	NA	113004305	113005575	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr13_+_113004523_113005536
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036062	chr13	-	226	1	NIC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	5022	83	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACAGGCTTCATT	NA	False	NA	-22	True	AATAAA	-21	NA	113004531	113004305	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_-_113004300_113004500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036071	chr13	+	622	1	NIC	ENSMUSG00000042426.7	novel	1272	8	NA	NA	-1611	-645	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATATAGAAAAATGTGTACT	NA	False	NA	NA	False	ATTAAA	-22	NA	113067444	113068066	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_+_113067400_113068100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036087	chr13	+	408	2	Intergenic	novelGene_106	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTAATTTCTCCTTAT	NA	False	NA	NA	False	ATTAAA	-19	NA	113425097	113426146	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr13_+_113425260_113425900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036110	chr13	+	1401	3	Intergenic	novelGene_107	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	12	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTAACTTAGTCTGA	2108	False	NA	6	True	AATAAA	-17	NA	113872787	113876380	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr13_+_113872828_113872948_113873083_113875153
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036117	chr13	+	628	1	Genic_Genomic	ENSMUSG00000042348.11	novel	NA	NA	NA	NA	362213	1	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTGACTGACTTTTTT	NA	False	NA	18	True	AATAAA	-18	NA	114293370	114293998	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr13_+_114293400_114294000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036122	chr13	-	1539	5	FSM	ENSMUSG00000021764.9	ENSMUST00000022286.8	1698	5	159	0	-19	0	multi-exon	FALSE	canonical	3	1521	junction_3	83.4187478927849	19185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGCTGTTATGTTTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	114524635	114424330	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_-_114425403_114444352_114444427_114453392_114453566_114487983_114488063_114524494
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036145	chr13	-	230	1	NIC	ENSMUSG00000021764.9	novel	1698	5	NA	NA	99176	4	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGGCAGTTTCTATTTT	NA	False	NA	-14	True	AATAAA	-23	NA	114425409	114425179	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_-_114425200_114425400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036150	chr13	-	420	3	NIC	ENSMUSG00000021764.9	novel	686	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	760.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACACTTGGCAGTTTCTA	NA	False	NA	-18	True	AATAAA	-19	NA	114524616	114425183	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_-_114425403_114487983_114488063_114524494
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036154	chr13	-	494	4	NIC	ENSMUSG00000021764.9	novel	686	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	736.333408782251	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACACTTGGCAGTTTCTA	NA	False	NA	-18	True	AATAAA	-19	NA	114524616	114425183	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr13_-_114425403_114444352_114444427_114487983_114488063_114524494
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036222	chr13	+	404	1	ISM	ENSMUSG00000025451.16	ENSMUST00000109203.9	1525	11	28387	0	7558	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTAGCTGGTTAGATG	NA	False	NA	109	True	AATAAA	-36	NA	119593523	119593927	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_+_119593500_119593900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036225	chr13	+	547	1	ISM	ENSMUSG00000025451.16	ENSMUST00000026520.14	2551	11	28750	0	8242	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTATCTTAAAGAATTTTT	NA	False	NA	46	True	AATAAA	-31	NA	119594207	119594754	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_+_119594200_119594800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036229	chr13	+	448	1	FSM	ENSMUSG00000062822.9	ENSMUST00000225292.2	1563	1	-17	1132	-9	-1132	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCTTCAACATGCAGAGG	NA	False	NA	NA	False	NA	NA	NA	119599294	119599742	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_119599300_119599700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036233	chr13	+	992	4	FSM	ENSMUSG00000062822.9	ENSMUST00000224081.2	978	4	-8	-6	-2	6	multi-exon	FALSE	canonical	3	42	junction_1	38.4389848403357	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTTGAAATCTAAAAACG	NA	False	NA	5	True	AATAAA	-21	NA	119599301	119606367	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr13_+_119599656_119602609_119602841_119603402_119603493_119606050
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036259	chr13	-	755	5	ISM	ENSMUSG00000094870.9	ENSMUST00000223722.2	3109	7	-233	11196	-233	-75	5prime_fragment	FALSE	canonical	3	13	junction_4	61.5441914399726	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGCAGAAACTTCAAATG	NA	False	NA	NA	False	AAAAAG	-4	NA	120252658	120237919	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252355
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036267	chr13	-	935	2	ISM	ENSMUSG00000096175.4	ENSMUST00000187530.3	1374	3	15776	-63	-744	63	3prime_fragment	FALSE	canonical	1	1	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGTTCTTCTTAAAGT	NA	False	NA	0	True	AATAAA	-18	NA	120375032	120373567	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_-_120374317_120374846
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036272	chr13	-	877	2	Intergenic	novelGene_108	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGATTAAAGGAAGGAACT	NA	False	NA	NA	False	NA	NA	NA	120404394	120399221	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr13_-_120399261_120403556
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036278	chr13	+	913	2	ISM	ENSMUSG00000094796.3	ENSMUST00000225029.2	1595	5	7352	-64	-402	64	3prime_fragment	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTCTTCTTAAAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	120769279	120770379	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr13_+_120769467_120769653
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036292	chr14	+	652	1	Genic_Genomic	ENSMUSG00000021774.14	novel	NA	NA	NA	NA	43920	2	mono-exon	FALSE	NA	NA	NA	NA	NA	628	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGTGTTCATTTCCT	NA	False	NA	26	True	AATAAA	-23	NA	4186324	4186976	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_+_4186300_4187000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036316	chr14	+	2061	4	FSM	ENSMUSG00000012405.17	ENSMUST00000079419.12	883	4	-41	-1137	-3	0	multi-exon	FALSE	canonical	3	1636	junction_1	5972.09066315046	6201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTTATCTTTTATGTT	NA	False	NA	NA	False	AATAAA	-18	NA	4198625	4201873	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_+_4198874_4199235_4199418_4199652_4199790_4200379
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036380	chr14	+	740	4	NNC	ENSMUSG00000012405.17	novel	1922	4	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6686.17593745982	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	False	NA	2	True	AATAAA	-17	NA	4198709	4200736	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_4198738_4199199_4199418_4199652_4199790_4200379
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036389	chr14	+	835	4	NNC	ENSMUSG00000012405.17	novel	883	4	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4532.06975037038	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	False	NA	2	True	AATAAA	-17	NA	4198709	4200736	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_4198874_4199235_4199418_4199652_4199790_4200384
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036391	chr14	+	824	4	NNC	ENSMUSG00000012405.17	novel	883	4	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	2	324	junction_2	7181.57939917583	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	False	NA	2	True	AATAAA	-17	NA	4198709	4200736	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_4198874_4199235_4199418_4199668_4199790_4200379
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036470	chr14	-	703	5	NIC	ENSMUSG00000068758.9	novel	1128	10	NA	NA	353	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	12.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTGCTGCTATCAGT	NA	False	NA	1	True	AATAAA	-19	NA	8119789	8114269	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_-_8114394_8114689_8114757_8117743_8117847_8118598_8118714_8119495
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036498	chr14	+	1329	8	NNC	ENSMUSG00000021737.5	novel	1387	8	NA	NA	-12	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	430.220541450213	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTTAATTTTTTTTC	NA	False	NA	14	True	AATAAA	-16	NA	8348817	8357578	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_8349025_8349570_8349769_8352792_8352939_8353159_8353380_8353506_8353616_8355471_8355641_8357159_8357238_8357376
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036502	chr14	+	1309	8	NNC	ENSMUSG00000021737.5	novel	1387	8	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	429.131348523636	748	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTCTTAAACATACA	NA	False	NA	25	True	AATAAA	-27	NA	8348819	8357589	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_8348988_8349570_8349777_8352792_8352939_8353159_8353380_8353506_8353616_8355471_8355641_8357159_8357238_8357376
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036520	chr14	+	1000	8	FSM	ENSMUSG00000053453.10	ENSMUST00000065865.10	937	8	-63	0	-63	0	multi-exon	TRUE	canonical	3	370	junction_1	118.776758531907	1530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTGCTCATTCAAAAC	NA	False	NA	22	True	AATAAA	-16	NA	8508422	8520751	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_+_8508579_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036524	chr14	+	931	8	NIC	ENSMUSG00000053453.10	novel	937	8	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	208	junction_2	184.198207352397	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTGCTCATTCAAAAC	NA	False	NA	22	True	AATAAA	-16	NA	8508464	8520751	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_+_8508579_8515106_8515198_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036527	chr14	+	1105	9	NIC	ENSMUSG00000053453.10	novel	951	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	272.312292001298	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTGCTCATTCAAAAC	NA	False	NA	22	True	AATAAA	-16	NA	8508489	8520751	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_+_8508579_8512131_8512304_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036548	chr14	+	1041	9	NNC	ENSMUSG00000053453.10	novel	951	9	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	286.046516103588	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTGCTCATTCAAAAC	NA	False	NA	22	True	AATAAA	-16	NA	8508568	8520751	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_8508594_8512131_8512304_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036608	chr14	+	1232	1	FSM	ENSMUSG00000045799.7	ENSMUST00000052615.7	336	1	-187	-709	-187	709	mono-exon	FALSE	NA	NA	NA	NA	NA	2477	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACAGTGTTTGTGACTA	NA	False	NA	NA	False	NA	NA	NA	13669250	13670482	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_+_13669200_13670500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036620	chr14	+	1155	2	Genic_Genomic	ENSMUSG00000045799.7	novel	336	1	NA	NA	-182	706	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTACAGTGTTTGTGA	NA	False	NA	NA	False	NA	NA	NA	13669255	13670479	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_+_13669596_13669664
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036627	chr14	+	1155	2	Genic_Genomic	ENSMUSG00000045799.7	novel	336	1	NA	NA	-182	706	multi-exon	TRUE	canonical	1	276	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTACAGTGTTTGTGA	NA	False	NA	NA	False	NA	NA	NA	13669255	13670479	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_+_13669618_13669686
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036636	chr14	+	1175	2	Genic_Genomic	ENSMUSG00000045799.7	novel	336	1	NA	NA	-179	707	multi-exon	TRUE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTACAGTGTTTGTGAC	NA	False	NA	NA	False	NA	NA	NA	13669258	13670480	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_+_13669618_13669664
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036689	chr14	+	1458	10	NNC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_4	785.462936548478	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTTGGAGTACTATT	NA	False	NA	NA	False	AATAAA	-16	NA	14296821	14303777	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298578_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036690	chr14	+	1403	9	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	829.856727092093	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTTGGAGTACTATT	NA	False	NA	NA	False	AATAAA	-16	NA	14296821	14303777	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036697	chr14	+	1428	10	NNC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	799.417720192657	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTTGGAGTACTATT	NA	False	NA	NA	False	AATAAA	-16	NA	14296824	14303777	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298451_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036708	chr14	-	584	1	ISM	ENSMUSG00000033885.16	ENSMUST00000036682.9	2812	18	66320	3	29177	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTGTAGCTTTGCTAG	NA	False	NA	-3	True	AATAAA	-14	NA	14305242	14304658	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_-_14304700_14305200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036726	chr14	-	963	4	ISM	ENSMUSG00000023156.5	ENSMUST00000023924.4	2401	6	-33	3759	-33	-2479	5prime_fragment	FALSE	canonical	3	219	junction_2	5.09901951359278	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATTGGTTCCTGATTGA	NA	False	NA	NA	False	NA	NA	NA	14389439	14381697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_-_14382310_14385771_14385857_14385978_14386066_14389260
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036751	chr14	-	999	1	FSM	ENSMUSG00000094242.3	ENSMUST00000170706.2	844	1	-19	-136	-19	136	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATATATAGACTAGCAATT	NA	False	NA	NA	False	AATAAA	-22	NA	15228350	15227351	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_-_15227400_15228400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036755	chr14	+	948	5	FSM	ENSMUSG00000094021.8	ENSMUST00000169215.8	984	5	55	-19	55	19	multi-exon	FALSE	canonical	0	0	junction_3	8	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATGCTTCAGCTTTCCT	NA	False	NA	NA	False	AATAAA	-22	NA	15424857	15433257	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_+_15424996_15425726_15425890_15426844_15426977_15427652_15427837_15432926
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036781	chr14	-	943	5	FSM	ENSMUSG00000091700.8	ENSMUST00000169465.8	984	5	55	-14	-3	0	multi-exon	FALSE	canonical	0	0	junction_1	8.92678553567856	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTGTATGCTTCAGCT	NA	False	NA	NA	False	AATAAA	-17	NA	17760480	17752094	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_-_17752421_17757500_17757685_17758360_17758493_17759447_17759611_17760342
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036785	chr14	-	943	5	FSM	ENSMUSG00000091148.8	ENSMUST00000169364.8	997	5	55	-1	-8	0	multi-exon	FALSE	canonical	0	0	junction_1	9.1104335791443	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTGTATGCTTCAGCT	NA	False	NA	NA	False	AATAAA	-17	NA	17987973	17979595	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_-_17979922_17984993_17985178_17985853_17985986_17986940_17987104_17987835
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036817	chr14	+	606	1	NIC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	5946	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19861249	19861855	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_+_19861200_19861900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036819	chr14	-	1047	8	FSM	ENSMUSG00000021807.7	ENSMUST00000022341.7	1562	8	-25	540	-25	-540	multi-exon	FALSE	canonical	3	1848	junction_5	420.22365279378	4186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATGTATTCTGTTTCTA	1663	False	NA	2	True	AATAAA	-42	NA	19873917	19861958	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_-_19862306_19862416_19862466_19864604_19864674_19866252_19866342_19867128_19867216_19869974_19870075_19872633_19872759_19873736
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036881	chr14	-	1103	1	ISM	ENSMUSG00000023243.10	ENSMUST00000024011.10	3392	5	40650	0	4135	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGGTATGTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	20191227	20190124	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_-_20190100_20191200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036888	chr14	-	394	1	ISM	ENSMUSG00000021810.4	ENSMUST00000022344.4	3132	14	27476	400	27405	-400	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCAGTCTGTGACATTC	8150	False	NA	-1	True	AATAGA	-16	NA	20370713	20370319	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_-_20370300_20370700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036900	chr14	+	162	1	Genic_Genomic	ENSMUSG00000039599.17	novel	NA	NA	NA	NA	5605	4	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTAAATGTTCTCCTCT	NA	False	NA	11	True	NA	NA	NA	20415154	20415316	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_+_20415200_20415300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036946	chr14	-	205	1	ISM	ENSMUSG00000021814.18	ENSMUST00000065504.17	2851	13	24653	16	3689	1	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTTTGACCTAGAGTAA	NA	False	NA	0	True	AATAAA	-25	NA	20505548	20505343	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_-_20505300_20505500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000036972	chr14	+	2069	7	ISM	ENSMUSG00000039367.12	ENSMUST00000223751.2	4196	24	17094	-2	167	0	3prime_fragment	FALSE	canonical	3	326	junction_1	27.4813067779213	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCTCATTACTCGCGAC	NA	False	NA	15	True	AATAAA	-18	NA	20741504	20744920	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_+_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037000	chr14	+	574	3	NNC	ENSMUSG00000063787.5	novel	578	3	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	48	junction_2	42	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCATTTCTTCTAATT	NA	False	NA	33	True	AATAAA	-16	NA	20753121	20754493	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_20753266_20753343_20753477_20754196
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037011	chr14	+	309	1	NIC	ENSMUSG00000063787.5	novel	616	3	NA	NA	966	0	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCATTTCTTCTAATT	NA	False	NA	33	True	AATAAA	-16	NA	20754184	20754493	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_+_20754200_20754500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037015	chr14	-	550	1	Genic_Genomic	ENSMUSG00000021820.19	novel	NA	NA	NA	NA	3945	2	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTATTGCTGTTGGAG	8563	False	NA	2	True	AATAAA	-20	NA	20785490	20784940	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_-_20784900_20785500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037025	chr14	+	2327	3	ISM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	99847	3	7242	-3	3prime_fragment	FALSE	canonical	3	294	junction_1	8	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCTCTAATTGAGGTTA	2289	False	NA	NA	False	AATAAA	-16	NA	21079312	21083741	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_+_21079448_21079849_21079955_21081654
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037043	chr14	+	332	2	FSM	ENSMUSG00000039197.11	ENSMUST00000223558.2	289	2	-32	-11	5	11	multi-exon	FALSE	canonical	3	60	junction_1	0	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTTTAACAGTGCTTAC	NA	False	NA	15	True	AATAAA	-26	NA	21102646	21103999	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_+_21102769_21103789
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037064	chr14	-	149	1	Intergenic	novelGene_109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	21528365	21528216	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr14_-_21528200_21528400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037071	chr14	+	190	1	ISM	ENSMUSG00000021767.20	ENSMUST00000069648.14	7649	17	172503	1	46536	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGATCTTCATTTTG	NA	False	NA	12	True	AATAAA	-22	NA	21722355	21722545	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_+_21722400_21722500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037115	chr14	+	1310	10	NNC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	740.930646027158	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTGTGCATGTTTGTT	NA	False	NA	22	True	AATAGA	-18	NA	21881624	21895587	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_21881736_21881918_21881982_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037117	chr14	+	1301	10	NNC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	741.794088097096	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTGTGCATGTTTGTT	NA	False	NA	22	True	AATAGA	-18	NA	21881624	21895587	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883914_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037148	chr14	-	249	1	ISM	ENSMUSG00000021773.12	ENSMUST00000124549.9	2314	7	1550	1324	383	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGAGCATCCTCTTCC	NA	False	NA	-10	True	AATAAA	-17	NA	21897495	21897246	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_-_21897200_21897500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037150	chr14	-	921	7	NNC	ENSMUSG00000021773.12	novel	2314	7	NA	NA	-16	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	102.842382097828	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGAGCATCCTCTTCC	NA	False	NA	-10	True	AATAAA	-17	NA	21898978	21897246	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_21897496_21897681_21897804_21897930_21897996_21898069_21898189_21898277_21898384_21898608_21898737_21898846
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037154	chr14	-	919	7	NNC	ENSMUSG00000021773.12	novel	2314	7	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	100.816114232244	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGAGCATCCTCTTCC	NA	False	NA	-10	True	AATAAA	-17	NA	21898978	21897246	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_21897496_21897681_21897816_21897940_21897992_21898069_21898189_21898277_21898384_21898608_21898737_21898846
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037167	chr14	-	1109	6	NIC	ENSMUSG00000021773.12	novel	2314	7	NA	NA	-16	0	intron_retention	FALSE	canonical	3	244	junction_2	16.9870538940689	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGAGCATCCTCTTCC	NA	False	NA	-10	True	AATAAA	-17	NA	21898978	21897246	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_-_21897816_21897940_21897996_21898069_21898189_21898277_21898384_21898608_21898737_21898846
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037181	chr14	-	2438	6	NNC	ENSMUSG00000021782.15	novel	6336	27	NA	NA	1666	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	61.1764660633483	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTGTAGACCCTGG	NA	False	NA	-4	True	AATAAA	-16	NA	24194590	24184020	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194365
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037195	chr14	+	888	6	FSM	ENSMUSG00000025290.18	ENSMUST00000169826.3	519	6	-90	-279	-53	266	multi-exon	FALSE	canonical	3	4464	junction_5	3607.86166031903	13990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTGAGGTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	24540695	24546192	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545497_24545518_24545842
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037217	chr14	+	571	6	NNC	ENSMUSG00000025290.18	novel	519	6	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	4300.32231350163	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	18	True	AATAAA	-17	NA	24540751	24545927	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_24540827_24541817_24541884_24541974_24542189_24543450_24543562_24545497_24545518_24545842
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037220	chr14	+	551	5	NNC	ENSMUSG00000025290.18	novel	1613	5	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	4804.45623223898	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	18	True	AATAAA	-17	NA	24540751	24545927	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_24540827_24541817_24541884_24541974_24542189_24543450_24543562_24545842
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037222	chr14	+	565	6	NIC	ENSMUSG00000025290.18	novel	525	7	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	3	88	junction_4	5809.14098985384	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	18	True	AATAAA	-17	NA	24540751	24545927	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24544119_24544138_24545842
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037252	chr14	+	2794	4	FSM	ENSMUSG00000025290.18	ENSMUST00000223939.2	2769	4	-11	-14	0	1	multi-exon	FALSE	canonical	3	9630	junction_1	1522.07774659071	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	18	True	AATAAA	-17	NA	24540785	24545927	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037254	chr14	+	528	5	NNC	ENSMUSG00000025290.18	novel	1613	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5247.91465131627	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	18	True	AATAAA	-17	NA	24540785	24545927	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543577_24545842
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037281	chr14	+	749	5	NNC	ENSMUSG00000025290.18	novel	714	6	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6209.44423338353	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	18	True	AATAAA	-17	NA	24540820	24545927	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_24541093_24541817_24541884_24541974_24542185_24543450_24543567_24545842
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037288	chr14	+	910	5	NIC	ENSMUSG00000025290.18	novel	714	6	NA	NA	-14	1	combination_of_known_junctions	FALSE	canonical	3	633	junction_1	5358.79562028633	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	18	True	AATAAA	-17	NA	24540820	24545927	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_+_24541259_24541817_24541884_24541974_24542185_24543450_24543562_24545842
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037292	chr14	+	963	6	NNC	ENSMUSG00000025290.18	novel	714	6	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5024.15598483964	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACACGTCTGCTCTGCTGCT	NA	False	NA	14	True	AATAAA	-13	NA	24540820	24545923	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_24541296_24541817_24541884_24541974_24542185_24543450_24543562_24545497_24545518_24545842
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037318	chr14	+	1580	6	FSM	ENSMUSG00000021868.8	ENSMUST00000022419.7	1549	6	-20	-11	-4	11	multi-exon	FALSE	canonical	3	443	junction_3	21.4532048887806	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTTGGAATGAAATTTAC	372	False	NA	NA	False	AATAAA	-29	NA	25694573	25700903	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_+_25694848_25695896_25695928_25696427_25696517_25697996_25698094_25698689_25698766_25699890
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037334	chr14	-	818	4	NNC	ENSMUSG00000095304.10	novel	1555	4	NA	NA	-35	384	at_least_one_novel_splicesite	TRUE	canonical	3	26	junction_3	82.174610839764	101	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGCATTTCCAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	25902935	25888443	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_25888951_25889319_25889444_25891184_25891280_25902843
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037357	chr14	-	527	4	NNC	ENSMUSG00000114753.2	novel	5711	2	NA	NA	5056	-171	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.55902608401044	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTGGCTTCATTCT	1657	False	NA	NA	False	NA	NA	NA	26041053	26036336	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_26036463_26036786_26036931_26040411_26040567_26040951
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037361	chr14	-	477	4	NNC	ENSMUSG00000114753.2	novel	5711	2	NA	NA	4998	-171	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	3.09120616516523	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTGGCTTCATTCT	1599	False	NA	NA	False	NA	NA	NA	26041111	26036336	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_26036463_26036786_26036931_26040411_26040567_26041059
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037387	chr14	-	2394	22	FSM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	692	4556	-35	-4556	multi-exon	FALSE	canonical	3	262	junction_6	31.5683759207952	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGCTTTCCTAAACAAGA	NA	False	NA	-1	True	AATAAA	-22	NA	26692497	26645500	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037449	chr14	+	204	1	Intergenic	novelGene_110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGTGGTTTAAAACAGAA	NA	False	NA	NA	False	NA	NA	NA	30259575	30259779	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr14_+_30259600_30259800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037471	chr14	+	470	3	NNC	ENSMUSG00000021957.8	novel	1401	8	NA	NA	1472	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1164	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCAGACTCTTTTTTTTT	NA	False	NA	38	True	AATATA	-21	NA	30293133	30295581	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_30293203_30294174_30294288_30295293
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037472	chr14	+	471	3	NNC	ENSMUSG00000021957.8	novel	1401	8	NA	NA	1472	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1106	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCAGACTCTTTTTTTTT	NA	False	NA	38	True	AATATA	-21	NA	30293133	30295581	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_30293203_30294164_30294288_30295302
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037480	chr14	+	290	1	NIC	ENSMUSG00000021957.8	novel	3223	14	NA	NA	3630	0	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCAGACTCTTTTTTTTT	NA	False	NA	38	True	AATATA	-21	NA	30295291	30295581	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_+_30295300_30295600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037503	chr14	+	898	5	ISM	ENSMUSG00000021918.11	ENSMUST00000227199.2	1317	6	2507	-4	2507	4	3prime_fragment	FALSE	canonical	3	40	junction_4	8.55496931613434	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAGTATTTTATTTGT	NA	False	NA	NA	False	GATAAA	-17	NA	30675979	30686279	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_+_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037513	chr14	-	956	4	FSM	ENSMUSG00000021917.17	ENSMUST00000228767.2	1008	4	57	-5	-6	5	multi-exon	FALSE	canonical	3	32	junction_2	828.969775618441	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTCTTTTTGCAGTG	NA	False	NA	1	True	AATAAA	-22	NA	30723572	30721777	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_-_30722180_30722634_30722718_30722800_30722861_30723161
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037554	chr14	-	1798	15	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	-21	0	combination_of_known_junctions	TRUE	canonical	3	108	junction_10	218.114789100808	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	False	NA	-1	True	AATAAA	-20	NA	30741022	30734389	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738350_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037577	chr14	-	301	1	NIC	ENSMUSG00000042354.8	novel	1765	15	NA	NA	821	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	False	NA	-1	True	AATAAA	-20	NA	30734690	30734389	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_-_30734400_30734700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037596	chr14	-	452	2	NNC	ENSMUSG00000058351.12	novel	426	2	NA	NA	4	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGTTTCTTAAAAATCTA	NA	False	NA	NA	False	TTTAAA	-6	NA	30850866	30846609	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_30846785_30850589
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037604	chr14	-	955	1	ISM	ENSMUSG00000021910.16	ENSMUST00000168206.8	4990	17	19646	0	1844	0	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTCTTCAAGGTTATA	NA	False	NA	-4	True	AATAAA	-17	NA	30893841	30892886	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_-_30892900_30893800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037608	chr14	-	610	4	NNC	ENSMUSG00000021910.16	novel	1763	3	NA	NA	0	5527	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	532.482863574031	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTCTCTGTGTTTTCTG	9422	False	NA	NA	False	ATTAAA	-18	NA	30928657	30917373	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_30917583_30925183_30925367_30926398_30926483_30928523
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037634	chr14	-	1976	6	FSM	ENSMUSG00000021891.9	ENSMUST00000055303.5	3946	6	-2	1972	-2	793	multi-exon	FALSE	canonical	3	247	junction_5	24.3359815910516	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTGAATGTGTTTGTTT	NA	False	NA	2	True	NA	NA	NA	31216999	31200748	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037659	chr14	+	1672	3	FSM	ENSMUSG00000021900.11	ENSMUST00000128014.2	689	3	40	-1023	11	-385	multi-exon	FALSE	canonical	2	5	junction_1	7.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATACTGGCTGGGTTTTTT	NA	False	NA	12	True	AATAAA	-28	NA	31363024	31390151	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_+_31363093_31387838_31387989_31388697
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037666	chr14	+	652	2	NNC	ENSMUSG00000046005.5	novel	3897	2	NA	NA	17492	-3052	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTGTTTTCTTCATCT	4910	False	NA	NA	False	NA	NA	NA	31645976	31650621	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_31646028_31650020
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037697	chr14	+	2027	8	FSM	ENSMUSG00000021906.15	ENSMUST00000022462.14	2376	8	350	-1	-22	1	multi-exon	FALSE	canonical	3	171	junction_6	23.2422908000191	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTTTAATGTTTCAGT	NA	False	NA	21	True	AATACA	-20	NA	31807719	31825160	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037705	chr14	-	442	2	NNC	ENSMUSG00000115760.2	novel	965	2	NA	NA	718	112	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTGTGTGAAAGAGTAAA	NA	False	NA	NA	False	NA	NA	NA	31877310	31876592	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_31876977_31877252
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037716	chr14	-	1140	7	NNC	ENSMUSG00000013701.14	novel	1173	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1572.23210931324	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTATCTCCATTTAATA	NA	False	NA	NA	False	AATAAA	-40	NA	31923828	31902118	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_31902628_31911106_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925_31920985_31923599
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037746	chr14	-	724	4	Fusion	ENSMUSG00000115691.2_ENSMUSG00000090459.2	novel	391	2	NA	NA	-10423	19	multi-exon	FALSE	canonical	2	7	junction_2	19.4422220952236	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCTTCTTCATTTTT	NA	False	NA	6	True	ATTAAA	-36	NA	32027354	32014861	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr14_-_32015223_32016561_32016674_32016882_32016987_32027207
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037759	chr14	-	492	2	Fusion	ENSMUSG00000115691.2_ENSMUSG00000090459.2	novel	391	2	NA	NA	-10422	4	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTGACAAAGTTTTTTT	NA	False	NA	-9	True	ATTAAA	-21	NA	32027353	32014876	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr14_-_32015223_32027207
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037784	chr14	+	287	1	Genic_Genomic	ENSMUSG00000021913.9	novel	NA	NA	NA	NA	22474	1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGCCTCCTTTCCTAC	NA	False	NA	13	True	AATAAA	-19	NA	32069822	32070109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_+_32069800_32070100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037801	chr14	+	1133	2	Genic_Genomic	ENSMUSG00000115214.2_ENSMUSG00000078126.5	novel	468	1	NA	NA	-12	136	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGATGGGAAAATAAAAGTAA	2262	False	NA	NA	False	AATAAA	-11	NA	33892599	34003272	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_+_33893242_34002781
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037817	chr14	-	578	4	NNC	ENSMUSG00000043681.6	novel	408	3	NA	NA	-66	1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	1190.11941511019	141	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGTTTACCTCTGTTT	NA	False	NA	-5	True	AATAAA	-22	NA	34077456	34073836	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_34074035_34075654_34075718_34076131_34076235_34077242
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037823	chr14	-	199	1	Genic_Genomic	ENSMUSG00000043681.6	novel	NA	NA	NA	NA	3355	1	mono-exon	FALSE	NA	NA	NA	NA	NA	1058	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGTTTACCTCTGTTT	NA	False	NA	-5	True	AATAAA	-22	NA	34074035	34073836	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_-_34073800_34074000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037843	chr14	-	655	3	NNC	ENSMUSG00000043681.6	novel	408	3	NA	NA	860	-4	at_least_one_novel_splicesite	FALSE	canonical	3	105	junction_2	1240	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTCCTGAGTTTACCTC	NA	False	NA	-10	True	AATAAA	-17	NA	34076530	34073841	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_34074035_34075654_34075718_34076131
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037872	chr14	+	244	1	Antisense	novelGene_ENSMUSG00000023064.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCAGTGTCCCAGGCTG	4150	False	NA	17	True	AAGAAA	-18	NA	34096681	34096925	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr14_+_34096700_34096900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037878	chr14	+	185	1	Intergenic	novelGene_111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTAAAAAAAAAATAGTGT	NA	False	NA	NA	False	NA	NA	NA	34217032	34217217	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr14_+_34217000_34217200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037882	chr14	+	530	2	Genic_Genomic	ENSMUSG00000115575.2	novel	998	1	NA	NA	277	2	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGCAGTCAGTCCTCA	5095	False	NA	NA	False	AATAAA	-18	NA	34383940	34384663	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_+_34384022_34384214
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037888	chr14	+	870	4	NNC	ENSMUSG00000041408.19	novel	1820	11	NA	NA	2082	0	intron_retention	FALSE	canonical	0	0	junction_1	503.779272653764	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGGTTGTTGTTCCCT	NA	False	NA	9	True	AATAAA	-21	NA	34461309	34468176	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_34461400_34463013_34463103_34466765_34466862_34467581
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037892	chr14	+	356	1	ISM	ENSMUSG00000041408.19	ENSMUST00000048263.14	6351	19	73700	0	10357	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTGTCTTTAACATAAG	NA	False	NA	14	True	AATAAA	-19	NA	34469584	34469940	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_+_34469600_34469900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000037996	chr14	-	384	1	Genic_Genomic	ENSMUSG00000021792.16	novel	NA	NA	NA	NA	8986	5	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTCTGTGCACAAGTTT	NA	False	NA	-17	True	AATAAA	-16	NA	40716075	40715691	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_-_40715700_40716100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038010	chr14	+	872	2	Antisense	novelGene_ENSMUSG00000092142.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAAGAATGTGTTTGTC	NA	False	NA	NA	False	AATAAA	-20	NA	41059304	41148278	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr14_+_41059403_41147504
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038030	chr14	+	872	1	Intergenic	novelGene_112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAAGAATGTGTTTGTC	9528	False	NA	NA	False	AATAAA	-20	NA	41147406	41148278	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr14_+_41147400_41148300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038050	chr14	+	992	4	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4479	-40010	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	91.9710099252295	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAAGTGAAGGCTCTTA	NA	False	NA	NA	False	ATTAAA	-28	NA	41761472	41785766	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_41761595_41761988_41762060_41765841_41766287_41785412
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038051	chr14	+	1879	7	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4479	0	intron_retention	TRUE	canonical	3	21	junction_4	63.0672040146241	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCACTCTTAAGAAACT	NA	False	NA	NA	False	AATAAA	-15	NA	41761472	41825778	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_41761595_41761988_41762060_41765841_41766287_41818127_41818291_41819245_41819378_41820058_41820240_41825013
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038106	chr14	+	1372	5	NNC	ENSMUSG00000115483.2	novel	1591	4	NA	NA	-3315	-336	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	16.5283846760656	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCACTCTTAAGAAACT	NA	False	NA	NA	False	AATAAA	-15	NA	43129177	43163125	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_43129304_43132676_43132821_43157302_43157435_43158114_43158297_43162337
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038149	chr14	+	198	1	Intergenic	novelGene_113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTTAACAAAAACTCTGA	NA	False	NA	NA	False	NA	NA	NA	45454678	45454876	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr14_+_45454700_45454900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038172	chr14	+	1543	13	NNC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	0	-631	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	492.430282713536	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTCTTGTCTTTTCTAA	NA	False	NA	31	True	AATAAA	-23	NA	45567284	45586531	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_45567390_45568286_45568387_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038214	chr14	-	102	1	Genic_Genomic	ENSMUSG00000037712.18	novel	NA	NA	NA	NA	18969	4	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTACTTCTGATCT	NA	False	NA	-1	True	AATAAA	-24	NA	45696349	45696247	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_-_45696200_45696300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038223	chr14	-	483	2	NNC	ENSMUSG00000115391.2	novel	1035	2	NA	NA	1827	-11	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACTGTACACCTTATTT	NA	False	NA	NA	False	ATTAAA	-22	NA	45790032	45789305	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_45789705_45789948
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038230	chr14	-	733	2	Antisense	novelGene_ENSMUSG00000044285.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	2094	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTTTATATATATTGGA	NA	False	NA	NA	False	NA	NA	NA	46322442	46321482	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr14_-_46321625_46321851
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038231	chr14	-	506	2	Antisense	novelGene_ENSMUSG00000044285.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	1119	junction_1	0	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTTTATATATATTGGA	NA	False	NA	NA	False	NA	NA	NA	46322443	46321482	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr14_-_46321625_46322079
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038236	chr14	+	504	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	-2	-15	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTCAAGAAGGTGGACTC	NA	False	NA	NA	False	AATAAA	-45	NA	46321482	46322442	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_46321631_46322086
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038238	chr14	+	735	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	-2	-12	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAGAAGGTGGACTCCAG	NA	False	NA	NA	False	NA	NA	NA	46321482	46322445	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_46321631_46321858
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038247	chr14	-	725	2	Antisense	novelGene_ENSMUSG00000044285.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	2231	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTTTATATATATTGGA	NA	False	NA	NA	False	NA	NA	NA	46322434	46321482	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr14_-_46321853_46322079
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038314	chr14	-	1481	7	ISM	ENSMUSG00000037572.18	ENSMUST00000187531.8	4260	25	28971	0	-2591	0	3prime_fragment	FALSE	canonical	3	309	junction_2	30.8094502096714	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCTTGCTATGGTTT	NA	False	NA	0	True	AATAAA	-20	NA	47485318	47478400	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038359	chr14	-	1293	1	ISM	ENSMUSG00000037526.8	ENSMUST00000226299.2	3729	11	28464	0	18454	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGTGTGTGTCTGTC	NA	False	NA	-4	True	AATAAA	-14	NA	47779642	47778349	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_-_47778300_47779600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038367	chr14	+	359	2	ISM	ENSMUSG00000021843.18	ENSMUST00000190252.7	4436	41	0	72572	0	-330	5prime_fragment	FALSE	canonical	3	625	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAATGGGACCCTTCGT	NA	False	NA	NA	False	AAAACA	-44	NA	47886767	47901442	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_+_47886897_47901212
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038373	chr14	+	1133	9	ISM	ENSMUSG00000021843.18	ENSMUST00000185343.7	3846	38	53124	-273	2234	0	3prime_fragment	FALSE	canonical	3	405	junction_5	199.567501111779	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47954367	47974021	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_+_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038374	chr14	+	1205	10	ISM	ENSMUSG00000021843.18	ENSMUST00000188553.7	3918	39	53124	-273	2234	0	3prime_fragment	FALSE	canonical	3	329	junction_5	223.090802528566	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47954367	47974021	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_+_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038387	chr14	-	2634	2	Antisense	novelGene_ENSMUSG00000098192.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGACTCTTTTCTTCAAG	NA	False	NA	NA	False	NA	NA	NA	48647272	48464588	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr14_-_48465896_48645945
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038391	chr14	+	122	1	ISM	ENSMUSG00000021846.10	ENSMUST00000073150.6	5900	6	135880	4064	57987	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATCTCAACTGCCATGC	NA	False	NA	NA	False	ATTAAA	-21	NA	48494159	48494281	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_+_48494200_48494300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038395	chr14	-	677	1	ISM	ENSMUSG00000021848.17	ENSMUST00000226501.2	2592	6	9162	0	3579	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGGTCTAGTTTAATTT	NA	False	NA	-1	True	ATTAAA	-16	NA	48895810	48895133	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_-_48895100_48895800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038436	chr14	-	500	1	ISM	ENSMUSG00000071470.5	ENSMUST00000095932.5	1509	4	5980	1	5980	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTCTTTTCTTTTTGG	NA	False	NA	0	True	AATAAA	-19	NA	51027205	51026705	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_-_51026700_51027200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038438	chr14	-	1507	4	FSM	ENSMUSG00000071470.5	ENSMUST00000095932.5	1509	4	1	1	1	-1	multi-exon	FALSE	canonical	3	174	junction_1	17.4419672692682	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTCTTTTCTTTTTGG	8877	False	NA	0	True	AATAAA	-19	NA	51033184	51026705	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_-_51027470_51029429_51029764_51031014_51031332_51033092
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038453	chr14	-	1332	2	NNC	ENSMUSG00000071470.5	novel	444	3	NA	NA	5076	-4309	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTATGAGTTGTTCTT	1948	False	NA	0	True	AATAAA	-16	NA	51040113	51035570	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_51036656_51039866
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038456	chr14	-	1088	1	NIC	ENSMUSG00000071470.5	novel	444	3	NA	NA	-3473	-4309	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTATGAGTTGTTCTT	5403	False	NA	0	True	AATAAA	-16	NA	51036658	51035570	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_-_51035600_51036700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038463	chr14	-	370	1	Intergenic	novelGene_114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGTGTTTTTTTTTTTG	1962	False	NA	NA	False	NA	NA	NA	51040099	51039729	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr14_-_51039700_51040100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038494	chr14	-	185	1	Intergenic	novelGene_115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTAATTAATTAATTGT	4427	False	NA	NA	False	NA	NA	NA	51142357	51142172	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr14_-_51142200_51142400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038514	chr14	-	219	1	NIC	ENSMUSG00000006289.15	novel	2004	12	NA	NA	1474	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTTGTGTTTTTCAGTT	NA	False	NA	-1	True	AATAAA	-24	NA	51153357	51153138	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_-_51153100_51153400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038530	chr14	+	1250	5	NNC	ENSMUSG00000035960.15	novel	655	5	NA	NA	-10	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	499.206119754155	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTCTTTGTCCCTTTGTG	169	False	NA	19	True	AATAAA	-20	NA	51162414	51164601	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_51162492_51162678_51162782_51162973_51163162_51163617_51163811_51163912
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038539	chr14	+	1401	4	NNC	ENSMUSG00000035960.15	novel	1239	5	NA	NA	21	0	intron_retention	FALSE	canonical	0	0	junction_1	540.254261127727	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTTCTTTGTCCCT	210	False	NA	14	True	AATAAA	-15	NA	51162455	51164596	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_51162492_51162673_51163162_51163617_51163811_51163912
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038670	chr14	-	1363	9	NNC	ENSMUSG00000060373.16	novel	1683	9	NA	NA	7	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1440.20475432315	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTCCAAAATAATCTCT	8732	False	NA	46	True	AATAAA	-22	NA	52341478	52312251	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319280_52319361_52321571_52321849_52335471_52335498_52341345
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038671	chr14	-	1366	9	NNC	ENSMUSG00000060373.16	novel	1691	9	NA	NA	7	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1314.26994943961	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTCCAAAATAATCTCT	8732	False	NA	46	True	AATAAA	-22	NA	52341478	52312251	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319280_52319361_52321571_52321849_52335471_52335498_52341345
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038687	chr14	-	1318	8	NNC	ENSMUSG00000060373.16	novel	2498	9	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1346.70374603765	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTCCAAAATAATCTCT	8754	False	NA	46	True	AATAAA	-22	NA	52341456	52312251	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318712_52318765_52319284_52319361_52321571_52321849_52341345
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038732	chr14	-	183	1	Intergenic	novelGene_116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTCCTGGGAATTTCTG	2096	False	NA	NA	False	NA	NA	NA	52367612	52367429	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr14_-_52367400_52367600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038749	chr14	-	2709	8	FSM	ENSMUSG00000022159.17	ENSMUST00000022765.14	2906	8	191	6	-15	1	multi-exon	FALSE	canonical	3	132	junction_5	9.75202752335772	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTATTTCATGTGTCATT	NA	False	NA	-5	True	ATTAAA	-21	NA	52516811	52499221	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_-_52501275_52502155_52502225_52503646_52503759_52506098_52506192_52506374_52506458_52512899_52512968_52516370_52516443_52516652
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038780	chr14	+	528	1	FSM	ENSMUSG00000096681.2	ENSMUST00000168472.3	438	1	-36	-54	-36	54	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATAGGATCCTATCTGTA	7898	False	NA	NA	False	AATAAA	-31	NA	53451150	53451678	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_+_53451200_53451700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038796	chr14	-	230	1	ISM	ENSMUSG00000022174.9	ENSMUST00000022781.8	878	3	18391	5	18201	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATTCGTTCCTTCATGT	NA	False	NA	-16	True	ATTAAA	-19	NA	54473170	54472940	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_-_54472900_54473200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038835	chr14	+	749	1	ISM	ENSMUSG00000000959.8	ENSMUST00000000985.7	2538	10	7864	220	1074	-220	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTATTGTTTTGCATC	2560	False	NA	13	True	AATAAA	-25	NA	54606161	54606910	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_+_54606200_54606900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038851	chr14	+	427	5	NNC	ENSMUSG00000010406.13	novel	418	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	593.889088972007	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTCTGGCTTTCTTTTC	NA	False	NA	27	True	AATAAA	-28	NA	54664360	54667213	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_54664418_54664490_54664549_54664627_54664696_54666040_54666110_54667038
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038857	chr14	+	493	4	FSM	ENSMUSG00000010406.13	ENSMUST00000199195.3	463	4	-23	-7	-2	0	multi-exon	FALSE	canonical	3	1331	junction_1	96.858430482615	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTCTGGCTTTCTTTTC	NA	False	NA	27	True	AATAAA	-28	NA	54664363	54667213	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_+_54664549_54664627_54664696_54666040_54666106_54667038
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038864	chr14	+	292	3	NIC	ENSMUSG00000010406.13	novel	418	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	761.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTCTGGCTTTCTTTTC	NA	False	NA	27	True	AATAAA	-28	NA	54664365	54667213	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_+_54664418_54666040_54666106_54667038
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038866	chr14	+	346	4	NIC	ENSMUSG00000010406.13	novel	418	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	569.091088198248	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGACTCTCTCTGGCTT	NA	False	NA	20	True	AATAAA	-21	NA	54664365	54667206	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_+_54664418_54664490_54664549_54664627_54664696_54667038
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038902	chr14	+	1340	3	ISM	ENSMUSG00000022175.10	ENSMUST00000022782.10	4228	7	4451	1217	-225	537	3prime_fragment	FALSE	canonical	3	186	junction_1	24	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGGTAAATCAGCTGT	NA	False	NA	4	True	AATAAA	-17	NA	54706044	54707737	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_+_54706239_54706492_54706623_54706721
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038906	chr14	+	469	1	ISM	ENSMUSG00000022175.10	ENSMUST00000022782.10	4228	7	5675	1217	999	537	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGGTAAATCAGCTGT	NA	False	NA	4	True	AATAAA	-17	NA	54707268	54707737	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_+_54707300_54707700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038925	chr14	-	357	1	Genic_Genomic	ENSMUSG00000022193.8	novel	NA	NA	NA	NA	3540	7	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCACAGTTATTTCAGTGC	NA	False	NA	-10	True	AATAAA	-25	NA	54851925	54851568	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_-_54851600_54851900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000038969	chr14	+	943	1	Genic_Genomic	ENSMUSG00000040822.8	novel	NA	NA	NA	NA	2758	3	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGGTGATTCACATTGT	2427	False	NA	NA	False	AATAAA	-29	NA	54927258	54928201	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_+_54927300_54928200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039040	chr14	+	152	1	Genic_Genomic	ENSMUSG00000022204.10	novel	NA	NA	NA	NA	2565	1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTTTTGCCATACATT	NA	False	NA	19	True	AATAAA	-24	NA	55261443	55261595	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_+_55261400_55261600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039045	chr14	+	213	1	Intergenic	novelGene_117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTTGTTGACCTGTCCAG	NA	False	NA	NA	False	AATAAA	-21	NA	55261638	55261851	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr14_+_55261600_55261900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039112	chr14	+	374	1	NIC	ENSMUSG00000022216.18	novel	1112	11	NA	NA	407	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTCTTTATTGTATG	NA	False	NA	14	True	AATAAA	-18	NA	55818611	55818985	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_+_55818600_55819000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039128	chr14	-	843	11	NNC	ENSMUSG00000079197.11	novel	962	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_8	302.439679936347	51	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGTGTTGTTCATTGA	NA	False	NA	NA	False	AATAAA	-21	NA	55828428	55824897	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_55825023_55825110_55825198_55825496_55825552_55825689_55825758_55825900_55825970_55826757_55826856_55826937_55826969_55827075_55827160_55827489_55827553_55827951_55827985_55828298
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039159	chr14	+	827	7	ISM	ENSMUSG00000047098.19	ENSMUST00000133903.3	4939	15	8158	-6	-117	3	3prime_fragment	FALSE	canonical	3	183	junction_1	12.3749298538977	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGGTCCTTCTTCCTG	NA	False	NA	21	True	AATAAA	-24	NA	55838495	55841133	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_+_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039175	chr14	-	1735	6	FSM	ENSMUSG00000002329.8	ENSMUST00000002400.7	1733	6	-2	0	-2	0	multi-exon	FALSE	canonical	3	347	junction_4	50.5750926840476	1242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTAAGCTGTATCTG	2283	False	NA	-8	True	AATAAA	-29	NA	55897967	55895335	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897556_55897624_55897686_55897794
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039188	chr14	-	369	1	Genic_Genomic	ENSMUSG00000010376.16	novel	NA	NA	NA	NA	1236	6	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTCTTCTTGACACAAA	168	False	NA	-5	True	AATAAA	-21	NA	55900082	55899713	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_-_55899700_55900100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039249	chr14	-	1862	8	FSM	ENSMUSG00000007589.10	ENSMUST00000228264.2	3130	8	-22	1290	-4	1105	multi-exon	FALSE	canonical	3	280	junction_5	42.7532073030068	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAGGTCATTCCTCCGA	NA	False	NA	-25	True	AATAAA	-15	NA	55919265	55916558	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039301	chr14	-	1894	10	FSM	ENSMUSG00000022221.15	ENSMUST00000022830.14	1892	10	-2	0	-2	0	multi-exon	FALSE	canonical	3	118	junction_2	8.73194786861711	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTCTGAGGTGTCAATC	NA	False	NA	-1	True	AATAAA	-20	NA	56026324	56022451	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024382_56024570_56024618_56024738_56024897_56025280_56025591_56025694_56025839_56026073
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039309	chr14	+	456	1	Intergenic	novelGene_118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTCGTCTGAGAGCTTT	NA	False	NA	NA	False	NA	NA	NA	56057595	56058051	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr14_+_56057600_56058100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039315	chr14	-	1277	6	FSM	ENSMUSG00000022223.10	ENSMUST00000111325.5	1255	6	0	-22	0	22	multi-exon	FALSE	canonical	3	98	junction_5	35.4547599061113	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTATATTCCCCTAGAA	NA	False	NA	16	True	AATAAA	-42	NA	56137715	56134717	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_-_56135470_56135699_56135844_56136640_56136763_56137103_56137187_56137270_56137378_56137646
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039324	chr14	-	1125	5	NIC	ENSMUSG00000022223.10	novel	1255	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	74.2866071374915	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTTCCGCTGTCTC	NA	False	NA	-6	True	AATAAA	-20	NA	56137668	56134739	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_-_56135470_56135699_56135844_56136640_56136763_56137270_56137378_56137646
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039335	chr14	-	1196	6	NNC	ENSMUSG00000022223.10	novel	1255	6	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	68.2483699439042	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCACTGGCTTCCGCTGTC	NA	False	NA	-8	True	AATAAA	-18	NA	56137668	56134741	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_56135470_56135709_56135844_56136640_56136763_56137103_56137187_56137270_56137378_56137646
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039389	chr14	+	278	1	ISM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	28905	0	3729	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTACTAGTCGTTGTGA	5444	False	NA	32	True	ATTAAA	-18	NA	56934609	56934887	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_+_56934600_56934900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039392	chr14	-	839	1	ISM	ENSMUSG00000021938.13	ENSMUST00000022507.13	4114	9	55037	1731	38588	1545	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGAAAGTAAATCTCTT	NA	False	NA	0	True	AATAAA	-22	NA	56960736	56959897	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_-_56959900_56960700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039407	chr14	+	810	3	Intergenic	novelGene_119	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTCATGTTGAATTCT	NA	False	NA	NA	False	AATAAA	-15	NA	57240304	57242445	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr14_+_57240393_57241366_57241670_57242026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039438	chr14	-	848	5	NNC	ENSMUSG00000021951.8	novel	880	5	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	107.885066158389	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTCATGAGGTTGAGAT	NA	False	NA	-7	True	AATAAA	-21	NA	57809039	57787052	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_57787337_57787818_57788100_57795490_57795574_57803378_57803535_57808995
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039473	chr14	+	1861	5	NNC	ENSMUSG00000021963.18	novel	5125	4	NA	NA	-1	1137	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1278.09944350978	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGAGTGACTGCCTATC	NA	False	NA	NA	False	NA	NA	NA	58035673	58040929	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378_58040736_58040796
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039494	chr14	-	559	1	Genic_Genomic	ENSMUSG00000021965.4	novel	NA	NA	NA	NA	3180	5	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTTGCCAACTCTGAAA	NA	False	NA	-2	True	AATAAA	-24	NA	58044571	58044012	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_-_58044000_58044600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039521	chr14	+	226	1	Intergenic	novelGene_120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGTTAAAAAGCTTTTT	NA	False	NA	NA	False	NA	NA	NA	58157627	58157853	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr14_+_58157600_58157900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039545	chr14	-	1306	8	NNC	ENSMUSG00000068245.15	novel	1281	8	NA	NA	-5085	1	intron_retention	FALSE	canonical	3	27	junction_1	121.308175608191	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGTGCACCGTTTATT	NA	False	NA	0	True	AATAAA	-17	NA	59608004	59586179	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_59586838_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039555	chr14	-	1336	11	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5085	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	111.406283485268	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	-1	True	AATAAA	-16	NA	59608004	59586180	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_59586501_59586670_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592591_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039556	chr14	-	1969	7	ISM	ENSMUSG00000068245.15	ENSMUST00000095157.11	2666	11	9185	1325	9125	0	3prime_fragment	FALSE	canonical	3	278	junction_1	38.602317144038	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	4234	False	NA	-1	True	AATAAA	-16	NA	59593734	59586180	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_-_59586501_59586670_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039562	chr14	-	1330	11	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5079	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	111.176481325863	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	-1	True	AATAAA	-16	NA	59607998	59586180	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_59586501_59586670_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599298_59607898
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039575	chr14	-	1500	10	NNC	ENSMUSG00000068245.15	novel	1130	10	NA	NA	-5079	0	intron_retention	FALSE	canonical	0	0	junction_5	116.794215990728	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	-1	True	AATAAA	-16	NA	59607998	59586180	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592591_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039578	chr14	-	1431	9	NNC	ENSMUSG00000068245.15	novel	1130	10	NA	NA	-5079	0	intron_retention	FALSE	canonical	3	19	junction_1	116.070829668785	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	-1	True	AATAAA	-16	NA	59607998	59586180	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_59586838_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039618	chr14	+	1063	9	ISM	ENSMUSG00000021993.11	ENSMUST00000063562.9	3015	19	42847	616	42782	-616	3prime_fragment	FALSE	canonical	3	230	junction_2	21.9031961138095	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTCTCACCTGCTTGGC	NA	False	NA	NA	False	AATAAA	-20	NA	61064868	61141062	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_+_61064902_61066835_61066914_61068561_61068767_61071433_61071544_61080656_61080732_61083832_61083953_61109466_61109589_61112682_61112757_61140816
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039670	chr14	-	403	1	NIC	ENSMUSG00000021930.15	novel	4002	5	NA	NA	21516	-535	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGATTATTTTTTTGT	NA	False	NA	1	True	TATAAA	-22	NA	61772691	61772288	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_-_61772300_61772700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039679	chr14	+	1504	2	Genic_Genomic	ENSMUSG00000114902.2	novel	864	1	NA	NA	-1785	206	multi-exon	FALSE	canonical	2	2	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGGTCACATCTTTAAT	NA	False	NA	NA	False	ATTAAA	-26	NA	61794461	61797316	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_+_61794890_61796240
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039688	chr14	+	1107	1	ISM	ENSMUSG00000035235.14	ENSMUST00000165015.9	1619	3	6593	0	5300	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGAGTTTGTGCTGTG	NA	False	NA	18	True	AATAAA	-16	NA	61842288	61843395	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_+_61842300_61843400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039699	chr14	+	682	2	Intergenic	novelGene_121	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGCTATTGATATGTAC	NA	False	NA	NA	False	AATAAA	-17	NA	61944469	61945627	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr14_+_61944729_61945204
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039722	chr14	+	877	10	NNC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	25	-481	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	300.126269722891	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTGCCTATTCTG	NA	False	NA	15	True	AATAAA	-24	NA	62569541	62609960	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_62569626_62584016_62584092_62587848_62587926_62590971_62591087_62597914_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039723	chr14	+	990	11	NNC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	25	-481	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	255.728156447428	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTGCCTATTCTG	NA	False	NA	15	True	AATAAA	-24	NA	62569541	62609960	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597979_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039727	chr14	+	1167	10	ISM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	25	2109	25	-2109	5prime_fragment	TRUE	canonical	3	538	junction_2	119.060623628324	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGCGTTCTCCTGCAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	62569541	62608332	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039728	chr14	+	984	11	NNC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	25	-481	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	249.716819617742	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTGCCTATTCTG	NA	False	NA	15	True	AATAAA	-24	NA	62569541	62609960	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601565_62602715_62602751_62607920_62608002_62609808
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039729	chr14	+	982	11	NNC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	25	-481	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	253.549995070006	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTGCCTATTCTG	NA	False	NA	15	True	AATAAA	-24	NA	62569541	62609960	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_62569626_62584016_62584092_62585975_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039730	chr14	+	817	9	NIC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	25	-481	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	270.588912143495	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTGCCTATTCTG	NA	False	NA	15	True	AATAAA	-24	NA	62569541	62609960	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039731	chr14	+	874	10	NNC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	25	-481	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	302.781712512659	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTGCCTATTCTG	NA	False	NA	15	True	AATAAA	-24	NA	62569541	62609960	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_62569626_62584016_62584092_62587848_62587926_62590977_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039757	chr14	+	914	10	ISM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	14490	481	-741	-481	3prime_fragment	FALSE	canonical	3	538	junction_1	118.814306824443	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTGCCTATTCTG	NA	False	NA	15	True	AATAAA	-24	NA	62584006	62609960	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_+_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039770	chr14	+	570	4	NIC	ENSMUSG00000054763.10	novel	618	3	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	14.3527000944073	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCGTTTCAAATTCACC	NA	False	NA	28	True	AATAAA	-37	NA	63284397	63286059	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_+_63284500_63284892_63285068_63285676_63285752_63285841
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039826	chr14	-	1432	1	Genic_Genomic	ENSMUSG00000021953.15	novel	NA	NA	NA	NA	4291	930	mono-exon	FALSE	NA	NA	NA	NA	NA	866	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTTTTCCAGTATATTA	NA	False	NA	0	True	NA	NA	NA	63730297	63728865	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_-_63728900_63730300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039836	chr14	-	1554	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1077.25100806404	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTTTTACTTAGGATT	NA	False	NA	-16	True	ATTAAA	-18	NA	63746218	63729795	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737762_63746154
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039852	chr14	-	1642	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	1155	0	at_least_one_novel_splicesite	FALSE	canonical	3	154	junction_8	1027.11737857705	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTTTTACTTAGGATT	NA	False	NA	-16	True	ATTAAA	-18	NA	63745050	63729795	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63744906
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039882	chr14	-	1442	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-13	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1043.90932915651	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGAGACTTATTCTCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	63746218	63729906	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_63730291_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039886	chr14	-	1436	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-12	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1077.25100806404	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGAGACTTATTCTCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	63746217	63729906	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746168
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039889	chr14	-	1450	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-12	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1079.59586622727	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGAGACTTATTCTCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	63746217	63729906	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733434_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039916	chr14	-	275	2	Genic_Genomic	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-12	-3242	multi-exon	TRUE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTGCACTGTCATGCA	NA	False	NA	NA	False	NA	NA	NA	63746217	63744546	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_-_63744757_63746152
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039918	chr14	-	367	3	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-12	-3242	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_2	12	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTGCACTGTCATGCA	NA	False	NA	NA	False	NA	NA	NA	63746217	63744546	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_63744762_63745124_63745218_63746158
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039935	chr14	-	1344	6	ISM	ENSMUSG00000054733.10	ENSMUST00000067927.9	1860	11	14984	-4	-2	4	3prime_fragment	FALSE	canonical	3	54	junction_3	9.47839648885823	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCTGCTGTGAGTCTGTC	NA	False	NA	0	True	AATAAA	-24	NA	64678368	64360069	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_-_64360803_64447876_64447984_64471277_64471383_64522512_64522633_64551135_64551205_64678158
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039952	chr14	+	2677	17	FSM	ENSMUSG00000021975.10	ENSMUST00000239450.2	2677	17	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_12	28.2795752266543	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTTCTATTGCACTACA	NA	False	NA	20	True	AATAAA	-20	NA	65187493	65277284	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_+_65187817_65217570_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65244816_65245439_65245575_65253978_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269668_65269794_65271376_65271545_65273846_65273946_65274794_65274933_65276721
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039980	chr14	+	1117	8	NNC	ENSMUSG00000061356.14	novel	2745	19	NA	NA	20067	20	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	14.4094640101991	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTATCATTTTCTTC	6283	False	NA	NA	False	TATAAA	-21	NA	65862782	65885913	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_65862807_65872451_65872617_65875999_65876158_65877431_65877571_65878687_65878797_65879306_65879444_65882458_65882550_65885619
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000039986	chr14	+	743	1	ISM	ENSMUSG00000022032.15	ENSMUST00000022610.15	3794	9	97681	0	87607	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGCTGATAAGTGGTCCA	NA	False	NA	NA	False	AATAAA	-19	NA	66001532	66002275	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_+_66001500_66002300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040024	chr14	+	1173	1	FSM	ENSMUSG00000068165.4	ENSMUST00000089275.4	628	1	-145	-400	-145	400	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAGGAGGCTCTTTCTTG	1289	False	NA	NA	False	AATAAA	-44	NA	66282383	66283556	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_+_66282400_66283600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040046	chr14	-	231	1	ISM	ENSMUSG00000022051.16	ENSMUST00000111115.8	3259	7	23386	1	4371	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGTCCATATATCATTT	NA	False	NA	-13	True	ATTAAA	-15	NA	67222919	67222688	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_-_67222700_67222900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040060	chr14	-	2410	10	FSM	ENSMUSG00000022052.10	ENSMUST00000089230.7	4010	10	-11	1611	-11	7	multi-exon	FALSE	canonical	3	602	junction_4	68.1900032498157	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTTTCTTTTTCTTTT	NA	False	NA	2	True	AATAAA	-20	NA	67309904	67253115	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040063	chr14	+	427	3	Intergenic	novelGene_122	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGCATTCTTTATCCTTA	NA	False	NA	NA	False	AATAAA	-22	NA	67421832	67433924	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr14_+_67421894_67422521_67422651_67433687
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040097	chr14	-	556	1	ISM	ENSMUSG00000034190.10	ENSMUST00000224964.2	3348	4	3681	0	3681	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGTTGTTGTCTATTC	NA	False	NA	-2	True	ATTAAA	-15	NA	69955004	69954448	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_-_69954400_69955000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040125	chr14	-	535	1	ISM	ENSMUSG00000033644.6	ENSMUST00000048129.6	4916	23	56083	0	56053	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGTCTGAGAGAATATT	9510	False	NA	-14	True	AATAAA	-18	NA	70610460	70609925	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_-_70609900_70610500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040129	chr14	-	2049	9	FSM	ENSMUSG00000000776.14	ENSMUST00000000793.13	2016	9	-24	-9	-24	9	multi-exon	FALSE	canonical	3	137	junction_3	16.2244992218558	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTCTGCTCACATCCCT	1707	False	NA	2	True	AATAAA	-26	NA	70680911	70676187	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_-_70677019_70677157_70677311_70677453_70677720_70678038_70678208_70678476_70678602_70678743_70678896_70679791_70679836_70680390_70680561_70680772
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040147	chr14	+	401	1	ISM	ENSMUSG00000022096.15	ENSMUST00000022691.14	5487	20	19092	0	17248	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTTCCGAGCATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	70810587	70810988	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_+_70810600_70811000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040162	chr14	-	1705	5	FSM	ENSMUSG00000022101.7	ENSMUST00000227123.2	1336	5	-63	-306	-49	0	multi-exon	FALSE	canonical	3	35	junction_3	9.90896059130321	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGGTCCGCTGAAGAAAGG	NA	False	NA	0	True	AATAAA	-16	NA	70879757	70873642	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_-_70874464_70875906_70876014_70876241_70876387_70878971_70879009_70879162
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040180	chr14	+	192	1	Intergenic	novelGene_123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATATATCTCCTTACCTA	NA	False	NA	NA	False	NA	NA	NA	70998291	70998483	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr14_+_70998300_70998500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040184	chr14	+	663	3	NNC	ENSMUSG00000090216.2	novel	503	2	NA	NA	-3982	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTGTATAGTTTGTGA	NA	False	NA	NA	False	AATGAA	-21	NA	72823209	72840811	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_72823328_72827153_72827269_72840381
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040190	chr14	-	1399	2	NNC	ENSMUSG00000033470.13	novel	1744	5	NA	NA	-4946	9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATATATTTTTAGTGGT	NA	False	NA	NA	False	AATAAA	-20	NA	73268545	73266558	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_-_73267920_73268507
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040208	chr14	+	211	1	Intergenic	novelGene_124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGAGATCAGTTTCTCTA	NA	False	NA	NA	False	NA	NA	NA	73681850	73682061	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr14_+_73681800_73682100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040211	chr14	+	1676	7	FSM	ENSMUSG00000022109.7	ENSMUST00000022705.7	1328	7	-34	-314	-34	10	multi-exon	FALSE	canonical	3	317	junction_6	14.7356333046425	754	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTCTCTGAGATCATTA	NA	False	NA	NA	False	AATAAA	-27	NA	73747430	73756299	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_+_73747626_73748594_73748662_73751244_73751416_73752729_73752788_73754075_73754163_73754646_73754779_73755333
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040235	chr14	+	921	2	FSM	ENSMUSG00000022110.14	ENSMUST00000162723.2	1074	2	154	-1	20	1	multi-exon	FALSE	canonical	1	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATGTGTAGTACCAGCA	NA	False	NA	NA	False	AATAAA	-16	NA	73790225	73794268	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_+_73790338_73793459
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040236	chr14	+	1621	11	NNC	ENSMUSG00000022110.14	novel	2229	11	NA	NA	20	-132	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	494.517583104989	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGGTCTCTTTTCTTGCA	NA	False	NA	18	True	TATAAA	-21	NA	73790225	73833091	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830197_73831116_73831206_73832813
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040237	chr14	+	1555	12	NIC	ENSMUSG00000022110.14	novel	1545	12	NA	NA	20	5	combination_of_known_junctions	FALSE	canonical	2	11	junction_11	474.427937382059	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTATTCTTTAGTATAAA	NA	False	NA	NA	False	AATAAA	-18	NA	73790225	73833228	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813_73832914_73833112
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040238	chr14	+	1612	11	NNC	ENSMUSG00000022110.14	novel	2229	11	NA	NA	20	-132	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	497.739128459879	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGGTCTCTTTTCTTGCA	NA	False	NA	18	True	TATAAA	-21	NA	73790225	73833091	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_73790338_73797880_73798062_73806073_73806174_73806306_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040273	chr14	-	1134	2	Genic_Genomic	ENSMUSG00000075581.6	novel	747	1	NA	NA	-177126	52	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAACTATGGCAAGTAGT	NA	False	NA	NA	False	AATAAA	-28	NA	74211856	74033931	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_-_74034813_74211603
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040277	chr14	-	1182	2	Genic_Genomic	ENSMUSG00000075581.6	novel	747	1	NA	NA	-177126	52	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAACTATGGCAAGTAGT	NA	False	NA	NA	False	AATAAA	-28	NA	74211856	74033931	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_-_74034861_74211603
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040281	chr14	-	1132	2	Genic_Genomic	ENSMUSG00000075581.6	novel	747	1	NA	NA	-177126	51	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGTAACTATGGCAAGTAG	NA	False	NA	NA	False	AATAAA	-27	NA	74211856	74033932	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_-_74034780_74211571
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040283	chr14	-	164	1	FSM	ENSMUSG00000075581.6	ENSMUST00000100510.6	747	1	618	-35	618	35	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATCTTTAAAAAAAAATAG	NA	False	NA	NA	False	AATAAA	-11	NA	74034112	74033948	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_-_74033900_74034100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040292	chr14	+	1082	9	NNC	ENSMUSG00000021996.17	novel	1988	9	NA	NA	0	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	581.185426520659	98	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTATTTTACCACCATTC	NA	False	NA	23	True	AATAAA	-24	NA	74969736	74987298	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_74969829_74973402_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983162_74987084
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040315	chr14	+	1151	9	NIC	ENSMUSG00000021996.17	novel	1117	9	NA	NA	7	10	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	570.76329101914	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTATTTTACCACCATTC	NA	False	NA	23	True	AATAAA	-24	NA	74969803	74987298	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_+_74969962_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983162_74987084
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040330	chr14	-	585	2	Antisense	novelGene_ENSMUSG00000034959.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAAATACTGTGTTGG	NA	False	NA	NA	False	TTTAAA	-4	NA	75304596	75285366	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr14_-_75285810_75304454
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040332	chr14	+	180	1	Intergenic	novelGene_125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGTTTGTTGTGTTCTT	131	False	NA	NA	False	NA	NA	NA	75331915	75332095	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr14_+_75331900_75332100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040345	chr14	-	2622	10	FSM	ENSMUSG00000022003.8	ENSMUST00000022580.8	3588	10	32	934	0	-934	multi-exon	FALSE	canonical	3	23	junction_9	8.56348838577675	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTAATTAAAATTC	NA	False	NA	NA	False	AAAAAG	-5	NA	76024445	75998490	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_-_76000131_76000768_76000850_76004342_76004482_76006255_76006381_76007005_76007102_76007610_76007697_76008878_76008974_76012434_76012583_76014435_76014567_76024364
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040365	chr14	+	827	6	NNC	ENSMUSG00000060126.15	novel	1169	6	NA	NA	-4	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2163.72133141031	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCTTTGCTGTGATTGT	1072	False	NA	10	True	AATAAA	-21	NA	76082766	76085743	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_76082897_76083056_76083131_76083642_76083834_76084133_76084240_76084683_76084805_76085538
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040370	chr14	+	811	6	NNC	ENSMUSG00000060126.15	novel	1169	6	NA	NA	-4	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2213.06731935565	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCTTTGCTGTGATTGT	1072	False	NA	10	True	AATAAA	-21	NA	76082766	76085743	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_76082897_76083056_76083119_76083642_76083834_76084133_76084240_76084683_76084801_76085538
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040372	chr14	+	795	6	NNC	ENSMUSG00000060126.15	novel	1169	6	NA	NA	-4	6	at_least_one_novel_splicesite	FALSE	canonical	2	50	junction_4	2166.61306190099	113	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCTTTGCTGTGATTGT	1072	False	NA	10	True	AATAAA	-21	NA	76082766	76085743	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_76082897_76083056_76083131_76083642_76083834_76084133_76084240_76084711_76084801_76085538
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040375	chr14	+	815	6	NNC	ENSMUSG00000060126.15	novel	1169	6	NA	NA	-4	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2213.06731935565	68	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCTTTGCTGTGATTGT	1072	False	NA	10	True	AATAAA	-21	NA	76082766	76085743	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_76082897_76083056_76083131_76083650_76083834_76084133_76084240_76084683_76084801_76085538
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040392	chr14	+	705	5	NIC	ENSMUSG00000060126.15	novel	1169	6	NA	NA	-3	6	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	2327.03506365933	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCTTTGCTGTGATTGT	1073	False	NA	10	True	AATAAA	-21	NA	76082767	76085743	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_+_76082897_76083056_76083131_76083642_76083834_76084133_76084240_76085538
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040402	chr14	+	770	6	NNC	ENSMUSG00000060126.15	novel	1169	6	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2181.31156875858	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCTTTGCTGTGATTGT	1076	False	NA	10	True	AATAAA	-21	NA	76082770	76085743	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_76082897_76083056_76083131_76083642_76083810_76084158_76084240_76084683_76084801_76085538
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040412	chr14	+	789	6	NNC	ENSMUSG00000060126.15	novel	1169	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2181.31156875858	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGAACTCTTTGCTGTG	1076	False	NA	5	True	AATAAA	-16	NA	76082770	76085738	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_76082897_76083056_76083131_76083642_76083834_76084158_76084240_76084683_76084801_76085538
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040414	chr14	+	713	5	NIC	ENSMUSG00000060126.15	novel	1169	6	NA	NA	0	6	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	2355.03316059456	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCTTTGCTGTGATTGT	1076	False	NA	10	True	AATAAA	-21	NA	76082770	76085743	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_+_76082897_76083056_76083131_76083642_76083834_76084683_76084801_76085538
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040437	chr14	-	1554	8	FSM	ENSMUSG00000067995.5	ENSMUST00000088922.5	1467	8	-75	-12	-75	12	multi-exon	FALSE	canonical	3	468	junction_6	43.0538343595692	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTATCACTGGCTGATTT	NA	False	NA	-5	True	AATAAA	-31	NA	76248380	76134364	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233006_76234348_76234368_76245144_76245219_76248119
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040440	chr14	-	730	1	Genic_Genomic	ENSMUSG00000067995.5	novel	NA	NA	NA	NA	113211	12	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTATCACTGGCTGATTT	NA	False	NA	-5	True	AATAAA	-31	NA	76135094	76134364	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_-_76134400_76135100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040467	chr14	-	491	2	Antisense	novelGene_ENSMUSG00000022010.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGGACTCGGAGATATG	NA	False	NA	NA	False	NA	NA	NA	76732478	76708760	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr14_-_76709172_76732398
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040473	chr14	+	1584	3	FSM	ENSMUSG00000022010.20	ENSMUST00000142683.8	797	3	-22	-765	-22	0	multi-exon	FALSE	canonical	3	75	junction_1	1130	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGTGTTTCTATATGAC	3081	False	NA	29	True	AATAAA	-19	NA	76725176	76745203	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_+_76725365_76742688_76742738_76743856
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040480	chr14	+	1733	3	FSM	ENSMUSG00000022010.20	ENSMUST00000022587.10	1762	3	31	-2	-21	2	multi-exon	FALSE	canonical	3	2255	junction_1	40	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTTTCTATATGACGCCA	6570	False	NA	33	True	AATAAA	-23	NA	76741948	76745207	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_+_76742282_76742688_76742738_76743856
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040557	chr14	+	595	2	Antisense	novelGene_ENSMUSG00000063556.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTTTTTTTTAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	77462885	77489768	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr14_+_77462903_77489190
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040606	chr14	-	355	1	ISM	ENSMUSG00000022020.16	ENSMUST00000022597.15	13223	20	55920	9235	8339	-300	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTTTATATCTTTTATT	NA	False	NA	-15	True	AATAAA	-18	NA	79572298	79571943	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_-_79571900_79572300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040618	chr14	+	1007	1	FSM	ENSMUSG00000043881.10	ENSMUST00000061222.9	4526	1	3522	-3	3522	3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCCTGGCTTTATGTTT	6731	False	NA	NA	False	AATAAA	-18	NA	79667472	79668479	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_+_79667500_79668500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040641	chr14	+	1144	12	NNC	ENSMUSG00000022024.11	novel	7392	13	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	532.160061051666	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTGTGTTCGAGAGAGC	NA	False	NA	31	True	AATAAA	-20	NA	79825146	79866417	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840345_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040682	chr14	+	1104	13	NNC	ENSMUSG00000022024.11	novel	7392	13	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	507.714233654677	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTGTGTTCGAGAGAGC	NA	False	NA	31	True	AATAAA	-20	NA	79825203	79866417	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834911_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040697	chr14	+	1145	12	NIC	ENSMUSG00000022024.11	novel	7392	13	NA	NA	-3	0	intron_retention	FALSE	canonical	3	1684	junction_7	89.8103603513886	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTGTGTTCGAGAGAGC	NA	False	NA	31	True	AATAAA	-20	NA	79825245	79866417	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_+_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040716	chr14	-	1095	1	Genic_Genomic	ENSMUSG00000022021.15	novel	NA	NA	NA	NA	92387	4	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTATGTCTCTTCTCTTG	NA	False	NA	NA	False	AATAAA	-28	NA	86893893	86892798	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_-_86892800_86893900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040720	chr14	-	670	4	ISM	ENSMUSG00000022021.15	ENSMUST00000227666.2	3337	27	-28	301067	26	2611	5prime_fragment	FALSE	canonical	3	194	junction_3	15.9652400197707	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTAGTATTCTCTTAA	NA	False	NA	NA	False	AATAAA	-14	NA	87378634	87310563	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_-_87310823_87328413_87328591_87352449_87352483_87378433
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040725	chr14	-	886	1	FSM	ENSMUSG00000062611.5	ENSMUST00000074245.5	792	1	-25	-69	-25	69	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTATATGAGATTGCAAAT	NA	False	NA	NA	False	AATAAA	-38	NA	88361269	88360383	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_-_88360400_88361300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040742	chr14	-	484	1	FSM	ENSMUSG00000060377.5	ENSMUST00000081987.5	449	1	-32	-3	-32	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2885	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATTTACATGTATGCC	NA	False	NA	2	True	ATTAAA	-30	NA	99231786	99231302	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_-_99231300_99231800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040745	chr14	-	2761	3	FSM	ENSMUSG00000033186.10	ENSMUST00000042662.10	2240	3	-28	-493	-14	493	multi-exon	FALSE	canonical	3	792	junction_1	24.5	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAGTTCTAGTGAGTTA	NA	False	NA	NA	False	AATATA	-13	NA	99283584	99271486	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_-_99273947_99277950_99278097_99283429
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040749	chr14	-	1638	1	Genic_Genomic	ENSMUSG00000033186.10	novel	NA	NA	NA	NA	9779	8	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGATATACTGTATACT	NA	False	NA	NA	False	AATAAA	-26	NA	99273609	99271971	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_-_99272000_99273600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040801	chr14	-	273	1	Genic_Genomic	ENSMUSG00000075486.11	novel	NA	NA	NA	NA	7196	1	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGTGGTGAGCTGACAG	NA	False	NA	1	True	NA	NA	NA	101870688	101870415	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_-_101870400_101870700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040832	chr14	+	921	8	NNC	ENSMUSG00000022111.10	novel	903	9	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1983.56840886647	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGTTTTTGCTAC	105	False	NA	22	True	AATAAA	-18	NA	101891417	101933561	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427_101904518_101905964_101906013_101928007_101928084_101932594_101932654_101933337
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040846	chr14	+	1036	9	NNC	ENSMUSG00000022111.10	novel	903	9	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2073.6511278419	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGTTTTTGCTAC	109	False	NA	22	True	AATAAA	-18	NA	101891421	101933561	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101911571_101911695_101928007_101928084_101932594_101932654_101933337
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040860	chr14	+	846	7	NIC	ENSMUSG00000022111.10	novel	903	9	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_1	2078.68601658729	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGTTTTTGCTAC	114	False	NA	22	True	AATAAA	-18	NA	101891426	101933561	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_+_101891542_101903196_101903326_101903947_101904105_101904427_101904514_101928007_101928084_101932594_101932654_101933337
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040885	chr14	-	178	1	Intergenic	novelGene_126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGACTGAGCGGGGCCA	NA	False	NA	NA	False	NA	NA	NA	101908376	101908198	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr14_-_101908200_101908400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040887	chr14	+	226	1	NIC	ENSMUSG00000022111.10	novel	903	9	NA	NA	30104	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGTTTTTGCTAC	NA	False	NA	22	True	AATAAA	-18	NA	101933335	101933561	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr14_+_101933300_101933600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040893	chr14	+	134	1	Intergenic	novelGene_127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAAAACTTTGAATTTG	NA	False	NA	NA	False	NA	NA	NA	102557543	102557677	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr14_+_102557500_102557700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040935	chr14	-	400	2	Antisense	novelGene_ENSMUSG00000060143.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATTTCTATGCACAGCT	NA	False	NA	NA	False	NA	NA	NA	105984611	105919255	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr14_-_105919641_105984596
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040968	chr14	-	1697	12	FSM	ENSMUSG00000022130.11	ENSMUST00000022727.10	1682	12	-8	-7	0	5	multi-exon	FALSE	canonical	3	141	junction_8	15.4084875183551	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTATTTTGTTGTA	242	False	NA	3	True	ATTAAA	-27	NA	118370167	118349880	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_-_118350570_118351724_118351823_118352528_118352588_118353490_118353657_118354381_118354426_118355148_118355209_118357051_118357151_118359130_118359274_118364906_118364998_118365634_118365704_118368018_118368086_118370055
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000040972	chr14	-	741	5	ISM	ENSMUSG00000022130.11	ENSMUST00000228543.2	1594	12	0	8986	0	8965	5prime_fragment	FALSE	canonical	3	141	junction_1	23.054283766797	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAAATCTGTATTC	242	False	NA	NA	False	AAAAAG	-17	NA	118370167	118358871	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr14_-_118359274_118364906_118364998_118365634_118365704_118368018_118368086_118370055
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041025	chr14	-	809	1	Genic_Genomic	ENSMUSG00000063410.9	novel	NA	NA	NA	NA	16329	5	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCATACTATTCTTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	121524558	121523749	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr14_-_121523700_121524600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041070	chr14	+	1255	8	FSM	ENSMUSG00000025545.11	ENSMUST00000026625.7	1231	8	-19	-5	-19	5	multi-exon	FALSE	canonical	3	643	junction_7	45.2372430997437	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTGCTATTGTCTATT	NA	False	NA	17	True	AATAAA	-27	NA	122419096	122639651	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr14_+_122419194_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041083	chr14	+	1278	8	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	19423	5	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	209.063900005989	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTGCTATTGTCTATT	NA	False	NA	17	True	AATAAA	-27	NA	122514875	122639651	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr14_+_122514996_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041122	chr15	+	2013	5	FSM	ENSMUSG00000064373.14	ENSMUST00000159216.10	2085	5	75	-3	-2	2	multi-exon	FALSE	canonical	2	6	junction_1	1.78535710713571	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTCTTTATTGTTCA	9352	False	NA	17	True	AATAAA	-22	NA	3300477	3309992	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_3300535_3304142_3304359_3305048_3305262_3306638_3306757_3308583
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041197	chr15	+	543	4	NNC	ENSMUSG00000041841.9	novel	556	4	NA	NA	-24	1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	9929.57146887798	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGGTGATCTAAGGTA	2273	False	NA	37	True	AATAAA	-18	NA	5146151	5148160	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_5146362_5146768_5146905_5147100_5147186_5148048
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041223	chr15	+	1591	8	NIC	ENSMUSG00000050697.10	novel	4655	9	NA	NA	11	-2952	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	45.007482371132	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTTATTTCTTTGATG	NA	False	NA	NA	False	ATTAAA	-24	NA	5173353	5208421	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_+_5173478_5190083_5190226_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041231	chr15	+	1663	5	FSM	ENSMUSG00000022151.17	ENSMUST00000022751.15	1832	5	155	14	-12	-14	multi-exon	FALSE	canonical	3	41	junction_1	41.1430431543414	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGGTCAAAAAAGTTTCT	NA	False	NA	17	True	AGTAAA	-17	NA	5215195	5247803	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_5215250_5219062_5219285_5237849_5237932_5241479_5241612_5246630
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041238	chr15	-	1257	3	Antisense	novelGene_ENSMUSG00000115093.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	1.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGTGTTGTATTATCT	NA	False	NA	NA	False	NA	NA	NA	6074122	6054170	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr15_-_6055131_6073729_6073988_6074083
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041242	chr15	-	225	1	Intergenic	novelGene_128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACTTTTTACTCCACAGA	8757	False	NA	NA	False	AATAAA	-16	NA	6572329	6572104	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr15_-_6572100_6572300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041249	chr15	+	1033	1	FSM	ENSMUSG00000067547.7	ENSMUST00000146631.2	819	1	-67	-147	-67	147	mono-exon	FALSE	NA	NA	NA	NA	NA	913	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTATTCCAGAAAGATTG	NA	False	NA	NA	False	AATAAA	-41	NA	6683336	6684369	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_6683300_6684400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041251	chr15	+	851	7	NNC	ENSMUSG00000050310.10	novel	2633	7	NA	NA	-2	-1790	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	30.4119859412188	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGCCTTCCTTGATTGAT	NA	False	NA	NA	False	ACTAAA	-2	NA	6737857	6786306	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_6737933_6738113_6738162_6764845_6764948_6773808_6773874_6774929_6775062_6780138_6780203_6785941
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041259	chr15	+	214	1	FSM	ENSMUSG00000115497.2	ENSMUST00000228223.2	279	1	65	0	65	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGAACGCTTCACGAATT	NA	False	NA	6	True	AGTAAA	-28	NA	7790259	7790473	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_7790300_7790500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041288	chr15	+	207	1	Intergenic	novelGene_129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCCTAGGACAGCCAG	NA	False	NA	NA	False	NA	NA	NA	8214207	8214414	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr15_+_8214200_8214400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041366	chr15	-	424	1	NIC	ENSMUSG00000022247.13	novel	2664	10	NA	NA	8788	-1395	mono-exon	FALSE	NA	NA	NA	NA	NA	289	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATTCTTTTCAGAGCCT	9278	False	NA	-4	True	AATAAA	-21	NA	10476683	10476259	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_-_10476300_10476700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041426	chr15	-	505	1	NIC	ENSMUSG00000022241.7	novel	4093	17	NA	NA	3185	349	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTGTCCTCACGGTTA	NA	False	NA	-1	True	AATAAA	-22	NA	11384246	11383741	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_-_11383700_11384200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041442	chr15	-	728	5	NNC	ENSMUSG00000022205.16	novel	3372	5	NA	NA	3	67	at_least_one_novel_splicesite	FALSE	canonical	3	110	junction_3	3385.52362087462	1051	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTACCCTTTTTTGATC	812	False	NA	80	True	AATAAA	-23	NA	11996141	11984059	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_11984384_11986541_11986651_11991044_11991162_11993874_11993948_11996036
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041444	chr15	-	326	1	NIC	ENSMUSG00000022205.16	novel	3372	5	NA	NA	11451	67	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTACCCTTTTTTGATC	6648	False	NA	80	True	AATAAA	-23	NA	11984385	11984059	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_-_11984100_11984400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041446	chr15	-	658	5	NNC	ENSMUSG00000022205.16	novel	3372	5	NA	NA	4	66	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3433.10576410049	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTACCCTTTTTTGAT	859	False	NA	79	True	AATAAA	-22	NA	11996094	11984060	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_11984384_11986541_11986651_11991044_11991140_11993874_11993948_11996036
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041447	chr15	-	678	5	NNC	ENSMUSG00000022205.16	novel	3372	5	NA	NA	4	66	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3433.10576410049	263	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTACCCTTTTTTGAT	859	False	NA	79	True	AATAAA	-22	NA	11996094	11984060	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_11984384_11986541_11986651_11991044_11991160_11993874_11993948_11996036
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041449	chr15	-	675	5	NNC	ENSMUSG00000022205.16	novel	3372	5	NA	NA	7	66	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3502.78653360435	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTACCCTTTTTTGAT	862	False	NA	79	True	AATAAA	-22	NA	11996091	11984060	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_11984384_11986541_11986651_11991044_11991168_11993874_11993932_11996028
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041453	chr15	-	757	6	NNC	ENSMUSG00000022205.16	novel	3372	5	NA	NA	7	66	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3881.40734270445	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTACCCTTTTTTGAT	862	False	NA	79	True	AATAAA	-22	NA	11996091	11984060	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_11984384_11986541_11986651_11991044_11991168_11993498_11993573_11993874_11993948_11996036
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041457	chr15	-	671	5	NNC	ENSMUSG00000022205.16	novel	3372	5	NA	NA	4	66	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3433.10576410049	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTACCCTTTTTTGAT	859	False	NA	79	True	AATAAA	-22	NA	11996094	11984060	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_11984384_11986541_11986651_11991044_11991153_11993874_11993948_11996036
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041458	chr15	-	677	5	NNC	ENSMUSG00000022205.16	novel	3372	5	NA	NA	4	66	at_least_one_novel_splicesite	FALSE	canonical	1	157	junction_2	3394.08610674508	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTACCCTTTTTTGAT	859	False	NA	79	True	AATAAA	-22	NA	11996094	11984060	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_11984384_11986541_11986642_11991044_11991168_11993874_11993948_11996036
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041460	chr15	-	523	4	NNC	ENSMUSG00000022205.16	novel	3372	5	NA	NA	4	66	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3677.90967202235	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTACCCTTTTTTGAT	859	False	NA	79	True	AATAAA	-22	NA	11996094	11984060	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_11984384_11986541_11986611_11993874_11993948_11996036
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041461	chr15	-	691	5	NNC	ENSMUSG00000022205.16	novel	3372	5	NA	NA	4	66	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3520.74413299234	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTACCCTTTTTTGAT	859	False	NA	79	True	AATAAA	-22	NA	11996094	11984060	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_11984384_11986536_11986651_11991044_11991168_11993874_11993948_11996036
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041566	chr15	-	941	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTCTCATAGGTGCTTT	9796	False	NA	NA	False	NA	NA	NA	22705094	22704110	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr15_-_22704588_22704630
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041612	chr15	+	624	1	FSM	ENSMUSG00000022240.11	ENSMUST00000228827.2	2014	1	1609	-219	1609	219	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCCTTGCTAAGAATGT	373	False	NA	NA	False	AATAAA	-18	NA	31028150	31028774	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_31028200_31028800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041660	chr15	+	696	2	FSM	ENSMUSG00000039065.12	ENSMUST00000160146.2	4655	2	269	3690	3	2	multi-exon	FALSE	canonical	2	2	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCGTGACAAGGAGTGTT	118	False	NA	29	True	ATTAAA	-29	NA	31602266	31617683	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_31602296_31617016
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041666	chr15	+	669	1	NIC	ENSMUSG00000039065.12	novel	4655	2	NA	NA	14751	2	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCGTGACAAGGAGTGTT	NA	False	NA	29	True	ATTAAA	-29	NA	31617014	31617683	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_+_31617000_31617700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041706	chr15	-	607	4	FSM	ENSMUSG00000058600.14	ENSMUST00000009039.6	570	4	-18	-19	-18	14	multi-exon	FALSE	canonical	3	4307	junction_1	558.07426825548	5059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTCTAACATTTAGCTTT	343	False	NA	-6	True	AATAAA	-41	NA	34443386	34440636	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041733	chr15	-	579	4	NNC	ENSMUSG00000058600.14	novel	570	4	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	2252.79298254905	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	361	False	NA	-20	True	AATAAA	-27	NA	34443368	34440650	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_34440751_34441377_34441509_34442780_34442927_34443166
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041736	chr15	-	499	5	NNC	ENSMUSG00000058600.14	novel	886	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	1957.05421169164	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	324	False	NA	-20	True	AATAAA	-27	NA	34443405	34440650	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_34440751_34441377_34441509_34442780_34442921_34443170_34443224_34443330
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041739	chr15	-	491	5	NNC	ENSMUSG00000058600.14	novel	886	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2092.87445872895	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	324	False	NA	-20	True	AATAAA	-27	NA	34443405	34440650	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_34440751_34441377_34441495_34442780_34442927_34443170_34443224_34443330
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041742	chr15	-	530	4	NNC	ENSMUSG00000058600.14	novel	886	5	NA	NA	31	0	intron_retention	FALSE	canonical	0	0	junction_2	2413.95291310056	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	392	False	NA	-20	True	AATAAA	-27	NA	34443337	34440650	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_34440751_34441377_34441495_34442780_34442927_34443170
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041768	chr15	-	1853	1	FSM	ENSMUSG00000065899.3	ENSMUST00000083965.3	132	1	-1435	-286	-1435	286	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	1226	False	NA	-20	True	AATAAA	-27	NA	34442503	34440650	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_34440600_34442500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041805	chr15	-	604	4	FSM	ENSMUSG00000014313.16	ENSMUST00000014457.15	503	4	0	-101	0	101	multi-exon	FALSE	canonical	3	8539	junction_3	472.446822404384	65635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTCCTGGCTTTGGTGT	NA	False	NA	NA	False	TATAAA	-18	NA	35938392	35932020	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_35932244_35935430_35935560_35937300_35937431_35938270
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041820	chr15	-	1266	3	FSM	ENSMUSG00000014313.16	ENSMUST00000153512.2	738	3	-524	-4	38	0	multi-exon	FALSE	canonical	3	8821	junction_1	415.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGCTTGGTTATTAAT	NA	False	NA	-1	True	AATAAA	-22	NA	35938315	35932121	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_35932244_35935430_35935560_35937300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041839	chr15	-	447	4	NNC	ENSMUSG00000014313.16	novel	503	4	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4367.32445427276	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGCTTGGTTATTAAT	NA	False	NA	-1	True	AATAAA	-22	NA	35938344	35932121	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_35932244_35935430_35935560_35937300_35937431_35938278
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041869	chr15	-	175	1	Intergenic	novelGene_130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAGGTCTTTCGTGAGTT	NA	False	NA	NA	False	NA	NA	NA	35948816	35948641	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr15_-_35948600_35948800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041886	chr15	+	741	4	NNC	ENSMUSG00000045996.13	novel	601	4	NA	NA	19	1	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	331.644722892167	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTATTCAATGTCTTG	151	False	NA	NA	False	ATTAAA	-16	NA	36174197	36177157	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_36174518_36175132_36175203_36175529_36175623_36176899
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041896	chr15	+	186	1	Intergenic	novelGene_131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATAGTTCACCCAGTCA	NA	False	NA	NA	False	NA	NA	NA	36459656	36459842	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr15_+_36459700_36459800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041909	chr15	-	2824	15	FSM	ENSMUSG00000022283.16	ENSMUST00000001809.15	2817	15	-4	-3	-4	3	multi-exon	FALSE	canonical	3	5069	junction_10	538.55476006794	1467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTATGCTTTTATTTACT	373	False	NA	-4	True	AATAAA	-19	NA	36609221	36595901	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041914	chr15	-	2862	15	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	83	junction_1	1540.43655354909	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGCTTTTATTTA	377	False	NA	-6	True	AATAAA	-17	NA	36609217	36595903	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_-_36596344_36596762_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041915	chr15	-	2822	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1582.11551895117	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGCTTTTATTTA	377	False	NA	-6	True	AATAAA	-17	NA	36609217	36595903	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600832_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041916	chr15	-	2821	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1575.23443671482	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGCTTTTATTTA	378	False	NA	-6	True	AATAAA	-17	NA	36609216	36595903	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597696_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041917	chr15	-	2809	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	1581.86815415914	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGCTTTTATTTA	377	False	NA	-6	True	AATAAA	-17	NA	36609217	36595903	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603098_36603230_36605685_36605802_36605987_36606182_36608557
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041918	chr15	-	1441	8	ISM	ENSMUSG00000022283.16	ENSMUST00000001809.15	2817	15	9434	-1	223	1	3prime_fragment	FALSE	canonical	3	5838	junction_6	322.899112316361	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGCTTTTATTTA	9811	False	NA	-6	True	AATAAA	-17	NA	36599783	36595903	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041919	chr15	-	2816	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	1580.90175926557	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGCTTTTATTTA	377	False	NA	-6	True	AATAAA	-17	NA	36609217	36595903	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605687_36605802_36605987_36606182_36608557
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041924	chr15	-	2813	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	1580.48992662505	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGCTTTTATTTA	377	False	NA	-6	True	AATAAA	-17	NA	36609217	36595903	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605992_36606182_36608557
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041980	chr15	-	788	5	NNC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	84	10	at_least_one_novel_splicesite	TRUE	canonical	3	37	junction_4	3143.77363808211	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATAAATGGTTCTAGAAAT	239	False	NA	-16	True	AATAAA	-28	NA	37007562	37000861	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_37001168_37002082_37002191_37003929_37004067_37005373_37005420_37007371
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000041995	chr15	-	1687	1	ISM	ENSMUSG00000022292.17	ENSMUST00000022901.16	4561	9	35465	0	22804	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTAGTTATATCATTTT	NA	False	NA	NA	False	AATAAA	-16	NA	37925882	37924195	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_-_37924200_37925900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042008	chr15	-	592	5	ISM	ENSMUSG00000037487.8	ENSMUST00000226414.2	8397	59	40464	60395	-22908	-19263	internal_fragment	FALSE	canonical	3	524	junction_1	33.9300751546471	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAAATCCAGTGCTGGTA	NA	False	NA	NA	False	AATAAA	-3	NA	38038205	38028931	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_-_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042017	chr15	-	1460	1	Genic_Genomic	ENSMUSG00000037465.11	novel	NA	NA	NA	NA	2971	4	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCTGTTGTATGTGTT	4592	False	NA	-3	True	AATAAA	-22	NA	38296112	38294652	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr15_-_38294700_38296100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042030	chr15	-	492	2	Antisense	novelGene_ENSMUSG00000115456.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCCAGGCAGCTAGGATG	NA	False	NA	NA	False	NA	NA	NA	38343388	38313593	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr15_-_38313714_38343016
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042047	chr15	+	2062	13	NNC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	419.834358871316	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGCTAGTCATTTATT	195	False	NA	29	True	AATAAA	-15	NA	38662187	38692688	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_38662332_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042081	chr15	+	184	1	ISM	ENSMUSG00000022300.11	ENSMUST00000022909.10	1551	11	33808	0	1714	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCAGTTGTGTGTTTTT	3749	False	NA	NA	False	AATAAA	-27	NA	39010067	39010251	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_+_39010100_39010300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042084	chr15	-	1338	3	Antisense	novelGene_ENSMUSG00000037386.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	116	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTTCTCGTTGGTGATT	2101	False	NA	NA	False	NA	NA	NA	39110569	39105320	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr15_-_39106174_39108258_39108492_39110317
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042107	chr15	-	708	2	NNC	ENSMUSG00000022304.14	novel	2110	10	NA	NA	8382	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTGTCTGAGTTCCAT	NA	False	NA	NA	False	AATAAA	-22	NA	39648265	39646092	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_39646496_39647960
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042108	chr15	-	704	2	NNC	ENSMUSG00000022304.14	novel	2110	10	NA	NA	8382	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTGTCTGAGTTCCAT	NA	False	NA	NA	False	AATAAA	-22	NA	39648265	39646092	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_39646496_39647964
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042122	chr15	+	607	3	NNC	ENSMUSG00000115367.2	novel	1064	3	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	1	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCCGTCACCTGACTC	NA	False	NA	NA	False	AATAAA	-22	NA	40025977	40031476	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_40026222_40028595_40028677_40031194
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042125	chr15	+	1049	3	FSM	ENSMUSG00000115367.2	ENSMUST00000228503.2	1064	3	15	0	15	0	multi-exon	FALSE	canonical	1	1	junction_2	6	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTTCTGCCGTCACCTG	NA	False	NA	NA	False	AATAAA	-18	NA	40026017	40031472	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_40026222_40028595_40028677_40030708
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042131	chr15	+	433	5	Intergenic	novelGene_132	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_4	6.57647321898295	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGCCTTAATTC	NA	False	NA	12	True	NA	NA	NA	41210819	41215818	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr15_+_41210883_41212202_41212325_41212702_41212780_41214473_41214518_41215691
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042157	chr15	-	184	1	Intergenic	novelGene_133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAGTTTTTAAAAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	41855347	41855163	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr15_-_41855200_41855300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042216	chr15	+	1275	11	FSM	ENSMUSG00000022337.8	ENSMUST00000022962.8	1231	11	-29	-15	-29	15	multi-exon	FALSE	canonical	3	590	junction_9	74.0384359640315	1088	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTTTGTTTTATTGGA	NA	False	NA	25	True	AATAAA	-35	NA	43340595	43391174	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_43340722_43355565_43355680_43358135_43358201_43358559_43358646_43360456_43360515_43371040_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390792
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042243	chr15	+	734	5	FSM	ENSMUSG00000022338.9	ENSMUST00000060652.5	3000	5	-31	2297	-12	65	multi-exon	FALSE	canonical	3	627	junction_1	138.867742834684	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTATTTATATGTGTGA	9604	False	NA	105	True	GATAAA	-22	NA	44291475	44299355	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_44291639_44292955_44293033_44295833_44295905_44297294_44297370_44299007
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042257	chr15	+	673	5	FSM	ENSMUSG00000022338.9	ENSMUST00000226336.2	2547	5	-24	1898	-1	17	multi-exon	FALSE	canonical	3	93	junction_3	350.174510066053	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTGCCTAGAAATGTTG	9615	False	NA	57	True	AATAAA	-18	NA	44291486	44299307	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_44291639_44292955_44293033_44295833_44295905_44297296_44297370_44299007
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042268	chr15	+	634	5	NNC	ENSMUSG00000022338.9	novel	558	5	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	2	36	junction_1	391.385599505143	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTATTTTGGAATAAA	9616	False	NA	20	True	AATAAA	-22	NA	44291487	44299270	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_44291636_44292955_44293033_44295833_44295905_44297294_44297370_44299007
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042273	chr15	+	676	5	FSM	ENSMUSG00000022338.9	ENSMUST00000227425.2	502	5	-16	-158	0	1	multi-exon	FALSE	canonical	3	90	junction_3	351.373732655132	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAATTTTTTTATTTTGG	9616	False	NA	14	True	AATAAA	-16	NA	44291487	44299264	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_44291639_44292955_44293033_44295833_44295905_44297249_44297370_44299007
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042293	chr15	+	259	1	NIC	ENSMUSG00000022338.9	novel	3000	5	NA	NA	2065	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAATTTTTTTATTTTGG	NA	False	NA	14	True	AATAAA	-16	NA	44299005	44299264	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_+_44299000_44299300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042305	chr15	+	454	1	Intergenic	novelGene_134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCGTTTCTTGTGGGTGA	NA	False	NA	NA	False	NA	NA	NA	44773297	44773751	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr15_+_44773300_44773800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042309	chr15	-	445	2	Intergenic	novelGene_135	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAACCCTGAGAACTTTTG	NA	False	NA	NA	False	AGTAAA	-19	NA	47033332	47022219	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr15_-_47022513_47033180
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042324	chr15	-	1259	8	NNC	ENSMUSG00000022312.12	novel	1295	8	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	673.611951515477	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTGTATTTATGGTG	NA	False	NA	-12	True	AATAAA	-24	NA	51728885	51649953	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_51650222_51651301_51651429_51653384_51653510_51659783_51659934_51661008_51661109_51662587_51662756_51705863_51706021_51728721
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042353	chr15	-	1252	8	NNC	ENSMUSG00000022312.12	novel	1295	8	NA	NA	-29	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	828.701369121394	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGTGTGTATTTATGG	NA	False	NA	-14	True	AATAAA	-22	NA	51728879	51649955	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_51650222_51651301_51651435_51653388_51653510_51659783_51659934_51661008_51661109_51662583_51662751_51705863_51706021_51728721
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042397	chr15	-	3555	14	FSM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	39	362	39	-362	multi-exon	FALSE	canonical	3	565	junction_13	70.6746022859982	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGAACATACTCAGTTG	NA	False	NA	-19	True	AATAAA	-22	NA	51855104	51825997	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042401	chr15	-	2281	6	NNC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	21511	-364	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	307.457314110431	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGGAACATACTCAGT	NA	False	NA	-21	True	AATAAA	-20	NA	51833395	51825999	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833313
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042412	chr15	+	523	1	ISM	ENSMUSG00000068522.5	ENSMUST00000090025.5	1348	2	5093	0	5093	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTTCTAGTGGTCAT	NA	False	NA	16	True	AATAAA	-27	NA	51908595	51909118	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_+_51908600_51909100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042440	chr15	-	1254	7	FSM	ENSMUSG00000022370.14	ENSMUST00000172387.8	1223	7	-16	-15	-16	15	multi-exon	FALSE	canonical	3	905	junction_4	55.6070039553372	3330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACATAGCCCCTCTAT	NA	False	NA	15	True	AATAAA	-35	NA	55421160	55397474	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_55397734_55402425_55402548_55403518_55403606_55406719_55406781_55411537_55411632_55418715_55418840_55420653
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042454	chr15	-	244	1	ISM	ENSMUSG00000022370.14	ENSMUST00000164542.8	730	6	23012	0	13827	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATGTCTCTTACTGAAA	NA	False	NA	0	True	AATAAA	-20	NA	55397733	55397489	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_-_55397500_55397700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042488	chr15	+	216	1	Intergenic	novelGene_136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	55740073	55740289	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr15_+_55740100_55740300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042523	chr15	+	498	3	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	5733	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	176.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAACTGTCTTCT	NA	False	NA	9	True	AATAAA	-16	NA	57827541	57833458	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_57827605_57831304_57831401_57833119
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042538	chr15	+	652	1	NIC	ENSMUSG00000022364.15	novel	914	6	NA	NA	11003	0	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAACTGTCTTCTTTGCT	NA	False	NA	14	True	AATAAA	-21	NA	57832811	57833463	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_+_57832800_57833500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042568	chr15	-	571	3	NNC	ENSMUSG00000101892.2	novel	1672	4	NA	NA	1899	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	479.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTCCCAGGTAATTTCA	3028	False	NA	-20	True	AATAAA	-29	NA	57889392	57885665	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_57885960_57888669_57888803_57889248
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042575	chr15	-	1336	6	NNC	ENSMUSG00000101892.2	novel	1341	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	336.088083692356	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTCCCAGGTAATTTCA	NA	False	NA	-20	True	AATAAA	-29	NA	57897721	57885665	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_57885960_57888669_57888803_57892009_57892441_57894352_57894493_57895379_57895476_57897479
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042665	chr15	-	722	9	NIC	ENSMUSG00000050891.11	novel	915	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	37.1079506305589	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTCCTTTTTATGA	NA	False	NA	-1	True	ATTAAA	-16	NA	58805587	58772822	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_-_58772920_58776582_58776710_58777589_58777661_58792988_58793032_58793122_58793267_58795753_58795818_58798284_58798335_58800532_58800599_58805527
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042710	chr15	+	660	4	NNC	ENSMUSG00000022354.5	novel	704	4	NA	NA	-7	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1663.37995926634	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCTGAAGTGTTCTT	2861	False	NA	17	True	AATAAA	-18	NA	58805649	58811341	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_58805788_58808116_58808314_58809207_58809315_58811123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042725	chr15	+	232	1	Genic_Genomic	ENSMUSG00000022354.5	novel	NA	NA	NA	NA	5465	16	mono-exon	FALSE	NA	NA	NA	NA	NA	1102	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCTTCCAAGGTTACTG	8333	False	NA	29	True	AATAAA	-30	NA	58811121	58811353	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr15_+_58811100_58811400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042731	chr15	+	833	2	Genic_Genomic	ENSMUSG00000025922.10	novel	810	1	NA	NA	-11	78	multi-exon	TRUE	canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGAATAGCCACAACCAG	NA	False	NA	NA	False	AATAAA	-34	NA	59082745	59083644	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr15_+_59082787_59082852
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042733	chr15	+	1583	2	Genic_Genomic	ENSMUSG00000115604.2_ENSMUSG00000025922.10	novel	810	1	NA	NA	-11	47	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGTAAATGCTTTTGTT	NA	False	NA	NA	False	AATAAA	-44	NA	59082745	59110898	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr15_+_59083647_59110216
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042734	chr15	+	1547	2	Genic_Genomic	ENSMUSG00000115604.2_ENSMUSG00000025922.10	novel	810	1	NA	NA	-11	42	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTGAGAGTAAATGCTT	NA	False	NA	NA	False	AATAAA	-39	NA	59082745	59110893	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr15_+_59083647_59110247
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042752	chr15	+	1136	7	FSM	ENSMUSG00000059586.11	ENSMUST00000079703.11	1054	7	-74	-8	-34	8	multi-exon	FALSE	canonical	3	776	junction_4	74.7677886674618	2277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCCTGTCTGCTGTATCT	NA	False	NA	24	True	AATAAA	-25	NA	59246061	59473541	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_59246205_59250716_59250888_59287873_59287981_59327161_59327316_59463545_59463647_59463986_59464094_59473188
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042758	chr15	+	933	6	NIC	ENSMUSG00000059586.11	novel	1054	7	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	346.521225901098	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCATGGTCCTGTCTG	NA	False	NA	16	True	AATAAA	-17	NA	59246085	59473533	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_+_59246205_59287873_59287981_59327161_59327316_59463545_59463647_59463986_59464094_59473188
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042779	chr15	+	351	1	Genic_Genomic	ENSMUSG00000059586.11	novel	NA	NA	NA	NA	227052	5	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCCTGTCTGCTGTA	3797	False	NA	21	True	AATAAA	-22	NA	59473187	59473538	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr15_+_59473200_59473500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042789	chr15	+	1209	6	NIC	ENSMUSG00000097039.9	novel	1342	7	NA	NA	-16	2	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	8.29457654133109	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGTCATGATTGTCAAT	NA	False	NA	29	True	AATAAA	-37	NA	61909870	62121379	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_+_61910051_61978996_61979315_62047315_62047398_62114022_62114151_62114282_62114411_62121006
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042805	chr15	-	166	2	ISM	ENSMUSG00000022377.17	ENSMUST00000176358.2	631	8	41946	1279	41946	-1279	internal_fragment	FALSE	canonical	3	112	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCTACTTCTAGCATGTG	NA	False	NA	NA	False	NA	NA	NA	64038394	64032066	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_-_64032147_64038308
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042818	chr15	-	740	1	FSM	ENSMUSG00000092454.2	ENSMUST00000173338.2	480	1	-50	-210	-50	210	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTTTATTAATCATTC	NA	False	NA	NA	False	AATAAA	-27	NA	65800832	65800092	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_65800100_65800800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042821	chr15	-	1395	1	ISM	ENSMUSG00000005125.14	ENSMUST00000005256.14	2889	16	38928	0	3757	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTCTTTTCCTCTCC	9639	False	NA	0	True	AATAAA	-18	NA	66802561	66801166	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_-_66801200_66802600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042822	chr15	-	2889	16	NNC	ENSMUSG00000005125.14	novel	2889	16	NA	NA	0	-3	intron_retention	FALSE	canonical	0	0	junction_13	11.8122347118947	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTGTGTCTTTTCCTC	NA	False	NA	-3	True	AATAAA	-15	NA	66841488	66801169	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_66802958_66805712_66805765_66808101_66808138_66809046_66809095_66809715_66809768_66810491_66810549_66811991_66812096_66813860_66813918_66814913_66815001_66815852_66815914_66816624_66816688_66818280_66818402_66820227_66820334_66831206_66831247_66832320_66832402_66841352
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042828	chr15	+	574	1	FSM	ENSMUSG00000068397.5	ENSMUST00000089785.5	483	1	-38	-53	-38	53	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTATTTTCATAATTGCT	NA	False	NA	NA	False	AATAAA	-36	NA	68181629	68182203	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_68181600_68182200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042835	chr15	+	465	1	Intergenic	novelGene_137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAACTATTATATACAAT	NA	False	NA	NA	False	AATAAA	-41	NA	71667154	71667619	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr15_+_71667200_71667600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042843	chr15	+	837	3	NNC	ENSMUSG00000068391.9	novel	871	3	NA	NA	444	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	239	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTCATTGAAGTGGTT	NA	False	NA	9	True	ATTAAA	-20	NA	72962704	72965926	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_72962861_72964681_72964809_72965372
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042853	chr15	-	792	1	FSM	ENSMUSG00000116174.2	ENSMUST00000229262.2	552	1	-14	-226	-14	226	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGGTGTGGAGCAGGGG	NA	False	NA	NA	False	NA	NA	NA	73300773	73299981	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_73300000_73300800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042856	chr15	-	215	1	Intergenic	novelGene_138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTGGAAGCTGTGGCGT	NA	False	NA	NA	False	NA	NA	NA	73322866	73322651	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr15_-_73322700_73322900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042878	chr15	+	1470	2	FSM	ENSMUSG00000056665.3	ENSMUST00000070923.3	1784	2	48	266	48	-266	multi-exon	FALSE	canonical	3	79	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGTGTGCCGGGGAGGTTC	4688	False	NA	13	True	ATTAAA	-14	NA	74593100	74596222	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_74593657_74595308
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042883	chr15	-	602	3	FSM	ENSMUSG00000022595.8	ENSMUST00000023260.5	513	3	-88	-1	-88	1	multi-exon	FALSE	canonical	2	7	junction_2	1.5	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGAGTCTCGTTTCTGGG	NA	False	NA	NA	False	AATACA	-20	NA	74606266	74604094	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_74604389_74604815_74604936_74606078
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042891	chr15	-	678	3	FSM	ENSMUSG00000044678.12	ENSMUST00000168815.8	612	3	-65	-1	-65	1	multi-exon	FALSE	canonical	3	114	junction_2	7.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGGTTTGACTTCTGT	1164	False	NA	-1	True	ATTAAA	-19	NA	74671447	74668721	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_74669121_74670383_74670483_74671267
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042898	chr15	+	1196	4	FSM	ENSMUSG00000022587.15	ENSMUST00000051698.14	2281	4	519	566	-63	8	multi-exon	FALSE	canonical	3	397	junction_1	104.416899441081	636	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGGTTGTCCTTAACC	8324	False	NA	35	True	AATAAA	-23	NA	74827438	74831188	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_74827567_74829625_74829727_74830117_74830238_74830341
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042929	chr15	-	863	4	FSM	ENSMUSG00000075602.11	ENSMUST00000186526.7	862	4	21	-22	0	0	multi-exon	FALSE	canonical	0	0	junction_3	38.2738669184195	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTTCTCCATTTTTCT	9632	False	NA	-3	True	AATAAA	-16	NA	74869756	74866725	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_74867329_74868300_74868418_74869383_74869467_74869696
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042952	chr15	-	915	3	FSM	ENSMUSG00000068348.5	ENSMUST00000089689.5	408	3	-115	-392	-115	392	multi-exon	FALSE	canonical	3	72	junction_2	2	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGTTTTTCTTTTGCT	1237	False	NA	1	True	AATAAA	-22	NA	75110732	75107053	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_75107668_75109440_75109558_75110548
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042954	chr15	-	983	3	Fusion	ENSMUSG00000068348.5_ENSMUSG00000101289.2	novel	408	3	NA	NA	-182	392	multi-exon	FALSE	canonical	0	0	junction_2	38	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGTTTTTCTTTTGCT	NA	False	NA	1	True	AATAAA	-22	NA	75186995	75107053	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr15_-_75107668_75109440_75109558_75186743
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042965	chr15	-	870	4	NNC	ENSMUSG00000068348.5	novel	408	3	NA	NA	-297	386	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	34.9221356098901	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAAGTCTCTGTTTTTCT	1055	False	NA	-5	True	AATAAA	-16	NA	75110914	75107059	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_75107668_75109440_75109558_75110548_75110631_75110851
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000042999	chr15	-	1466	5	Intergenic	novelGene_139	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_3	26.2916336502698	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCCATCAGATCCTTGAC	NA	False	NA	NA	False	NA	NA	NA	75754392	75741178	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr15_-_75741955_75743124_75743208_75744217_75744419_75748129_75748389_75754245
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043020	chr15	-	1037	8	FSM	ENSMUSG00000055762.17	ENSMUST00000154584.9	2312	8	3	1272	3	11	multi-exon	FALSE	canonical	3	2715	junction_5	241.1927842695	6600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTACTTGGTGTACAGCG	NA	False	NA	5	True	ATTAAA	-27	NA	75781201	75767325	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773105_75781093
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043037	chr15	-	912	7	NNC	ENSMUSG00000055762.17	novel	973	8	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	1448.20721545257	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTCTTGTGTTACTTGGT	NA	False	NA	-3	True	ATTAAA	-19	NA	75781155	75767333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772980_75773102_75781089
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043045	chr15	-	987	8	NNC	ENSMUSG00000055762.17	novel	2312	8	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1088.61218521378	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTCTTGTGTTACTTGGT	NA	False	NA	-3	True	ATTAAA	-19	NA	75781155	75767333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_75767441_75767580_75767776_75768087_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773105_75781093
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043049	chr15	-	1019	8	NIC	ENSMUSG00000055762.17	novel	2312	8	NA	NA	-5	3	combination_of_known_junctions	FALSE	canonical	3	250	junction_7	1032.38266121806	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTCTTGTGTTACTTGGT	NA	False	NA	-3	True	ATTAAA	-19	NA	75781194	75767333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773102_75781093
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043057	chr15	-	982	8	NNC	ENSMUSG00000055762.17	novel	2312	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	1116.97057495089	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCCTCTTGTGTTACTTG	NA	False	NA	-5	True	ATTAAA	-17	NA	75781155	75767335	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773102_75781089
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043061	chr15	-	906	7	NNC	ENSMUSG00000055762.17	novel	1624	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1408.72161314198	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781155	75767336	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_75767435_75767576_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772980_75773105_75781093
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043063	chr15	-	1035	9	NNC	ENSMUSG00000055762.17	novel	2842	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1496.23543748135	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781155	75767336	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_75767435_75767576_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75769074_75769132_75772539_75772612_75772980_75773105_75781093
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043066	chr15	-	902	7	NNC	ENSMUSG00000055762.17	novel	1624	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1408.72161314198	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781155	75767336	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_75767435_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772980_75773105_75781093
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043067	chr15	-	973	8	NNC	ENSMUSG00000055762.17	novel	824	7	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1345.96759823935	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781153	75767336	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_75767435_75767576_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773102_75781093
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043075	chr15	-	984	8	NNC	ENSMUSG00000055762.17	novel	2312	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1125.49403211502	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781155	75767336	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772535_75772612_75772980_75773105_75781093
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043077	chr15	-	912	7	NNC	ENSMUSG00000055762.17	novel	1624	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1408.72161314198	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781155	75767336	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_75767441_75767576_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772980_75773105_75781093
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043078	chr15	-	906	7	NNC	ENSMUSG00000055762.17	novel	1724	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	1447.16501593057	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781155	75767336	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772980_75773105_75781095
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043080	chr15	-	974	8	NNC	ENSMUSG00000055762.17	novel	896	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1394.04088892686	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781155	75767336	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772609_75772980_75773102_75781093
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043081	chr15	-	984	8	NNC	ENSMUSG00000055762.17	novel	2312	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1117.65410296637	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781155	75767336	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773105_75781089
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043084	chr15	-	971	8	NNC	ENSMUSG00000055762.17	novel	2312	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1110.36258097276	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781155	75767336	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768581_75768668_75768769_75772539_75772612_75772980_75773105_75781093
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043085	chr15	-	901	7	NNC	ENSMUSG00000055762.17	novel	1624	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1213.97991013946	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781155	75767336	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768762_75772980_75773105_75781093
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043087	chr15	-	975	8	NNC	ENSMUSG00000055762.17	novel	2312	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1117.65410296637	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781155	75767336	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773102_75781095
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043089	chr15	-	973	8	NNC	ENSMUSG00000055762.17	novel	2312	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1125.49403211502	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781155	75767336	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768762_75772539_75772612_75772980_75773105_75781093
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043090	chr15	-	1015	8	NIC	ENSMUSG00000055762.17	novel	2312	8	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	22	junction_7	1110.13641375412	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781408	75767336	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773102_75781308
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043091	chr15	-	1034	9	NIC	ENSMUSG00000055762.17	novel	973	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_5	1491.88768323054	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781155	75767336	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75769074_75769132_75772539_75772612_75772980_75773102_75781093
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043181	chr15	-	182	1	Intergenic	novelGene_140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACTCATTTCCACATATA	8818	False	NA	NA	False	NA	NA	NA	75900762	75900580	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr15_-_75900600_75900800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043194	chr15	-	1831	11	NNC	ENSMUSG00000002524.18	novel	1881	12	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	121	junction_10	401.11844884024	48	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCTGTGTCTGAAATTGG	NA	False	NA	0	True	CATAAA	-25	NA	75952766	75942030	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449_75949549_75952698
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043276	chr15	+	1178	7	NNC	ENSMUSG00000022551.9	novel	1520	7	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_5	1758.26850591395	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTAGCTGGTCAATGAC	NA	False	NA	30	True	AATAAA	-20	NA	76227732	76230137	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_76227893_76228501_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229685_76229778_76229854
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043331	chr15	+	1653	8	FSM	ENSMUSG00000022553.17	ENSMUST00000160853.8	1651	8	0	-2	0	2	multi-exon	FALSE	canonical	3	203	junction_1	163.413086179455	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACCTGGGAGTTTGTGG	NA	False	NA	26	True	AATAAA	-18	NA	76235493	76238575	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_76235860_76236666_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043342	chr15	+	1069	5	NNC	ENSMUSG00000022553.17	novel	1651	8	NA	NA	-40	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	295.486357553103	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACCTGGGAGTTTGTGG	NA	False	NA	26	True	AATAAA	-18	NA	76237053	76238575	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_76237213_76237337_76237460_76237540_76237665_76237785_76237921_76238046
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043369	chr15	-	1830	17	FSM	ENSMUSG00000022555.13	ENSMUST00000023214.11	1888	17	59	-1	59	1	multi-exon	FALSE	canonical	3	155	junction_16	22.0368122411115	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGGGGTTGTGGAGGCT	NA	False	NA	-4	True	AATAAA	-19	NA	76396092	76386213	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387085_76387158_76387272_76387353_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043384	chr15	+	2073	5	FSM	ENSMUSG00000022560.10	ENSMUST00000023220.10	5289	5	-2	3218	-2	-740	multi-exon	FALSE	canonical	3	110	junction_4	5.2618912949623	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTGTTAATCCCATGAG	NA	False	NA	5	True	AATAAA	-15	NA	76423029	76425590	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_76423396_76423582_76423803_76423893_76424780_76424871_76424996_76425113
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043411	chr15	-	138	1	ISM	ENSMUSG00000115987.2	ENSMUST00000229545.2	1136	8	3845	0	3782	0	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCGCCCTGTGTGATCT	5848	False	NA	-3	True	AATAAA	-39	NA	76506424	76506286	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_-_76506300_76506400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043450	chr15	-	1082	3	NNC	ENSMUSG00000053929.18	novel	1110	3	NA	NA	-18	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	38.5	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGAATTTGTTTATTCT	NA	False	NA	NA	False	AATAAA	-19	NA	76544335	76542335	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_76543066_76543418_76543640_76544204
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043465	chr15	-	1723	3	FSM	ENSMUSG00000033837.6	ENSMUST00000037824.6	1365	3	39	-397	39	397	multi-exon	FALSE	canonical	3	304	junction_2	19.5	392	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAAGTCTGGTATTGGGGG	NA	False	NA	-3	True	AGTAAA	-21	NA	76554109	76552027	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_76553341_76553428_76553534_76553804
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043480	chr15	+	1587	5	FSM	ENSMUSG00000019080.9	ENSMUST00000019224.9	2246	5	-6	665	-6	84	multi-exon	FALSE	canonical	3	46	junction_1	6.01560470775798	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCAGTTTGGATCTTCT	9237	False	NA	16	True	CATAAA	-19	NA	76585658	76587774	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_76586551_76586843_76586992_76587078_76587204_76587273_76587384_76587462
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043490	chr15	-	254	1	ISM	ENSMUSG00000033697.17	ENSMUST00000036176.16	4500	12	93845	0	1365	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTGTGTTTCTTTCAG	8911	False	NA	-4	True	AATAAA	-17	NA	76608438	76608184	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_-_76608200_76608400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043519	chr15	+	1972	6	NNC	ENSMUSG00000003970.10	novel	1020	5	NA	NA	-1714	1109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4480.06724949526	40456	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTCATAGATCTCTGG	NA	False	NA	23	True	NA	NA	NA	76786563	76791623	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_76786608_76788502_76788651_76788738_76788881_76789017_76789237_76790055_76790172_76790320
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043529	chr15	+	889	6	NNC	ENSMUSG00000003970.10	novel	851	6	NA	NA	-38	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4563.73956312145	1522	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGAGCCTCTTTTGT	NA	False	NA	39	True	AATAAA	-23	NA	76788239	76790519	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_76788310_76788502_76788651_76788738_76788881_76789022_76789237_76790055_76790172_76790320
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043557	chr15	+	831	6	NNC	ENSMUSG00000003970.10	novel	851	6	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4459.97675330265	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	False	NA	34	True	AATAAA	-18	NA	76788283	76790514	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_76788310_76788502_76788651_76788738_76788881_76789017_76789237_76790055_76790158_76790320
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043576	chr15	+	842	6	NNC	ENSMUSG00000003970.10	novel	851	6	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4992.72684612327	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	False	NA	34	True	AATAAA	-18	NA	76788284	76790514	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_76788310_76788502_76788645_76788738_76788881_76789017_76789241_76790055_76790172_76790320
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043580	chr15	+	843	6	NNC	ENSMUSG00000003970.10	novel	851	6	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5135.52468984426	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	False	NA	34	True	AATAAA	-18	NA	76788284	76790514	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_76788310_76788502_76788651_76788738_76788881_76789022_76789241_76790055_76790172_76790320
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043583	chr15	+	865	6	NNC	ENSMUSG00000003970.10	novel	851	6	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	4541.14907925296	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	False	NA	34	True	AATAAA	-18	NA	76788284	76790514	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_76788310_76788502_76788651_76788738_76788881_76789017_76789237_76790034_76790172_76790320
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043588	chr15	+	1751	4	NIC	ENSMUSG00000003970.10	novel	851	6	NA	NA	7	0	intron_retention	FALSE	canonical	3	5295	junction_1	2774.76994041348	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	False	NA	34	True	AATAAA	-18	NA	76788284	76790514	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_+_76788310_76788502_76788881_76789017_76790172_76790320
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043594	chr15	+	822	6	NNC	ENSMUSG00000003970.10	novel	851	6	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4563.73956312145	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	False	NA	34	True	AATAAA	-18	NA	76788284	76790514	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_76788310_76788502_76788651_76788738_76788864_76789022_76789237_76790055_76790172_76790320
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043595	chr15	+	823	6	NNC	ENSMUSG00000003970.10	novel	851	6	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4459.97675330265	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	False	NA	34	True	AATAAA	-18	NA	76788284	76790514	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_76788310_76788502_76788651_76788738_76788881_76789017_76789237_76790055_76790151_76790320
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043597	chr15	+	839	6	NNC	ENSMUSG00000003970.10	novel	851	6	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4459.97675330265	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	False	NA	34	True	AATAAA	-18	NA	76788284	76790514	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_76788310_76788502_76788651_76788738_76788881_76789017_76789237_76790055_76790176_76790329
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043602	chr15	+	827	6	NNC	ENSMUSG00000003970.10	novel	851	6	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4563.73956312145	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	False	NA	34	True	AATAAA	-18	NA	76788284	76790514	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_76788310_76788502_76788651_76788738_76788864_76789017_76789237_76790055_76790172_76790320
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043603	chr15	+	826	6	NNC	ENSMUSG00000003970.10	novel	851	6	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4542.52452277365	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	False	NA	34	True	AATAAA	-18	NA	76788284	76790514	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_76788310_76788502_76788651_76788738_76788881_76789017_76789241_76790077_76790172_76790320
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043624	chr15	+	848	6	NNC	ENSMUSG00000003970.10	novel	851	6	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4480.06724949526	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	False	NA	34	True	AATAAA	-18	NA	76788284	76790514	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_76788314_76788502_76788651_76788738_76788881_76789017_76789237_76790055_76790172_76790320
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043627	chr15	+	851	6	NNC	ENSMUSG00000003970.10	novel	851	6	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4480.06724949526	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	False	NA	34	True	AATAAA	-18	NA	76788284	76790514	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_76788317_76788502_76788651_76788738_76788881_76789017_76789237_76790055_76790172_76790320
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043647	chr15	+	971	4	ISM	ENSMUSG00000003970.10	ENSMUST00000229183.2	1020	5	198	0	-3	0	intron_retention	FALSE	canonical	3	10804	junction_2	277.709680541869	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	False	NA	34	True	AATAAA	-18	NA	76788499	76790514	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_+_76788651_76788738_76788881_76789017_76789237_76790055
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043664	chr15	+	1072	5	FSM	ENSMUSG00000063236.7	ENSMUST00000071792.7	1043	5	-21	-8	-21	5	multi-exon	TRUE	canonical	1	74	junction_2	101.489839392917	426	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTGAGAGAGAGAGTTC	NA	False	NA	29	True	AATAAA	-21	NA	76832684	76834937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_76832745_76832828_76833120_76833267_76833353_76833743_76833891_76834448
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043696	chr15	+	523	2	Intergenic	novelGene_141	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTCCTTTTTTCTCCC	NA	False	NA	NA	False	AAGAAA	-19	NA	77240657	77241395	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr15_+_77240860_77241074
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043712	chr15	+	204	1	Intergenic	novelGene_142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTATCAGCCCCTACAAAC	NA	False	NA	NA	False	NA	NA	NA	77717118	77717322	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr15_+_77717100_77717300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043757	chr15	-	131	1	Genic_Genomic	ENSMUSG00000016554.10	novel	NA	NA	NA	NA	1357	4	mono-exon	FALSE	NA	NA	NA	NA	NA	581	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTGCTCCCGTTGTGA	6257	False	NA	-7	True	AATAAA	-28	NA	77843324	77843193	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr15_-_77843200_77843300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043763	chr15	-	1883	15	NNC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	7	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	447.556175929061	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCGTCCTGTGCTCCC	2752	False	NA	-14	True	AATAAA	-21	NA	77855006	77843200	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_77843317_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043791	chr15	-	1124	2	NNC	ENSMUSG00000044986.11	novel	1144	2	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCTGCCTCCTTGCCC	8108	False	NA	-3	True	AATAAA	-17	NA	78290083	78283755	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_78284231_78289434
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043800	chr15	+	765	1	NIC	ENSMUSG00000071711.13	novel	1279	3	NA	NA	57	227	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAAGCATCTCGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	78294238	78295003	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_+_78294200_78295000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043834	chr15	+	362	1	ISM	ENSMUSG00000033128.10	ENSMUST00000041587.8	3034	17	17034	0	2017	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGCTCTTGTCACCCT	5764	False	NA	18	True	AATAAA	-18	NA	78778423	78778785	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_+_78778400_78778800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043863	chr15	+	534	4	NNC	ENSMUSG00000068220.7	novel	628	5	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	939.46663355095	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCCCTTTCATGGGAGA	NA	False	NA	14	True	AATAAA	-25	NA	78810925	78814396	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_78811009_78812169_78812250_78813832_78814005_78814197
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043871	chr15	+	201	1	NIC	ENSMUSG00000068220.7	novel	800	4	NA	NA	3270	5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCCCTTTCATGGGAGA	NA	False	NA	14	True	AATAAA	-25	NA	78814195	78814396	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_+_78814200_78814400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043901	chr15	+	1483	9	NNC	ENSMUSG00000006378.16	novel	2370	9	NA	NA	3	-889	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	431.342598754169	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTCTGCTTTATTCTG	635	False	NA	16	True	NA	NA	NA	78915076	78921664	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920644_78920952_78921075_78921342
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043933	chr15	+	202	1	NIC	ENSMUSG00000033047.6	novel	1942	13	NA	NA	11150	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTTTGTGGTCTCATT	5339	False	NA	25	True	AGTAAA	-15	NA	78978398	78978600	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_+_78978400_78978600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043944	chr15	+	579	5	NNC	ENSMUSG00000033020.8	novel	885	5	NA	NA	-41	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	882.240613438307	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGTTACCTGCGTGCTG	NA	False	NA	28	True	AATAAA	-22	NA	79025509	79035974	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_79025635_79028793_79028868_79030261_79030384_79035535_79035608_79035788
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043956	chr15	+	622	5	FSM	ENSMUSG00000033020.8	ENSMUST00000229973.2	414	5	-28	-180	-13	0	multi-exon	FALSE	canonical	3	17	junction_4	890.483962517012	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGTTACCTGCGTGCTG	NA	False	NA	28	True	AATAAA	-22	NA	79025537	79035974	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_79025635_79028793_79028864_79030252_79030384_79035535_79035674_79035788
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043967	chr15	+	736	4	NNC	ENSMUSG00000033020.8	novel	885	5	NA	NA	-10	-2	intron_retention	FALSE	canonical	0	0	junction_2	963.79354635731	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCCGTTACCTGCGTGC	NA	False	NA	26	True	AATAAA	-20	NA	79025540	79035972	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_79025635_79028793_79028868_79030252_79030384_79035535
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000043995	chr15	+	186	1	FSM	ENSMUSG00000033020.8	ENSMUST00000229978.2	1958	1	1782	-10	675	0	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGTTACCTGCGTGCTG	4840	False	NA	28	True	AATAAA	-22	NA	79035788	79035974	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_79035800_79036000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044000	chr15	+	1971	13	FSM	ENSMUSG00000068206.14	ENSMUST00000018295.14	1977	13	6	0	6	0	multi-exon	FALSE	canonical	3	173	junction_9	26.1878894826512	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGGCTCCTTGCAATG	4389	False	NA	18	True	AATAAA	-18	NA	79113587	79133666	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044002	chr15	+	1818	13	FSM	ENSMUSG00000068206.14	ENSMUST00000163571.8	2054	13	218	18	9	0	multi-exon	FALSE	canonical	3	17	junction_1	62.6245425798331	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGGCTCCTTGCAATG	4392	False	NA	18	True	AATAAA	-18	NA	79113590	79133666	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_79113621_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044017	chr15	+	584	1	Genic_Genomic	ENSMUSG00000042622.15	novel	NA	NA	NA	NA	10093	2	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTATGTCTTGGACTA	NA	False	NA	24	True	AATAAA	-25	NA	79242694	79243278	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr15_+_79242700_79243300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044084	chr15	+	455	1	ISM	ENSMUSG00000042535.10	ENSMUST00000046463.10	3449	12	30180	0	2114	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCATGTTCCCTGCCC	NA	False	NA	17	True	AATAAA	-18	NA	79605225	79605680	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_+_79605200_79605700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044088	chr15	-	1067	1	Genic_Genomic	ENSMUSG00000022420.17	novel	NA	NA	NA	NA	2366	4	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGGTGTATTGAACTT	NA	False	NA	NA	False	ATTAAA	-21	NA	79646716	79645649	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr15_-_79645600_79646700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044125	chr15	-	1474	7	NIC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-4	828	combination_of_known_junctions	FALSE	canonical	3	156	junction_1	121.853737461488	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGGTCCTGATTTGGC	NA	False	NA	NA	False	NA	NA	NA	79855324	79801482	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044148	chr15	-	1483	10	NIC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	-3	2	combination_of_known_junctions	FALSE	canonical	3	214	junction_7	9920.80080773053	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCCCACATTTCTTTTT	3568	False	NA	1	True	AATAAA	-19	NA	79967557	79961989	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965413_79965815_79965985_79966590_79966784_79967524
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044156	chr15	-	1700	9	NIC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	214	junction_6	10263.2056761033	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTCCCACATTTCTT	3572	False	NA	-2	True	AATAAA	-16	NA	79967553	79961992	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_-_79962096_79962187_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965413_79965815_79965985_79966590_79966784_79967524
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044157	chr15	-	1290	10	NNC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	117	junction_5	9864.57571312624	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTCCCACATTTCTT	3568	False	NA	-2	True	AATAAA	-16	NA	79967557	79961992	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964042_79964566_79964754_79965096_79965233_79965815_79965985_79966590_79966784_79967524
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044158	chr15	-	1296	10	NNC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	9613.34052241987	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTCCCACATTTCTT	3568	False	NA	-2	True	AATAAA	-16	NA	79967557	79961992	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590_79966776_79967520
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044159	chr15	-	1292	10	NNC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	453	junction_9	9476.19179253401	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTCCCACATTTCTT	3568	False	NA	-2	True	AATAAA	-16	NA	79967557	79961992	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590_79966776_79967524
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044165	chr15	-	1883	9	FSM	ENSMUSG00000060036.15	ENSMUST00000187578.2	1877	9	-3	-3	-3	-1	multi-exon	FALSE	canonical	3	16287	junction_8	5123.08483118326	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTCCCACATTTCTT	3568	False	NA	-2	True	AATAAA	-16	NA	79967557	79961992	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965985_79966590_79966784_79967524
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044172	chr15	-	2103	8	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	16287	junction_7	5328.95118141249	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTCCCACATTTCTT	3572	False	NA	-2	True	AATAAA	-16	NA	79967553	79961992	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_-_79962096_79962187_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965985_79966590_79966784_79967524
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044177	chr15	-	1293	10	NNC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	9979.59910993732	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTCCCACATTTCTT	3568	False	NA	-2	True	AATAAA	-16	NA	79967557	79961992	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965226_79965815_79965985_79966590_79966784_79967524
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044216	chr15	-	1345	10	NNC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	9979.59910993732	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965286_79965815_79965985_79966590_79966784_79967524
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044236	chr15	-	2622	4	Fusion	ENSMUSG00000060036.15_ENSMUSG00002075255.1	novel	824	5	NA	NA	1	1210	intron_retention	FALSE	canonical	3	16287	junction_3	6785.68278722848	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGCTTGGTAACTGTAA	3572	False	NA	NA	False	NA	NA	NA	79967553	79963241	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr15_-_79964754_79965096_79965985_79966590_79966784_79967524
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044243	chr15	-	507	1	FSM	ENSMUSG00000105167.4	ENSMUST00000199549.4	108	1	-402	3	-402	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGAGTGTTTGAGGCCGA	3568	False	NA	NA	False	NA	NA	NA	79967557	79967050	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_79967000_79967600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044272	chr15	+	1524	1	ISM	ENSMUSG00000022415.13	ENSMUST00000009727.12	4180	4	26634	0	2505	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTGTGTCACTGTGTT	NA	False	NA	20	True	AATAAA	-20	NA	80002178	80003702	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_+_80002200_80003700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044276	chr15	+	638	1	ISM	ENSMUSG00000022414.9	ENSMUST00000023050.9	2964	11	27943	0	27913	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCATCTTGTCTATCTG	2834	False	NA	15	True	AGTAAA	-1	NA	80045270	80045908	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_+_80045300_80045900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044286	chr15	+	1486	4	FSM	ENSMUSG00000042406.9	ENSMUST00000229828.2	659	4	-41	-786	-40	4	multi-exon	FALSE	canonical	3	33	junction_1	614.772044473939	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGTTTTCAGTGTCATT	4105	False	NA	36	True	AATAAA	-24	NA	80139344	80141746	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_80139486_80139768_80139887_80140407_80140723_80140834
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044293	chr15	+	1312	4	NNC	ENSMUSG00000042406.9	novel	1725	3	NA	NA	-26	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	630.303630535845	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGGGTTTTCAGTGT	4458	False	NA	32	True	AATAAA	-20	NA	80139697	80141742	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_80139887_80140407_80140723_80140834_80141228_80141327
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044296	chr15	+	1524	2	ISM	ENSMUSG00000042406.9	ENSMUST00000109605.5	1725	3	313	0	-26	0	intron_retention	FALSE	canonical	3	1378	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGGGTTTTCAGTGT	4458	False	NA	32	True	AATAAA	-20	NA	80139697	80141742	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_+_80139887_80140407
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044299	chr15	+	1391	3	NNC	ENSMUSG00000042406.9	novel	1725	3	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	689	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGGGTTTTCAGTGT	4458	False	NA	32	True	AATAAA	-20	NA	80139697	80141742	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_80139887_80140407_80140702_80140834
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044305	chr15	+	1418	3	NNC	ENSMUSG00000042406.9	novel	1725	3	NA	NA	-26	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	646	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGGGTTTTCAGTGTCA	4458	False	NA	34	True	AATAAA	-22	NA	80139697	80141744	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_80139891_80140407_80140723_80140834
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044321	chr15	-	842	4	NNC	ENSMUSG00000051518.9	novel	838	4	NA	NA	11	2	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	383.503150791055	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAAGTGTGTGTGTGTGTG	NA	False	NA	-3	True	AATAAA	-27	NA	80148505	80144813	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_80145332_80145497_80145596_80148183_80148319_80148414
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044360	chr15	+	542	5	ISM	ENSMUSG00000047888.11	ENSMUST00000067689.9	17332	25	-65	82331	-65	-22734	5prime_fragment	FALSE	canonical	1	2	junction_2	3.57071421427143	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCACCCAGAAGGTGAGT	NA	False	NA	NA	False	GATAAA	-11	NA	80595448	80742955	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_+_80595690_80631606_80631675_80643740_80643832_80668939_80669008_80742881
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044363	chr15	+	471	4	NIC	ENSMUSG00000047888.11	novel	17332	25	NA	NA	-58	-22730	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	4.02768199119819	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCAGAAGGTGAGTTGAG	NA	False	NA	NA	False	GATAAA	-15	NA	80595455	80742959	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_+_80595690_80643740_80643832_80668939_80669008_80742881
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044413	chr15	-	1914	1	Genic_Genomic	ENSMUSG00000022403.16	novel	NA	NA	NA	NA	20345	1	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGACCTTCCCCCATTTG	2079	False	NA	-18	True	AATAAA	-19	NA	81249782	81247868	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr15_-_81247900_81249800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044601	chr15	-	1270	8	FSM	ENSMUSG00000022474.16	ENSMUST00000023112.12	1300	8	38	-8	-23	8	multi-exon	FALSE	canonical	3	940	junction_3	83.919543587405	1435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTCTGTCTGAAGACA	NA	False	NA	5	True	ATTAAA	-22	NA	81845093	81835300	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044608	chr15	-	1240	8	NNC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	387.014844412871	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTTTGCTCTGTCTG	NA	False	NA	-1	True	ATTAAA	-16	NA	81845065	81835306	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81840558_81840640_81841993_81842112_81844915
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044617	chr15	-	1053	6	NNC	ENSMUSG00000022474.16	novel	1059	7	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	428.383659819093	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	NA	False	NA	-3	True	ATTAAA	-14	NA	81845065	81835308	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81844901
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044645	chr15	-	1459	6	FSM	ENSMUSG00000022472.17	ENSMUST00000152227.8	2934	6	0	1475	0	-151	multi-exon	FALSE	canonical	3	162	junction_5	9.30806102257608	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGTCTGAGAATTAGTT	NA	False	NA	-2	True	AATAAA	-31	NA	81900364	81878198	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_81879047_81882310_81882434_81883705_81883816_81886741_81886812_81887958_81887981_81900078
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044673	chr15	-	1267	3	NNC	ENSMUSG00000063480.9	novel	2077	3	NA	NA	-6	141	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	1617.5	78	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCAGCTGTGCCTGATT	4900	False	NA	-19	True	AATAAA	-28	NA	81931805	81925537	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_81926570_81928097_81928215_81931687
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044684	chr15	+	936	2	ISM	ENSMUSG00000022463.9	ENSMUST00000231065.2	2664	3	0	3197	0	267	5prime_fragment	FALSE	canonical	3	751	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCCATCAGATCTGAGC	2238	False	NA	NA	False	AATAAA	-18	NA	82031446	82054629	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_+_82031692_82053938
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044704	chr15	-	1242	6	FSM	ENSMUSG00000068101.12	ENSMUST00000089157.11	1202	6	-18	-22	-18	22	multi-exon	FALSE	canonical	3	1067	junction_2	108.849253557386	1546	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCAGTGGTGGCGCAC	NA	False	NA	NA	False	NA	NA	NA	82128967	82117957	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333_82128414_82128823
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044747	chr15	-	1718	9	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	-9	-13	combination_of_known_junctions	FALSE	canonical	3	27	junction_6	86.2554346113913	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTTCTAATCAACCAGG	1354	False	NA	-13	True	AATAAA	-18	NA	82223017	82213745	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82221587_82221724_82222438_82222516_82222952
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044758	chr15	-	1239	7	FSM	ENSMUSG00000022453.9	ENSMUST00000230380.2	1020	7	-54	-165	-10	165	multi-exon	FALSE	canonical	3	267	junction_3	11.7106314470608	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTGTGTTGGGGTCTTC	1334	False	NA	NA	False	ACTAAA	-14	NA	82223037	82218652	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222438_82222516_82222952
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044774	chr15	+	605	3	NNC	ENSMUSG00000022452.17	novel	705	3	NA	NA	1	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	801.5	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGTCCCCATTTCTCACT	NA	False	NA	38	True	AATAAA	-20	NA	82230215	82233268	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_82230471_82232100_82232242_82233059
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044780	chr15	+	608	3	NNC	ENSMUSG00000022452.17	novel	705	3	NA	NA	6	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	676.5	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCGTCCCCATTTCTCA	NA	False	NA	36	True	AATAAA	-18	NA	82230220	82233266	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_82230465_82232100_82232242_82233043
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044812	chr15	-	235	1	Genic_Genomic	ENSMUSG00000022450.7	novel	NA	NA	NA	NA	834	1	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGTCTCTCTTACTTC	9826	False	NA	-12	True	GATAAA	-22	NA	82234574	82234339	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr15_-_82234300_82234600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044829	chr15	-	488	3	NNC	ENSMUSG00000022450.7	novel	590	3	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_2	1947	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCACTGGTGAACCCCTTT	6281	False	NA	-32	True	AATAAA	-31	NA	82238454	82234359	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_82234573_82235179_82235282_82238281
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044844	chr15	-	614	1	ISM	ENSMUSG00000041852.16	ENSMUST00000048966.7	7417	5	103074	11	90751	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTTTTCATTTACTCT	NA	False	NA	-16	True	AATAAA	-17	NA	82693261	82692647	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_-_82692600_82693300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044847	chr15	-	442	1	ISM	ENSMUSG00000041852.16	ENSMUST00000048966.7	7417	5	102589	668	90266	-478	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTATTTTTATTTTTT	NA	False	NA	0	True	AATAAA	-24	NA	82693746	82693304	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_-_82693300_82693700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044863	chr15	+	1282	11	NNC	ENSMUSG00000058586.13	novel	1371	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.311854930052	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCAAGTGGCTGTTGTCA	NA	False	NA	18	True	AATAAA	-19	NA	82984489	83000876	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_82984549_82985844_82985995_82986072_82986187_82986499_82986557_82987134_82987210_82988509_82988623_82989811_82989892_82996410_82996446_82998557_82998641_82999767_82999865_83000457
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044871	chr15	-	1933	7	FSM	ENSMUSG00000018040.10	ENSMUST00000018184.10	4363	7	27	2403	-23	12	multi-exon	FALSE	canonical	3	832	junction_3	73.7437379639037	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAGCTCTTGACTAGATA	NA	False	NA	NA	False	AATAAA	-25	NA	83006975	83000036	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092_83004219_83006032_83006176_83006862
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044875	chr15	-	1916	7	NNC	ENSMUSG00000018040.10	novel	4363	7	NA	NA	-12	2	intron_retention	FALSE	canonical	0	0	junction_3	348.571569249256	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTCTCCTGAGCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	83006964	83000046	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_83001173_83001749_83001949_83002277_83002376_83003381_83003504_83004092_83004219_83006032_83006176_83006862
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044902	chr15	-	2073	9	FSM	ENSMUSG00000018042.19	ENSMUST00000018186.16	2422	9	349	0	349	0	multi-exon	FALSE	canonical	3	1513	junction_1	61.7454451761423	303	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCAGCGTTTCTCTGGG	NA	False	NA	0	True	AGTAAA	-18	NA	83056444	83037694	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044924	chr15	-	1187	3	FSM	ENSMUSG00000054277.9	ENSMUST00000226816.2	1186	3	0	-1	0	0	multi-exon	FALSE	canonical	2	5	junction_2	31.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTTGCCTGTGTTGTCA	NA	False	NA	-26	True	AATATA	-16	NA	83189542	83183939	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_83184904_83187303_83187426_83189441
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044952	chr15	-	1281	2	ISM	ENSMUSG00000048755.10	ENSMUST00000229724.2	688	3	3635	-1030	3635	0	3prime_fragment	FALSE	canonical	3	226	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTCTCTCTCTCTGTG	NA	False	NA	0	True	AATAAA	-23	NA	83433453	83430997	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_-_83432144_83433318
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044961	chr15	+	827	4	NNC	ENSMUSG00000041736.8	novel	837	4	NA	NA	7	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	118.35633579248	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAACAGACTCTGTACT	NA	False	NA	14	True	AATAAA	-14	NA	83447799	83458397	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_83447846_83455585_83455801_83456400_83456540_83457970
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044983	chr15	+	1593	1	Intergenic	novelGene_143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGTCTCTTCTGCCTC	NA	False	NA	14	True	AATAAA	-25	NA	84072131	84073724	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr15_+_84072100_84073700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000044997	chr15	+	1688	15	NNC	ENSMUSG00000022437.8	novel	4629	15	NA	NA	-20	-2963	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	489.353425971663	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGTCCTGGATGTGGTC	NA	False	NA	28	True	AATAAA	-14	NA	84076421	84098505	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084081_84084493_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095382_84098326
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045015	chr15	+	1665	15	NNC	ENSMUSG00000022437.8	novel	4629	15	NA	NA	-1	-2963	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	484.902914751699	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGTCCTGGATGTGGTC	NA	False	NA	28	True	AATAAA	-14	NA	84076440	84098505	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084081_84084493_84084625_84084830_84084917_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095380_84098326
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045016	chr15	+	1662	15	NNC	ENSMUSG00000022437.8	novel	4629	15	NA	NA	-1	-2963	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	477.308675207744	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGTCCTGGATGTGGTC	NA	False	NA	28	True	AATAAA	-14	NA	84076440	84098505	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084076_84084493_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095380_84098326
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045018	chr15	+	1672	15	NNC	ENSMUSG00000022437.8	novel	4629	15	NA	NA	-1	-2963	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	477.308675207744	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGTCCTGGATGTGGTC	NA	False	NA	28	True	AATAAA	-14	NA	84076440	84098505	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084086_84084493_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095380_84098326
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045052	chr15	-	749	2	ISM	ENSMUSG00000116396.2	ENSMUST00000229841.2	1237	3	1384	-52	1384	52	3prime_fragment	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTGCACGAATGTTCT	NA	False	NA	NA	False	AATATA	-17	NA	84603083	84598777	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_-_84599341_84602897
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045067	chr15	+	1070	1	ISM	ENSMUSG00000016619.11	ENSMUST00000165443.4	4766	8	18483	0	18445	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTGGGTACTGTTCTGTT	NA	False	NA	19	True	AATAAA	-19	NA	84826094	84827164	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_+_84826100_84827200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045078	chr15	+	1156	1	ISM	ENSMUSG00000022434.9	ENSMUST00000023069.9	2518	9	24586	0	7978	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTTTTTC	NA	False	NA	8	True	AATAAA	-15	NA	84945875	84947031	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_+_84945900_84947000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045089	chr15	+	2225	15	FSM	ENSMUSG00000006369.15	ENSMUST00000109432.4	2273	15	49	-1	49	1	multi-exon	TRUE	canonical	3	356	junction_14	63.5701845785187	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGTACCTTGGTTTT	NA	False	NA	36	True	AATAAA	-26	NA	85090254	85136087	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85135645
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045098	chr15	+	812	1	NIC	ENSMUSG00000016541.11	novel	1937	12	NA	NA	12	-126144	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCGAGGCTGTCAGTTC	NA	False	NA	16	True	AATAAA	-16	NA	85220457	85221269	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_+_85220500_85221300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045113	chr15	-	932	4	NNC	ENSMUSG00000064284.13	novel	997	5	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	153.319564599202	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGTTTGAGTCACTG	8733	False	NA	0	True	ATTAAA	-15	NA	85695250	85691172	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_85691732_85692456_85692569_85693412_85693526_85695102
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045120	chr15	-	1514	4	FSM	ENSMUSG00000064284.13	ENSMUST00000125947.8	706	4	-533	-275	21	0	multi-exon	FALSE	canonical	3	301	junction_1	22.0151463012778	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGTTTGAGTCACTG	8159	False	NA	0	True	ATTAAA	-15	NA	85695824	85691172	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045135	chr15	-	568	1	NIC	ENSMUSG00000064284.13	novel	997	5	NA	NA	3551	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGTTTGAGTCACTG	NA	False	NA	0	True	ATTAAA	-15	NA	85691740	85691172	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_-_85691200_85691700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045142	chr15	+	247	1	ISM	ENSMUSG00000022385.12	ENSMUST00000231074.2	2692	11	16381	0	16381	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGACGTGTAGAGCTG	NA	False	NA	30	True	ATTAAA	-41	NA	85760527	85760774	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_+_85760500_85760800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045169	chr15	+	416	1	ISM	ENSMUSG00000051864.11	ENSMUST00000063414.9	3229	13	283629	0	262583	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTTTTTATTGCATT	NA	False	NA	8	True	AATAAA	-17	NA	86382288	86382704	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_+_86382300_86382700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045190	chr15	+	193	1	Intergenic	novelGene_144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAACCCTGCCTGGGAT	NA	False	NA	NA	False	NA	NA	NA	88611280	88611473	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr15_+_88611300_88611500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045200	chr15	-	149	1	Intergenic	novelGene_145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTCGGTGTCTCTTCCTG	NA	False	NA	NA	False	GATAAA	-44	NA	88695216	88695067	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr15_-_88695100_88695200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045207	chr15	+	1368	10	NNC	ENSMUSG00000023272.5	novel	1366	10	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	23	junction_4	331.77427995477	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGACGTGTTGGTTTGTTT	NA	False	NA	17	True	AATAAA	-26	NA	88703844	88710886	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_88704038_88704133_88704217_88704731_88704843_88705337_88705430_88706163_88706339_88707269_88707366_88707944_88708029_88708850_88708947_88709352_88709494_88710589
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045220	chr15	+	297	1	ISM	ENSMUSG00000023272.5	ENSMUST00000024042.5	1366	10	6741	0	6741	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGACGTGTTGGTTTGTTT	436	False	NA	17	True	AATAAA	-26	NA	88710589	88710886	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_+_88710600_88710900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045224	chr15	+	1061	1	ISM	ENSMUSG00000035828.12	ENSMUST00000042818.11	2427	6	2480	0	-254	0	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCTGTTTATTGGACT	NA	False	NA	30	True	ATTAAA	-20	NA	88748868	88749929	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_+_88748900_88749900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045273	chr15	+	2020	20	NNC	ENSMUSG00000008690.16	novel	3299	20	NA	NA	-3	17	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	318.874344602117	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTCACCGGACAGACTA	NA	False	NA	15	True	AATAAA	-15	NA	89239962	89255783	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_89240134_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254516_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045390	chr15	-	843	8	NNC	ENSMUSG00000022635.10	novel	877	8	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	233.163602018245	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTGTGGAATAGTGAC	NA	False	NA	-11	True	AATAAA	-17	NA	93296190	93283990	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_93284168_93285457_93285534_93285627_93285736_93288931_93289040_93289334_93289447_93293467_93293497_93295050_93295137_93296043
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045453	chr15	-	864	3	NNC	ENSMUSG00000045608.8	novel	477	3	NA	NA	-59	368	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	17.5	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCTCTCCAAGTTTTAT	NA	False	NA	-11	True	ATTAAA	-16	NA	95530768	95522250	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_95522899_95530158_95530347_95530740
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045473	chr15	+	406	3	Antisense	novelGene_ENSMUSG00000097536.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	4.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGCAGCACTCCTCCAT	NA	False	NA	NA	False	NA	NA	NA	96080420	96089528	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr15_+_96080575_96080750_96080932_96089457
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045545	chr15	-	1763	4	NIC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-35	945	combination_of_known_junctions	FALSE	canonical	3	708	junction_3	16.5797734872612	827	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGCTTGCTTGCTTGCT	NA	False	NA	-1	True	NA	NA	NA	97065160	97057868	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_-_97059277_97059835_97059964_97064383_97064508_97065057
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045603	chr15	-	2277	17	FSM	ENSMUSG00000022466.7	ENSMUST00000023104.7	2271	17	-3	-3	-3	3	multi-exon	FALSE	canonical	3	236	junction_16	35.978292066189	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCGATATTTCATTTTAT	NA	False	NA	0	True	AATAAA	-28	NA	97603709	97572974	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_97573261_97576266_97576368_97576950_97577049_97578215_97578403_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589192_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082_97601251_97603630
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045631	chr15	-	1031	3	ISM	ENSMUSG00000022483.18	ENSMUST00000088355.12	4862	53	27273	0	11537	0	3prime_fragment	FALSE	canonical	3	15	junction_2	1	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGACTTGTGTTTTGT	9670	False	NA	NA	False	ATTAAA	-31	NA	97875265	97873482	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_-_97874068_97874522_97874766_97875062
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045640	chr15	-	522	2	ISM	ENSMUSG00000033075.18	ENSMUST00000181349.2	2830	9	-166	23762	33	1691	5prime_fragment	FALSE	canonical	3	84	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCCTATTGGCAGAACT	6176	False	NA	NA	False	AAAAAG	-9	NA	97991417	97984746	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_-_97985015_97991163
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045655	chr15	-	2183	4	FSM	ENSMUSG00000048175.14	ENSMUST00000123626.8	1100	4	-6	-1077	-6	0	multi-exon	FALSE	canonical	3	84	junction_3	16.7531091641721	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCACTTCCAGTTTCT	NA	False	NA	0	True	AATAAA	-21	NA	98043593	98032517	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_98034320_98039164_98039270_98040531_98040696_98043481
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045664	chr15	-	731	1	ISM	ENSMUSG00000022992.18	ENSMUST00000230542.2	3596	10	14726	1150	9915	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTGGATCGATTGTGT	NA	False	NA	-9	True	ATTAAA	-26	NA	98417419	98416688	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_-_98416700_98417400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045677	chr15	-	1103	6	NNC	ENSMUSG00000011960.13	novel	2015	3	NA	NA	-56	-2481	intron_retention	FALSE	canonical	3	14	junction_1	12.5123938556936	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGAATTTATTTCTA	NA	False	NA	NA	False	ATTAAA	-25	NA	98465617	98449013	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_98449521_98449794_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045687	chr15	-	1637	5	FSM	ENSMUSG00000054855.14	ENSMUST00000003451.11	2203	5	0	566	0	-566	multi-exon	FALSE	canonical	3	35	junction_3	4.54835134966506	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGTTTTGTTGTTGTTGT	NA	False	NA	NA	False	AATATA	-18	NA	98575342	98567651	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_98568724_98570391_98570527_98571726_98571837_98574367_98574456_98575110
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045694	chr15	-	759	6	FSM	ENSMUSG00000003355.8	ENSMUST00000003445.8	734	6	-15	-10	-15	6	multi-exon	FALSE	canonical	3	632	junction_4	33.5177564881661	1932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCACTCGGTACTGCC	NA	False	NA	NA	False	AATAAA	-25	NA	98626094	98622240	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_98622484_98624364_98624436_98624780_98624815_98625091_98625180_98625563_98625630_98625837
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045705	chr15	-	623	5	NNC	ENSMUSG00000003355.8	novel	734	6	NA	NA	530	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	286.193116618831	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTATTTTTCACTCGGT	NA	False	NA	NA	False	AATAAA	-19	NA	98625491	98622246	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_98622484_98624364_98624436_98624780_98624815_98625091_98625180_98625298
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045707	chr15	-	702	6	NNC	ENSMUSG00000003355.8	novel	734	6	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	270.583074119576	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTATTTTTCACTCGGT	NA	False	NA	NA	False	AATAAA	-19	NA	98626049	98622246	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_98622484_98624364_98624436_98624780_98624815_98625091_98625180_98625563_98625624_98625837
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045714	chr15	-	719	6	NNC	ENSMUSG00000003355.8	novel	734	6	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	267.778266481804	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTATTTTTCACTCGGT	NA	False	NA	NA	False	AATAAA	-19	NA	98626065	98622246	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_98622484_98624364_98624436_98624785_98624815_98625091_98625180_98625563_98625630_98625837
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045736	chr15	-	1046	5	NIC	ENSMUSG00000003355.8	novel	734	6	NA	NA	-11	2	intron_retention	FALSE	canonical	3	632	junction_3	34.4456092992997	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGTATTTTTCACTCG	NA	False	NA	NA	False	AATAAA	-17	NA	98626044	98622248	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_-_98622484_98624364_98624815_98625091_98625180_98625563_98625630_98625837
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045738	chr15	-	704	6	NNC	ENSMUSG00000003355.8	novel	734	6	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	273.610233726738	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGTATTTTTCACTCG	NA	False	NA	NA	False	AATAAA	-17	NA	98626043	98622248	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_98622484_98624364_98624436_98624780_98624815_98625087_98625180_98625563_98625630_98625837
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045745	chr15	-	619	5	ISM	ENSMUSG00000003355.8	ENSMUST00000003445.8	734	6	325	-2	267	2	3prime_fragment	FALSE	canonical	3	632	junction_4	37.4658177543211	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGTATTTTTCACTCG	NA	False	NA	NA	False	AATAAA	-17	NA	98625754	98622248	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_-_98622484_98624364_98624436_98624780_98624815_98625091_98625180_98625563
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045780	chr15	-	1644	12	FSM	ENSMUSG00000067713.8	ENSMUST00000168846.3	1652	12	13	-5	13	5	multi-exon	FALSE	canonical	3	244	junction_11	39.9075377622816	620	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGATTTCTGCATTTG	9362	False	NA	1	True	ATTAAA	-27	NA	98729389	98710672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98729310
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045811	chr15	-	2175	17	FSM	ENSMUSG00000022999.16	ENSMUST00000023736.10	2304	17	133	-4	-43	4	multi-exon	FALSE	canonical	3	43	junction_9	10.4395581803063	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCCCTGTGTCTATCTGA	NA	False	NA	1	True	AATAAA	-39	NA	98815979	98801793	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_98802390_98802545_98802708_98803796_98803864_98804124_98804216_98805417_98805492_98805774_98805853_98806400_98806478_98806556_98806641_98806729_98806803_98807083_98807149_98807268_98807338_98809376_98809504_98810024_98810129_98810278_98810419_98811437_98811472_98813017_98813103_98815730
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045828	chr15	-	1139	1	NIC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	1875	0	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCTGGATACTTTGT	2033	False	NA	NA	False	AGTAAA	-18	NA	98830444	98829305	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_-_98829300_98830400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045833	chr15	-	1620	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2236.04000162987	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCTGGATACTTTG	157	False	NA	NA	False	AGTAAA	-17	NA	98832320	98829306	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_98830444_98830572_98830722_98830853_98831077_98832209
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045838	chr15	-	1605	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5258.74321698847	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTTCTGGATACTTT	158	False	NA	NA	False	AGTAAA	-16	NA	98832319	98829307	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_98830435_98830572_98830722_98830853_98831077_98832213
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045841	chr15	-	1606	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5428.71795792217	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTTCTGGATACTTT	160	False	NA	NA	False	AGTAAA	-16	NA	98832317	98829307	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_98830444_98830572_98830716_98830853_98831077_98832213
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045843	chr15	-	1608	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2236.04000162987	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTTCTGGATACTTT	158	False	NA	NA	False	AGTAAA	-16	NA	98832319	98829307	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_98830444_98830572_98830722_98830853_98831071_98832213
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045844	chr15	-	1746	3	NIC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	0	-2	intron_retention	FALSE	canonical	3	3388	junction_1	4721	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTTCTGGATACTTT	158	False	NA	NA	False	AGTAAA	-16	NA	98832319	98829307	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_-_98830444_98830572_98831077_98832213
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045847	chr15	-	1610	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2236.04000162987	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTTCTGGATACTTT	160	False	NA	NA	False	AGTAAA	-16	NA	98832317	98829307	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_98830444_98830572_98830722_98830853_98831071_98832209
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045858	chr15	-	1873	2	FSM	ENSMUSG00000023004.9	ENSMUST00000140969.2	526	2	2	-1349	2	-2	multi-exon	FALSE	canonical	3	12830	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTTCTGGATACTTT	160	False	NA	NA	False	AGTAAA	-16	NA	98832317	98829307	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_98831077_98832213
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045924	chr15	+	391	1	ISM	ENSMUSG00000051934.6	ENSMUST00000063517.6	3096	13	86269	0	86003	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTAGCGCCGTCTCTCT	NA	False	NA	18	True	AATAAA	-23	NA	99110705	99111096	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_+_99110700_99111100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045929	chr15	-	1912	15	FSM	ENSMUSG00000037570.17	ENSMUST00000041190.17	1916	15	4	0	-2	0	multi-exon	FALSE	canonical	3	647	junction_2	85.1129201923742	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTTTATTTTTTTTTA	NA	False	NA	1	True	AATAAA	-21	NA	99149838	99140697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99149742
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045961	chr15	-	1278	2	FSM	ENSMUSG00000037525.6	ENSMUST00000040313.6	1276	2	0	-2	0	2	multi-exon	FALSE	canonical	3	84	junction_1	0	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCGTTTCTTTGCTCT	NA	False	NA	2	True	ATTAAA	-21	NA	99372611	99367957	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_99368961_99372336
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045971	chr15	-	2901	17	FSM	ENSMUSG00000023015.15	ENSMUST00000023756.12	2933	17	33	-1	-11	0	multi-exon	FALSE	canonical	3	453	junction_16	66.1194172974173	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTGGTTTTCTTGTC	NA	False	NA	0	True	AATAAA	-20	NA	99549504	99518376	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045978	chr15	+	417	2	ISM	ENSMUSG00000023018.6	ENSMUST00000229236.2	1842	12	-21	9518	-21	-507	5prime_fragment	FALSE	canonical	3	287	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGATGACCCCTGGGGGT	7682	False	NA	10	True	NA	NA	NA	99600150	99601174	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_+_99600380_99600986
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000045992	chr15	+	476	1	NIC	ENSMUSG00000023020.4	novel	2090	2	NA	NA	1966	548	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGTCTCTCTCTTTCTT	NA	False	NA	29	True	AGTAAA	-36	NA	99625523	99625999	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_+_99625500_99626000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046027	chr15	+	2345	7	FSM	ENSMUSG00000023027.14	ENSMUST00000023769.11	2365	7	24	-4	24	4	multi-exon	FALSE	canonical	3	255	junction_1	32.1334024895521	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTCGGAATGCAAAACAT	NA	False	NA	17	True	ATTAAA	-20	NA	100125723	100159129	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046053	chr15	-	1236	1	ISM	ENSMUSG00000044636.7	ENSMUST00000061457.7	4375	5	14683	0	14683	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGGGTTCTTTATCTT	NA	False	NA	2	True	ATTAAA	-17	NA	100378686	100377450	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_-_100377400_100378700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046080	chr15	-	949	4	FSM	ENSMUSG00000053559.14	ENSMUST00000172334.9	920	4	81	-110	-4	0	multi-exon	FALSE	canonical	3	417	junction_3	158.779371736032	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTTGTTCTGCTTAA	NA	False	NA	16	True	ATTAAA	-37	NA	100534740	100519219	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_100519908_100520509_100520591_100534067_100534137_100534629
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046128	chr15	-	1320	3	FSM	ENSMUSG00000097915.3	ENSMUST00000229239.2	484	3	-6	-830	-6	0	multi-exon	FALSE	canonical	3	7	junction_2	0.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCGCCTCTGCTTCTGTGT	NA	False	NA	NA	False	AATAAA	-13	NA	101122664	101119075	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_101120071_101121361_101121515_101122492
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046138	chr15	+	384	1	ISM	ENSMUSG00000023034.8	ENSMUST00000228985.2	2553	8	20143	0	1551	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTTTTTTTCTGTTT	NA	False	NA	19	True	AATAAA	-21	NA	101172292	101172676	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_+_101172300_101172700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046155	chr15	+	1045	8	NNC	ENSMUSG00000023039.18	novel	3563	8	NA	NA	2678	17	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	10.6885404971485	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGGAGTGGTACTCACAG	NA	False	NA	23	True	AATAAA	-30	NA	101313007	101325687	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_101313056_101314101_101314163_101316198_101316295_101317383_101317549_101318354_101318481_101321150_101321372_101324969_101325005_101325394
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046172	chr15	+	2412	7	NNC	ENSMUSG00000058655.10	novel	3854	15	NA	NA	4023	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	325.506656357951	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTAATGTTGCAGTTTAT	NA	False	NA	49	True	AATAAA	-19	NA	101998481	102005608	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_101998530_101999831_101999930_102001420_102001531_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046174	chr15	+	775	7	NNC	ENSMUSG00000058655.10	novel	3854	15	NA	NA	4023	237	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	326.52297009552	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTCTAAACTTTTTTT	NA	False	NA	17	True	AATAAA	-17	NA	101998481	102003871	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003415_102003485_102003687
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046175	chr15	+	783	7	NNC	ENSMUSG00000058655.10	novel	3854	15	NA	NA	4023	237	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	336.882975065361	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTCTAAACTTTTTTT	NA	False	NA	17	True	AATAAA	-17	NA	101998481	102003871	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003489_102003687
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046192	chr15	+	220	1	ISM	ENSMUSG00000037003.17	ENSMUST00000169627.9	4761	29	13248	0	1043	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGTTGATACCTTCTTC	NA	False	NA	NA	False	AATAAA	-19	NA	102024616	102024836	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_+_102024600_102024800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046224	chr15	+	351	1	NIC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	1319	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	7726	False	NA	17	True	AATAAA	-17	NA	102232441	102232792	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_+_102232400_102232800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046229	chr15	+	645	6	NNC	ENSMUSG00000001289.13	novel	1062	6	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	358.045471972486	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTGGTCTATTCTTGCA	364	False	NA	30	True	AATAAA	-18	NA	102234580	102239925	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_102234696_102234871_102234971_102235252_102235285_102236956_102237032_102237146_102237253_102239707
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046230	chr15	+	645	6	NNC	ENSMUSG00000001289.13	novel	1062	6	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	353.63223834939	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTGGTCTATTCTTGCA	364	False	NA	30	True	AATAAA	-18	NA	102234580	102239925	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_102234696_102234867_102234971_102235252_102235285_102236956_102237032_102237150_102237253_102239707
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046231	chr15	+	632	5	NNC	ENSMUSG00000001289.13	novel	570	5	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	375.640369901852	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTGGTCTATTCTTGCA	364	False	NA	30	True	AATAAA	-18	NA	102234580	102239925	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_102234696_102234867_102234986_102236956_102237032_102237146_102237253_102239707
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046240	chr15	+	599	5	FSM	ENSMUSG00000001289.13	ENSMUST00000001335.7	570	5	-25	-4	-4	4	multi-exon	FALSE	canonical	3	11	junction_2	370.883741892254	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTGGTCTATTCTTGCA	382	False	NA	30	True	AATAAA	-18	NA	102234598	102239925	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_102234696_102234867_102234971_102236956_102237032_102237146_102237253_102239707
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046241	chr15	+	581	6	NNC	ENSMUSG00000001289.13	novel	1062	6	NA	NA	-4	4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	350.749483249798	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTGGTCTATTCTTGCA	382	False	NA	30	True	AATAAA	-18	NA	102234598	102239925	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_102234696_102234867_102234921_102235252_102235285_102236956_102237032_102237146_102237253_102239707
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046244	chr15	+	528	5	FSM	ENSMUSG00000001289.13	ENSMUST00000062492.11	464	5	16	-80	-4	4	multi-exon	FALSE	canonical	2	16	junction_1	382.106660502012	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTGGTCTATTCTTGCA	382	False	NA	30	True	AATAAA	-18	NA	102234598	102239925	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_102234696_102235252_102235285_102236956_102237032_102237146_102237253_102239707
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046258	chr15	+	433	2	ISM	ENSMUSG00000001289.13	ENSMUST00000165671.8	830	4	2212	-28	2193	4	3prime_fragment	FALSE	canonical	3	877	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTGGTCTATTCTTGCA	2821	False	NA	30	True	AATAAA	-18	NA	102237037	102239925	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_+_102237253_102239707
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046324	chr15	+	1919	3	FSM	ENSMUSG00000023048.14	ENSMUST00000164688.2	1020	3	-869	-30	12	0	multi-exon	FALSE	canonical	3	623	junction_2	60	248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCTAGTTTTGTTACTC	2417	False	NA	40	True	AATAAA	-43	NA	102367648	102371241	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_102368582_102368804_102369155_102370605
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046367	chr15	+	1228	10	NNC	ENSMUSG00000056851.15	novel	3222	14	NA	NA	-31	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	170.421699192197	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTTCTTTGTGAATAGA	6055	False	NA	13	True	ATTAAA	-13	NA	102383019	102407324	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_102383127_102387050_102387187_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046421	chr15	+	1661	8	ISM	ENSMUSG00000023051.12	ENSMUST00000023813.9	1523	9	-4	0	0	0	intron_retention	TRUE	canonical	3	312	junction_3	28	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTTCTTTTTTGTTA	NA	False	NA	NA	False	AATAAA	-27	NA	102426889	102432111	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_+_102427038_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046423	chr15	+	1505	9	NIC	ENSMUSG00000023051.12	novel	782	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	96.5083383703191	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTTCTTTTTTGTTA	NA	False	NA	NA	False	AATAAA	-27	NA	102427153	102432111	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_+_102427280_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046434	chr15	+	615	1	ISM	ENSMUSG00000023051.12	ENSMUST00000136968.2	2732	2	4635	0	2022	0	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTTCTTTTTTGTTA	NA	False	NA	NA	False	AATAAA	-27	NA	102431496	102432111	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_+_102431500_102432100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046438	chr15	+	511	2	Antisense	novelGene_ENSMUSG00000099083.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCCTTTGTTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	102511428	102516449	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr15_+_102511544_102516053
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046446	chr15	-	381	2	Antisense	novelGene_ENSMUSG00000036305.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTCTTTTCTTTATTC	NA	False	NA	NA	False	NA	NA	NA	102571168	102543416	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr15_-_102543767_102571137
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046475	chr15	-	665	5	NNC	ENSMUSG00000062683.12	novel	731	5	NA	NA	80	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1937.98250443599	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	3981	False	NA	-11	True	AATAAA	-17	NA	102579482	102571298	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_-_102571564_102573488_102573683_102574183_102574291_102576145_102576215_102579452
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046503	chr15	-	907	2	Antisense	novelGene_ENSMUSG00000001655.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTATTATTGATTTTTCC	NA	False	NA	0	True	NA	NA	NA	102840091	102835257	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr15_-_102835785_102839711
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046509	chr15	-	668	2	Antisense	novelGene_ENSMUSG00000001655.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTGGGGTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-42	NA	102840091	102837209	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr15_-_102837498_102839711
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046512	chr15	-	523	2	Antisense	novelGene_ENSMUSG00000001655.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTTTGTGGGGTTTTTTT	NA	False	NA	NA	False	AATAAA	-39	NA	102840091	102837212	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr15_-_102837356_102839711
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046523	chr15	+	1749	2	FSM	ENSMUSG00000075394.5	ENSMUST00000100164.5	1983	2	234	0	234	0	multi-exon	FALSE	canonical	3	38	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCAATGTCTGATGGTTTC	6206	False	NA	30	True	AATAAA	-24	NA	102943054	102945278	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_+_102943588_102944062
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046546	chr15	-	783	1	ISM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	40856	6634	16345	1077	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCGTCAGCTACTGAGC	NA	False	NA	-23	True	AATAAA	-23	NA	103107387	103106604	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_-_103106600_103107400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046569	chr15	+	1777	10	NNC	ENSMUSG00000046434.17	novel	1737	10	NA	NA	-19	2	at_least_one_novel_splicesite	FALSE	canonical	1	35	junction_2	3995.90984710276	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATGACAACTGTATGGA	NA	False	NA	1	True	AATAAA	-19	NA	103148839	103153384	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_103148956_103149506_103149621_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046576	chr15	+	1763	10	NNC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	4261.66086559376	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATGACAACTGTATGGA	NA	False	NA	1	True	AATAAA	-19	NA	103148858	103153384	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150902_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046579	chr15	+	1758	10	NNC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	4261.66086559376	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATGACAACTGTATGGA	NA	False	NA	1	True	AATAAA	-19	NA	103148858	103153384	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150897_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046597	chr15	+	1146	5	NNC	ENSMUSG00000046434.17	novel	3118	13	NA	NA	2163	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6052.45565865624	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATGACAACTGTATGGA	NA	False	NA	1	True	AATAAA	-19	NA	103151083	103153384	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_103151146_103151348_103151505_103152051_103152208_103152385_103152456_103152682
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046605	chr15	+	990	4	NNC	ENSMUSG00000046434.17	novel	3118	13	NA	NA	2168	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5436.72526026059	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATGACAACTGTATGGA	NA	False	NA	1	True	AATAAA	-19	NA	103151088	103153384	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_103151146_103152051_103152213_103152385_103152456_103152682
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046660	chr15	+	1678	8	NNC	ENSMUSG00000060992.10	novel	2438	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	382.981856020382	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGTGTGATGGCTC	NA	False	NA	29	True	AATAAA	-17	NA	103181326	103208292	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr15_+_103181369_103197527_103197597_103199101_103199184_103199755_103199848_103203148_103203205_103204959_103205038_103205160_103205227_103207099
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046672	chr15	-	117	1	ISM	ENSMUSG00000000552.11	ENSMUST00000229373.2	2348	8	20316	0	9499	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGACTCAGACTGTCT	NA	False	NA	-12	True	AATAAA	-24	NA	103222438	103222321	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr15_-_103222300_103222400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046676	chr15	-	625	8	NIC	ENSMUSG00000022487.15	novel	819	9	NA	NA	-14	7	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	42.4446818860521	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTTTTTTTTTTAAACT	8409	False	NA	8	True	AGTAAA	-26	NA	103338850	103310877	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr15_-_103310986_103313235_103313270_103318050_103318146_103328384_103328449_103328899_103328984_103329616_103329744_103336766_103336812_103338782
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046686	chr15	-	844	9	FSM	ENSMUSG00000022487.15	ENSMUST00000153930.8	799	9	-20	-25	10	0	multi-exon	FALSE	canonical	3	33	junction_8	29.634228520412	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCAAGTACTTTTTTTTT	8463	False	NA	1	True	AGTAAA	-19	NA	103338796	103310884	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr15_-_103310986_103313235_103313270_103318050_103318146_103328384_103328449_103328899_103328984_103329616_103329744_103333857_103333959_103336766_103336812_103338603
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046719	chr16	+	746	1	Intergenic	novelGene_146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCCACAAGTAGCCAAAAGA	7623	False	NA	35	True	AGTAAA	-35	NA	3549834	3550580	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr16_+_3549800_3550600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046727	chr16	-	181	1	ISM	ENSMUSG00000005983.16	ENSMUST00000115859.8	2592	3	2711	1495	1673	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTTGTTTGTTTGTCAT	NA	False	NA	NA	False	AGTAAA	-15	NA	3723842	3723661	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_-_3723700_3723800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046733	chr16	+	1623	12	FSM	ENSMUSG00000014232.15	ENSMUST00000040881.14	1779	12	158	-2	-56	2	multi-exon	FALSE	canonical	3	109	junction_6	16.217019933921	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTGCTATTATTATTT	3252	False	NA	9	True	AATACA	-19	NA	3726846	3759013	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_+_3727018_3729314_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755422_3755479_3758631
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046737	chr16	+	550	3	NNC	ENSMUSG00000014232.15	novel	515	3	NA	NA	-41	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	64	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTCTTTCGGAGTCCC	3267	False	NA	NA	False	AATAAA	-16	NA	3726861	3731438	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_3727018_3729314_3729419_3731148
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046757	chr16	-	177	1	Intergenic	novelGene_147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTGCGTGGTATTCCT	NA	False	NA	NA	False	ATTAAA	-17	NA	4102926	4102749	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr16_-_4102700_4102900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046796	chr16	+	2609	12	FSM	ENSMUSG00000004069.18	ENSMUST00000060067.12	2648	12	39	0	-5	0	multi-exon	FALSE	canonical	3	184	junction_10	248.960018695956	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	35	True	TTTAAA	-8	NA	4501972	4525559	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4523707_4523825_4524431
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046819	chr16	+	1088	5	NIC	ENSMUSG00000004070.16	novel	1730	6	NA	NA	22	0	combination_of_known_splicesites	TRUE	canonical	3	14	junction_4	161.425679493691	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCTAACAGCATTT	NA	False	NA	14	True	AATAAA	-15	NA	4544248	4584113	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_+_4544336_4580422_4580542_4581592_4581711_4582469_4582962_4583841
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046856	chr16	+	1152	4	FSM	ENSMUSG00000022516.11	ENSMUST00000229961.2	1162	4	-1	11	-1	2	multi-exon	FALSE	canonical	1	32	junction_3	242.27670131484	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTTCTGAGTGCCATG	94	False	NA	14	True	AATAAA	-20	NA	4756974	4758885	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_+_4757158_4757241_4757503_4758059_4758180_4758297
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046875	chr16	+	374	4	NIC	ENSMUSG00000096215.9	novel	382	4	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	19.6694913225759	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGTCTGGACTGTGTTCT	NA	False	NA	13	True	NA	NA	NA	4825149	4826175	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_+_4825190_4825607_4825753_4825835_4825919_4826069
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046893	chr16	+	420	4	FSM	ENSMUSG00000096215.9	ENSMUST00000184256.7	381	4	-36	-3	0	0	multi-exon	FALSE	canonical	1	6	junction_1	18.2086670449969	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGAGTCTGGACTGTGTT	NA	False	NA	11	True	NA	NA	NA	4825179	4826173	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_+_4825283_4825637_4825753_4825835_4825934_4826069
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046897	chr16	+	395	4	NIC	ENSMUSG00000096215.9	novel	399	4	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	21.0765799460496	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGAGTCTGGACTGTGTT	NA	False	NA	11	True	NA	NA	NA	4825189	4826173	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_+_4825283_4825637_4825753_4825835_4825919_4826069
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046931	chr16	-	3312	16	FSM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	-13	-7	-7	7	multi-exon	FALSE	canonical	3	744	junction_6	120.52477845747	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATCATTGTACCCAAAT	8103	False	NA	-1	True	AATAAA	-20	NA	4867734	4831765	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046969	chr16	-	1138	3	Intergenic	novelGene_148	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	7	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGGGGAGGTTTCGGAT	NA	False	NA	NA	False	ATTAAA	-22	NA	7769539	7765479	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr16_-_7766512_7768342_7768423_7769513
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000046980	chr16	+	546	2	ISM	ENSMUSG00000039345.17	ENSMUST00000046470.16	1825	11	-8	16394	-8	186	5prime_fragment	FALSE	canonical	3	183	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACCACTTACCATCCACC	NA	False	NA	NA	False	NA	NA	NA	8288643	8292154	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_+_8288730_8291694
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047021	chr16	-	2023	9	NNC	ENSMUSG00000022710.18	novel	4488	31	NA	NA	3108	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	322.798989310685	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATGACTGCTGTGGAAG	NA	False	NA	NA	False	AATAAA	-21	NA	8512337	8507463	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510877_8510983_8511565_8511644_8511733_8511843_8512276
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047027	chr16	+	200	1	Intergenic	novelGene_149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTTCAATTCCCAACCT	NA	False	NA	NA	False	NA	NA	NA	8550263	8550463	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr16_+_8550300_8550500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047030	chr16	-	664	3	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8906	-42761	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_1	15	83	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGAGTATCACTTTTG	NA	False	NA	NA	False	NA	NA	NA	8601266	8566584	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_8566919_8574679_8574937_8601193
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047040	chr16	+	227	1	Intergenic	novelGene_150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGCATGGGCTACTCTAC	NA	False	NA	NA	False	NA	NA	NA	8605621	8605848	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr16_+_8605600_8605800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047046	chr16	+	235	1	Intergenic	novelGene_151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCACATATCCCTAAGT	NA	False	NA	NA	False	AAAAAG	-34	NA	8678700	8678935	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr16_+_8678700_8678900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047053	chr16	+	1245	1	Antisense	novelGene_ENSMUSG00000116348.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTCTTGGCTCCATTA	NA	False	NA	NA	False	NA	NA	NA	8923437	8924682	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr16_+_8923400_8924700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047068	chr16	+	808	2	NNC	ENSMUSG00000116123.2	novel	664	2	NA	NA	-5991	38	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	55	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTTGTGTGCAGTCTGT	NA	False	NA	53	True	NA	NA	NA	8970642	8980236	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_8970862_8979647
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047100	chr16	+	180	2	Antisense	novelGene_ENSMUSG00000115943.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTCATGAGACCTAACC	NA	False	NA	NA	False	NA	NA	NA	9999198	10009123	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr16_+_9999299_10009043
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047104	chr16	+	893	8	ISM	ENSMUSG00000039200.17	ENSMUST00000119023.8	1048	9	42	1059	1	-1059	5prime_fragment	FALSE	canonical	3	57	junction_2	24.0797993075914	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTGTCCCTGAGTATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	10010811	10054093	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047105	chr16	+	1009	7	NNC	ENSMUSG00000039200.17	novel	1048	9	NA	NA	1	-230	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	44.8803966114383	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGTGTTTTGTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	10010811	10031865	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10031603
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047136	chr16	+	1228	11	NNC	ENSMUSG00000022503.11	novel	2121	11	NA	NA	-7	185	at_least_one_novel_splicesite	FALSE	canonical	2	61	junction_7	234.82267778049	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTAGGGCCTGCTTCCT	NA	False	NA	17	True	AATAAA	-19	NA	10229804	10241395	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239093_10239202_10239440_10239544_10240685_10240770_10241104
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047174	chr16	+	848	1	ISM	ENSMUSG00000037972.8	ENSMUST00000089011.6	2872	2	7808	0	7808	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACAGTCTTCACCTCTGG	NA	False	NA	17	True	AATAAA	-33	NA	10892001	10892849	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_+_10892000_10892800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047208	chr16	+	464	2	FSM	ENSMUSG00000097537.3	ENSMUST00000181526.3	2942	2	17	2461	17	-280	multi-exon	FALSE	canonical	1	6	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCTTCAATGCTCTAAAG	9716	False	NA	NA	False	AATAAA	-22	NA	11021246	11041199	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_+_11021612_11041100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047214	chr16	-	1611	10	ISM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	18805	341	2416	8	3prime_fragment	FALSE	canonical	3	1176	junction_9	175.378813985788	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTATTTGAATTGCTTTTG	NA	False	NA	-9	True	AATAAA	-21	NA	11053268	11038256	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047220	chr16	-	1724	1	Genic_Genomic	ENSMUSG00000065979.13	novel	NA	NA	NA	NA	103991	39	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTTTCTGAATGTTC	9905	False	NA	-1	True	NA	NA	NA	11623269	11621545	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr16_-_11621500_11623300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047267	chr16	+	606	1	ISM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	31149	0	11042	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTATAGAGAAATCTGAT	NA	False	NA	NA	False	AATAAA	-24	NA	13520870	13521476	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_+_13520900_13521500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047271	chr16	-	178	1	ISM	ENSMUSG00000022683.14	ENSMUST00000115807.9	964	4	15209	0	15209	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGTGTAAGAGGTAAAT	8151	False	NA	0	True	AATAAA	-20	NA	13533098	13532920	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_-_13532900_13533100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047274	chr16	-	796	3	NIC	ENSMUSG00000022683.14	novel	1423	4	NA	NA	-62	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	25	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGTGTAAGAGGTAAAT	NA	False	NA	0	True	AATAAA	-20	NA	13548369	13532920	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_-_13533461_13542972_13543080_13548220
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047331	chr16	-	285	1	ISM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	69273	422	3227	8	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTCTGAACATTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	13651718	13651433	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_-_13651400_13651700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047365	chr16	+	2268	9	NNC	ENSMUSG00000022678.17	novel	2287	9	NA	NA	-4	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	99.5386231570439	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTGCATTGTATATG	NA	False	NA	97	True	AATAAA	-19	NA	13981157	14010793	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008101_14009586
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047375	chr16	-	1486	5	FSM	ENSMUSG00000022677.16	ENSMUST00000023357.14	1465	5	-16	-5	14	5	multi-exon	FALSE	canonical	3	293	junction_3	56.7384349449295	500	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGGTCATGGTCTGTCTG	NA	False	NA	1	True	NA	NA	NA	14135255	14117102	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_-_14118074_14122317_14122452_14128910_14128996_14131679_14131878_14135157
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047411	chr16	-	3448	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	-6	765	-6	-765	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	2059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTTTTCTAGAATTTTT	NA	False	NA	0	True	AATAAA	-28	NA	15412394	15371305	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047431	chr16	-	1251	4	NNC	ENSMUSG00000022674.16	novel	4207	4	NA	NA	-8	-169	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	607.03047699436	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGTGCTATTTCTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	15412362	15373537	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_15374408_15394878_15395005_15398922_15399072_15412256
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047436	chr16	+	205	1	Intergenic	novelGene_152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTTTCATTCACAAATGA	NA	False	NA	NA	False	NA	NA	NA	15401552	15401757	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr16_+_15401600_15401800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047460	chr16	-	614	3	NNC	ENSMUSG00000022671.14	novel	1035	3	NA	NA	-218	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	304	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATGTGGAGTCCTGGT	NA	False	NA	-4	True	ATTAAA	-20	NA	15680804	15666306	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_15666582_15680261_15680408_15680611
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047462	chr16	-	638	3	NNC	ENSMUSG00000022671.14	novel	1035	3	NA	NA	-234	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	303	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATGTGGAGTCCTGGT	NA	False	NA	-4	True	ATTAAA	-20	NA	15680820	15666306	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_15666590_15680261_15680408_15680611
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047484	chr16	-	3234	20	FSM	ENSMUSG00000041974.11	ENSMUST00000040248.9	3282	20	48	0	1	0	multi-exon	FALSE	canonical	3	251	junction_3	29.6569490345649	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGGTTTTAGTGTT	1995	False	NA	0	True	AATAAA	-18	NA	15964667	15707087	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047517	chr16	+	1081	2	Genic_Genomic	ENSMUSG00000116598.2	novel	460	1	NA	NA	-148910	41	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTAAAAACAACTATATG	NA	False	NA	NA	False	AATAAA	-20	NA	16637562	16786973	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr16_+_16638028_16786357
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047518	chr16	+	1067	2	Genic_Genomic	ENSMUSG00000116598.2	novel	460	1	NA	NA	-148910	41	multi-exon	FALSE	canonical	0	0	junction_1	0	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTAAAAACAACTATATG	NA	False	NA	NA	False	AATAAA	-20	NA	16637562	16786973	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr16_+_16638028_16786371
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047519	chr16	+	1092	2	Genic_Genomic	ENSMUSG00000116598.2	novel	460	1	NA	NA	-148910	41	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTAAAAACAACTATATG	NA	False	NA	NA	False	AATAAA	-20	NA	16637562	16786973	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr16_+_16638028_16786346
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047520	chr16	+	1073	2	Genic_Genomic	ENSMUSG00000116598.2	novel	460	1	NA	NA	-148910	41	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTAAAAACAACTATATG	NA	False	NA	NA	False	AATAAA	-20	NA	16637562	16786973	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr16_+_16638028_16786365
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047529	chr16	+	1114	2	Genic_Genomic	ENSMUSG00000116598.2	novel	460	1	NA	NA	-148910	41	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTAAAAACAACTATATG	NA	False	NA	NA	False	AATAAA	-20	NA	16637562	16786973	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr16_+_16638061_16786357
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047531	chr16	+	1046	2	Genic_Genomic	ENSMUSG00000116598.2	novel	460	1	NA	NA	-148908	41	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTAAAAACAACTATATG	NA	False	NA	NA	False	AATAAA	-20	NA	16637564	16786973	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr16_+_16638028_16786390
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047539	chr16	-	763	2	FSM	ENSMUSG00000059305.13	ENSMUST00000232670.2	415	2	-29	-319	-29	2	multi-exon	FALSE	canonical	3	7	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTCTGGCTGGTTTGTG	NA	False	NA	1	True	ATTAAA	-16	NA	16688736	16686264	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_-_16686843_16688551
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047562	chr16	+	1084	1	ISM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	60816	2172	8606	532	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAGATTCAGTGTTGATT	9757	False	NA	36	True	AATAAA	-26	NA	16862061	16863145	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_+_16862100_16863100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047586	chr16	-	1300	8	FSM	ENSMUSG00000049916.13	ENSMUST00000093336.8	1266	8	-34	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	117.062516003464	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTATGTCCTCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	16943004	16931261	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16941375_16941519_16942853
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047596	chr16	-	1133	7	NNC	ENSMUSG00000049916.13	novel	1266	8	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	123.762429229912	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTATGTCCTCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	16943001	16931261	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_16931491_16935343_16935449_16935657_16935729_16936151_16936377_16938819_16938944_16939159_16939416_16942878
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047628	chr16	+	1327	5	FSM	ENSMUSG00000041774.17	ENSMUST00000069064.7	1297	5	-30	0	0	0	multi-exon	TRUE	canonical	3	70	junction_3	15.4171171105366	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTGGTTTATAAAGTG	NA	False	NA	12	True	AATAAA	-16	NA	16964812	16966710	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_+_16965011_16965096_16965257_16965461_16965562_16965660_16965839_16966019
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047639	chr16	-	730	1	ISM	ENSMUSG00000038965.18	ENSMUST00000232139.2	2906	5	49905	2	20611	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGGTGTATGGGTTTCT	NA	False	NA	-1	True	AATAAA	-18	NA	16970608	16969878	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_-_16969900_16970600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047640	chr16	-	1356	5	FSM	ENSMUSG00000038965.18	ENSMUST00000232668.2	1025	5	-28	-303	5	0	multi-exon	FALSE	canonical	3	4	junction_1	853.056856252853	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGGTGTATGGGTTTCT	NA	False	NA	-1	True	AATAAA	-18	NA	17019351	16969878	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_-_16970800_16972047_16972147_16977853_16978041_16994275_16994372_17019298
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047655	chr16	-	691	4	NNC	ENSMUSG00000038965.18	novel	2609	4	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	985.530426837357	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGCTTGCTTTGTTTTA	NA	False	NA	-19	True	ATTAAA	-17	NA	17019351	16971788	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_16972147_16977853_16978041_16994275_16994369_17019298
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047659	chr16	-	834	5	NNC	ENSMUSG00000038965.18	novel	2906	5	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	950.044209497642	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGCTTGCTTTGTTTTA	NA	False	NA	-19	True	ATTAAA	-17	NA	17019345	16971788	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_16972147_16977853_16978041_16991076_16991223_16994275_16994372_17019298
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047732	chr16	+	356	1	ISM	ENSMUSG00000006134.5	ENSMUST00000006293.5	5042	3	35091	1	34602	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCGGTGTTTCAGTGTCT	1663	False	NA	19	True	AATAAA	-26	NA	17304941	17305297	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_+_17304900_17305300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047741	chr16	-	1083	3	NIC	ENSMUSG00000022760.18	novel	1110	5	NA	NA	-1	0	intron_retention	FALSE	canonical	3	9	junction_2	46	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTTTGGCTTGGCTGG	7266	False	NA	1	True	AATAAA	-19	NA	17348920	17345941	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_-_17346605_17346798_17346940_17348641
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047774	chr16	+	128	1	Intergenic	novelGene_153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGTATGACAAAACTTAA	NA	False	NA	NA	False	NA	NA	NA	17542210	17542338	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr16_+_17542200_17542300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047808	chr16	-	1656	9	FSM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	10	0	0	0	multi-exon	FALSE	canonical	3	1593	junction_8	124.030175259894	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGTCCATCCCTTTG	NA	False	NA	-21	True	AATAAA	-16	NA	17746073	17743086	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745230_17745331_17745408_17745517_17745849
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047839	chr16	+	473	1	NIC	ENSMUSG00000003531.16	novel	1280	6	NA	NA	1391	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCTGTGCTACCTAG	NA	False	NA	10	True	AATAAA	-16	NA	17888734	17889207	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_+_17888700_17889200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047843	chr16	-	844	2	FSM	ENSMUSG00000003526.13	ENSMUST00000132241.2	687	2	-153	-4	-12	1	multi-exon	FALSE	canonical	3	130	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTTTCAATTTGCAAG	8060	False	NA	NA	False	NA	NA	NA	17907039	17902063	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_-_17902620_17906751
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047858	chr16	-	1091	6	NNC	ENSMUSG00000005732.15	novel	1085	6	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	4476.81143672592	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTGACAAGGCTATGTG	7131	False	NA	-1	True	AATAAA	-22	NA	18066598	18057647	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_18058058_18058757_18058824_18059608_18059738_18063060_18063223_18065152_18065290_18066411
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047871	chr16	-	1757	5	NIC	ENSMUSG00000005732.15	novel	1085	6	NA	NA	28	0	intron_retention	FALSE	canonical	3	10558	junction_3	1668.53848846828	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTGACAAGGCTATGTG	7161	False	NA	-1	True	AATAAA	-22	NA	18066568	18057647	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_-_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047893	chr16	-	1916	4	ISM	ENSMUSG00000022718.13	ENSMUST00000152033.2	1246	6	5705	-993	-2434	0	3prime_fragment	FALSE	canonical	3	194	junction_2	18.9795211273157	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTTTCTTTCTTCTG	NA	False	NA	0	True	CATAAA	-17	NA	18077428	18071811	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047908	chr16	+	553	1	ISM	ENSMUSG00000118669.2	ENSMUST00000239533.1	4698	19	58517	711	2317	109	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGTCTTCTGCCTTGG	6666	False	NA	12	True	ATTAAA	-15	NA	18224562	18225115	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_+_18224600_18225100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047933	chr16	+	102	1	ISM	ENSMUSG00000075704.18	ENSMUST00000206606.3	1809	17	52552	0	7118	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTCTGCGTGTGCTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	18297718	18297820	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_+_18297700_18297800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047962	chr16	+	815	2	ISM	ENSMUSG00000086965.2	ENSMUST00000146673.2	865	3	144	0	144	0	3prime_fragment	FALSE	canonical	3	20	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTGAGTACCATGCC	NA	False	NA	NA	False	AAAACA	-1	NA	18317794	18320408	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_+_18317891_18319689
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047974	chr16	-	1919	19	ISM	ENSMUSG00000000028.16	ENSMUST00000000028.14	2143	20	320	-2	-26	2	3prime_fragment	TRUE	canonical	3	368	junction_7	53.1151788307469	553	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTCTGTGATCTTATTGG	NA	False	NA	0	True	AATAAA	-23	NA	18630402	18599194	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000047980	chr16	-	1851	19	NNC	ENSMUSG00000000028.16	novel	2143	20	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	123.554219117472	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTCTGGGTCTGTGATC	NA	False	NA	-7	True	AATAAA	-16	NA	18630344	18599201	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617428_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048004	chr16	+	1371	2	FSM	ENSMUSG00000071632.11	ENSMUST00000190776.2	930	2	-81	-360	-4	0	multi-exon	FALSE	canonical	3	177	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTCTCAATTAGGGTT	NA	False	NA	17	True	ATTAAA	-17	NA	18655323	18658910	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_+_18655624_18657839
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048009	chr16	+	638	1	ISM	ENSMUSG00000071632.11	ENSMUST00000055413.13	1281	3	2945	0	2868	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTCTCAATTAGGGTT	NA	False	NA	17	True	ATTAAA	-17	NA	18658272	18658910	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_+_18658300_18658900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048038	chr16	-	448	1	NIC	ENSMUSG00000022706.17	novel	1280	4	NA	NA	3875	9	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTTTTGTTTTGTTTT	NA	False	NA	-15	True	AATAAA	-16	NA	18691414	18690966	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_-_18691000_18691400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048060	chr16	+	1884	1	ISM	ENSMUSG00000022686.15	ENSMUST00000164397.8	4872	6	10348	288	9528	2	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTAATGTGAATTTAAAA	NA	False	NA	9	True	AATAAA	-17	NA	19589331	19591215	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_+_19589300_19591200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048064	chr16	-	581	1	FSM	ENSMUSG00000084838.4	ENSMUST00000117664.2	286	1	-112	-183	-112	183	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGCTCTCTCTTTCTTTT	NA	False	NA	NA	False	CATAAA	-25	NA	19995874	19995293	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_-_19995300_19995900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048077	chr16	-	1353	10	NNC	ENSMUSG00000033918.17	novel	1348	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	558.240710946474	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTCGTTCCTTCAGAG	NA	False	NA	-16	True	AATAAA	-24	NA	20121138	20098569	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20112099_20112153_20116342_20116484_20116880_20117077_20120958
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048080	chr16	-	266	1	ISM	ENSMUSG00000033918.17	ENSMUST00000152887.3	1355	10	21728	2	3159	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTCGTTCCTTCAGAG	NA	False	NA	-16	True	AATAAA	-24	NA	20098835	20098569	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_-_20098600_20098800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048124	chr16	-	2186	7	ISM	ENSMUSG00000022822.17	ENSMUST00000079158.13	5811	30	64138	0	1750	0	3prime_fragment	FALSE	canonical	3	439	junction_6	35.3949933684915	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	-3	True	AATAAA	-20	NA	20181006	20150052	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048135	chr16	-	1045	7	NNC	ENSMUSG00000022822.17	novel	1136	7	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_2	90.516419627724	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGTATTTACTGCTG	NA	False	NA	-9	True	AATAAA	-17	NA	20245050	20219510	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_20219785_20221009_20221085_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048144	chr16	+	327	2	Intergenic	novelGene_154	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGACTTGGCTCCGTT	NA	False	NA	NA	False	NA	NA	NA	20266790	20270962	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr16_+_20266906_20270750
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048195	chr16	+	673	2	NIC	ENSMUSG00000115219.3	novel	1134	3	NA	NA	15	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGATCCCAGGTTTCTG	5922	False	NA	8	True	AATACA	-18	NA	20430365	20437607	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_+_20430571_20437139
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048203	chr16	+	2955	21	FSM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	17	-11	17	11	multi-exon	FALSE	canonical	3	2673	junction_8	225.447882003801	1585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTGGGTGTCATGGTC	NA	False	NA	34	True	AATAAA	-27	NA	20470418	20482175	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048214	chr16	+	690	4	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	2396	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1578.98793183763	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	False	NA	23	True	AATAAA	-16	NA	20480564	20482164	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_20480661_20480842_20480970_20481371_20481491_20481816
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048219	chr16	+	358	1	Genic_Genomic	ENSMUSG00000006998.17	novel	NA	NA	NA	NA	3640	2	mono-exon	FALSE	NA	NA	NA	NA	NA	342	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCTATTTCCTGGGT	NA	False	NA	25	True	AATAAA	-18	NA	20481808	20482166	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr16_+_20481800_20482200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048223	chr16	+	1857	11	ISM	ENSMUSG00000045983.17	ENSMUST00000132320.8	5004	26	7644	-2	1830	0	3prime_fragment	FALSE	canonical	3	1581	junction_2	98.883820719064	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	5771	False	NA	16	True	ATTAAA	-16	NA	20504669	20511633	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_+_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048257	chr16	+	434	2	Antisense	novelGene_ENSMUSG00000099764.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGGCAAATCTTAAAAGG	NA	False	NA	NA	False	NA	NA	NA	20640836	20641429	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr16_+_20640980_20641138
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048261	chr16	+	526	2	Antisense	novelGene_ENSMUSG00000099764.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGGCAAATCTTAAAAGG	NA	False	NA	NA	False	NA	NA	NA	20640837	20641429	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr16_+_20640948_20641013
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048267	chr16	-	469	2	Genic_Genomic	ENSMUSG00000099764.2	novel	496	1	NA	NA	-39	57	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGGTCATGGTGT	NA	False	NA	NA	False	AATAAA	-28	NA	20641429	20640837	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr16_-_20640985_20641107
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048271	chr16	+	467	2	Antisense	novelGene_ENSMUSG00000099764.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGGCAAATCTTAAAAGG	NA	False	NA	NA	False	NA	NA	NA	20640837	20641429	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr16_+_20641014_20641138
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048316	chr16	+	322	1	Intergenic	novelGene_155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCAGTCTTTGTCTGCG	NA	False	NA	NA	False	AATAAA	-24	NA	21152115	21152437	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr16_+_21152100_21152400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048319	chr16	-	1253	1	Genic_Genomic	ENSMUSG00000022853.8	novel	NA	NA	NA	NA	25271	3	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGTGTAAAAAACTGTTC	NA	False	NA	NA	False	AATAAA	-22	NA	21581286	21580033	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr16_-_21580000_21581300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048346	chr16	-	1206	4	FSM	ENSMUSG00000022856.10	ENSMUST00000232635.2	1184	4	-21	-1	0	0	multi-exon	FALSE	canonical	2	6	junction_3	70.6304938866115	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGCAGGTTCTGAATGT	9190	False	NA	-2	True	ATTAAA	-16	NA	21766302	21753075	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_-_21753796_21755730_21755870_21756682_21756845_21766117
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048354	chr16	-	1430	1	ISM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	39758	659	20560	-659	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGAAGGAGAAAGGGTTTA	5669	False	NA	-2	True	NA	NA	NA	21774655	21773225	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_-_21773200_21774700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048363	chr16	+	549	1	ISM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	39211	26	20136	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTGGTGACATCTCTT	NA	False	NA	9	True	AGTAAA	-16	NA	21867444	21867993	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_+_21867400_21868000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048366	chr16	-	2276	5	ISM	ENSMUSG00000033581.18	ENSMUST00000134188.8	3267	14	20898	-65	-4523	0	3prime_fragment	FALSE	canonical	3	902	junction_2	64.8478989636519	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTGTCTTGGTGTCTT	NA	False	NA	NA	False	AATATA	-16	NA	21886970	21877758	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048374	chr16	-	2139	9	NNC	ENSMUSG00000022858.17	novel	3403	9	NA	NA	-6	711	at_least_one_novel_splicesite	TRUE	canonical	3	309	junction_2	620.677741968407	461	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAATGAATGTTTCTCTT	NA	False	NA	3	True	ATTAAA	-32	NA	22084682	22064486	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_22065617_22065939_22066011_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048476	chr16	+	1161	6	NNC	ENSMUSG00000022871.14	novel	1572	8	NA	NA	9937	0	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_1	187.111731326499	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCAACCTGTTGAC	NA	False	NA	14	True	AATAAA	-20	NA	22750431	22758507	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_22750649_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048485	chr16	-	859	7	ISM	ENSMUSG00000060459.15	ENSMUST00000115349.9	1577	11	25027	0	-4082	0	3prime_fragment	FALSE	canonical	2	5	junction_4	2.74873708374511	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTCTCCTTTCAGCCA	NA	False	NA	NA	False	AATAAA	-21	NA	22822791	22804603	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_-_22804819_22806994_22807076_22815772_22815860_22815960_22816069_22818563_22818737_22819280_22819366_22822681
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048503	chr16	+	1903	11	NIC	ENSMUSG00000022884.17	novel	2208	11	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	3	441	junction_1	507.107927368524	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTCTGGCCATTTATTT	6051	False	NA	NA	False	AATAAA	-22	NA	22926505	22932701	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048521	chr16	+	1757	10	FSM	ENSMUSG00000022884.17	ENSMUST00000131871.8	1737	10	-20	0	0	0	multi-exon	FALSE	canonical	3	441	junction_1	631.938131836603	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048523	chr16	+	3167	10	NIC	ENSMUSG00000022884.17	novel	2208	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	441	junction_1	517.640158153648	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048525	chr16	+	1865	11	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_10	666.107979234598	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048526	chr16	+	2710	11	FSM	ENSMUSG00000022884.17	ENSMUST00000077605.12	2708	11	-1	-1	0	0	multi-exon	FALSE	canonical	3	675	junction_10	433.482883168413	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048527	chr16	+	1891	11	NNC	ENSMUSG00000022884.17	novel	2208	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	606.67507778052	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929878_22930014_22930252_22930343_22930566_22930647_22931916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048528	chr16	+	1864	11	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	179	junction_10	768.532133355529	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931208_22931916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048529	chr16	+	2003	12	FSM	ENSMUSG00000022884.17	ENSMUST00000123413.8	1965	12	-19	-19	0	2	multi-exon	FALSE	canonical	3	179	junction_11	605.093586095477	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGGTCTGGCCATTTAT	6053	False	NA	NA	False	AATAAA	-20	NA	22926507	22932699	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931208_22931916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048531	chr16	+	1804	10	NIC	ENSMUSG00000022884.17	novel	2208	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_8	607.784704409037	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930566_22930647_22931916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048534	chr16	+	2008	12	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_11	653.897178967119	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048536	chr16	+	1861	11	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	179	junction_10	702.387962596171	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931208_22931916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048537	chr16	+	1894	11	NNC	ENSMUSG00000022884.17	novel	2208	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	695.13483584122	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929878_22930014_22930252_22930343_22930566_22930647_22931916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048539	chr16	+	3027	9	ISM	ENSMUSG00000022884.17	ENSMUST00000131871.8	1737	10	-20	0	0	0	intron_retention	FALSE	canonical	3	441	junction_1	660.216063118734	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048540	chr16	+	1868	11	NNC	ENSMUSG00000022884.17	novel	1737	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_10	738.769551348727	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048542	chr16	+	2713	11	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	441	junction_1	579.353916013347	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048543	chr16	+	1664	9	NIC	ENSMUSG00000022884.17	novel	2208	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_7	718.379676337659	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930566_22930647_22931916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048544	chr16	+	2004	12	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	179	junction_11	686.556372698238	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931208_22931916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048546	chr16	+	1997	12	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	643.638109910317	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931204_22931916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048548	chr16	+	2573	10	NIC	ENSMUSG00000022884.17	novel	1737	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	441	junction_1	690.354516190552	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048552	chr16	+	3164	10	ISM	ENSMUSG00000022884.17	ENSMUST00000077605.12	2708	11	-1	-1	0	0	intron_retention	FALSE	canonical	3	1315	junction_4	273.717210111296	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048557	chr16	+	1857	11	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	737.350283108374	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931204_22931916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048558	chr16	+	1751	10	NNC	ENSMUSG00000022884.17	novel	2208	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	713.790161785471	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929878_22930014_22930252_22930343_22930566_22930647_22931916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048598	chr16	+	1887	10	NNC	ENSMUSG00000022884.17	novel	2208	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	619.725825478842	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_22926610_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048620	chr16	-	1225	11	NNC	ENSMUSG00000022881.16	novel	1228	11	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	486.513966911537	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATATACAATTTTATTTA	NA	False	NA	-26	True	AATAAA	-23	NA	22946490	22932692	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_22932858_22932936_22933054_22933194_22933266_22933352_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048630	chr16	-	1241	11	NNC	ENSMUSG00000022881.16	novel	1228	11	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	638.149825667923	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAATATACAATTTTATTT	NA	False	NA	-27	True	AATAAA	-22	NA	22946490	22932693	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_22932858_22932929_22933054_22933194_22933276_22933352_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048669	chr16	+	1723	1	FSM	ENSMUSG00000116875.2	ENSMUST00000231737.2	969	1	-81	-673	-81	673	mono-exon	FALSE	NA	NA	NA	NA	NA	4842	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACCAACTAGCTAATAAAC	NA	False	NA	NA	False	AATAAA	-41	NA	24348062	24349785	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_+_24348100_24349800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048736	chr16	-	2272	14	NNC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	136.800506937017	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATATTCTTATTGTCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	30406381	30380186	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386658_30387931_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048805	chr16	-	981	5	NIC	ENSMUSG00000022548.15	novel	979	5	NA	NA	124	3	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	60.946698023765	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTCCTGTGGATTC	8834	False	NA	-1	True	AATAAA	-15	NA	31133288	31115936	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_-_31116484_31119212_31119302_31122227_31122350_31129831_31129983_31133216
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048842	chr16	-	368	1	ISM	ENSMUSG00000022772.13	ENSMUST00000231360.2	6332	10	40414	2834	26304	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTGGATTTTTTTTTC	NA	False	NA	NA	False	CATAAA	-22	NA	31781691	31781323	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_-_31781300_31781700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048849	chr16	-	2238	1	ISM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	59242	1573	23900	-1573	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGAATTGAGATTCTT	NA	False	NA	2	True	ATTAAA	-26	NA	31838918	31836680	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_-_31836700_31838900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048865	chr16	-	754	5	NIC	ENSMUSG00000023791.19	novel	818	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	179.165251932399	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTTTGTCTTCATT	NA	False	NA	0	True	AATAAA	-30	NA	31918558	31903233	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31918472
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048912	chr16	-	1381	1	Intergenic	novelGene_156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGGATTGTAGAGTGG	NA	False	NA	NA	False	NA	NA	NA	31954857	31953476	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr16_-_31953500_31954900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048920	chr16	-	1134	1	ISM	ENSMUSG00000035764.6	ENSMUST00000042732.6	4179	3	15913	0	15913	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGTAGTCCATGTCA	2273	False	NA	2	True	ATTAAA	-17	NA	32050063	32048929	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_-_32048900_32050100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048930	chr16	+	1390	3	FSM	ENSMUSG00000022787.11	ENSMUST00000023474.4	1394	3	4	0	4	0	multi-exon	FALSE	canonical	3	19	junction_1	52	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTAATTTTGGTTTTTTTT	NA	False	NA	18	True	AATAAA	-19	NA	32066074	32075901	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_+_32066344_32070640_32071137_32075276
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000048934	chr16	+	341	1	NIC	ENSMUSG00000022787.11	novel	832	3	NA	NA	4419	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTTCGGCTGATGAC	NA	False	NA	NA	False	ATTAAA	-15	NA	32070637	32070978	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_+_32070600_32071000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049000	chr16	+	3469	9	FSM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	21	822	-5	-822	multi-exon	FALSE	canonical	3	485	junction_4	65.3632876697615	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGAGTTGTGGTTTTTTA	NA	False	NA	16	True	AATAAA	-39	NA	32698171	32728423	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049031	chr16	+	553	5	FSM	ENSMUSG00000060636.15	ENSMUST00000115079.8	510	5	-30	-13	-17	0	multi-exon	FALSE	canonical	3	3184	junction_1	2675.04705566089	8387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTTCTCTTTGTTAAG	NA	False	NA	34	True	AATAAA	-45	NA	32876805	32880559	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_+_32876926_32877505_32877549_32877759_32877913_32879048_32879194_32880467
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049061	chr16	+	456	5	NNC	ENSMUSG00000060636.15	novel	491	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3999.03397709997	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTTCTCTTTGTTAAG	NA	False	NA	34	True	AATAAA	-45	NA	32876851	32880559	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_32876875_32877505_32877549_32877759_32877913_32879048_32879194_32880467
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049063	chr16	+	1631	3	FSM	ENSMUSG00000060636.15	ENSMUST00000133785.2	2858	3	0	1227	0	-1207	multi-exon	FALSE	canonical	3	3858	junction_1	3305	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACTGGCAGGGTGAAGC	NA	False	NA	NA	False	TATAAA	-41	NA	32876851	32879318	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_+_32876881_32877505_32877549_32877759
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049071	chr16	+	1574	4	NIC	ENSMUSG00000060636.15	novel	491	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	3858	junction_1	2733.82580929282	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCACATCTGTCC	NA	False	NA	10	True	AATAAA	-25	NA	32876851	32880535	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_+_32876881_32877505_32877549_32877759_32879194_32880467
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049086	chr16	+	1074	4	FSM	ENSMUSG00000060636.15	ENSMUST00000115075.2	518	4	-536	-20	0	0	multi-exon	FALSE	canonical	3	8092	junction_3	1051.6733755729	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTCCTAAATTGAGTT	NA	False	NA	21	True	AATAAA	-36	NA	32876851	32880546	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_+_32877549_32877759_32877913_32879048_32879194_32880467
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049103	chr16	+	517	5	NNC	ENSMUSG00000060636.15	novel	500	5	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4559.66925198528	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCACATCTGTCC	NA	False	NA	10	True	AATAAA	-25	NA	32876874	32880535	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_32876988_32877505_32877549_32877759_32877913_32879048_32879189_32880467
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049114	chr16	+	483	4	NNC	ENSMUSG00000060636.15	novel	500	5	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4529.46217067276	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCACATCTGTCC	NA	False	NA	10	True	AATAAA	-25	NA	32877428	32880535	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_32877549_32877759_32877913_32879048_32879191_32880467
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049118	chr16	+	126	2	Intergenic	novelGene_157	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTGTTCTTGGGACCCA	NA	False	NA	NA	False	NA	NA	NA	32971458	32972737	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr16_+_32971561_32972713
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049131	chr16	+	369	1	ISM	ENSMUSG00000022808.6	ENSMUST00000231389.2	2457	13	47750	3	31436	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATTTGTATTATTTTAA	NA	False	NA	23	True	AATAAA	-23	NA	33119563	33119932	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_+_33119600_33119900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049154	chr16	-	2157	1	NIC	ENSMUSG00000022814.7	novel	3484	6	NA	NA	10065	0	mono-exon	FALSE	NA	NA	NA	NA	NA	457	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGTCTCCTGCCTCT	9863	False	NA	NA	False	NA	NA	NA	33777308	33775151	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_-_33775200_33777300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049171	chr16	-	1024	5	NNC	ENSMUSG00000022814.7	novel	3283	5	NA	NA	0	-1803	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	502.554661206122	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGACTGGTATTTGTT	8675	False	NA	NA	False	NA	NA	NA	33787373	33776966	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782260_33787300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049176	chr16	-	1518	5	NIC	ENSMUSG00000022814.7	novel	3484	6	NA	NA	0	-1804	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	532.568305478274	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCAAGACTGGTATTTGT	8675	False	NA	NA	False	NA	NA	NA	33787373	33776967	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_-_33777306_33780546_33780723_33781938_33782611_33784141_33784296_33787195
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049190	chr16	+	1026	6	NNC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	-10	-2580	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	574.173980601699	396	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTGGTCCTTTCAGCAT	NA	False	NA	89	True	CATAAA	-6	NA	34842787	34926967	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_34843006_34846194_34846330_34895975_34896065_34920125_34920248_34922315_34922495_34926684
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049193	chr16	+	1006	6	NIC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	-7	-2580	combination_of_known_splicesites	FALSE	canonical	3	32	junction_2	561.414428029776	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTGGTCCTTTCAGCAT	NA	False	NA	89	True	CATAAA	-6	NA	34842790	34926967	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_+_34843006_34846194_34846313_34895975_34896065_34920125_34920248_34922315_34922495_34926684
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049222	chr16	+	2070	1	ISM	ENSMUSG00000035376.11	ENSMUST00000061156.10	3598	7	84676	4	58489	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGTCTGATCTGGAGCC	1282	False	NA	NA	False	AATAAA	-16	NA	34927473	34929543	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_+_34927500_34929500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049241	chr16	-	338	1	FSM	ENSMUSG00000052192.6	ENSMUST00000143451.2	236	1	-48	-54	-48	54	mono-exon	FALSE	NA	NA	NA	NA	NA	522	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGGGGGGGAATCACACA	NA	False	NA	-1	True	AATAAA	-19	NA	35393974	35393636	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_-_35393600_35394000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049253	chr16	+	1598	8	NNC	ENSMUSG00000022849.6	novel	1703	8	NA	NA	14	-94	at_least_one_novel_splicesite	TRUE	canonical	3	16	junction_3	208.007162357061	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACGTGTATATTTGCTTT	5418	False	NA	13	True	AATATA	-19	NA	35590758	35645824	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_35590910_35607559_35607746_35621906_35622089_35634284_35634425_35637521_35637694_35639048_35639133_35645058_35645170_35645252
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049257	chr16	+	1664	9	NNC	ENSMUSG00000022849.6	novel	4680	9	NA	NA	14	-94	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_4	249.638457323787	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACGTGTATATTTGCTTT	5418	False	NA	13	True	AATATA	-19	NA	35590758	35645824	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634414_35634699_35634780_35637521_35637694_35639048_35639133_35645058_35645170_35645252
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049267	chr16	+	532	1	NIC	ENSMUSG00000022849.6	novel	1703	8	NA	NA	-1	-35492	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGTCCTGTATCCTAT	5435	False	NA	NA	False	TTTAAA	-21	NA	35590775	35591307	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_+_35590800_35591300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049276	chr16	+	1089	5	ISM	ENSMUSG00000022849.6	ENSMUST00000231579.2	1703	8	43530	94	43498	-94	3prime_fragment	FALSE	canonical	3	565	junction_1	26.042033330752	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACGTGTATATTTGCTTT	NA	False	NA	13	True	AATATA	-19	NA	35634274	35645824	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_+_35634425_35637521_35637694_35639048_35639133_35645058_35645170_35645252
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049304	chr16	-	576	4	NIC	ENSMUSG00000003955.9	novel	718	5	NA	NA	30	3	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	492.628550622971	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTTTGTTTTGTTGCT	NA	False	NA	-2	True	AATACA	-17	NA	35891934	35864212	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_-_35864462_35870211_35870321_35872655_35872779_35891839
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049308	chr16	-	251	1	NIC	ENSMUSG00000003955.9	novel	718	5	NA	NA	8301	3	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTTTGTTTTGTTGCT	8128	False	NA	-2	True	AATACA	-17	NA	35864463	35864212	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_-_35864200_35864500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049317	chr16	+	180	1	Intergenic	novelGene_158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGCTGGTGAGATGGCT	4517	False	NA	NA	False	NA	NA	NA	35876140	35876320	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr16_+_35876100_35876300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049355	chr16	+	659	5	NNC	ENSMUSG00000075229.12	novel	1073	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	381.587064115124	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGTACATATTTATTT	NA	False	NA	16	True	ATTAAA	-13	NA	35892449	35912481	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_35892508_35903060_35903177_35905386_35905534_35910270_35910331_35912203
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049375	chr16	-	477	2	Intergenic	novelGene_159	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGAGTTTTCTTCAATTCT	8547	False	NA	NA	False	TATAAA	-16	NA	35918406	35917007	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr16_-_35917103_35918024
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049381	chr16	+	2781	7	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	14239	57	-7321	0	3prime_fragment	FALSE	canonical	3	275	junction_4	15.8683822601914	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTTTGGCAGAGGT	NA	False	NA	12	True	ATTAAA	-24	NA	36528578	36547109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049423	chr16	+	1094	5	ISM	ENSMUSG00000034206.16	ENSMUST00000183112.8	7386	26	-20	77401	-20	1	5prime_fragment	FALSE	canonical	3	18	junction_3	8.6421930087218	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATTTATTTGTTTA	3728	False	NA	NA	False	ATTAAA	-17	NA	36832127	36837953	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_+_36832422_36833468_36833649_36835440_36835572_36836674_36836771_36837560
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049427	chr16	+	962	6	NNC	ENSMUSG00000034206.16	novel	7386	26	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	12.2474487139159	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATTTATTTGTTTA	3742	False	NA	NA	False	ATTAAA	-17	NA	36832141	36837953	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_36832422_36833468_36833649_36835440_36835572_36836674_36836771_36837560_36837718_36837835
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049461	chr16	-	403	3	NNC	ENSMUSG00000022820.5	novel	971	3	NA	NA	-30	1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	3021	29	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTCTTTTTCTTGGATT	NA	False	NA	-1	True	AATAAA	-24	NA	37474758	37467961	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_37468082_37469375_37469523_37474622
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049495	chr16	+	1204	11	FSM	ENSMUSG00000022816.12	ENSMUST00000114763.3	3789	11	185	2400	3	-312	multi-exon	FALSE	canonical	3	116	junction_9	10.1607086367044	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTAGGAATGCTTTAAGA	5336	False	NA	NA	False	NA	NA	NA	37597419	37654476	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_+_37597515_37597655_37597713_37636067_37636173_37639265_37639396_37641517_37641551_37642962_37643094_37647087_37647207_37649068_37649182_37649475_37649587_37651918_37651996_37654243
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049510	chr16	+	448	4	NNC	ENSMUSG00000046516.11	novel	444	3	NA	NA	-2258	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1625.0682720701	7152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTGTTTCTTTTTCT	NA	False	NA	31	True	ATTAAA	-33	NA	38165094	38173128	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_38165138_38167394_38167570_38169602_38169692_38172987
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049526	chr16	+	438	3	NNC	ENSMUSG00000046516.11	novel	444	3	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1450.5	133	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTGTGTTTCTTTTTC	NA	False	NA	30	True	ATTAAA	-32	NA	38167350	38173127	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_38167560_38169602_38169692_38172987
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049528	chr16	+	446	3	NNC	ENSMUSG00000046516.11	novel	444	3	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1905.5	454	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTGTTTCTTTTTCT	NA	False	NA	31	True	ATTAAA	-33	NA	38167350	38173128	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_38167570_38169602_38169689_38172987
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049592	chr16	-	882	5	NNC	ENSMUSG00000002847.8	novel	1974	11	NA	NA	10108	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	79.8197187416744	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTGGTTGTTTTGTTG	NA	False	NA	-3	True	AATAAA	-20	NA	38228048	38216478	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_38216898_38217700_38217866_38221237_38221347_38225894_38225989_38227953
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049613	chr16	-	1173	3	NNC	ENSMUSG00000002844.10	novel	2966	4	NA	NA	3533	-1371	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	664	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTGACTTTTCCTTGA	NA	False	NA	NA	False	NA	NA	NA	38269511	38265762	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_38266467_38267609_38267971_38269403
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049660	chr16	-	2925	11	FSM	ENSMUSG00000034064.15	ENSMUST00000153187.8	2922	11	0	-3	0	0	multi-exon	FALSE	canonical	3	209	junction_10	237.918389369128	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGGCTCCTCATTTACT	6266	False	NA	-1	True	NA	NA	NA	38370584	38345498	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049675	chr16	+	2464	9	NNC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	-46	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	290.386703380165	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCTATTTGTGAGCATT	7024	False	NA	5	True	AATAAA	-16	NA	38379013	38412525	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405741_38405881_38406582_38406771_38408544_38408670_38411273
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049703	chr16	+	481	1	ISM	ENSMUSG00000002845.15	ENSMUST00000171687.8	2667	9	28100	770	2873	46	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAGTGACATTCACTTA	7302	False	NA	31	True	AGTAAA	-22	NA	38411273	38411754	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_+_38411300_38411800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049757	chr16	-	1307	6	FSM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	0	2108	0	266	multi-exon	FALSE	canonical	3	89	junction_4	12.4739729036101	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCTTCTAGTATTTAAT	NA	False	NA	NA	False	AATAGA	-25	NA	44566726	44559238	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566361
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049822	chr16	-	2068	1	FSM	ENSMUSG00000048087.7	ENSMUST00000059524.7	2093	1	0	25	0	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTCTACTGCCTAAAAAAA	NA	False	NA	NA	False	GATAAA	-6	NA	45975440	45973372	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_-_45973400_45975400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049829	chr16	+	1349	6	FSM	ENSMUSG00000058550.16	ENSMUST00000050705.4	1271	6	-66	-12	-12	12	multi-exon	FALSE	canonical	2	17	junction_3	211.400094607358	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGTTATCTGAATGG	NA	False	NA	35	True	ACTAAA	-17	NA	48104083	48114612	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_+_48104205_48108240_48108359_48109401_48109464_48111376_48111678_48113273_48113470_48114061
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049858	chr16	+	272	1	Genic_Genomic	ENSMUSG00000072419.6	novel	NA	NA	NA	NA	-38	-15582	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGCTTAGACTGCCAGC	NA	False	NA	NA	False	NA	NA	NA	48124232	48124504	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr16_+_48124200_48124500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049867	chr16	+	455	1	ISM	ENSMUSG00000072419.6	ENSMUST00000232448.2	2447	8	15197	164	8628	-164	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTCTTGAGTATTT	NA	False	NA	64	True	NA	NA	NA	48139467	48139922	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_+_48139500_48139900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049910	chr16	+	1008	8	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17175	13	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	410.646429177119	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTGATTGCTATTG	870	False	NA	24	True	AATAAA	-29	NA	48432204	48451276	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_48432377_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049945	chr16	+	1304	11	FSM	ENSMUSG00000055447.20	ENSMUST00000229206.2	1316	11	16	-4	5	4	multi-exon	FALSE	canonical	3	21	junction_9	24.8766959220874	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAATCCCATTTTTCTAT	NA	False	NA	23	True	AATAAA	-27	NA	49676023	49731448	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49728416_49728442_49729065_49729099_49731231
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000049957	chr16	-	509	3	Intergenic	novelGene_160	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	1.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTGTGGGAGGCTCTC	2978	False	NA	NA	False	AATAAA	-34	NA	49853385	49840005	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr16_-_49840357_49847553_49847601_49853274
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050008	chr16	+	1024	5	NIC	ENSMUSG00000098274.8	novel	677	6	NA	NA	-28	0	intron_retention	FALSE	canonical	3	9815	junction_1	1605.94940767136	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGCTGATTGATTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	55786755	55791798	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_+_55786802_55786909_55786986_55787422_55787534_55789872_55790539_55791673
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050020	chr16	+	636	5	NNC	ENSMUSG00000098274.8	novel	639	5	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_2	5878.01047868239	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGCTGATTGATTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	55786790	55791798	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_55786986_55787422_55787538_55789872_55790010_55790474_55790539_55791673
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050023	chr16	+	587	5	NNC	ENSMUSG00000098274.8	novel	639	5	NA	NA	70	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	5630.79014770574	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGCTGATTGATTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	55786979	55791798	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_55787130_55787422_55787534_55789872_55790010_55790474_55790539_55791673
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050031	chr16	+	2167	2	ISM	ENSMUSG00000022601.12	ENSMUST00000184618.2	3159	3	1098	0	1098	0	3prime_fragment	FALSE	canonical	3	150	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGCGTTGAGCTTGAC	6253	False	NA	6	True	AATAAA	-27	NA	55826652	55829276	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_+_55826714_55827170
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050034	chr16	-	1683	1	ISM	ENSMUSG00000071533.12	ENSMUST00000125040.8	2200	5	12508	0	7440	0	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCTTATTTTCTTTC	1322	False	NA	NA	False	AATAAA	-16	NA	55837551	55835868	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_-_55835900_55837600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050045	chr16	-	2454	5	FSM	ENSMUSG00000071533.12	ENSMUST00000130818.8	938	5	-24	-1492	-4	-1	multi-exon	FALSE	canonical	3	279	junction_4	876.141113063415	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	55850063	55835869	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55845001_55849965
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050058	chr16	-	842	4	ISM	ENSMUSG00000071533.12	ENSMUST00000130818.8	938	5	-30	1280	0	-159	5prime_fragment	FALSE	canonical	3	279	junction_3	1010.902676929	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACGTGCACATTTTTTTT	NA	False	NA	NA	False	AATAAA	-33	NA	55850069	55838641	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_-_55838891_55842417_55842493_55844586_55845001_55849965
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050092	chr16	-	1922	2	Antisense	novelGene_ENSMUSG00000052917.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	133	junction_1	0	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCATATAATGTTTATAG	4043	False	NA	NA	False	AATAAA	-25	NA	55936690	55932439	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr16_-_55934262_55936590
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050101	chr16	-	656	2	Antisense	novelGene_ENSMUSG00000052917.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTAGAGCTGGGAGGTGG	4059	False	NA	-6	True	NA	NA	NA	55936674	55933918	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr16_-_55934491_55936590
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050154	chr16	-	970	9	NNC	ENSMUSG00000022748.9	novel	1150	10	NA	NA	283230	1	at_least_one_novel_splicesite	TRUE	canonical	3	4	junction_7	78.8811408069128	33	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGTTTCTCTTTCCCCTC	NA	False	NA	-8	True	AATAAA	-33	NA	57143909	57122361	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_57122646_57124042_57124132_57127188_57127277_57127731_57127793_57131615_57131719_57133020_57133081_57136524_57136652_57138268_57138344_57143826
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050206	chr16	+	2656	1	FSM	ENSMUSG00000092029.2	ENSMUST00000165914.2	661	1	-172	-1823	-172	1823	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAGACCTTATATAAGCT	NA	False	NA	NA	False	AATAAA	-34	NA	61197446	61200102	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_+_61197400_61200100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050212	chr16	-	1102	7	ISM	ENSMUSG00000022911.12	ENSMUST00000089289.6	3528	10	25	10343	-22	7822	5prime_fragment	FALSE	canonical	3	43	junction_1	7.97217382873427	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCGTGGAGAAGGACAGTG	NA	False	NA	NA	False	AAAAAG	-14	NA	62667378	62624390	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_-_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62647526_62647777_62651105_62651177_62667047
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050231	chr16	-	1051	1	ISM	ENSMUSG00000047141.6	ENSMUST00000207826.2	6261	9	69155	1100	3824	-1096	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATTTGCACAATGAATT	NA	False	NA	NA	False	AATAAA	-19	NA	64602860	64601809	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_-_64601800_64602900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050240	chr16	+	1273	1	ISM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	6229	10	5523	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGAAATCATATTTTG	NA	False	NA	11	True	AATAAA	-20	NA	64678587	64679860	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_+_64678600_64679900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050259	chr16	+	376	1	Intergenic	novelGene_161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTTTTAACTCAAGG	NA	False	NA	NA	False	ATTAAA	-18	NA	74409878	74410254	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr16_+_74409900_74410300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050281	chr16	-	500	1	FSM	ENSMUSG00000050299.9	ENSMUST00000052867.9	402	1	-63	-35	-63	35	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTGTCCAGAAAAAAAAAAA	NA	False	NA	-26	True	AATAAA	-6	NA	76200603	76200103	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_-_76200100_76200600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050322	chr16	-	1078	10	NNC	ENSMUSG00000022889.8	novel	2294	10	NA	NA	-4	-705	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	323.588597213983	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTGTCCCTGCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	84532122	84515168	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_84515273_84517157_84517206_84520725_84520880_84522012_84522079_84524371_84524482_84527306_84527375_84527715_84527816_84529229_84529370_84531294_84531502_84532041
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050323	chr16	-	1075	10	NNC	ENSMUSG00000022889.8	novel	2294	10	NA	NA	-4	-705	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	318.546699873033	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTGTCCCTGCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	84532122	84515168	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_84515273_84517157_84517200_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84527816_84529229_84529370_84531294_84531502_84532041
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050326	chr16	-	1085	10	NNC	ENSMUSG00000022889.8	novel	2294	10	NA	NA	-4	-705	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	324.424656930837	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTGTCCCTGCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	84532122	84515168	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_84515273_84517157_84517206_84520725_84520880_84522012_84522079_84524367_84524485_84527306_84527375_84527715_84527816_84529229_84529370_84531294_84531502_84532041
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050327	chr16	-	1079	10	NNC	ENSMUSG00000022889.8	novel	2294	10	NA	NA	-4	-705	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	318.546699873033	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTGTCCCTGCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	84532122	84515168	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_84515273_84517157_84517200_84520721_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84527816_84529229_84529370_84531294_84531502_84532041
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050336	chr16	-	1224	10	NNC	ENSMUSG00000022889.8	novel	2294	10	NA	NA	-4	-705	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	318.128827076837	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTGTCCCTGCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	84532122	84515168	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_84515273_84517157_84517206_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84527816_84529229_84529370_84531151_84531502_84532041
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050353	chr16	-	185	1	NIC	ENSMUSG00000022889.8	novel	2294	10	NA	NA	16765	-705	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTGTCCCTGCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	84515353	84515168	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_-_84515200_84515400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050369	chr16	+	1618	9	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-33	129	combination_of_known_splicesites	TRUE	canonical	3	40	junction_7	1349.13685369572	319	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCTTATGTGTTCAGG	NA	False	NA	33	True	AATATA	-24	NA	84570977	84620047	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84618147_84618191_84619674
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050438	chr16	-	481	4	NNC	ENSMUSG00000022890.14	novel	809	5	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	2752.08434140784	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84631745	84624758	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_84624884_84625312_84625438_84628208_84628391_84631696
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050454	chr16	-	551	4	NIC	ENSMUSG00000022890.14	novel	809	5	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	179	junction_3	3104.137990919	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84631901	84624758	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_-_84624884_84625312_84625438_84628216_84628396_84631779
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050533	chr16	-	1000	5	ISM	ENSMUSG00000052299.10	ENSMUST00000039449.9	7743	30	49924	2015	49875	-2015	3prime_fragment	FALSE	canonical	3	176	junction_4	15.6584641647896	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTAAATTATAGAACTGAA	NA	False	NA	0	True	AATAAA	-21	NA	87179576	87175553	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050538	chr16	-	2032	5	FSM	ENSMUSG00000041079.13	ENSMUST00000039101.12	2009	5	-21	-2	-21	2	multi-exon	FALSE	canonical	3	39	junction_1	7.71362431027076	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTGTTATCAGTAGTC	NA	False	NA	-2	True	AATAAA	-19	NA	87237482	87230292	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_-_87231515_87233460_87233824_87233951_87234020_87234181_87234403_87237324
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050555	chr16	-	2452	15	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	-53	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	1309.6116888262	5771	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGGTGAACATAATTTATA	NA	False	NA	-12	True	AATAAA	-29	NA	87292814	87280212	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288185_87288340_87290594_87290675_87291224_87291316_87292616
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050572	chr16	-	1824	15	NNC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	-2	113	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	1309.6116888262	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTGTTTAATCACT	NA	False	NA	-24	True	AATAAA	-14	NA	87292749	87280762	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288198_87288340_87290594_87290675_87291224_87291316_87292616
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050622	chr16	+	159	1	Genic_Genomic	ENSMUSG00000022982.11	novel	NA	NA	NA	NA	5421	4	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGACTCCTTTGACTG	NA	False	NA	23	True	ATTAAA	-22	NA	90023062	90023221	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr16_+_90023100_90023200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050633	chr16	+	511	1	Genic_Genomic	ENSMUSG00000053414.9	novel	NA	NA	NA	NA	37150	4	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTTTGTTTATTGATG	NA	False	NA	13	True	AATACA	-19	NA	90295934	90296445	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr16_+_90295900_90296400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050678	chr16	+	179	1	Intergenic	novelGene_162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTGAGAGAGGGCCCTG	NA	False	NA	31	True	NA	NA	NA	91168937	91169116	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr16_+_91168900_91169100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050681	chr16	+	1161	7	FSM	ENSMUSG00000022971.19	ENSMUST00000117836.8	1099	7	-56	-6	11	6	multi-exon	FALSE	canonical	3	47	junction_6	3.19722101554181	477	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTCTCTAATGTCTTG	NA	False	NA	14	True	AATAAA	-26	NA	91169681	91190934	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_+_91169963_91180748_91180842_91181870_91181913_91182829_91182954_91184831_91185005_91188608_91188767_91190644
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050693	chr16	-	361	2	Antisense	novelGene_ENSMUSG00000022967.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCACGTGCATTTCACAC	NA	False	NA	NA	False	AATAAA	-34	NA	91293267	91291940	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr16_-_91292210_91293175
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050698	chr16	-	2274	7	FSM	ENSMUSG00000022964.15	ENSMUST00000023686.15	2347	7	74	-1	-62	1	multi-exon	FALSE	canonical	3	77	junction_3	6.43989302878722	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGAATCTGAGTCTTTTT	NA	False	NA	-5	True	AATAAA	-25	NA	91394614	91371389	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_-_91373047_91374861_91374920_91377089_91377183_91378582_91378651_91380163_91380277_91383829_91383970_91394469
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050705	chr16	-	309	1	ISM	ENSMUSG00000022962.16	ENSMUST00000023684.14	3518	22	25249	209	224	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	6545	False	NA	NA	False	AATAAA	-21	NA	91418591	91418282	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_-_91418300_91418600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050706	chr16	-	3299	22	FSM	ENSMUSG00000022962.16	ENSMUST00000232289.2	3276	22	-14	-9	7	-2	multi-exon	FALSE	canonical	3	460	junction_21	338.409230453656	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443833	91418282	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440032_91443771
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050780	chr16	-	976	6	FSM	ENSMUSG00000058240.15	ENSMUST00000141664.9	762	6	-173	-41	29	41	multi-exon	FALSE	canonical	3	1466	junction_2	55.2268050859363	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTTTATTTTTCATGA	9030	False	NA	NA	False	AATAGA	-13	NA	91525661	91503689	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_-_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050784	chr16	-	615	6	NNC	ENSMUSG00000058240.15	novel	600	3	NA	NA	4	-1525	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	627.315741871667	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTATTCTTTTCTTTTT	9184	False	NA	NA	False	AATGAA	-18	NA	91525507	91505255	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_91505541_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050792	chr16	-	526	3	FSM	ENSMUSG00000058240.15	ENSMUST00000123751.2	512	3	-9	-5	6	5	multi-exon	FALSE	canonical	2	4	junction_1	797.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGATTTTTCTTTCTC	9186	False	NA	NA	False	AATAAA	-26	NA	91525505	91511900	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_-_91512295_91514291_91514364_91525445
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050807	chr16	-	680	6	ISM	ENSMUSG00000022956.12	ENSMUST00000139277.8	710	7	860	-99	860	0	3prime_fragment	FALSE	canonical	3	5679	junction_2	340.84741454205	481	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAGGAGCCTTGTCCTTT	2084	False	NA	-1	True	AATAAA	-20	NA	91727302	91722101	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_-_91722280_91722428_91722516_91723346_91723460_91723740_91723871_91725786_91725898_91727241
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050820	chr16	-	725	7	NNC	ENSMUSG00000022956.12	novel	838	7	NA	NA	-33	2	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	2369.19426645901	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGTGAGGAGCCTTGTCC	914	False	NA	-4	True	AATAAA	-17	NA	91728472	91722104	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_91722280_91722428_91722509_91723346_91723460_91723740_91723871_91725786_91725898_91727241_91727293_91728407
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050901	chr16	-	2192	4	FSM	ENSMUSG00000022951.17	ENSMUST00000023672.10	2190	4	0	-2	0	0	multi-exon	FALSE	canonical	3	20	junction_3	123.764112551077	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGTTGGTCGTTTTCT	NA	False	NA	-3	True	AATAAA	-24	NA	92196965	92188840	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr16_-_92190517_92192753_92192914_92194150_92194325_92196783
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050918	chr16	-	1754	11	NIC	ENSMUSG00000022948.17	novel	1826	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_10	28.7090578041147	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAGACTGTCTTAGTCG	NA	False	NA	-1	True	AATAAA	-21	NA	93400703	93380344	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400453
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050975	chr16	+	1926	14	NNC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	250.760948423868	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTGACTTCGCT	4366	False	NA	21	True	AATAAA	-29	NA	93680788	93703003	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688489_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000050993	chr16	+	757	3	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-569	1916	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	104	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTCCGCGTGATTCA	2295	False	NA	17	True	NA	NA	NA	93811730	93815011	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_+_93811971_93812291_93812370_93814572
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051068	chr16	+	409	1	Intergenic	novelGene_163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTGTAAAGTGGTTTC	NA	False	NA	NA	False	AATATA	-22	NA	94327838	94328247	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr16_+_94327800_94328200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051085	chr16	+	337	3	Antisense	novelGene_ENSMUSG00000043301.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	5.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTGCATCACACAGT	NA	False	NA	NA	False	AATAAA	-15	NA	94656116	94668288	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr16_+_94656240_94667462_94667539_94668150
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051118	chr16	-	1004	7	NNC	ENSMUSG00000022913.17	novel	1044	7	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	467.58614773703	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAACTTTATTTTCTTAA	NA	False	NA	-10	True	AATAAA	-16	NA	95792116	95781132	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_95781312_95783301_95783439_95784992_95785192_95788492_95788556_95789155_95789312_95790691_95790799_95791953
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051122	chr16	-	1001	7	NNC	ENSMUSG00000022913.17	novel	1044	7	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	463.678678253235	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAACTTTATTTTCTTAA	NA	False	NA	-10	True	AATAAA	-16	NA	95792112	95781132	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_95781312_95783296_95783439_95784992_95785192_95788492_95788556_95789159_95789312_95790691_95790799_95791953
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051138	chr16	-	636	1	ISM	ENSMUSG00000022914.18	ENSMUST00000113827.4	2382	5	15223	0	-6204	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAAGTATTCTATAAAATC	1042	False	NA	45	True	AATAAA	-17	NA	95868503	95867867	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr16_-_95867900_95868500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051163	chr16	-	1229	4	NNC	ENSMUSG00000040681.17	novel	261	5	NA	NA	-15	651	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3210.85391895815	1547	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCTGATTAATTTTCT	NA	False	NA	-6	True	AATAAA	-24	NA	95928944	95922782	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_95923618_95925922_95926046_95928352_95928404_95928724
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051190	chr16	-	1178	4	NNC	ENSMUSG00000040681.17	novel	261	5	NA	NA	-4	646	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3324.58461899963	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAATGCCTGATTAAT	NA	False	NA	-11	True	AATAAA	-19	NA	95928933	95922787	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_95923611_95925922_95926046_95928352_95928404_95928752
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051192	chr16	-	1211	5	NNC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	-4	646	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3354.05280034468	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAATGCCTGATTAAT	NA	False	NA	-11	True	AATAAA	-19	NA	95928933	95922787	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_95923611_95925913_95926046_95928352_95928404_95928510_95928541_95928758
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051213	chr16	-	1199	3	NNC	ENSMUSG00000040681.17	novel	261	5	NA	NA	-4	646	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3266.5	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAATGCCTGATTAAT	NA	False	NA	-11	True	AATAAA	-19	NA	95928933	95922787	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_95923618_95925922_95926046_95928687
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051217	chr16	-	1194	4	NNC	ENSMUSG00000040681.17	novel	261	5	NA	NA	-4	646	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3327.64451226389	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAATGCCTGATTAAT	NA	False	NA	-11	True	AATAAA	-19	NA	95928933	95922787	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_95923618_95925913_95926046_95928352_95928404_95928752
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051218	chr16	-	1175	4	NNC	ENSMUSG00000040681.17	novel	261	5	NA	NA	-4	646	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2980.55076938624	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAATGCCTGATTAAT	NA	False	NA	-11	True	AATAAA	-19	NA	95928933	95922787	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_95923618_95925922_95926046_95928583_95928662_95928789
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051223	chr16	-	1212	6	NNC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	-4	646	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2606.92672701018	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAATGCCTGATTAAT	NA	False	NA	-11	True	AATAAA	-19	NA	95928933	95922787	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928631_95928662_95928785
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051224	chr16	-	1212	6	NNC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	-4	646	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2588.28859287368	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAATGCCTGATTAAT	NA	False	NA	-11	True	AATAAA	-19	NA	95928933	95922787	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_95923618_95925922_95926046_95928352_95928404_95928506_95928541_95928631_95928662_95928789
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051226	chr16	-	1073	3	NIC	ENSMUSG00000040681.17	novel	261	5	NA	NA	20	646	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	3266	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAATGCCTGATTAAT	NA	False	NA	-11	True	AATAAA	-19	NA	95928909	95922787	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_-_95923618_95925922_95926046_95928789
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051228	chr16	-	1062	3	NNC	ENSMUSG00000040681.17	novel	261	5	NA	NA	-4	646	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	43.5	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAATGCCTGATTAAT	NA	False	NA	-11	True	AATAAA	-19	NA	95928933	95922787	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_95923618_95928352_95928404_95928752
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051229	chr16	-	1133	4	NNC	ENSMUSG00000040681.17	novel	261	5	NA	NA	28	646	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3210.85391895815	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAATGCCTGATTAAT	NA	False	NA	-11	True	AATAAA	-19	NA	95928901	95922787	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_95923618_95925922_95926046_95928352_95928404_95928772
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051232	chr16	-	1082	4	NNC	ENSMUSG00000040681.17	novel	261	5	NA	NA	-26	646	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3210.85391895815	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAATGCCTGATTAAT	NA	False	NA	-11	True	AATAAA	-19	NA	95928692	95922787	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr16_-_95923618_95925922_95926046_95928352_95928404_95928614
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051364	chr16	+	601	6	NIC	ENSMUSG00000080717.11	novel	669	6	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	53.1014124105941	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGTCTTAGCTACATTT	NA	False	NA	NA	False	NA	NA	NA	97798523	97832638	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_+_97798637_97809828_97809956_97810143_97810205_97811318_97811369_97816865_97816920_97832442
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051366	chr16	+	497	4	NIC	ENSMUSG00000080717.11	novel	546	5	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	57.6945982451275	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGTCTTAGCTACATTT	NA	False	NA	NA	False	NA	NA	NA	97798523	97832638	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr16_+_97798637_97809828_97809956_97810143_97810205_97832442
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051376	chr16	-	168	1	Intergenic	novelGene_164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGCCTGTGTCATTCG	NA	False	NA	NA	False	NA	NA	NA	97827456	97827288	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr16_-_97827300_97827500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051398	chr17	-	1237	6	NIC	ENSMUSG00000036983.8	novel	1402	7	NA	NA	-8	6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	33.0611554547024	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTAACAGCTCAAAGAAAAT	NA	False	NA	NA	False	AATAAA	-22	NA	3608037	3569524	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_3570071_3571919_3572048_3586352_3586473_3595857_3595967_3605206_3605359_3607855
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051400	chr17	-	1370	7	NNC	ENSMUSG00000036983.8	novel	1402	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	31.0626606859246	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAACCTAACAGCTCAAA	NA	False	NA	NA	False	AATAAA	-16	NA	3608030	3569530	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_3570071_3571919_3572038_3586348_3586473_3593371_3593524_3595857_3595967_3605206_3605359_3607855
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051421	chr17	-	1570	4	FSM	ENSMUSG00000004945.16	ENSMUST00000005053.14	948	4	-23	-599	-7	599	multi-exon	FALSE	canonical	3	675	junction_1	16.0485374896143	2846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTTTATCAATTATTT	3445	False	NA	NA	False	AGTAAA	-27	NA	5490541	5460545	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_5461743_5483716_5483855_5489806_5489908_5490407
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051438	chr17	-	949	4	NNC	ENSMUSG00000004945.16	novel	948	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	318.670502068969	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGGGCGTGTGTGTCTGT	3455	False	NA	-7	True	NA	NA	NA	5490531	5461143	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_5461743_5483716_5483855_5489819_5489908_5490407
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051462	chr17	-	639	1	FSM	ENSMUSG00000068120.5	ENSMUST00000181584.2	441	1	-60	-138	-60	138	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTATTAATAAGATGAAAAAA	NA	False	NA	NA	False	AATAAA	-5	NA	5866975	5866336	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_5866300_5867000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051478	chr17	-	190	1	Intergenic	novelGene_165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTGAATTGGCTTTGTTT	5697	False	NA	NA	False	NA	NA	NA	6126912	6126722	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_-_6126700_6126900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051496	chr17	+	646	1	NIC	ENSMUSG00000034345.15	novel	2245	3	NA	NA	4541	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTGGTTAAATTATC	6375	False	NA	13	True	ATTAAA	-17	NA	6134745	6135391	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_6134700_6135400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051503	chr17	+	270	1	ISM	ENSMUSG00000038141.12	ENSMUST00000232383.2	4499	17	51185	0	10442	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6358319	6358589	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_6358300_6358600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051524	chr17	-	1397	3	ISM	ENSMUSG00000092074.3	ENSMUST00000232591.2	3541	4	-21	4204	-21	-2550	5prime_fragment	FALSE	canonical	3	2579	junction_2	1405	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6367714	6360818	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_6362108_6365191_6365234_6367648
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051535	chr17	+	1047	6	NNC	ENSMUSG00000096255.3	novel	771	5	NA	NA	-9120	1	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	3964.15931062312	234	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTGTTCCTTGTAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	6688390	6703696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_6688509_6694226_6694511_6699278_6699321_6702406_6702531_6702868_6702947_6703295
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051561	chr17	+	829	5	NNC	ENSMUSG00000096255.3	novel	771	5	NA	NA	61	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_4	3248.12780690662	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6697571	6703695	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_6697638_6699278_6699321_6702406_6702531_6702868_6703066_6703295
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051570	chr17	+	693	5	NNC	ENSMUSG00000096255.3	novel	771	5	NA	NA	66	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	3249.46614846193	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6697576	6703695	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_6697638_6699278_6699321_6702406_6702531_6702868_6702947_6703307
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051571	chr17	+	696	5	NNC	ENSMUSG00000096255.3	novel	771	5	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3810.09258417693	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6697576	6703695	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_6697638_6699278_6699312_6702406_6702531_6702868_6702947_6703295
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051573	chr17	+	627	4	NIC	ENSMUSG00000096255.3	novel	771	5	NA	NA	66	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_3	2254.06610373343	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6697576	6703695	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_6697638_6699278_6699321_6702406_6702531_6703295
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051590	chr17	+	402	1	Genic_Genomic	ENSMUSG00000096255.3	novel	NA	NA	NA	NA	5784	1	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTGTTCCTTGTAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	6703294	6703696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr17_+_6703300_6703700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051594	chr17	-	267	1	ISM	ENSMUSG00000096780.8	ENSMUST00000180035.8	2426	9	10953	2	10303	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	0	True	AATAAA	-21	NA	6706191	6705924	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_6705900_6706200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051597	chr17	-	657	6	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10110	-14438	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	272.183320576409	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGAAGCCAG	2358	False	NA	NA	False	NA	NA	NA	6744531	6723238	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_6723410_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051629	chr17	+	935	6	NNC	ENSMUSG00000000579.15	novel	2589	5	NA	NA	-25	352	at_least_one_novel_splicesite	TRUE	canonical	3	41	junction_2	4194.75856754593	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTGTTCCTTGTAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	6869165	6875300	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_6869236_6870885_6870928_6873123_6873344_6874010_6874135_6874472_6874551_6874899
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051639	chr17	+	841	5	NNC	ENSMUSG00000000579.15	novel	2589	5	NA	NA	-23	351	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	3873.29685152068	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6869167	6875299	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_6869236_6870885_6870928_6873713_6873967_6874472_6874551_6874899
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051641	chr17	+	1399	3	FSM	ENSMUSG00000000579.15	ENSMUST00000138598.8	3250	3	-23	1874	-23	351	multi-exon	FALSE	canonical	3	5304	junction_1	1594.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6869167	6875299	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_6869236_6870885_6870928_6874010
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051652	chr17	+	1059	4	FSM	ENSMUSG00000000579.15	ENSMUST00000124894.2	675	4	-33	-351	-21	351	multi-exon	FALSE	canonical	3	5304	junction_1	1851.44670160631	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6869169	6875299	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_6869236_6870885_6870928_6874010_6874135_6874472
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051653	chr17	+	396	3	NNC	ENSMUSG00000000579.15	novel	3250	3	NA	NA	-21	351	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2652	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6869169	6875299	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_6869236_6870885_6870919_6875002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051666	chr17	+	1043	4	NIC	ENSMUSG00000000579.15	novel	2589	5	NA	NA	-16	351	intron_retention	FALSE	canonical	3	5304	junction_1	1703.79856660215	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6869174	6875299	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_6869236_6870885_6870928_6874010_6874551_6874899
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051673	chr17	+	576	4	NIC	ENSMUSG00000000579.15	novel	2589	5	NA	NA	-11	351	combination_of_known_splicesites	FALSE	canonical	2	48	junction_2	3761.62104535915	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6869179	6875299	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_6869236_6870885_6870928_6874472_6874551_6874899
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051685	chr17	-	665	6	NNC	ENSMUSG00000095677.3	novel	3545	4	NA	NA	-16	2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	3551.37959672013	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATGTAGCTTTGATTTA	NA	False	NA	NA	False	AATAAA	-21	NA	6923233	6913998	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_6914260_6914426_6914526_6917085_6917164_6917501_6917626_6920709_6920752_6923172
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051697	chr17	-	708	5	NNC	ENSMUSG00000095677.3	novel	771	5	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3221.36046570389	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6923240	6916336	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_6916733_6917085_6917164_6917501_6917626_6920709_6920752_6923172
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051720	chr17	-	850	2	ISM	ENSMUSG00000095677.3	ENSMUST00000179554.3	771	5	66	3626	-16	-3626	5prime_fragment	FALSE	canonical	3	5415	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATGTCTTACAACTAC	NA	False	NA	NA	False	NA	NA	NA	6923233	6919962	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_6920752_6923172
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051728	chr17	-	215	1	ISM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	44529	0	4566	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGAGCGTTTATTGAGA	NA	False	NA	1	True	AATAAA	-20	NA	7005654	7005439	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_7005400_7005700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051736	chr17	-	898	4	NNC	ENSMUSG00000052397.9	novel	3164	13	NA	NA	1778	-234	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	482.500662060571	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTCTGATTGCATGGG	NA	False	NA	-1	True	AATAAA	-14	NA	7008442	7005673	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_7006029_7006656_7006867_7007028_7007281_7008361
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051740	chr17	-	1519	3	NNC	ENSMUSG00000052397.9	novel	3164	13	NA	NA	1778	-234	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	487.5	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTCTGATTGCATGGG	NA	False	NA	-1	True	AATAAA	-14	NA	7008442	7005673	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_7006867_7007028_7007274_7008361
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051741	chr17	-	1523	3	NNC	ENSMUSG00000052397.9	novel	3164	13	NA	NA	1778	-234	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	487.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTCTGATTGCATGGG	NA	False	NA	-1	True	AATAAA	-14	NA	7008442	7005673	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_7006867_7007028_7007274_7008357
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051742	chr17	-	1530	3	NNC	ENSMUSG00000052397.9	novel	3164	13	NA	NA	1778	-234	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	533	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTCTGATTGCATGGG	NA	False	NA	-1	True	AATAAA	-14	NA	7008442	7005673	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_7006867_7007024_7007281_7008361
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051756	chr17	-	254	1	Genic_Genomic	ENSMUSG00000052031.9	novel	NA	NA	NA	NA	5901	9	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCATTCAGCCAGTGTC	NA	False	NA	-10	True	AATAAA	-28	NA	7222654	7222400	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr17_-_7222400_7222700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051772	chr17	+	397	1	ISM	ENSMUSG00000023809.11	ENSMUST00000024575.8	5406	21	130184	2620	39663	-2620	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCCACTGTCTC	NA	False	NA	NA	False	NA	NA	NA	7567697	7568094	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_7567700_7568100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051781	chr17	-	1037	9	FSM	ENSMUSG00000095687.3	ENSMUST00000097420.7	1793	9	253	503	-59	-503	multi-exon	FALSE	canonical	0	0	junction_6	240.913852600883	693	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGTGAAGGAGTTGG	NA	False	NA	11	True	AAAAAG	-26	NA	8366676	8347410	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_8347719_8349056_8349132_8350874_8350921_8353735_8353850_8356719_8356791_8360427_8360486_8361349_8361403_8364373_8364435_8366425
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051823	chr17	+	1066	8	FSM	ENSMUSG00000073468.13	ENSMUST00000154553.2	1049	8	-14	-3	-14	3	multi-exon	FALSE	canonical	3	730	junction_5	48.6457414710199	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGGATCAACTGTATAA	2909	False	NA	NA	False	AATAAA	-22	NA	8529919	8546277	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_8530118_8537675_8537763_8538250_8538334_8539431_8539514_8540631_8540668_8542108_8542168_8543265_8543296_8545786
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051826	chr17	+	875	6	FSM	ENSMUSG00000073468.13	ENSMUST00000145276.8	810	6	-63	-2	4	0	multi-exon	FALSE	canonical	3	190	junction_1	242.374586126516	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTCTGGATCAACTGTA	2927	False	NA	NA	False	AATAAA	-19	NA	8529937	8546274	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_8530118_8539431_8539514_8540631_8540668_8542108_8542168_8543265_8543296_8545786
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051843	chr17	+	200	1	Intergenic	novelGene_166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTTAGCCGGGCGGTG	NA	False	NA	NA	False	NA	NA	NA	8547031	8547231	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_+_8547000_8547200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051845	chr17	+	516	2	NNC	ENSMUSG00000058159.15	novel	1755	11	NA	NA	-333	-50037	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGGGTTTTTTTGTTT	8251	False	NA	NA	False	ATTAAA	-28	NA	8590894	8591523	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_8591114_8591226
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051862	chr17	-	1901	7	ISM	ENSMUSG00000062078.16	ENSMUST00000233645.2	8547	8	36405	5991	-42	501	3prime_fragment	FALSE	canonical	3	1001	junction_1	105.822834124882	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGAAACCCTTTATTT	NA	False	NA	NA	False	TATAAA	-14	NA	10501904	10427520	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051867	chr17	-	372	2	ISM	ENSMUSG00000062078.16	ENSMUST00000233828.2	5428	7	36386	63640	-42	-60418	internal_fragment	FALSE	canonical	3	1078	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTGCACTTGTACAGGG	NA	False	NA	NA	False	NA	NA	NA	10501904	10492757	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_10492993_10501767
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051897	chr17	+	2858	13	NNC	ENSMUSG00000068039.14	novel	2446	12	NA	NA	-77886	39	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	997.264174295524	4736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTCCTGCTGTCTTT	NA	False	NA	7	True	NA	NA	NA	13056701	13143993	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_13057120_13135313_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051911	chr17	-	1077	4	NIC	ENSMUSG00000057388.10	novel	1219	4	NA	NA	-15	4	combination_of_known_junctions	FALSE	canonical	2	35	junction_2	483.678267722116	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTACTGTGTTGTGCTCT	NA	False	NA	-5	True	ATTAAA	-22	NA	13135005	13130231	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_13130637_13132656_13132889_13134443_13134712_13134833
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051922	chr17	-	881	3	ISM	ENSMUSG00000057388.10	ENSMUST00000079121.4	1219	4	464	-4	188	4	3prime_fragment	FALSE	canonical	3	996	junction_2	35	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTACTGTGTTGTGCTCT	NA	False	NA	-5	True	ATTAAA	-22	NA	13134768	13130231	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_13130637_13132656_13132889_13134524
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051926	chr17	-	410	1	Genic_Genomic	ENSMUSG00000057388.10	novel	NA	NA	NA	NA	3870	4	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTACTGTGTTGTGCTCT	1166	False	NA	-5	True	ATTAAA	-22	NA	13130641	13130231	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr17_-_13130200_13130600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051945	chr17	+	2252	11	FSM	ENSMUSG00000068039.14	ENSMUST00000089024.13	1902	11	62	-412	9	-99	multi-exon	FALSE	canonical	3	149	junction_1	1038.79458989735	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGGTTTCTCTGTGT	NA	False	NA	8	True	AATAAA	-16	NA	13135277	13143855	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_13135517_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000051988	chr17	+	1767	12	NNC	ENSMUSG00000068039.14	novel	2446	12	NA	NA	-10	18693	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_11	1353.92167455376	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGTTCCTGTCCTCA	NA	False	NA	2	True	ATTAAA	-16	NA	13135351	13162647	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_13135517_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146_13143323_13162525
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052026	chr17	-	1597	6	FSM	ENSMUSG00000060475.14	ENSMUST00000233867.2	446	6	0	-1151	0	-714	multi-exon	FALSE	canonical	3	14	junction_5	266.82773469038	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGTTTTTTTTAATTCA	NA	False	NA	NA	False	ATTAAA	-20	NA	13213056	13193152	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13212949
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052041	chr17	+	1302	7	NNC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	-2	-277	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1536.75116362048	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGAACAGCGCATACTC	NA	False	NA	31	True	ATTAAA	-19	NA	13225730	13234226	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_13225849_13226280_13226423_13226727_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052043	chr17	+	1297	7	NNC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	-2	-262	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1532.75847919871	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGTGTGAATTGCTCT	NA	False	NA	46	True	ATTAAA	-34	NA	13225730	13234241	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_13225849_13226280_13226423_13226747_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052053	chr17	+	1170	6	NNC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	-2	-262	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1304.96022927904	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGTGTGAATTGCTCT	NA	False	NA	46	True	ATTAAA	-34	NA	13225730	13234241	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_13225864_13226747_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052088	chr17	+	917	5	NNC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	-17	-262	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1612.68353606652	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGTGTGAATTGCTCT	NA	False	NA	46	True	ATTAAA	-34	NA	13226865	13234241	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_13226950_13227070_13227274_13229406_13229528_13232319_13232500_13233912
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052139	chr17	-	317	2	FSM	ENSMUSG00000046991.13	ENSMUST00000228869.2	1800	2	16	1467	16	1	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTCTCAGTTCAGTTGC	NA	False	NA	NA	False	NA	NA	NA	15163404	15159571	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_15159843_15163358
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052141	chr17	-	440	2	FSM	ENSMUSG00000046991.13	ENSMUST00000228221.2	413	2	-26	-1	-17	1	multi-exon	FALSE	canonical	3	13	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTCTCAGTTCAGTTGC	NA	False	NA	NA	False	NA	NA	NA	15163365	15159571	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_15159843_15163196
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052151	chr17	+	1780	1	NIC	ENSMUSG00000050088.10	novel	2506	2	NA	NA	-18	5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTAAGGTCATCGTTAAT	NA	False	NA	13	True	AATAAA	-18	NA	15163473	15165253	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_15163500_15165300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052159	chr17	-	121	1	Genic_Genomic	ENSMUSG00000023883.14	novel	NA	NA	NA	NA	1707	8	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAACATCAAGTTGATT	NA	False	NA	-11	True	AATAAA	-24	NA	15165383	15165262	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr17_-_15165300_15165400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052165	chr17	-	172	1	Genic_Genomic	ENSMUSG00000023883.14	novel	NA	NA	NA	NA	-1079	2	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTGTCATCTTTTGCA	NA	False	NA	0	True	AATAAA	-22	NA	15168169	15167997	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr17_-_15168000_15168200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052217	chr17	+	840	3	ISM	ENSMUSG00000036552.20	ENSMUST00000228803.2	1271	6	3161	-2	458	0	3prime_fragment	FALSE	canonical	3	59	junction_2	18.5	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATGTTGCCTTTCATTT	NA	False	NA	14	True	ATTAAA	-27	NA	15280173	15284494	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_15280247_15281330_15281445_15283841
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052221	chr17	+	455	3	ISM	ENSMUSG00000036552.20	ENSMUST00000231568.2	1342	8	7109	-1	497	1	3prime_fragment	FALSE	canonical	0	0	junction_2	48	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATTGTCATGTGTTAAT	NA	False	NA	NA	False	NA	NA	NA	15280212	15310307	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_15280247_15281330_15281445_15310000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052224	chr17	+	779	3	ISM	ENSMUSG00000036552.20	ENSMUST00000231241.2	1571	7	6892	-9	497	0	3prime_fragment	FALSE	canonical	3	17	junction_2	39.5	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATGTTGCCTTTCATTT	NA	False	NA	14	True	ATTAAA	-27	NA	15280212	15284494	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_15280247_15281330_15281445_15283863
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052240	chr17	-	1187	5	FSM	ENSMUSG00000097624.3	ENSMUST00000181658.2	1179	5	0	-8	0	4	multi-exon	FALSE	canonical	3	33	junction_2	9.14808723176599	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTTTCTTTCTTTCT	NA	False	NA	0	True	GATAAA	-20	NA	15461045	15451838	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_15452674_15453041_15453145_15454190_15454265_15460531_15460624_15460962
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052243	chr17	-	979	3	NIC	ENSMUSG00000097624.3	novel	1179	5	NA	NA	29	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	27.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTTCTTTCTTTCTTT	NA	False	NA	-2	True	GATAAA	-18	NA	15461016	15451840	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_15452674_15460531_15460624_15460962
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052251	chr17	-	870	4	NNC	ENSMUSG00000097624.3	novel	1218	5	NA	NA	0	-4590	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	16.779617264871	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGCTGCTCATCTTTCT	NA	False	NA	NA	False	AGTAAA	-30	NA	15461045	15456436	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_15456884_15457287_15457536_15460531_15460624_15460962
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052282	chr17	-	812	6	NNC	ENSMUSG00000014769.11	novel	1758	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_3	1975.93578843038	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTTCTTACACTGTGT	NA	False	NA	-13	True	ATTAAA	-15	NA	15718561	15696220	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_15696468_15697576_15697684_15710417_15710539_15713359_15713442_15714677_15714786_15718414
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052285	chr17	-	822	6	NNC	ENSMUSG00000014769.11	novel	1970	5	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1973.1696936655	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTTCTTACACTGTGT	NA	False	NA	-13	True	ATTAAA	-15	NA	15718557	15696220	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_15696468_15697571_15697684_15710417_15710548_15713359_15713442_15714677_15714786_15718414
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052310	chr17	-	507	4	NNC	ENSMUSG00000014769.11	novel	1758	6	NA	NA	-6	-63	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2398.04605645698	58	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGCGGGTCATATATTG	NA	False	NA	-76	True	NA	NA	NA	15718566	15696283	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_15696468_15697576_15697640_15714677_15714786_15718414
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052333	chr17	+	224	1	FSM	ENSMUSG00000116757.2	ENSMUST00000231695.2	798	1	629	-55	629	55	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATGTCCAATATTAGAAT	NA	False	NA	NA	False	AATATA	-22	NA	16778136	16778360	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_16778100_16778400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052446	chr17	+	800	5	NNC	ENSMUSG00000057409.8	novel	3065	5	NA	NA	-4	-2211	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	64.9519052838329	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTTGTCTGAACAGTAAT	1471	False	NA	NA	False	AATAAA	-16	NA	21709255	21727815	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_21709528_21711487_21711579_21720472_21720569_21725242_21725370_21727601
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052501	chr17	-	588	4	ISM	ENSMUSG00000063383.6	ENSMUST00000080249.6	2872	5	229	2909	229	-2909	5prime_fragment	FALSE	canonical	3	23	junction_2	0.816496580927726	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTCTTTACTGTGTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	22384942	22366248	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_22366497_22369015_22369064_22382167_22382317_22384799
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052512	chr17	-	905	7	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	-3	-1863	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	35.1946965701747	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTCTATCATTGGTC	NA	False	NA	0	True	TATAAA	-21	NA	22580384	22558832	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_22559089_22559947_22560075_22562620_22562675_22574061_22574116_22577803_22577897_22578420_22578506_22580148
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052549	chr17	-	2134	6	FSM	ENSMUSG00000062012.15	ENSMUST00000115516.11	2104	6	-31	1	-31	-1	multi-exon	TRUE	canonical	3	79	junction_1	5.98665181883831	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTGGCTCTGTGTGCTT	4792	False	NA	-1	True	ATTAAA	-20	NA	23805237	23794818	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23804934
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052551	chr17	-	635	3	FSM	ENSMUSG00000062012.15	ENSMUST00000228298.2	502	3	-88	-45	-32	45	multi-exon	FALSE	canonical	3	12	junction_1	39	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGCTTTTATGGTGTAG	4791	False	NA	NA	False	AATAAA	-19	NA	23805238	23803718	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_23803913_23804411_23804549_23804934
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052570	chr17	-	1584	12	NIC	ENSMUSG00000041319.15	novel	1504	13	NA	NA	-7	0	intron_retention	TRUE	canonical	3	423	junction_9	39.0486028998446	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	787	False	NA	-21	True	AATAAA	-14	NA	23892823	23887591	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052578	chr17	+	884	4	NNC	ENSMUSG00000023904.11	novel	597	4	NA	NA	-14	2	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	146.645453011298	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCAGCAGCCTTTGGGG	NA	False	NA	13	True	AATAAA	-21	NA	23892555	23894203	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_23892865_23892942_23893043_23893520_23893650_23893857
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052600	chr17	+	275	1	Antisense	novelGene_ENSMUSG00000023905.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTGTTTCCGTGTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	23894224	23894499	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr17_+_23894200_23894500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052605	chr17	-	447	1	ISM	ENSMUSG00000023905.16	ENSMUST00000024698.10	984	4	1577	0	662	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGGCCTGATCCCTAAC	NA	False	NA	-1	True	AATAAA	-18	NA	23894865	23894418	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_23894400_23894900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052636	chr17	-	687	3	FSM	ENSMUSG00000023911.13	ENSMUST00000024704.10	694	3	7	0	7	0	multi-exon	FALSE	canonical	3	11	junction_1	0.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTAGTTTTTGTTGTTGT	NA	False	NA	0	True	AATAAA	-26	NA	24005048	23995889	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_23996074_23998601_23999031_24004974
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052647	chr17	+	982	5	NNC	ENSMUSG00000039218.18	novel	459	3	NA	NA	390	4	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	96.5673340213967	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATAGAGGACGGTAAGT	NA	False	NA	49	True	NA	NA	NA	24022597	24029006	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_24022972_24025905_24026177_24027039_24027148_24027327_24027493_24028942
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052663	chr17	-	543	4	FSM	ENSMUSG00000055839.7	ENSMUST00000233519.2	414	4	-58	-71	-36	0	multi-exon	FALSE	canonical	3	315	junction_3	5439.43761390418	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTCTCATTTTTATTT	NA	False	NA	-3	True	AGTAAA	-18	NA	24048146	24043711	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_24043954_24046441_24046548_24047817_24047923_24048056
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052670	chr17	-	245	1	NIC	ENSMUSG00000055839.7	novel	537	4	NA	NA	3821	0	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTCTCATTTTTATTT	NA	False	NA	-3	True	AGTAAA	-18	NA	24043956	24043711	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_24043700_24044000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052690	chr17	-	409	4	NNC	ENSMUSG00000055839.7	novel	537	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5044.053330408	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGACTTTTCTGTTC	NA	False	NA	-36	True	AATAAA	-18	NA	24048075	24043782	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_24043954_24046463_24046548_24047817_24047953_24048056
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052715	chr17	-	2036	4	ISM	ENSMUSG00000016946.7	ENSMUST00000017090.6	2443	6	14170	-9	1002	9	3prime_fragment	FALSE	canonical	3	983	junction_3	72.8209371601938	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGAATATCTTGAAGTGT	NA	False	NA	-13	True	AATAAA	-29	NA	24278289	24266698	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_24268419_24274898_24275025_24276714_24276811_24278195
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052728	chr17	-	1328	10	NIC	ENSMUSG00000036820.13	novel	1496	11	NA	NA	-5	0	combination_of_known_splicesites	TRUE	canonical	3	14	junction_9	102.741435015946	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24382709	24374806	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382555
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052742	chr17	-	1089	4	FSM	ENSMUSG00000024121.14	ENSMUST00000098862.9	796	4	-5	-288	-5	1	multi-exon	FALSE	canonical	2	51	junction_3	1244.06671846811	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGTGTTCTGGCGCT	NA	False	NA	NA	False	AATAAA	-16	NA	24388656	24382838	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_24383583_24383672_24383857_24388179_24388261_24388576
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052743	chr17	-	1170	3	NNC	ENSMUSG00000024121.14	novel	1183	3	NA	NA	18	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	708	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGTGTTCTGGCGCT	NA	False	NA	NA	False	AATAAA	-16	NA	24388417	24382838	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_24383583_24383668_24383857_24388179
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052776	chr17	+	1948	9	FSM	ENSMUSG00000034681.18	ENSMUST00000163717.2	1920	9	-25	-3	-1	0	multi-exon	FALSE	canonical	3	410	junction_1	446.592917963328	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGCTGGTTTTACTGT	888	False	NA	NA	False	AATAAA	-21	NA	24633623	24644872	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_24633709_24634014_24634137_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052781	chr17	+	1751	8	NNC	ENSMUSG00000034681.18	novel	1769	8	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	663.362369036005	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGCTGGTTTTACTGT	908	False	NA	NA	False	AATAAA	-21	NA	24633643	24644872	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_24633709_24634014_24634137_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641282_24643375_24643518_24644059
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052800	chr17	+	1148	7	FSM	ENSMUSG00000024132.7	ENSMUST00000234304.2	1137	7	-10	-1	-10	1	multi-exon	FALSE	canonical	3	455	junction_1	41.5508390074403	1278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTAGCTCTTGTGTTCC	4830	False	NA	12	True	TATAAA	-25	NA	24645604	24658295	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_24645717_24645826_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052808	chr17	+	1000	7	FSM	ENSMUSG00000024132.7	ENSMUST00000024946.7	1086	7	7	79	7	21	multi-exon	FALSE	canonical	1	5	junction_2	202.517008887868	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGCCACATATGTGCCT	4889	False	NA	15	True	NA	NA	NA	24645663	24658215	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_24645717_24645826_24645914_24652115_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052839	chr17	+	1390	1	FSM	ENSMUSG00000043445.8	ENSMUST00000234216.2	2428	1	1286	-248	1286	0	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCCTCTAATTT	NA	False	NA	25	True	ATTAAA	-22	NA	24690694	24692084	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_24690700_24692100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052856	chr17	+	498	1	FSM	ENSMUSG00000093565.2	ENSMUST00000176215.2	477	1	-20	-1	-1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTTTCAGACGTTGTG	4763	False	NA	14	True	AATAAA	-17	NA	24747220	24747718	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_24747200_24747700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052877	chr17	+	991	6	FSM	ENSMUSG00000041429.4	ENSMUST00000234635.2	893	6	-39	-59	0	1	multi-exon	FALSE	canonical	3	27	junction_1	84.8042451767599	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGGCCCGTTGGCTTC	906	False	NA	12	True	AATAAA	-24	NA	24851653	24857812	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_24851738_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052881	chr17	+	911	5	NIC	ENSMUSG00000041429.4	novel	2084	6	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	98.3142283700584	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGGCCCGTTGGCTTC	906	False	NA	12	True	AATAAA	-24	NA	24851653	24857812	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_24851829_24852900_24853140_24854561_24854722_24857397_24857504_24857581
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052882	chr17	+	1079	6	NNC	ENSMUSG00000041429.4	novel	2084	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	89.8073493651828	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGGCCCGTTGGCTTC	906	False	NA	12	True	AATAAA	-24	NA	24851653	24857812	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_24851829_24852903_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052911	chr17	-	740	2	FSM	ENSMUSG00000071230.8	ENSMUST00000095544.6	638	2	-101	-1	-101	1	multi-exon	FALSE	canonical	3	16	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCGTGTGACCCTTTTTC	8856	False	NA	NA	False	AATAAA	-21	NA	24877532	24876302	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_24876479_24876968
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052938	chr17	-	190	2	FSM	ENSMUSG00000090101.2	ENSMUST00000161706.2	183	2	0	-7	0	7	multi-exon	FALSE	canonical	3	215	junction_1	0	758	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTGGTGTTTTTTGGTT	4301	False	NA	-1	True	AATAAA	-22	NA	24938939	24938497	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_24938582_24938833
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052941	chr17	-	373	1	FSM	ENSMUSG00000089255.3	ENSMUST00000158630.3	128	1	-99	-146	-99	146	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCGTATGTTGGTGTTTT	4364	False	NA	-7	True	AATAAA	-16	NA	24938876	24938503	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_24938500_24938900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052961	chr17	+	958	6	NNC	ENSMUSG00000044533.16	novel	998	6	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4389.40749532326	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTTTTTTGTCTGT	6235	False	NA	2	True	AATAAA	-21	NA	24939081	24940901	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_24939107_24939246_24939427_24939507_24939710_24939942_24940277_24940596_24940689_24940776
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052964	chr17	+	958	6	NNC	ENSMUSG00000044533.16	novel	998	6	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	4114.351244121	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTTTTTTGTCTGT	6235	False	NA	2	True	AATAAA	-21	NA	24939081	24940901	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_24939107_24939246_24939427_24939507_24939706_24939942_24940281_24940596_24940689_24940776
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052968	chr17	+	1191	5	NIC	ENSMUSG00000044533.16	novel	998	6	NA	NA	-2	1	intron_retention	FALSE	canonical	3	3280	junction_1	3156.98942823697	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTTTTTTGTCTGT	6235	False	NA	2	True	AATAAA	-21	NA	24939081	24940901	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_24939107_24939246_24939427_24939507_24940277_24940596_24940689_24940776
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052987	chr17	+	1729	2	FSM	ENSMUSG00000044533.16_ENSMUSG00000077709.3	ENSMUST00000132803.2	389	2	-1340	0	-1	0	multi-exon	FALSE	canonical	3	10975	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATGTTTTTTTTTGTCT	6236	False	NA	0	True	AATAAA	-19	NA	24939082	24940899	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_24940689_24940776
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052994	chr17	+	1038	5	ISM	ENSMUSG00000044533.16	ENSMUST00000170715.8	998	6	47	1	0	0	intron_retention	FALSE	canonical	3	3280	junction_1	2907.57519249288	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATGTTTTTTTTTGTCT	6237	False	NA	0	True	AATAAA	-19	NA	24939083	24940899	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_24939107_24939246_24939427_24939507_24939706_24939942_24940277_24940596
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000052998	chr17	+	949	6	NNC	ENSMUSG00000044533.16	novel	998	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_4	4113.72869304722	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATGTTTTTTTTTGTCT	6237	False	NA	0	True	AATAAA	-19	NA	24939083	24940899	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_24939107_24939246_24939427_24939507_24939706_24939942_24940281_24940601_24940689_24940776
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053001	chr17	+	616	5	NIC	ENSMUSG00000044533.16	novel	998	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	18	junction_3	4264.10054994016	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATGTTTTTTTTTGTCT	6237	False	NA	0	True	AATAAA	-19	NA	24939083	24940899	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_24939107_24939246_24939427_24939507_24939706_24940596_24940689_24940776
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053007	chr17	+	1033	5	NIC	ENSMUSG00000044533.16	novel	998	6	NA	NA	0	1	intron_retention	FALSE	canonical	3	3280	junction_1	3188.11441137234	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTTTTTTGTCTGT	6237	False	NA	2	True	AATAAA	-21	NA	24939083	24940901	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_24939107_24939246_24939706_24939942_24940277_24940596_24940689_24940776
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053029	chr17	+	1818	1	FSM	ENSMUSG00000077709.3	ENSMUST00000104521.3	134	1	-662	-1022	-662	1022	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTTTTTTGTCTGT	6237	False	NA	2	True	AATAAA	-21	NA	24939083	24940901	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_24939100_24940900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053058	chr17	-	161	1	ISM	ENSMUSG00000040048.15	ENSMUST00000141324.8	430	2	429	0	429	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTCTGGTGACTAAA	2046	False	NA	NA	False	AATAAA	-22	NA	24941194	24941033	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_24941000_24941200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053059	chr17	-	873	4	NIC	ENSMUSG00000040048.15	novel	732	4	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	1013.29309130621	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTCTGGTGACTAAA	NA	False	NA	NA	False	AATAAA	-22	NA	24943397	24941033	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_24941195_24941354_24941495_24941628_24941964_24943160
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053065	chr17	-	503	4	NNC	ENSMUSG00000040048.15	novel	732	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_3	1010.95202655715	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTCTGGTGACTAAA	NA	False	NA	NA	False	AATAAA	-22	NA	24943397	24941033	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_24941195_24941354_24941495_24941628_24941768_24943334
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053106	chr17	+	760	1	NIC	ENSMUSG00000075705.14	novel	886	5	NA	NA	5337	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTTTGTTGTCTCATG	NA	False	NA	19	True	AATAAA	-19	NA	24960992	24961752	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_24961000_24961800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053126	chr17	+	258	1	ISM	ENSMUSG00000024158.18	ENSMUST00000118788.8	1191	9	13703	0	5992	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTTATGGACTCTTT	NA	False	NA	11	True	AAAAAG	-24	NA	25083166	25083424	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_25083200_25083400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053179	chr17	-	1507	8	FSM	ENSMUSG00000073436.12	ENSMUST00000121542.2	1521	8	23	-9	-2	9	multi-exon	TRUE	canonical	3	24	junction_1	4.68606270481621	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGAAGGCTCTTTTAAT	1887	False	NA	NA	False	GATAAA	-25	NA	25114038	25111116	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_25111658_25111728_25111919_25112012_25112129_25112278_25112373_25112524_25112617_25113104_25113198_25113544_25113682_25113794
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053204	chr17	+	1141	1	NIC	ENSMUSG00000038880.14	novel	918	3	NA	NA	14	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGGTTTCATTACA	NA	False	NA	16	True	AATAAA	-16	NA	25114122	25115263	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_25114100_25115300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053255	chr17	-	440	3	FSM	ENSMUSG00000024165.10	ENSMUST00000233316.2	1705	3	-11	1276	-2	69	multi-exon	TRUE	canonical	3	1697	junction_1	67.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTCCAAAGCAGTGTGAC	4815	False	NA	NA	False	AATAAA	-26	NA	25179621	25167543	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_25167755_25174991_25175141_25179541
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053282	chr17	+	1202	6	FSM	ENSMUSG00000015126.10	ENSMUST00000063574.7	1192	6	-9	-1	-9	1	multi-exon	FALSE	canonical	3	375	junction_2	34.9685573050991	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGCTTTGTACGTGGC	4594	False	NA	29	True	AATAAA	-19	NA	25459134	25461773	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_25459339_25459417_25459638_25460037_25460232_25460661_25460836_25461132_25461197_25461427
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053313	chr17	+	1643	4	NIC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	29	1	intron_retention	FALSE	canonical	3	415	junction_1	23.4426012966897	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGCTTTGTACGTGGC	4632	False	NA	29	True	AATAAA	-19	NA	25459172	25461773	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_25460232_25460661_25460836_25461132_25461197_25461427
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053322	chr17	+	285	1	Genic_Genomic	ENSMUSG00000015126.10	novel	NA	NA	NA	NA	2345	1	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGCTTTGTACGTGGC	6948	False	NA	29	True	AATAAA	-19	NA	25461488	25461773	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr17_+_25461500_25461800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053326	chr17	-	680	1	Intergenic	novelGene_167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGGTTGTGTCCTCT	NA	False	NA	-1	True	ATTAAA	-19	NA	25480163	25479483	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_-_25479500_25480200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053330	chr17	-	2524	7	FSM	ENSMUSG00000015120.16	ENSMUST00000174031.8	824	7	96	-1796	-55	1406	multi-exon	FALSE	canonical	3	4214	junction_6	321.557148886477	3520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGGTTGTGTCCTCT	4692	False	NA	-1	True	ATTAAA	-19	NA	25492412	25479483	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492294
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053338	chr17	-	1142	7	FSM	ENSMUSG00000015120.16	ENSMUST00000049911.16	1138	7	0	-4	0	4	multi-exon	TRUE	canonical	3	77	junction_6	1792.78505404301	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGCATTATCATCATT	3820	False	NA	NA	False	AATAAA	-18	NA	25493284	25480885	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25493146
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053417	chr17	+	2023	11	FSM	ENSMUSG00000002280.12	ENSMUST00000002350.11	2555	11	19	513	-9	23	multi-exon	FALSE	canonical	3	237	junction_8	20.6145579627602	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCCTTTCAAAGTTTTA	6939	False	NA	34	True	NA	NA	NA	25992768	26001793	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053421	chr17	-	1320	9	FSM	ENSMUSG00000061046.10	ENSMUST00000077938.10	1405	9	87	-2	-4	2	multi-exon	FALSE	canonical	3	40	junction_4	8.07387763097757	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCAGGTCTGTTTATTAG	4340	False	NA	1	True	NA	NA	NA	26004560	26001760	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_26002153_26002476_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26003977_26004169_26004401
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053456	chr17	-	1043	4	FSM	ENSMUSG00000002274.14	ENSMUST00000165838.9	2751	4	104	1604	-11	0	multi-exon	FALSE	canonical	3	84	junction_2	5.71547606649408	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTAGTCATGGTCTT	5997	False	NA	-2	True	NA	NA	NA	26015953	26013798	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_26014266_26014347_26014408_26015214_26015616_26015838
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053493	chr17	-	382	1	NIC	ENSMUSG00000039615.10	novel	1803	7	NA	NA	1904	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCATGTGCTGGTGCAGT	8691	False	NA	-17	True	AATAAA	-17	NA	26049989	26049607	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_26049600_26050000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053530	chr17	+	1025	5	FSM	ENSMUSG00000025731.17	ENSMUST00000169308.8	1026	5	-3	4	-2	-4	multi-exon	FALSE	canonical	3	348	junction_1	48.8287824955732	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTGCTGGGAATACCTG	7192	False	NA	35	True	AATAAA	-36	NA	26094471	26096139	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095468_26095537_26095634
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053556	chr17	-	2176	9	FSM	ENSMUSG00000036775.14	ENSMUST00000040907.8	2224	9	29	19	-8	0	multi-exon	FALSE	canonical	3	125	junction_7	27.3849867628232	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACTGATTCTACCATGGA	NA	False	NA	-23	True	NA	NA	NA	26309282	26300203	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26308937
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053568	chr17	-	662	3	NIC	ENSMUSG00000024177.10	novel	1006	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	158	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTACTTACTAGTTCTG	NA	False	NA	0	True	ATTAAA	-22	NA	26314447	26310707	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_26311127_26313110_26313245_26314338
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053571	chr17	-	862	5	NNC	ENSMUSG00000024177.10	novel	1006	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	140.316606287353	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTACTTACTAGTTCTG	NA	False	NA	0	True	ATTAAA	-22	NA	26314448	26310707	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_26311127_26312590_26312704_26312832_26312935_26313110_26313245_26314354
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053576	chr17	-	870	5	NNC	ENSMUSG00000024177.10	novel	1006	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	132.902925099488	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTACTTACTAGTTCTG	NA	False	NA	0	True	ATTAAA	-22	NA	26314447	26310707	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_26311127_26312590_26312704_26312832_26312928_26313110_26313245_26314338
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053611	chr17	+	1025	5	FSM	ENSMUSG00000024181.10	ENSMUST00000127647.3	1002	5	-22	-1	2	1	multi-exon	FALSE	canonical	0	0	junction_2	671.536670629386	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGTCCTGTGAGTTCT	NA	False	NA	22	True	AGTAAA	-22	NA	26342495	26345588	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344473_26344539_26345244
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053656	chr17	+	1428	10	FSM	ENSMUSG00000024188.17	ENSMUST00000114976.9	4934	10	-29	3535	26	1	multi-exon	FALSE	canonical	3	213	junction_9	132.110877487879	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGTGTTGGGGTATCTG	NA	False	NA	11	True	AATAAA	-20	NA	26471895	26500943	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053659	chr17	+	1746	10	FSM	ENSMUSG00000024188.17	ENSMUST00000148894.2	1672	10	-77	3	26	0	multi-exon	FALSE	canonical	3	95	junction_2	196.74976273379	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTTTACATTAGTGT	NA	False	NA	14	True	ATTAAA	-26	NA	26471895	26499694	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_26472066_26472947_26473019_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053675	chr17	+	491	1	FSM	ENSMUSG00000089764.3	ENSMUST00000162696.3	1048	1	1019	-462	1019	462	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTACCATATGTCCTGC	NA	False	NA	NA	False	AATAAA	-38	NA	26489329	26489820	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_26489300_26489800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053679	chr17	+	479	1	ISM	ENSMUSG00000024188.17	ENSMUST00000133032.8	2670	9	27258	0	12967	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTTTACATTAGTGT	NA	False	NA	14	True	ATTAAA	-26	NA	26499215	26499694	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_26499200_26499700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053700	chr17	+	795	4	NNC	ENSMUSG00000015575.16	novel	823	4	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	381	junction_3	528.401993435553	1173	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTCCAGTGTTTAAAA	NA	False	NA	37	True	AATAAA	-25	NA	26895355	26918621	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_26895553_26901651_26901700_26914328_26914443_26918185
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053708	chr17	+	774	4	NNC	ENSMUSG00000015575.16	novel	823	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	707.958096688403	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTCCAGTGTTTAAAA	NA	False	NA	37	True	AATAAA	-25	NA	26895385	26918621	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_26895553_26901651_26901700_26914328_26914459_26918192
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053716	chr17	+	765	4	NNC	ENSMUSG00000015575.16	novel	823	4	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	633.395786394433	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTCCAGTGTTTAAAA	NA	False	NA	37	True	AATAAA	-25	NA	26895388	26918621	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_26895540_26901651_26901700_26914328_26914459_26918185
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053718	chr17	+	881	5	NIC	ENSMUSG00000015575.16	novel	823	4	NA	NA	3	0	combination_of_known_junctions	TRUE	canonical	3	20	junction_3	660.503737688138	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTCCAGTGTTTAAAA	NA	False	NA	37	True	AATAAA	-25	NA	26895388	26918621	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_26895553_26901651_26901700_26913452_26913556_26914328_26914459_26918185
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053721	chr17	+	730	3	NIC	ENSMUSG00000015575.16	novel	823	4	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	562	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTCCAGTGTTTAAAA	NA	False	NA	37	True	AATAAA	-25	NA	26895388	26918621	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_26895553_26914328_26914459_26918185
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053722	chr17	+	648	3	NIC	ENSMUSG00000015575.16	novel	823	4	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	758.5	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTCCAGTGTTTAAAA	NA	False	NA	37	True	AATAAA	-25	NA	26895388	26918621	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_26895553_26901651_26901700_26918185
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053735	chr17	+	862	4	NNC	ENSMUSG00000015575.16	novel	494	4	NA	NA	366	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_1	625.676345156894	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTCCAGTGTTTAAAA	NA	False	NA	37	True	AATAAA	-25	NA	26895751	26918621	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_26896016_26901651_26901700_26914328_26914443_26918185
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053739	chr17	+	426	1	ISM	ENSMUSG00000015575.16	ENSMUST00000236867.2	772	4	23065	0	22810	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTCCAGTGTTTAAAA	1060	False	NA	37	True	AATAAA	-25	NA	26918195	26918621	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_26918200_26918600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053744	chr17	+	531	1	NIC	ENSMUSG00000048249.15	novel	7462	9	NA	NA	-251	304	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAGTAGCTTTCTTTTA	8837	False	NA	NA	False	NA	NA	NA	26961706	26962237	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_26961700_26962200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053751	chr17	+	287	1	ISM	ENSMUSG00000024191.16	ENSMUST00000015725.16	1098	6	11169	0	1460	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTGGTAAATGCTTAAC	NA	False	NA	15	True	AATAAA	-15	NA	27011208	27011495	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_27011200_27011500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053764	chr17	-	723	6	ISM	ENSMUSG00000024194.17	ENSMUST00000025027.10	741	7	101	-1	-4	1	intron_retention	FALSE	canonical	3	511	junction_5	169.834507683215	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTCTCTGTGACATGG	9353	False	NA	-16	True	AATAAA	-19	NA	27158442	27156944	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158290
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053765	chr17	-	962	5	ISM	ENSMUSG00000024194.17	ENSMUST00000114935.9	662	6	60	-2	-19	1	intron_retention	FALSE	canonical	3	797	junction_3	67.913547985656	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTCTCTGTGACATGG	9338	False	NA	-16	True	AATAAA	-19	NA	27158457	27156944	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053781	chr17	-	821	5	FSM	ENSMUSG00000024194.17	ENSMUST00000237609.2	785	5	-35	-1	6	0	multi-exon	FALSE	canonical	3	511	junction_4	189.078026221981	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9363	False	NA	-17	True	AATAAA	-18	NA	27158432	27156945	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_27157151_27157391_27157442_27157545_27157761_27157857_27158067_27158290
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053790	chr17	-	707	5	NIC	ENSMUSG00000024194.17	novel	741	7	NA	NA	-19	0	intron_retention	FALSE	canonical	3	227	junction_4	300.390579079971	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9338	False	NA	-17	True	AATAAA	-18	NA	27158457	27156945	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_27157151_27157391_27157592_27157700_27157761_27157857_27158067_27158424
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053791	chr17	-	664	6	NNC	ENSMUSG00000024194.17	novel	741	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_4	353.031216750021	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9272	False	NA	-17	True	AATAAA	-18	NA	27158523	27156945	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157756_27157857_27158067_27158424
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053799	chr17	-	756	7	NIC	ENSMUSG00000024194.17	novel	741	7	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	370.133947225716	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9340	False	NA	-17	True	AATAAA	-18	NA	27158455	27156945	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158170_27158290_27158343_27158424
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053800	chr17	-	812	5	NIC	ENSMUSG00000024194.17	novel	741	7	NA	NA	-6	0	intron_retention	FALSE	canonical	3	511	junction_4	182.656781970996	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9367	False	NA	-17	True	AATAAA	-18	NA	27158428	27156945	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_27157151_27157391_27157592_27157700_27157761_27157857_27158067_27158290
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053814	chr17	-	705	5	NNC	ENSMUSG00000024194.17	novel	741	7	NA	NA	-17	0	intron_retention	FALSE	canonical	3	117	junction_3	378.765346223754	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9340	False	NA	-17	True	AATAAA	-18	NA	27158455	27156945	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_27157151_27157391_27157442_27157545_27157756_27157857_27158067_27158424
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053871	chr17	-	206	1	NIC	ENSMUSG00000024194.17	novel	740	4	NA	NA	981	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	NA	False	NA	-17	True	AATAAA	-18	NA	27157151	27156945	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_27156900_27157200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053894	chr17	-	2004	6	FSM	ENSMUSG00000057789.15	ENSMUST00000078691.12	2387	6	383	0	-39	0	multi-exon	TRUE	canonical	3	126	junction_3	5.45527267879434	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGCCTGGCATCTTTACA	NA	False	NA	0	True	AATAAA	-20	NA	27247600	27238783	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_27240010_27240140_27240322_27241412_27241557_27241715_27241852_27244766_27244868_27247384
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053898	chr17	-	1231	1	NIC	ENSMUSG00000057789.15	novel	2387	6	NA	NA	7538	0	mono-exon	FALSE	NA	NA	NA	NA	NA	670	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGCCTGGCATCTTTACA	5057	False	NA	0	True	AATAAA	-20	NA	27240014	27238783	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_27238800_27240000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053917	chr17	-	490	4	NNC	ENSMUSG00000024208.17	novel	500	4	NA	NA	0	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	1369.72560106841	113	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGTTTGGAACTCATT	1947	False	NA	-1	True	AATAAA	-21	NA	27352890	27341639	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_27341815_27344120_27344191_27344857_27344926_27352713
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053929	chr17	-	452	4	NNC	ENSMUSG00000024208.17	novel	500	4	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1294.26916314446	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCTGGTTTGGAACTCA	1976	False	NA	-3	True	AATAAA	-19	NA	27352861	27341641	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_27341815_27344120_27344177_27344857_27344933_27352713
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053937	chr17	-	749	1	ISM	ENSMUSG00000044857.9	ENSMUST00000236082.2	2808	7	10123	0	3132	0	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTTATTTGTGGTGC	NA	False	NA	-1	True	AATAAA	-19	NA	27409322	27408573	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_27408600_27409300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053953	chr17	-	2161	2	FSM	ENSMUSG00000117916.2	ENSMUST00000235429.2	2149	2	-6	-6	-6	6	multi-exon	TRUE	canonical	3	72	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGACTTGGGTTTTTTTG	6243	False	NA	-3	True	NA	NA	NA	27461639	27454042	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_27456112_27461547
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053976	chr17	+	1672	5	FSM	ENSMUSG00000046711.17	ENSMUST00000232265.2	1681	5	9	0	1	0	multi-exon	FALSE	canonical	3	3635	junction_2	873.596123789477	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAAGGAGCATTCA	NA	False	NA	NA	False	AATAAA	-27	NA	27775556	27782648	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_27775686_27778506_27778678_27779901_27779986_27780434_27780486_27781411
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000053993	chr17	+	1596	5	FSM	ENSMUSG00000046711.17	ENSMUST00000117254.9	916	5	-40	-640	8	0	multi-exon	FALSE	canonical	3	289	junction_4	2003.13017550033	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAAGGAGCATTCA	NA	False	NA	NA	False	AATAAA	-27	NA	27775596	27782648	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_27775686_27778506_27778645_27779901_27779986_27780434_27780486_27781414
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054023	chr17	+	1365	2	ISM	ENSMUSG00000046711.17	ENSMUST00000118570.2	1898	5	4713	-8	4686	1	3prime_fragment	FALSE	canonical	3	5240	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGTGTAAGGAGCAT	NA	False	NA	NA	False	AATAAA	-24	NA	27780354	27782645	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_27780486_27781411
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054028	chr17	-	668	5	FSM	ENSMUSG00000062753.15	ENSMUST00000154473.9	862	5	4	190	-3	6	multi-exon	FALSE	canonical	3	219	junction_4	17.0934929139717	348	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGGGTGGACTCCATT	NA	False	NA	55	True	AATAAA	-24	NA	27784726	27782736	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_27782991_27783122_27783229_27783358_27783385_27783535_27783725_27784633
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054089	chr17	-	446	5	NNC	ENSMUSG00000052146.17	novel	887	6	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2357.90122513646	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTTGTGTATGTTCTGT	NA	False	NA	NA	False	AATAAA	-18	NA	27854219	27849393	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_27849481_27850173_27850224_27853100_27853218_27853299_27853450_27854177
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054090	chr17	-	579	6	NNC	ENSMUSG00000052146.17	novel	887	6	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2408.53180174147	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTTGTGTATGTTCTGT	NA	False	NA	NA	False	AATAAA	-18	NA	27854219	27849393	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_27849481_27850173_27850224_27851252_27851331_27853045_27853218_27853299_27853450_27854177
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054093	chr17	-	554	6	NNC	ENSMUSG00000052146.17	novel	887	6	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2268.66078557373	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTTGTGTATGTTCTGT	NA	False	NA	NA	False	AATAAA	-18	NA	27854218	27849393	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_27849481_27850173_27850230_27851252_27851331_27853075_27853218_27853299_27853450_27854177
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054109	chr17	-	598	6	NNC	ENSMUSG00000052146.17	novel	887	6	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	2377.01252836412	133	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTTGTGTATGTTCTGT	NA	False	NA	NA	False	AATAAA	-18	NA	27854250	27849393	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_27849481_27850173_27850230_27851252_27851331_27853045_27853218_27853317_27853450_27854177
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054112	chr17	-	576	6	NNC	ENSMUSG00000052146.17	novel	887	6	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2788.14105812457	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTTGTGTATGTTCTGT	NA	False	NA	NA	False	AATAAA	-18	NA	27854215	27849393	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_27849481_27850173_27850230_27851259_27851331_27853045_27853218_27853297_27853450_27854177
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054157	chr17	-	575	6	NNC	ENSMUSG00000052146.17	novel	887	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2583.64649284688	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCACTTGTGTATGTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	27854215	27849395	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_27849481_27850173_27850230_27851252_27851325_27853045_27853218_27853297_27853450_27854177
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054182	chr17	+	171	1	Intergenic	novelGene_168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTAAAAAAAAATCTGAAT	NA	False	NA	NA	False	NA	NA	NA	27879665	27879836	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_+_27879700_27879800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054184	chr17	+	185	1	Intergenic	novelGene_169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGTCTGTGTAGCCC	NA	False	NA	NA	False	NA	NA	NA	27893583	27893768	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_+_27893600_27893800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054204	chr17	+	762	6	NNC	ENSMUSG00000024217.11	novel	984	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	810.279852890346	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGTCCCTGTCCCTTGCA	NA	False	NA	21	True	AATAAA	-23	NA	28059053	28070942	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_28059144_28059437_28059481_28061243_28061353_28064156_28064241_28066926_28067032_28070611
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054226	chr17	+	687	5	ISM	ENSMUSG00000024217.11	ENSMUST00000233657.2	882	6	300	-5	300	0	3prime_fragment	FALSE	canonical	3	1970	junction_3	64.5460107210353	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGTCCCTGTCCCTTGCA	NA	False	NA	21	True	AATAAA	-23	NA	28059428	28070942	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_28059481_28061243_28061353_28064156_28064247_28066926_28067032_28070611
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054239	chr17	-	423	1	NIC	ENSMUSG00000062859.16	novel	1989	10	NA	NA	1307	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGCCATTCTTCTTTGAT	NA	False	NA	-1	True	AATAAA	-18	NA	28286143	28285720	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_28285700_28286100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054252	chr17	+	159	1	Genic_Genomic	ENSMUSG00000007570.17	novel	NA	NA	NA	NA	7960	1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTGGCTCAGCCCTGT	NA	False	NA	18	True	AATAAA	-20	NA	28545388	28545547	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr17_+_28545400_28545500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054286	chr17	+	1124	4	NIC	ENSMUSG00000037805.16	novel	949	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	5482	junction_2	1331.5841025719	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_28547593_28547784_28548497_28549498_28549672_28549803
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054291	chr17	+	1040	5	NIC	ENSMUSG00000037805.16	novel	729	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	233	junction_1	3454.7359070557	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_28547593_28547787_28547860_28547940_28548497_28549498_28549672_28549803
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054293	chr17	+	712	6	NNC	ENSMUSG00000037805.16	novel	830	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3325.42969253599	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_28547593_28547784_28547860_28547940_28548022_28548347_28548497_28549503_28549672_28549803
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054294	chr17	+	875	5	NIC	ENSMUSG00000037805.16	novel	949	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	3461.09708040673	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_28547593_28547940_28548255_28548347_28548497_28549498_28549672_28549803
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054297	chr17	+	561	4	NIC	ENSMUSG00000037805.16	novel	729	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	247	junction_1	3378.79238782142	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_28547593_28548347_28548497_28549498_28549672_28549803
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054299	chr17	+	954	6	NNC	ENSMUSG00000037805.16	novel	949	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_4	3751.54954652074	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_28547593_28547784_28547860_28547940_28548255_28548347_28548501_28549498_28549672_28549803
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054300	chr17	+	1952	5	NIC	ENSMUSG00000037805.16	novel	949	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	728	junction_3	3251.84442855128	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_28547593_28547784_28547860_28547940_28548255_28548347_28549672_28549803
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054301	chr17	+	798	5	NIC	ENSMUSG00000037805.16	novel	830	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	5482	junction_3	1374.50982171827	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_28547593_28547784_28548022_28548347_28548497_28549498_28549672_28549803
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054305	chr17	+	1031	5	NIC	ENSMUSG00000037805.16	novel	949	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	728	junction_2	2767.37776378651	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_28547593_28547784_28548255_28548347_28548497_28549498_28549672_28549803
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054309	chr17	+	722	6	NNC	ENSMUSG00000037805.16	novel	830	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3148.35038710751	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTGCCTGTGATTG	NA	False	NA	1	True	AATAAA	-20	NA	28547556	28550007	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_28547593_28547784_28547860_28547940_28548022_28548347_28548497_28549498_28549676_28549803
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054310	chr17	+	1047	5	NNC	ENSMUSG00000037805.16	novel	949	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	3209.36180377034	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_28547593_28547784_28547860_28547940_28548497_28549498_28549676_28549803
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054313	chr17	+	733	6	NNC	ENSMUSG00000037805.16	novel	830	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	3045.3788335772	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_28547593_28547784_28547860_28547924_28548022_28548347_28548497_28549498_28549672_28549803
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054338	chr17	+	1235	4	FSM	ENSMUSG00000037805.16	ENSMUST00000232770.2	1202	4	-33	0	0	0	multi-exon	FALSE	canonical	3	5482	junction_2	1519.39724891155	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_28547860_28547940_28548497_28549498_28549672_28549803
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054339	chr17	+	910	5	FSM	ENSMUSG00000037805.16	ENSMUST00000152665.3	901	5	-3	-6	0	0	multi-exon	FALSE	canonical	3	5482	junction_3	1346.05653205948	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTGCCTGTGATTG	NA	False	NA	1	True	AATAAA	-20	NA	28547556	28550007	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_28547860_28547940_28548022_28548347_28548497_28549498_28549672_28549803
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054344	chr17	+	1316	3	NIC	ENSMUSG00000037805.16	novel	1202	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	5482	junction_1	1467	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_28548497_28549498_28549672_28549803
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054346	chr17	+	2318	2	FSM	ENSMUSG00000037805.16	ENSMUST00000141049.2	1618	2	-695	-5	0	0	multi-exon	FALSE	canonical	3	8416	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_28549672_28549803
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054392	chr17	-	500	4	NNC	ENSMUSG00000024225.6	novel	611	3	NA	NA	-8044	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	1.63299316185545	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCGTCTCTGCCTGTCCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	28787784	28777186	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_28777415_28777734_28777858_28779544_28779662_28787752
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054423	chr17	+	627	3	Antisense	novelGene_ENSMUSG00000117255.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	28	junction_2	31.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCCACACAGATGGAAAAGT	NA	False	NA	NA	False	NA	NA	NA	29004405	29019414	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr17_+_29004515_29016706_29016757_29018946
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054432	chr17	-	1018	3	FSM	ENSMUSG00000045378.6	ENSMUST00000051526.6	1019	3	1	0	1	0	multi-exon	FALSE	canonical	3	18	junction_2	5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTCTGTGTGTCTCTTTT	6214	False	NA	2	True	AATAAA	-18	NA	29161237	29152957	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_29153781_29160215_29160344_29161170
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054448	chr17	-	1712	1	ISM	ENSMUSG00000024006.18	ENSMUST00000009138.13	3351	14	35404	0	486	0	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTGGATTTCTTTTAT	NA	False	NA	2	True	AATAAA	-21	NA	29191565	29189853	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_29189900_29191600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054487	chr17	+	1289	5	NNC	ENSMUSG00000071172.14	novel	2618	6	NA	NA	0	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	886.431469432353	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTTTAACTTGAAAGC	NA	False	NA	24	True	ATTAAA	-15	NA	29251646	29261071	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_29251761_29255214_29255423_29257463_29257634_29260180_29260264_29260357
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054488	chr17	+	1366	7	NNC	ENSMUSG00000071172.14	novel	2594	7	NA	NA	0	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	905.190035296456	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTTTAACTTGAAAGC	NA	False	NA	24	True	ATTAAA	-15	NA	29251646	29261071	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_29251761_29255214_29255423_29257463_29257599_29258814_29258884_29259748_29259788_29260180_29260268_29260357
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054494	chr17	+	1089	5	NIC	ENSMUSG00000071172.14	novel	2618	6	NA	NA	0	-13	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	859.41346277563	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTTTAACTTGAAAGC	NA	False	NA	24	True	ATTAAA	-15	NA	29251646	29261071	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_29251761_29257463_29257599_29259748_29259788_29260180_29260268_29260357
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054519	chr17	+	1198	3	FSM	ENSMUSG00000117007.2	ENSMUST00000233006.2	1125	3	-63	-10	-63	0	multi-exon	FALSE	canonical	1	3	junction_1	3.5	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGCAGACTGGTAAGCAAA	1546	False	NA	NA	False	NA	NA	NA	29275770	29278729	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_29275960_29276834_29276933_29277818
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054536	chr17	+	2416	2	ISM	ENSMUSG00000023067.15	ENSMUST00000023829.8	1913	3	3	0	3	0	intron_retention	FALSE	canonical	3	1306	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTCTTGTCATTAGA	4650	False	NA	24	True	NA	NA	NA	29312745	29319696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_29312836_29317370
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054537	chr17	+	1861	3	NNC	ENSMUSG00000023067.15	novel	1913	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	546	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTCTTGTCATTAGA	4650	False	NA	24	True	NA	NA	NA	29312745	29319696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_29312836_29317419_29317812_29318317
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054551	chr17	+	192	1	Intergenic	novelGene_170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTACACCGTAGCTGTCT	5008	False	NA	NA	False	NA	NA	NA	29332113	29332305	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_+_29332100_29332300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054558	chr17	-	418	1	FSM	ENSMUSG00000067575.6	ENSMUST00000147311.2	333	1	-62	-23	-62	23	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTAGATTTGTAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-23	NA	29356340	29355922	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_29355900_29356300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054571	chr17	+	433	1	Intergenic	novelGene_171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTCTCTAAGTCGACAG	2147	False	NA	NA	False	NA	NA	NA	29383899	29384332	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_+_29383900_29384300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054623	chr17	-	1051	6	ISM	ENSMUSG00000024012.19	ENSMUST00000127423.3	1267	9	1733	-8	1650	0	3prime_fragment	FALSE	canonical	3	643	junction_4	214.212044479296	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGCAAGCCTCTTAT	NA	False	NA	-9	True	AATAAA	-21	NA	29557777	29551049	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555191_29555286_29557715
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054629	chr17	+	203	1	Intergenic	novelGene_172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTGCCTCTGCCTCCC	NA	False	NA	NA	False	NA	NA	NA	29572939	29573142	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_+_29572900_29573100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054635	chr17	+	1745	3	ISM	ENSMUSG00000024014.9	ENSMUST00000024811.9	2698	6	1233	1	-210	-1	3prime_fragment	FALSE	canonical	3	1677	junction_1	101	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGAGTTTTCCATTCAT	NA	False	NA	16	True	AATAAA	-17	NA	29710959	29715085	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_29711006_29712695_29712873_29713563
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054654	chr17	+	499	1	Intergenic	novelGene_173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATTTATGTATATGGT	NA	False	NA	NA	False	AATAAA	-28	NA	29803285	29803784	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_+_29803300_29803800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054666	chr17	+	546	4	ISM	ENSMUSG00000024019.19	ENSMUST00000235031.2	1271	10	11	14152	4	96	5prime_fragment	FALSE	canonical	3	432	junction_2	6.53197264742181	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTTCGATCAGGAGCTG	NA	False	NA	NA	False	NA	NA	NA	29879598	29895216	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054668	chr17	+	1641	6	ISM	ENSMUSG00000024019.19	ENSMUST00000024816.13	6380	24	38041	2618	-24	2	3prime_fragment	TRUE	canonical	3	393	junction_1	28.3224292743402	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCTCTGTGCTGGGCTG	NA	False	NA	18	True	ATTAAA	-18	NA	29917609	29922335	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054675	chr17	+	522	1	ISM	ENSMUSG00000024019.19	ENSMUST00000024816.13	6380	24	42245	2618	3159	2	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCTCTGTGCTGGGCTG	NA	False	NA	18	True	ATTAAA	-18	NA	29921813	29922335	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_29921800_29922300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054697	chr17	+	265	1	ISM	ENSMUSG00000044477.13	ENSMUST00000226208.3	3039	6	203422	1603	10579	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGCTAGTGGATTTACA	NA	False	NA	22	True	ATTAAA	-23	NA	30427128	30427393	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_30427100_30427400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054703	chr17	-	230	1	ISM	ENSMUSG00000062202.15	ENSMUST00000168787.8	7058	11	358723	2012	74567	5	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGTGTTTCATTCCTAG	NA	False	NA	NA	False	ATTAAA	-23	NA	30436739	30436509	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_30436500_30436700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054753	chr17	-	463	3	FSM	ENSMUSG00000024026.14	ENSMUST00000237343.2	896	3	-53	486	-10	96	multi-exon	FALSE	canonical	3	3068	junction_1	272.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTTATAATCAATTAATT	NA	False	NA	NA	False	AATAAA	-25	NA	30831596	30818928	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_30819154_30822993_30823077_30831441
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054763	chr17	-	1022	3	NNC	ENSMUSG00000099474.2	novel	845	4	NA	NA	-869	3	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_2	123	277	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTCCTCTGAGATGACA	NA	False	NA	2	True	AATAAA	-28	NA	30846748	30841411	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_30841669_30845755_30846170_30846397
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054773	chr17	-	1003	3	ISM	ENSMUSG00000099474.2	ENSMUST00000188852.2	845	4	1688	2	1688	-2	3prime_fragment	FALSE	canonical	3	280	junction_2	76	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAATTCTTTCCTCTGAGA	NA	False	NA	-3	True	AATAAA	-23	NA	30844191	30841416	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_30841669_30843173_30843588_30843854
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054802	chr17	-	1011	8	FSM	ENSMUSG00000024033.11	ENSMUST00000235144.2	1026	8	21	-6	21	0	multi-exon	FALSE	canonical	3	5	junction_7	21.3101489666213	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTCTGATGTCGCTTC	NA	False	NA	-1	True	AATAAA	-26	NA	31496291	31473992	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_31474194_31477071_31477201_31477761_31477922_31480728_31480801_31484787_31484924_31485316_31485408_31492290_31492397_31496175
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054805	chr17	+	1368	2	Antisense	novelGene_ENSMUSG00000024033.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	33	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTTGTAGTTGACCTTC	6042	False	NA	10	True	AATAAA	-21	NA	31477086	31478653	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr17_+_31477258_31477456
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054810	chr17	-	274	1	Intergenic	novelGene_174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCGGGCAAAGGTGATA	5893	False	NA	NA	False	NA	NA	NA	31506395	31506121	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_-_31506100_31506400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054824	chr17	-	1938	11	FSM	ENSMUSG00000024037.14	ENSMUST00000171171.9	4154	11	432	1784	-10	16	multi-exon	FALSE	canonical	3	400	junction_7	39.3020355706928	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCAGCCTCCATAGCTGA	NA	False	NA	-1	True	AATAAA	-33	NA	31731293	31715079	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728742_31728887_31729551_31729621_31731140
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054849	chr17	-	730	2	Genic_Genomic	ENSMUSG00000117818.2	novel	2711	1	NA	NA	-7310	1	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGCTGTTCTGTCTGCTG	NA	False	NA	-1	True	NA	NA	NA	31778541	31768519	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr17_-_31769026_31778317
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054938	chr17	+	216	1	Intergenic	novelGene_175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTTAAAAAAGTGATAT	NA	False	NA	NA	False	NA	NA	NA	31950512	31950728	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_+_31950500_31950700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054969	chr17	-	1587	8	NNC	ENSMUSG00000002076.13	novel	3115	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	408.835628863938	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTTAGGAAGTGGT	NA	False	NA	-13	True	AATAAA	-30	NA	32253511	32165055	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253414
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054974	chr17	-	1572	8	NIC	ENSMUSG00000002076.13	novel	3115	9	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_7	406.321627908388	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTTAGGAAGTGGT	NA	False	NA	-13	True	AATAAA	-30	NA	32255351	32165055	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32255269
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054975	chr17	-	1466	7	NNC	ENSMUSG00000002076.13	novel	1479	7	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	489.532912297245	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTTAGGAAGTGGT	NA	False	NA	-13	True	AATAAA	-30	NA	32253494	32165055	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_32165786_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253414
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000054976	chr17	-	1331	6	NIC	ENSMUSG00000002076.13	novel	1479	7	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	97	junction_3	514.177634675022	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTTAGGAAGTGGT	NA	False	NA	-13	True	AATAAA	-30	NA	32253513	32165055	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_32165786_32226649_32226768_32230149_32230283_32241739_32241844_32252234_32252386_32253418
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055007	chr17	+	1920	1	ISM	ENSMUSG00000058392.14	ENSMUST00000081339.13	4874	16	24846	0	1778	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTTTGATGTTGCCTC	NA	False	NA	22	True	ATTAAA	-24	NA	32279919	32281839	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_32279900_32281800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055031	chr17	-	342	1	ISM	ENSMUSG00000002625.11	ENSMUST00000236039.2	3513	13	28810	0	11134	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32540739	32540397	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_32540400_32540700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055062	chr17	+	620	1	ISM	ENSMUSG00000048440.17	ENSMUST00000169591.8	2242	13	14620	1	4806	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATGTCTTGGTTCCAT	NA	False	NA	20	True	NA	NA	NA	32770151	32770771	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_32770200_32770800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055068	chr17	-	3060	4	FSM	ENSMUSG00000024298.16	ENSMUST00000159086.10	10851	4	33	7758	-4	-2	multi-exon	FALSE	canonical	3	18	junction_3	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTGTTGTATATCATG	NA	False	NA	NA	False	AATAAA	-43	NA	33007228	32992227	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_32994983_32996130_32996192_32996374_32996502_33007111
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055098	chr17	-	686	1	Genic_Genomic	ENSMUSG00000024295.10	novel	NA	NA	NA	NA	912	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGTGTGCTTGCAGAATT	NA	False	NA	NA	False	NA	NA	NA	33170619	33169933	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr17_-_33169900_33170600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055103	chr17	+	2368	4	FSM	ENSMUSG00000053600.9	ENSMUST00000039132.9	2376	4	-11	19	-11	-19	multi-exon	FALSE	canonical	3	72	junction_1	5.18544972870135	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAATAAATTCCTTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	33184776	33198188	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_33184904_33194887_33195015_33195200_33195259_33196132
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055106	chr17	+	184	1	Intergenic	novelGene_176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTGGACAATGCTACA	NA	False	NA	NA	False	NA	NA	NA	33211013	33211197	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_+_33211000_33211200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055166	chr17	+	1572	5	FSM	ENSMUSG00000073423.11	ENSMUST00000172455.3	1544	5	-2	-26	-2	0	multi-exon	FALSE	canonical	3	354	junction_1	35.2233942146409	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTACCTATGCCTTC	4926	False	NA	29	True	AATACA	-19	NA	33848072	33850690	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_33848191_33848770_33849054_33849340_33849449_33849549_33850438_33850515
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055197	chr17	-	2331	15	NNC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	666.657210817294	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTGCCTTTTTTGTTT	5767	False	NA	-5	True	AATAAA	-16	NA	33904366	33865209	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885595_33885660_33887958_33888053_33889050_33889108_33896247_33896415_33904240
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055216	chr17	-	2319	15	NNC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	663.597631344877	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTGCCTTTTTTGTTT	5756	False	NA	-5	True	AATAAA	-16	NA	33904377	33865209	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885620_33885660_33887958_33888053_33889048_33889108_33896247_33896415_33904240
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055243	chr17	+	183	1	ISM	ENSMUSG00000090952.3	ENSMUST00000170103.3	925	2	1684	12	1684	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAATTTACCTCTCT	5161	False	NA	7	True	NA	NA	NA	33980649	33980832	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_33980600_33980800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055281	chr17	-	323	4	NNC	ENSMUSG00000067288.14	novel	392	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7060.40897461959	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTCCAGCAGCGTC	NA	False	NA	-11	True	AATAAA	-28	NA	34043470	34042009	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_34042091_34042166_34042298_34043272_34043321_34043407
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055282	chr17	-	338	4	NNC	ENSMUSG00000067288.14	novel	392	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7060.40897461959	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTCCAGCAGCGTC	NA	False	NA	-11	True	AATAAA	-28	NA	34043474	34042009	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_34042091_34042166_34042305_34043268_34043321_34043407
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055284	chr17	-	321	4	NNC	ENSMUSG00000067288.14	novel	392	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7060.40897461959	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTCCAGCAGCGTC	NA	False	NA	-11	True	AATAAA	-28	NA	34043471	34042009	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_34042091_34042166_34042305_34043282_34043321_34043407
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055314	chr17	-	306	4	NNC	ENSMUSG00000067288.14	novel	382	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9015.43679844003	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTCTAGAAATTGGTT	NA	False	NA	-25	True	AATAAA	-14	NA	34043470	34042023	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_34042091_34042166_34042305_34043272_34043311_34043407
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055315	chr17	-	295	4	NNC	ENSMUSG00000067288.14	novel	382	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9015.43679844003	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTCTAGAAATTGGTT	NA	False	NA	-25	True	AATAAA	-14	NA	34043469	34042023	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_34042091_34042166_34042305_34043272_34043301_34043407
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055317	chr17	-	304	4	NNC	ENSMUSG00000067288.14	novel	392	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7148.62505816484	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTCTAGAAATTGGTT	NA	False	NA	-25	True	AATAAA	-14	NA	34043469	34042023	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_34042091_34042170_34042298_34043272_34043321_34043407
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055320	chr17	-	321	4	NNC	ENSMUSG00000067288.14	novel	382	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9015.43679844003	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTCTAGAAATTGGTT	NA	False	NA	-25	True	AATAAA	-14	NA	34043470	34042023	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_34042091_34042166_34042305_34043272_34043311_34043392
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055333	chr17	-	316	4	NNC	ENSMUSG00000067288.14	novel	392	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9511.41925383495	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTCTAGAAATTGGTT	NA	False	NA	-25	True	AATAAA	-14	NA	34043469	34042023	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_34042091_34042170_34042305_34043272_34043311_34043392
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055344	chr17	-	478	2	FSM	ENSMUSG00000067288.14	ENSMUST00000173879.8	342	2	-149	13	-1	0	multi-exon	FALSE	canonical	3	22076	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTCTAGAAATTGGTT	NA	False	NA	-25	True	AATAAA	-14	NA	34043469	34042023	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_34042305_34043272
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055347	chr17	-	1360	2	FSM	ENSMUSG00000067288.14	ENSMUST00000174788.2	812	2	-12	-536	-2	0	multi-exon	FALSE	canonical	3	16929	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTCTAGAAATTGGTT	NA	False	NA	-25	True	AATAAA	-14	NA	34043470	34042023	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_34043321_34043407
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055355	chr17	+	560	4	FSM	ENSMUSG00000041881.14	ENSMUST00000048249.8	528	4	-26	-6	-26	6	multi-exon	FALSE	canonical	3	7458	junction_2	513.174650798558	10132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTAGTATTTATCGATT	4048	False	NA	39	True	AATATA	-30	NA	34043519	34057297	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_34043655_34044574_34044625_34048640_34048791_34057072
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055370	chr17	+	506	4	NNC	ENSMUSG00000041881.14	novel	528	4	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_1	3791.74445341455	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTTTTCTTAGTATTT	4091	False	NA	32	True	AATATA	-23	NA	34043562	34057290	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_34043655_34044578_34044625_34048640_34048791_34057072
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055388	chr17	+	573	4	NNC	ENSMUSG00000041881.14	novel	528	4	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_2	3940.96522299917	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTTTTCTTAGTATTT	4095	False	NA	32	True	AATATA	-23	NA	34043566	34057290	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_34043655_34044574_34044692_34048640_34048791_34057072
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055389	chr17	+	349	3	NIC	ENSMUSG00000041881.14	novel	528	4	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	53	junction_2	4014	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAATCTGTCTTTTCTT	4095	False	NA	25	True	AATATA	-16	NA	34043566	34057283	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_34043655_34044574_34044625_34057072
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055395	chr17	+	510	4	NNC	ENSMUSG00000041881.14	novel	528	4	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3846.39857529092	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTTTTCTTAGTATTT	4095	False	NA	32	True	AATATA	-23	NA	34043566	34057290	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_34043659_34044574_34044625_34048640_34048791_34057072
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055429	chr17	+	564	3	NIC	ENSMUSG00000041881.14	novel	438	3	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	20	junction_1	4347.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAATCTGTCTTTTCTT	4117	False	NA	25	True	AATATA	-16	NA	34043588	34057283	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_34043792_34048640_34048791_34057072
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055441	chr17	+	247	1	NIC	ENSMUSG00000041881.14	novel	528	4	NA	NA	-21	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTTCTCTTGAACTT	5102	False	NA	11	True	NA	NA	NA	34044573	34044820	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_34044600_34044800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055445	chr17	+	220	1	NIC	ENSMUSG00000041881.14	novel	528	4	NA	NA	8704	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTTTTCTTAGTATTT	1999	False	NA	32	True	AATATA	-23	NA	34057070	34057290	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_34057100_34057300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055470	chr17	+	1204	5	FSM	ENSMUSG00000002308.17	ENSMUST00000087559.8	1191	5	-11	-2	-11	0	multi-exon	FALSE	canonical	3	6	junction_1	143.673240375513	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCTAGCCTGTTT	7317	False	NA	23	True	ATTAAA	-16	NA	34062388	34067727	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_34062606_34064989_34065116_34066468_34066700_34066990_34067153_34067259
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055485	chr17	+	989	4	NNC	ENSMUSG00000092349.2	novel	807	3	NA	NA	-11943	5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	55.6496980125579	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGACTTAAATTTCTT	NA	False	NA	18	True	NA	NA	NA	34112165	34125654	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_34112309_34122590_34122685_34124501_34124892_34125292
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055496	chr17	+	604	1	Intergenic	novelGene_177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGAGAGAGAGGGAGA	NA	False	NA	NA	False	NA	NA	NA	34112190	34112794	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_+_34112200_34112800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055528	chr17	+	746	1	ISM	ENSMUSG00000051390.11	ENSMUST00000053429.11	2612	2	2409	0	2409	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCCCAACACCCCT	251	False	NA	11	True	ATTAAA	-20	NA	34137553	34138299	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_34137600_34138300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055536	chr17	+	479	1	ISM	ENSMUSG00000041354.17	ENSMUST00000047503.16	3252	18	7627	0	1821	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	2980	False	NA	12	True	AATAAA	-18	NA	34156182	34156661	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_34156200_34156700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055610	chr17	-	717	6	FSM	ENSMUSG00000008668.16	ENSMUST00000234380.2	715	6	-2	0	-2	0	multi-exon	FALSE	canonical	1	30	junction_3	10301.0144238322	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	34174639	34170972	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_34171093_34171194_34171287_34171376_34171566_34172713_34172883_34174051_34174151_34174591
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055611	chr17	-	640	4	FSM	ENSMUSG00000008668.16	ENSMUST00000174175.8	632	4	-7	-1	-4	0	multi-exon	FALSE	canonical	3	20050	junction_3	1274.65978031613	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	34174641	34170972	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_34171093_34171194_34171566_34174051_34174151_34174591
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055614	chr17	-	558	5	NNC	ENSMUSG00000008668.16	novel	560	5	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9383.71425662568	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	34174643	34170972	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_34171093_34171194_34171287_34171376_34171566_34174045_34174151_34174591
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055617	chr17	-	1077	3	ISM	ENSMUSG00000008668.16	ENSMUST00000174175.8	632	4	-3	-1	0	0	intron_retention	FALSE	canonical	3	21077	junction_1	1020	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	34174637	34170972	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_34171093_34171194_34171566_34174051
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055618	chr17	-	447	4	NIC	ENSMUSG00000008668.16	novel	715	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	10513.9338129086	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	34174637	34170972	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_34171093_34171194_34171287_34171376_34171566_34174591
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055648	chr17	-	650	4	NNC	ENSMUSG00000008668.16	novel	715	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	10251.3125338498	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	34174637	34170972	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_34171287_34171374_34171566_34174051_34174151_34174591
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055654	chr17	-	740	3	NIC	ENSMUSG00000008668.16	novel	560	5	NA	NA	-2	0	intron_retention	FALSE	canonical	3	20050	junction_2	1533.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	34174639	34170972	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_34171566_34174051_34174151_34174591
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055662	chr17	-	527	5	NNC	ENSMUSG00000008668.16	novel	560	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9383.71425662568	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTCCGTCTCAGTTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	34174635	34170975	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_34171093_34171194_34171287_34171376_34171552_34174051_34174151_34174591
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055663	chr17	-	539	5	NNC	ENSMUSG00000008668.16	novel	527	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9338.29794448646	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTCCGTCTCAGTTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	34174636	34170975	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_34171093_34171194_34171268_34171360_34171566_34174051_34174151_34174591
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055680	chr17	-	1597	8	FSM	ENSMUSG00000061232.17	ENSMUST00000025181.18	1619	8	63	-41	-1	5	multi-exon	FALSE	canonical	3	30	junction_6	28.3196045170126	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGTGTATCTGTTGGG	NA	False	NA	1	True	AATAAA	-37	NA	34219258	34214985	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_34215478_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055681	chr17	-	1608	7	NNC	ENSMUSG00000061232.17	novel	1619	8	NA	NA	-1	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	24.862399097611	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGTGTATCTGTTGGG	NA	False	NA	1	True	AATAAA	-37	NA	34219258	34214985	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_34215478_34215589_34215629_34215967_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055708	chr17	-	534	2	FSM	ENSMUSG00000073422.12	ENSMUST00000173616.8	534	2	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	-1	True	AATAAA	-23	NA	34245732	34245006	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_34245445_34245636
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055716	chr17	-	1671	7	NIC	ENSMUSG00000024327.17	novel	1550	8	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	218.983763984659	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCTTTGTCTTTATGT	NA	False	NA	-3	True	AATAAA	-25	NA	34250670	34247243	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34250521
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055717	chr17	-	2395	7	FSM	ENSMUSG00000024327.17	ENSMUST00000025186.16	2320	7	-76	1	-14	-1	multi-exon	FALSE	canonical	3	543	junction_6	39.6512575112344	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCTTTGTCTTTATGT	NA	False	NA	-3	True	AATAAA	-25	NA	34250670	34247243	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055735	chr17	-	350	1	ISM	ENSMUSG00000024335.21	ENSMUST00000114242.9	4483	13	9375	0	1360	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTTTTCTTAGTGAGAT	NA	False	NA	-9	True	AATAAA	-23	NA	34331346	34330996	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_34331000_34331300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055797	chr17	+	1135	5	FSM	ENSMUSG00000060586.12	ENSMUST00000235501.2	782	5	-105	-248	-105	1	multi-exon	FALSE	canonical	3	177	junction_1	12.5896783120142	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTTCATAGAGTTTCAA	NA	False	NA	13	True	AATAAA	-17	NA	34528443	34535174	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_34528835_34533143_34533426_34534016_34534128_34534529_34534554_34534847
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055808	chr17	+	331	1	ISM	ENSMUSG00000060586.12	ENSMUST00000235530.2	1669	6	10477	0	6769	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTGTCAATTAGAGTAT	NA	False	NA	NA	False	AATAAA	-16	NA	34535317	34535648	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_34535300_34535600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055863	chr17	-	826	1	NIC	ENSMUSG00000015474.17	novel	1710	9	NA	NA	9440	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGCTTGGCTTATTCCC	2977	False	NA	-1	True	AATAAA	-16	NA	34836462	34835636	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_34835600_34836500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055874	chr17	+	608	1	Genic_Genomic	ENSMUSG00000033739.9	novel	NA	NA	NA	NA	879	3	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTGTGTTGTGGAA	8315	False	NA	7	True	ATTAAA	-20	NA	34864693	34865301	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr17_+_34864700_34865300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055923	chr17	-	1387	8	ISM	ENSMUSG00000040356.17	ENSMUST00000174887.8	3995	27	8686	-5	-378	0	3prime_fragment	FALSE	canonical	3	113	junction_5	13.3278900453607	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTGGAGTATGGTAACT	5717	False	NA	-23	True	AATAAA	-13	NA	35060482	35058219	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055939	chr17	+	266	1	ISM	ENSMUSG00000024369.17	ENSMUST00000165953.3	1381	11	5699	0	1851	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTATTGTAACTGCTTT	5346	False	NA	NA	False	AAAAAG	-13	NA	35075082	35075348	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_35075100_35075300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055941	chr17	-	728	4	FSM	ENSMUSG00000024371.15	ENSMUST00000174279.2	535	4	-187	-6	-187	3	multi-exon	FALSE	canonical	3	8	junction_2	0.942809041582063	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGGGTGTTGACATCAT	4586	False	NA	NA	False	AATAAA	-15	NA	35117428	35112322	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_35112451_35112586_35112677_35114382_35114544_35117079
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055962	chr17	+	477	1	ISM	ENSMUSG00000007038.6	ENSMUST00000173269.2	3619	5	4162	1	3613	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGATTCGGGCTGCGTT	NA	False	NA	NA	False	NA	NA	NA	35154451	35154928	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_35154500_35154900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055993	chr17	-	431	3	NNC	ENSMUSG00000092203.8	novel	579	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTTTTTCTGTGTCACT	6010	False	NA	NA	False	AATAAA	-22	NA	35171444	35169210	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_35169452_35170860_35170902_35171295
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055996	chr17	-	825	2	ISM	ENSMUSG00000092203.8	ENSMUST00000173070.8	434	4	3	-6	0	3	intron_retention	FALSE	canonical	3	38	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTTTTTCTGTGTCACT	6010	False	NA	NA	False	AATAAA	-22	NA	35171444	35169210	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_35169452_35170860
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055997	chr17	-	583	4	NNC	ENSMUSG00000092203.8	novel	579	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.8888096369862	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTTTTTCTGTGTCACT	6010	False	NA	NA	False	AATAAA	-22	NA	35171444	35169210	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_35169452_35169673_35169824_35170860_35170902_35171293
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000055999	chr17	-	414	3	NNC	ENSMUSG00000092203.8	novel	579	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTTTTTCTGTGTCACT	6010	False	NA	NA	False	AATAAA	-22	NA	35171444	35169210	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_35169452_35170860_35170902_35171312
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056004	chr17	-	417	3	NNC	ENSMUSG00000092203.8	novel	579	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTTTTTCTGTGTCACT	6010	False	NA	NA	False	AATAAA	-22	NA	35171444	35169210	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_35169452_35171090_35171150_35171327
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056006	chr17	-	591	5	NNC	ENSMUSG00000092203.8	novel	579	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.6924779809339	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTTTTTCTGTGTCACT	6010	False	NA	NA	False	AATAAA	-22	NA	35171444	35169210	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_35169452_35169669_35169824_35170860_35170902_35171111_35171150_35171327
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056007	chr17	-	508	3	NIC	ENSMUSG00000092203.8	novel	579	5	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	95	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTTTTTCTGTGTCACT	6010	False	NA	NA	False	AATAAA	-22	NA	35171444	35169210	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_35169452_35169673_35169824_35171327
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056013	chr17	-	550	4	NIC	ENSMUSG00000092203.8	novel	579	5	NA	NA	-1	3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	76.6072233321811	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTTTTTCTGTGTCACT	6009	False	NA	NA	False	AATAAA	-22	NA	35171445	35169210	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_35169452_35169673_35169824_35170860_35170902_35171327
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056053	chr17	-	1846	3	FSM	ENSMUSG00000093009.3_ENSMUSG00000092203.8	ENSMUST00000174173.2	635	3	0	-1211	0	3	multi-exon	FALSE	canonical	3	94	junction_2	10.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTTTTTCTGTGTCACT	6010	False	NA	NA	False	AATAAA	-22	NA	35171444	35169210	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_35170902_35171111_35171150_35171327
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056056	chr17	-	2234	1	FSM	ENSMUSG00000093009.3	ENSMUST00000175268.3	66	1	-1451	-717	-1451	717	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTTTTTCTGTGTCACT	6010	False	NA	NA	False	AATAAA	-22	NA	35171444	35169210	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_35169200_35171400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056070	chr17	-	583	4	NNC	ENSMUSG00000092203.8	novel	579	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.8888096369862	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAATAGACTTTTTCTGT	6010	False	NA	NA	False	AATAAA	-16	NA	35171444	35169216	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_35169452_35169673_35169824_35170860_35170942_35171327
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056073	chr17	-	487	5	NNC	ENSMUSG00000092203.8	novel	579	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	67.765680842149	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAATAGACTTTTTCTGT	6010	False	NA	NA	False	AATAAA	-16	NA	35171444	35169216	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_35169452_35169673_35169824_35170860_35170902_35171111_35171150_35171421
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056120	chr17	+	869	5	FSM	ENSMUSG00000007050.18	ENSMUST00000114011.11	840	5	-29	0	-11	0	multi-exon	FALSE	canonical	3	1192	junction_1	217.150869213089	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGTTTGTCGTCTGCT	72	False	NA	26	True	AATAAA	-20	NA	35200826	35204867	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_35201062_35201595_35201664_35204084_35204116_35204224_35204285_35204392
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056133	chr17	+	899	5	FSM	ENSMUSG00000007050.18	ENSMUST00000007266.14	873	5	-26	0	-18	0	multi-exon	FALSE	canonical	3	278	junction_1	596.250995806296	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGTTTGTCGTCTGCT	217	False	NA	26	True	AATAAA	-20	NA	35201078	35204867	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_35201344_35201595_35201664_35204084_35204116_35204224_35204285_35204392
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056148	chr17	+	840	4	NNC	ENSMUSG00000007050.18	novel	873	5	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	774.394100069352	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGTTTGTCGTCTGCT	276	False	NA	26	True	AATAAA	-20	NA	35201137	35204867	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_35201344_35201595_35201695_35204224_35204285_35204392
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056159	chr17	-	2900	3	Intergenic	novelGene_178	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	153.5	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTGTTTCTTTTATCA	NA	False	NA	-16	True	NA	NA	NA	35219831	35215699	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_-_35218446_35219142_35219185_35219719
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056204	chr17	+	1201	6	NNC	ENSMUSG00000007041.10	novel	1466	6	NA	NA	237	-22	at_least_one_novel_splicesite	TRUE	canonical	3	11	junction_5	445.967980913428	88	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTGTTGTTTTTACACA	1913	False	NA	NA	False	AATAAA	-19	NA	35269178	35277703	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_35269463_35271410_35271521_35271756_35271883_35272008_35272116_35274202_35274379_35277305
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056238	chr17	+	1299	7	FSM	ENSMUSG00000007039.13	ENSMUST00000174493.8	1254	7	-44	-1	22	1	multi-exon	FALSE	canonical	3	26	junction_6	164.014989152415	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGACTGGTTTCTCGA	NA	False	NA	18	True	AATAAA	-24	NA	35278032	35281072	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280576_35280766
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056334	chr17	-	237	1	Genic_Genomic	ENSMUSG00000024387.14	novel	NA	NA	NA	NA	1641	1	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTCCTACTGTGTGTT	NA	False	NA	-6	True	AATAAA	-18	NA	35335407	35335170	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr17_-_35335200_35335400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056338	chr17	-	910	7	NNC	ENSMUSG00000024387.14	novel	961	7	NA	NA	46	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	341.237331877195	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTCTCCTACTGTGT	NA	False	NA	-9	True	AATAAA	-15	NA	35340216	35335173	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_35335402_35336671_35336853_35336967_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340097
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056343	chr17	-	1001	7	NIC	ENSMUSG00000024387.14	novel	961	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_6	341.766326928535	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTCTCCTACTGTGT	NA	False	NA	-9	True	AATAAA	-15	NA	35340974	35335173	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340769
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056366	chr17	+	514	5	ISM	ENSMUSG00000024392.18	ENSMUST00000173550.8	3536	24	9974	13	-170	1	3prime_fragment	FALSE	canonical	3	160	junction_4	295.610385473853	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	5714	False	NA	17	True	AATAAA	-18	NA	35364693	35366283	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056379	chr17	-	415	4	FSM	ENSMUSG00000073412.7	ENSMUST00000097336.5	415	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1.24721912892465	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGCTTCTCTATATGTGT	NA	False	NA	NA	False	AGTAAA	-22	NA	35407415	35404070	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_35404287_35405560_35405581_35405921_35406018_35407332
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056391	chr17	-	558	1	ISM	ENSMUSG00000042419.9	ENSMUST00000048994.7	1447	4	15060	0	925	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGAGTCTCCTCTGTTT	NA	False	NA	-1	True	NA	NA	NA	35439708	35439150	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_35439200_35439700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056405	chr17	+	1716	11	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	11	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	714.925093978383	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTGTCTGTAAGTGC	NA	False	NA	21	True	AATGAA	-10	NA	35460732	35472667	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470359_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056418	chr17	+	1657	11	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	-5	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	698.222571963983	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCGTGTCTGTGGTGTCT	NA	False	NA	13	True	AATGAA	-2	NA	35460775	35472659	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472335_35472456
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056456	chr17	+	1578	5	NIC	ENSMUSG00000091705.9	novel	1150	5	NA	NA	914	0	combination_of_known_splicesites	TRUE	canonical	1	3	junction_4	2.23606797749979	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTTGTTTCTGTT	5794	False	NA	NA	False	NA	NA	NA	35562131	35565738	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_35562365_35563730_35564007_35564133_35564251_35564429_35564463_35564819
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056517	chr17	+	493	1	Genic_Genomic	ENSMUSG00000024406.17	novel	NA	NA	NA	NA	1467	8	mono-exon	FALSE	NA	NA	NA	NA	NA	459	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCCTTCAGTTCC	7306	False	NA	8	True	AATAAA	-28	NA	35821184	35821677	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr17_+_35821200_35821700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056537	chr17	-	175	1	Intergenic	novelGene_179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTTTATCAGATAAACT	869	False	NA	NA	False	NA	NA	NA	35935099	35934924	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_-_35934900_35935100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056543	chr17	-	1687	14	FSM	ENSMUSG00000001524.15	ENSMUST00000001565.15	1679	14	-6	-2	-6	2	multi-exon	FALSE	canonical	3	142	junction_8	17.8418429806661	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGCTTCAGACGTCTGCC	NA	False	NA	1	True	AATAAA	-19	NA	35984637	35978619	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35980654_35980839_35980924_35981081_35981151_35981256_35981369_35981548_35981638_35981757_35981855_35982117_35982250_35982884_35982990_35983577_35983721_35984447
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056553	chr17	+	1125	2	FSM	ENSMUSG00000003541.7	ENSMUST00000003635.7	1131	2	0	6	0	-6	multi-exon	FALSE	canonical	3	7	junction_1	0	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCAGTTCTCGAAGTGTA	NA	False	NA	10	True	AATAAA	-23	NA	36132575	36133809	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_36132821_36132929
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056568	chr17	+	270	1	Genic_Genomic	ENSMUSG00000059714.14	novel	NA	NA	NA	NA	1888	4	mono-exon	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTTTCCTCACTCAGA	240	False	NA	29	True	ATTAAA	-27	NA	36143417	36143687	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr17_+_36143400_36143700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056597	chr17	-	1690	4	NNC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	-15	800	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4503.03167013316	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCTTTCTCTTTCCAC	NA	False	NA	-32	True	NA	NA	NA	36149124	36145696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_36146927_36147050_36147166_36147519_36147629_36148888
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056604	chr17	-	1700	4	NNC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	-15	800	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	4495.08197923019	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCTTTCTCTTTCCAC	NA	False	NA	-32	True	NA	NA	NA	36149124	36145696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_36146932_36147045_36147166_36147519_36147629_36148888
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056605	chr17	-	2045	3	NIC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	-15	800	intron_retention	FALSE	canonical	3	8733	junction_1	720	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCTTTCTCTTTCCAC	NA	False	NA	-32	True	NA	NA	NA	36149124	36145696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_36146932_36147054_36147629_36148888
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056606	chr17	-	1683	4	NNC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	-15	800	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4494.79721455818	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCTTTCTCTTTCCAC	NA	False	NA	-32	True	NA	NA	NA	36149124	36145696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_36146932_36147054_36147158_36147519_36147629_36148888
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056619	chr17	+	1033	4	NNC	ENSMUSG00000061607.16	novel	422	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	66.2872536767062	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9389	False	NA	15	True	NA	NA	NA	36152566	36170562	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_36152658_36155323_36155463_36156730_36156784_36169812
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056637	chr17	+	1085	3	NNC	ENSMUSG00000034595.18	novel	3524	3	NA	NA	1968	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	41	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGCCTTCCTTTGTTTC	NA	False	NA	15	True	AATAAA	-22	NA	36181262	36186488	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_36181334_36184617_36184832_36185688
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056658	chr17	+	1000	7	NNC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	420.268036165281	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTATGTCATTGCTT	7373	False	NA	52	True	AATGAA	-42	NA	36198818	36203562	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200484_36201806_36201981_36203310
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056659	chr17	+	1007	7	NNC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	414.99116456458	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTATGTCATTGCTT	7373	False	NA	52	True	AATGAA	-42	NA	36198818	36203562	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_36198890_36198975_36199095_36199246_36199319_36200095_36200253_36200330_36200493_36201806_36201981_36203310
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056660	chr17	+	1046	6	NIC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-9	4	intron_retention	FALSE	canonical	3	1011	junction_1	65.8221847100201	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCATGGGAACTCTGGAAC	7373	False	NA	11	True	AATAAA	-18	NA	36198818	36203521	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_36198890_36198975_36199095_36199246_36199315_36200089_36200493_36201806_36201981_36203310
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056661	chr17	+	928	7	NNC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	414.989725441754	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTATGTCATTGCTT	7373	False	NA	52	True	AATGAA	-42	NA	36198818	36203562	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_36198890_36198975_36199095_36199246_36199315_36200089_36200172_36200330_36200493_36201806_36201981_36203310
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056665	chr17	+	958	7	NNC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	118	junction_4	381.465012229897	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTATGTCATTGCTT	7373	False	NA	52	True	AATGAA	-42	NA	36198818	36203562	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200381_36200493_36201806_36201981_36203310
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056694	chr17	-	1204	6	FSM	ENSMUSG00000050705.16	ENSMUST00000148482.8	1193	6	-7	-4	-7	4	multi-exon	FALSE	canonical	3	95	junction_5	123.227269709265	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTCACGTCACTTTCTC	NA	False	NA	1	True	AATAAA	-23	NA	36208019	36203564	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36207871
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056705	chr17	-	1353	12	FSM	ENSMUSG00000024426.18	ENSMUST00000077494.13	1340	12	1	-14	0	0	multi-exon	TRUE	canonical	3	28	junction_5	34.4359508470988	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTTGTCATTATTCAAA	NA	False	NA	2	True	AATAAA	-38	NA	36220937	36208486	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_36208808_36209148_36209192_36209279_36209360_36212259_36212504_36212874_36212947_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056732	chr17	-	1092	7	NNC	ENSMUSG00000024436.17	novel	1079	7	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	490.033133800381	62	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTCCCTTTGGGCTG	4279	False	NA	-7	True	AATAAA	-20	NA	36227298	36221271	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_36221849_36222313_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587_36225697_36227183
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056736	chr17	-	1077	7	NNC	ENSMUSG00000024436.17	novel	1079	7	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	501.069744535518	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTCCCTTTGGGCTG	4285	False	NA	-7	True	AATAAA	-20	NA	36227292	36221271	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_36221849_36222310_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587_36225685_36227183
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056749	chr17	+	615	1	ISM	ENSMUSG00000039220.17	ENSMUST00000087211.9	4255	20	15103	0	5175	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGTATGTTTCACTTC	NA	False	NA	28	True	AATAAA	-28	NA	36242560	36243175	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_36242600_36243200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056759	chr17	-	777	1	Genic_Genomic	ENSMUSG00000038762.16	novel	NA	NA	NA	NA	598	5	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGGGGTGCTTCCTG	3764	False	NA	-7	True	AATAAA	-23	NA	36268482	36267705	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr17_-_36267700_36268500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056764	chr17	-	779	9	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	23	-296	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	305.391551946022	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAAACAGGTAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	36280630	36272888	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_36272977_36274015_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056806	chr17	-	1210	6	FSM	ENSMUSG00000073406.11	ENSMUST00000195838.6	1105	6	-26	-79	-26	5	multi-exon	FALSE	canonical	3	113	junction_5	180.752427369593	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTTTCCTGCATTGAGC	NA	False	NA	0	True	AATAAA	-27	NA	36395141	36391001	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394124_36394401_36394587_36394825_36395051
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056827	chr17	-	441	4	FSM	ENSMUSG00000024446.14	ENSMUST00000077535.5	437	4	-25	21	-25	1	multi-exon	FALSE	canonical	3	63	junction_3	333.755399456948	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTGGTATCTCAACTG	NA	False	NA	-15	True	AATAAA	-21	NA	36568773	36566557	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_36566691_36566835_36566962_36568333_36568417_36568674
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056833	chr17	-	685	3	ISM	ENSMUSG00000024446.14	ENSMUST00000173486.8	579	4	-25	0	-12	0	intron_retention	FALSE	canonical	3	770	junction_1	1	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTGGTATCTCAACT	NA	False	NA	-16	True	AATAAA	-20	NA	36568760	36566558	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_36566691_36566835_36566962_36568333
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056867	chr17	+	1821	1	ISM	ENSMUSG00000024457.17	ENSMUST00000130367.8	3187	10	20435	0	2944	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTGGTGCTGTCTCTT	NA	False	NA	31	True	AATAAA	-38	NA	37168469	37170290	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_37168500_37170300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056882	chr17	-	581	4	FSM	ENSMUSG00000036398.14	ENSMUST00000174711.8	520	4	-61	0	-61	0	multi-exon	FALSE	canonical	1	4	junction_3	334.250737554243	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTGCCTCCGTTCTCCT	NA	False	NA	-15	True	AATATA	-23	NA	37262694	37260181	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_37260447_37260768_37260878_37262314_37262401_37262573
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056904	chr17	-	229	2	NNC	ENSMUSG00000036315.14	novel	742	4	NA	NA	-18134	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGATGTTATGTGTGTT	NA	False	NA	-11	True	ACTAAA	-17	NA	37287585	37265247	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_37265445_37287553
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056922	chr17	+	556	1	ISM	ENSMUSG00000036214.15	ENSMUST00000209623.2	1218	3	1248	0	1248	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGCTAATGGTACCATG	4822	False	NA	20	True	AATAAA	-20	NA	37275961	37276517	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_37276000_37276500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000056931	chr17	-	908	4	NNC	ENSMUSG00000083534.2	novel	1034	5	NA	NA	754	1087	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	45.0653845971483	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTGGATTCTATTATTT	NA	False	NA	NA	False	NA	NA	NA	37281534	37278999	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_37279193_37280098_37280210_37280331_37280614_37281212
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057028	chr17	+	300	1	Intergenic	novelGene_180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTCTGTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	38578683	38578983	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_+_38578700_38579000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057064	chr17	+	104	1	Intergenic	novelGene_181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATTCTCTACAATCC	NA	False	NA	NA	False	AATAAA	-22	NA	43723333	43723437	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_+_43723300_43723400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057072	chr17	+	1604	3	ISM	ENSMUSG00000023960.14	ENSMUST00000024756.5	2534	4	37	3177	3	-3177	5prime_fragment	FALSE	canonical	3	19	junction_2	5.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGGCTGTTTCCTGA	NA	False	NA	8	True	AGTAAA	-26	NA	44389772	44394273	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_44389874_44391537_44392402_44393634
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057118	chr17	+	880	4	FSM	ENSMUSG00000037089.12	ENSMUST00000226086.2	850	4	-24	-6	-12	6	multi-exon	FALSE	canonical	3	37	junction_3	186.912338335976	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGCTCTAATGGATTTGC	NA	False	NA	13	True	AATAAA	-22	NA	45874861	45876987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45876589
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057145	chr17	-	2520	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	5	1	intron_retention	TRUE	canonical	0	0	junction_2	3270.0116223035	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCTCTCCTTGTAACA	NA	False	NA	-23	True	AATAAA	-20	NA	45884192	45878699	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_45879051_45879154_45879489_45879779_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057155	chr17	-	2525	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_6	3303.74860423731	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCTCTCCTTGTAACA	NA	False	NA	-23	True	AATAAA	-20	NA	45884197	45878699	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881587_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057211	chr17	-	517	1	ISM	ENSMUSG00000023942.16	ENSMUST00000163492.8	2216	12	6859	0	3025	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGCATCCTTCCAAG	NA	False	NA	-1	True	AATAAA	-18	NA	45896642	45896125	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_45896100_45896600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057213	chr17	-	1484	8	ISM	ENSMUSG00000023942.16	ENSMUST00000163492.8	2216	12	2937	0	473	0	3prime_fragment	FALSE	canonical	3	1453	junction_5	334.137146472913	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGCATCCTTCCAAG	NA	False	NA	-1	True	AATAAA	-18	NA	45900564	45896125	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057219	chr17	-	2101	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	1453	junction_5	311.5369990469	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGCATCCTTCCAAG	NA	False	NA	-1	True	AATAAA	-18	NA	45906505	45896125	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057235	chr17	-	915	2	FSM	ENSMUSG00000079471.5	ENSMUST00000169137.3	616	2	-10	-289	-6	6	multi-exon	FALSE	canonical	3	164	junction_1	0	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGCTTTTGTTTTTGA	NA	False	NA	1	True	AATAAA	-26	NA	45912902	45911890	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_45912612_45912708
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057245	chr17	-	768	2	NNC	ENSMUSG00000079471.5	novel	804	2	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGGTGGTGGCTTTTGT	NA	False	NA	-5	True	AATAAA	-20	NA	45912847	45911896	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_45912606_45912788
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057303	chr17	+	724	2	FSM	ENSMUSG00000023939.8	ENSMUST00000148537.2	510	2	-119	-95	-119	0	multi-exon	FALSE	canonical	3	1100	junction_1	0	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGAGCTGTGATCG	NA	False	NA	37	True	AATAAA	-26	NA	46006222	46009421	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_46006499_46008973
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057311	chr17	+	452	1	NIC	ENSMUSG00000023939.8	novel	645	3	NA	NA	2628	0	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGAGCTGTGATCG	NA	False	NA	37	True	AATAAA	-26	NA	46008969	46009421	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_46009000_46009400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057343	chr17	+	926	6	FSM	ENSMUSG00000023967.10	ENSMUST00000024763.10	884	6	-21	-21	-21	21	multi-exon	FALSE	canonical	3	1040	junction_5	46.4732180938656	2680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGGCCTGTGCATAGTA	NA	False	NA	40	True	AATAAA	-40	NA	46421890	46439857	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_46422056_46428865_46428898_46433649_46433758_46436215_46436340_46436568_46436639_46439430
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057364	chr17	+	721	6	NNC	ENSMUSG00000023967.10	novel	884	6	NA	NA	8	19	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	442.573564506512	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTAGTTTTTAAAGTAAAA	NA	False	NA	NA	False	NA	NA	NA	46421929	46438668	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_46422056_46428865_46428898_46433649_46433758_46436215_46436340_46436568_46436639_46438407
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057382	chr17	-	1274	3	FSM	ENSMUSG00000034509.10	ENSMUST00000171172.3	1272	3	0	-2	0	2	multi-exon	FALSE	canonical	3	95	junction_1	3.5	243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGATTTAGACTTTTGG	NA	False	NA	0	True	AATAAA	-23	NA	46464479	46458310	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_46459211_46463704_46463968_46464368
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057397	chr17	+	1369	1	ISM	ENSMUSG00000067150.7	ENSMUST00000087031.7	5081	32	39448	0	12361	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCCCTATTTTCCTTT	NA	False	NA	14	True	AGTAAA	-16	NA	46553155	46554524	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_46553200_46554500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057416	chr17	-	1342	8	NIC	ENSMUSG00000067148.16	novel	1314	9	NA	NA	-18	-7	intron_retention	TRUE	canonical	3	702	junction_7	54.3368180511002	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCAGGCTTTTTTTTTTT	NA	False	NA	-5	True	AATAAA	-18	NA	46558912	46554852	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_46555147_46555231_46555602_46555724_46555878_46555956_46556077_46556541_46556675_46557032_46557141_46558654_46558727_46558820
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057535	chr17	+	1026	7	FSM	ENSMUSG00000002767.14	ENSMUST00000113429.8	998	7	-20	-8	1	0	multi-exon	FALSE	canonical	3	97	junction_4	389.469903273097	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTTTTCACTTGGGAGG	NA	False	NA	35	True	AATAAA	-24	NA	46957155	46961065	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959595_46959696_46959960_46960035_46960809
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057541	chr17	+	1028	7	NNC	ENSMUSG00000002767.14	novel	1031	7	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	420.832277226398	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTACTACCTTTTCACT	NA	False	NA	28	True	AATAAA	-17	NA	46957159	46961058	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959584_46959696_46959960_46960037_46960809
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057561	chr17	+	1265	6	ISM	ENSMUSG00000038545.14	ENSMUST00000133393.8	4047	21	8878	0	-16	0	3prime_fragment	TRUE	canonical	3	81	junction_1	10.2293694820355	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGTATGGGACTGCTA	NA	False	NA	19	True	AATAAA	-20	NA	46972696	46975290	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_46972779_46972850_46973158_46973983_46974130_46974247_46974375_46974463_46974670_46974893
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057569	chr17	-	1495	7	FSM	ENSMUSG00000023971.10	ENSMUST00000233136.2	1289	7	34	-240	-31	237	multi-exon	FALSE	canonical	3	390	junction_2	28.055995596109	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCGGCCTGTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	46985244	46978146	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057576	chr17	-	1121	6	NIC	ENSMUSG00000023971.10	novel	1289	7	NA	NA	-19	17	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	165.05514230099	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	46985232	46978366	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46985122
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057589	chr17	-	595	1	ISM	ENSMUSG00000063576.13	ENSMUST00000071841.7	2100	12	5760	0	5222	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCCTATTTCTGGCGAC	NA	False	NA	0	True	TATAAA	-17	NA	46986070	46985475	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_46985500_46986100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057591	chr17	-	1957	11	FSM	ENSMUSG00000063576.13	ENSMUST00000165007.9	1954	11	0	-3	0	0	multi-exon	FALSE	canonical	3	47	junction_10	118.520082686438	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCCTATTTCTGGCGAC	NA	False	NA	0	True	TATAAA	-17	NA	46991840	46985475	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46991627
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057632	chr17	+	326	1	ISM	ENSMUSG00000002768.9	ENSMUST00000002845.8	859	4	1660	2	1392	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGCCTGTGCTCCTGAAT	NA	False	NA	3	True	AATAAA	-28	NA	46993709	46994035	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_46993700_46994000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057634	chr17	-	1146	1	Genic_Genomic	ENSMUSG00000059409.10	novel	NA	NA	NA	NA	1197	7	mono-exon	FALSE	NA	NA	NA	NA	NA	623	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGCCTTGGTGTGAAAGGG	NA	False	NA	NA	False	AATAAA	-22	NA	46995055	46993909	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr17_-_46993900_46995100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057681	chr17	-	2022	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	3	-591	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	827.181895890432	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCGTGTGAGTACATG	NA	False	NA	-3	True	AGTAAA	-16	NA	47093595	47085423	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092812_47093544
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057688	chr17	-	640	1	NIC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	6899	-1192	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTGTATACCTTTAGT	NA	False	NA	-1	True	NA	NA	NA	47086664	47086024	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_47086000_47086700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057693	chr17	-	1416	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	1	-1193	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	831.397100601685	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTGTATACCTTTAG	NA	False	NA	-2	True	NA	NA	NA	47093581	47086025	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_47086663_47088977_47089198_47089331_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057695	chr17	-	1440	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	0	-1193	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	847.611873966433	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTGTATACCTTTAG	NA	False	NA	-2	True	NA	NA	NA	47093598	47086025	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_47086663_47088966_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057814	chr17	+	482	1	NIC	ENSMUSG00000034729.17	novel	1018	7	NA	NA	2729	0	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	125	False	NA	7	True	NA	NA	NA	47689124	47689606	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_47689100_47689600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057828	chr17	-	569	2	ISM	ENSMUSG00000023982.9	ENSMUST00000059348.9	873	4	5171	0	5171	0	3prime_fragment	FALSE	canonical	3	65	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGAGTCTCAGCTTTTTT	7007	False	NA	0	True	NA	NA	NA	47706338	47705482	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_47705746_47706032
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057829	chr17	-	568	3	NNC	ENSMUSG00000023982.9	novel	873	4	NA	NA	4836	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	29	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGAGTCTCAGCTTTTTT	6672	False	NA	0	True	NA	NA	NA	47706673	47705482	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_47705746_47706032_47706127_47706462
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057833	chr17	-	264	1	NIC	ENSMUSG00000023982.9	novel	873	4	NA	NA	5763	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGAGTCTCAGCTTTTTT	7599	False	NA	0	True	NA	NA	NA	47705746	47705482	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_47705500_47705700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057835	chr17	+	519	1	Intergenic	novelGene_182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTAGCTGTGGATGGCC	NA	False	NA	NA	False	AATAAA	-40	NA	47722207	47722726	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_+_47722200_47722700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057840	chr17	+	1415	2	ISM	ENSMUSG00000034382.15	ENSMUST00000150819.3	4866	5	31503	494	31503	0	3prime_fragment	FALSE	canonical	3	11	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTTTGTGTGTTGTGT	NA	False	NA	33	True	AATATA	-23	NA	47779232	47781069	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_47779779_47780200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057844	chr17	+	697	1	NIC	ENSMUSG00000034382.15	novel	1410	5	NA	NA	32643	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTTTGTGTGTTGTGT	NA	False	NA	33	True	AATATA	-23	NA	47780372	47781069	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_47780400_47781100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057855	chr17	-	2536	9	FSM	ENSMUSG00000023980.8	ENSMUST00000067103.4	2784	9	1	247	1	-15	multi-exon	FALSE	canonical	3	80	junction_1	52.1152568831815	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGTAAATGACTCAGACA	NA	False	NA	-19	True	AATAAA	-16	NA	47813216	47799221	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_47800822_47801067_47801208_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057861	chr17	-	216	1	ISM	ENSMUSG00000023980.8	ENSMUST00000233274.2	1692	7	9025	385	9008	-385	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTACTATTCTGGTAGC	7735	False	NA	-9	True	AATAAA	-16	NA	47804189	47803973	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_47804000_47804200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057887	chr17	+	1455	4	NNC	ENSMUSG00000034165.17	novel	336	3	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	3	143	junction_1	1892.45349275014	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTCTTGTGATCCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	47908025	47910614	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_47908103_47908344_47908505_47908927_47909065_47909533
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057895	chr17	+	1500	3	ISM	ENSMUSG00000034165.17	ENSMUST00000182539.8	931	4	1230	-595	134	0	3prime_fragment	FALSE	canonical	3	4157	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTCTTGTGATCCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	47908222	47910614	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_47908505_47908927_47909065_47909533
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057915	chr17	+	1896	4	NNC	ENSMUSG00000092558.4	novel	2054	4	NA	NA	-3	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	116.659999809513	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGGCCTTCTGGTCTGT	NA	False	NA	13	True	AATAAA	-18	NA	47922503	47935178	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_47922618_47923887_47924047_47929733_47929988_47933809
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057920	chr17	+	861	4	NNC	ENSMUSG00000023984.18	novel	2168	4	NA	NA	-4	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.5912222898061	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTATTGTCCAGAACTCA	NA	False	NA	NA	False	AATAAA	-19	NA	47922509	47961221	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_47922615_47923887_47924043_47929733_47929988_47960874
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057925	chr17	+	610	3	FSM	ENSMUSG00000023984.18	ENSMUST00000146105.8	599	3	-4	-7	-4	7	multi-exon	FALSE	canonical	3	27	junction_2	122	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTATTGTCCAGAACTCA	NA	False	NA	NA	False	AATAAA	-19	NA	47922509	47961221	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_47922618_47923887_47924043_47960874
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057932	chr17	+	1879	4	NNC	ENSMUSG00000092558.4	novel	2054	4	NA	NA	4	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	116.659999809513	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTTGGCCTTCTGGTCT	NA	False	NA	11	True	AATAAA	-16	NA	47922513	47935176	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_47922618_47923887_47924047_47929738_47929988_47933809
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057935	chr17	+	1108	5	NNC	ENSMUSG00000023984.18	novel	2168	4	NA	NA	-4	7	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	100.807675799018	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTATTGTCCAGAACTCA	NA	False	NA	NA	False	AATAAA	-19	NA	47922518	47961221	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_47922618_47923887_47924043_47929733_47929988_47933809_47934063_47960874
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057939	chr17	+	1865	4	NNC	ENSMUSG00000092558.4	novel	2054	4	NA	NA	11	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	100.880567449281	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTTGGCCTTCTGGTCT	NA	False	NA	11	True	AATAAA	-16	NA	47922520	47935176	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_47922615_47923887_47924043_47929738_47929988_47933809
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000057960	chr17	+	392	1	NIC	ENSMUSG00000023984.18	novel	4807	9	NA	NA	69067	-2790	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTTTTGTCAGTTGCTT	NA	False	NA	21	True	TATAAA	-18	NA	47991604	47991996	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_47991600_47992000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058019	chr17	+	690	5	NNC	ENSMUSG00000023987.15	novel	1388	9	NA	NA	3930	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	172.283741252621	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGTTGAGTCATTTG	NA	False	NA	17	True	AATAAA	-17	NA	48041698	48045408	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_48041724_48043313_48043430_48043885_48044037_48044681_48044781_48045109
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058068	chr17	+	358	1	ISM	ENSMUSG00000023990.19	ENSMUST00000086932.10	2342	9	55032	0	2621	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTCCTGGCTCTGCGGT	NA	False	NA	18	True	AGTAAA	-18	NA	48102986	48103344	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_48103000_48103300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058078	chr17	-	1341	4	ISM	ENSMUSG00000023991.17	ENSMUST00000113263.8	3156	17	53107	0	7660	0	3prime_fragment	FALSE	canonical	3	136	junction_3	14.290634073484	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTTGGCTTTTTCTT	NA	False	NA	-3	True	NA	NA	NA	48182218	48178688	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058164	chr17	-	1848	1	Genic_Genomic	ENSMUSG00000010592.10	novel	NA	NA	NA	NA	2082	1	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGACTTACTGTCCTGT	NA	False	NA	-2	True	AATAAA	-19	NA	50588269	50586421	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr17_-_50586400_50588300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058165	chr17	-	2944	11	FSM	ENSMUSG00000010592.10	ENSMUST00000010736.9	2976	11	35	-3	-2	1	multi-exon	FALSE	canonical	3	352	junction_4	74.6324996231534	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGACTTACTGTCCTGT	NA	False	NA	-2	True	AATAAA	-19	NA	50600629	50586421	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_50588340_50590155_50590255_50591265_50591380_50592023_50592075_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058184	chr17	+	369	1	ISM	ENSMUSG00000000708.15	ENSMUST00000000724.15	4653	18	105381	0	12957	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGTTATGTTTTAT	NA	False	NA	19	True	AATATA	-45	NA	53979379	53979748	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_53979400_53979700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058192	chr17	-	2177	8	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	-3	-1268	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	157.427275078925	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATGTGTGTATGTATG	NA	False	NA	-3	True	AATAAA	-24	NA	53996309	53983081	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53996238
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058199	chr17	-	213	1	Intergenic	novelGene_183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTCTTGGTTCCTTCC	NA	False	NA	1	True	NA	NA	NA	54004881	54004668	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_-_54004700_54004900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058215	chr17	-	562	5	FSM	ENSMUSG00000024174.10	ENSMUST00000233301.2	1813	5	-2	1253	-2	-1253	multi-exon	FALSE	canonical	3	16	junction_3	2.54950975679639	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTCAGGCATCAATTAT	NA	False	NA	NA	False	ATTAAA	-23	NA	56019630	56005346	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_56005588_56006991_56007107_56013105_56013153_56017838_56017907_56019539
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058235	chr17	-	1621	1	Genic_Genomic	ENSMUSG00000062101.13	novel	NA	NA	NA	NA	5268	10	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTGTCATTATTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	56246991	56245370	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr17_-_56245400_56247000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058237	chr17	-	1924	4	FSM	ENSMUSG00000062101.13	ENSMUST00000056147.14	1889	4	-25	-10	-25	10	multi-exon	FALSE	canonical	3	31	junction_3	5.90668171555645	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTGTCATTATTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	56252284	56245370	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_56246994_56247928_56247990_56248185_56248313_56252171
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058262	chr17	+	1785	13	FSM	ENSMUSG00000011589.10	ENSMUST00000011733.9	1748	13	-34	-3	-32	3	multi-exon	FALSE	canonical	3	52	junction_12	6.07533721057706	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCACTGGTTCTTGAG	3899	False	NA	9	True	AATAAA	-19	NA	56293476	56303884	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_56293654_56294742_56294839_56295123_56295256_56295673_56295776_56297211_56297235_56297418_56297541_56298166_56298377_56300842_56300942_56302356_56302517_56302857_56302938_56303071_56303324_56303420_56303510_56303641
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058272	chr17	-	971	7	ISM	ENSMUSG00000038781.8	ENSMUST00000043785.8	1509	13	5323	0	-1781	0	3prime_fragment	FALSE	canonical	3	15	junction_5	6.20931200339905	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGTGGCTGTAGGATT	NA	False	NA	-4	True	NA	NA	NA	56307261	56304076	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_56304362_56304459_56304535_56304604_56304698_56304777_56304952_56306742_56306809_56306912_56307016_56307086
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058283	chr17	+	149	1	NIC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	4571	9	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAAGCCTGTGGCTGGGG	NA	False	NA	18	True	AATAAA	-18	NA	56323513	56323662	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_56323500_56323700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058293	chr17	+	631	1	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	9660	-799	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTCTGTCTCAACTATC	1959	False	NA	27	True	TATAAA	-21	NA	56374402	56375033	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_56374400_56375000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058308	chr17	+	2260	16	FSM	ENSMUSG00000002833.12	ENSMUST00000226053.2	2270	16	27	-17	23	2	multi-exon	FALSE	canonical	3	507	junction_6	104.875926694356	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTGGCTTAGGTGCTG	NA	False	NA	NA	False	TATAAA	-27	NA	56386660	56407609	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058316	chr17	+	621	3	NNC	ENSMUSG00000002833.12	novel	594	4	NA	NA	194	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	444.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56406174	56407605	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_56406388_56406858_56407006_56407344
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058332	chr17	-	670	1	ISM	ENSMUSG00000019579.14	ENSMUST00000019723.8	1710	6	6983	524	6727	-524	mono-exon	FALSE	NA	NA	NA	NA	NA	624	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTATGCTCTCTCTGTGTG	NA	False	NA	1	True	AATGAA	-22	NA	56483937	56483267	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_56483300_56483900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058350	chr17	+	440	1	Antisense	novelGene_ENSMUSG00000019579.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTATTTGTCCTATTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	56490805	56491245	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr17_+_56490800_56491200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058363	chr17	-	1638	8	NNC	ENSMUSG00000024197.11	novel	3645	8	NA	NA	0	-2004	at_least_one_novel_splicesite	TRUE	canonical	3	37	junction_1	203.915148419881	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTAGTCTGTCATCCTGT	NA	False	NA	NA	False	AATGAA	-9	NA	56597511	56586479	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_56587071_56587741_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793_56594877_56597453
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058391	chr17	+	1035	7	ISM	ENSMUSG00000071054.13	ENSMUST00000182378.8	3628	14	5802	-14	602	0	3prime_fragment	FALSE	canonical	3	588	junction_4	28.0639151462039	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	NA	False	NA	35	True	AATAAA	-26	NA	56910571	56913294	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058413	chr17	-	521	4	NNC	ENSMUSG00000049760.7	novel	755	4	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	987.838493322106	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCGGTTTTCTGGTGG	NA	False	NA	-26	True	AATAAA	-17	NA	56916702	56914620	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_56914842_56915637_56915693_56915845_56916024_56916635
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058421	chr17	-	462	4	NNC	ENSMUSG00000049760.7	novel	755	4	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_3	978.884058507441	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCGGTTTTCTGGTGG	NA	False	NA	-26	True	AATAAA	-17	NA	56916702	56914620	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_56914842_56915637_56915693_56915845_56915969_56916639
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058423	chr17	-	540	4	NIC	ENSMUSG00000049760.7	novel	755	4	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	950.562757294623	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCGGTTTTCTGGTGG	NA	False	NA	-26	True	AATAAA	-17	NA	56916702	56914620	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_56914842_56915637_56915716_56915845_56916024_56916639
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058439	chr17	-	507	4	NNC	ENSMUSG00000049760.7	novel	755	4	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	987.838493322106	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCCGGTTTTCTGGTG	NA	False	NA	-27	True	AATAAA	-16	NA	56916702	56914621	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_56914842_56915637_56915693_56915845_56916011_56916635
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058456	chr17	+	424	4	NNC	ENSMUSG00000057863.7	novel	383	4	NA	NA	-33	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4075.78420538783	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTATGTGTGAGCTC	NA	False	NA	3	True	AATAAA	-16	NA	56920382	56921247	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_56920449_56920585_56920685_56920906_56921042_56921123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058466	chr17	+	617	3	NIC	ENSMUSG00000057863.7	novel	383	4	NA	NA	-3	5	intron_retention	FALSE	canonical	3	5436	junction_1	2267	321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTATGTGTGAGCTCA	NA	False	NA	4	True	AATAAA	-17	NA	56920412	56921248	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_56920449_56920585_56921042_56921123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058481	chr17	+	370	4	NNC	ENSMUSG00000057863.7	novel	383	4	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4584.99225735442	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTATGTGTGAGCT	NA	False	NA	2	True	AATAAA	-15	NA	56920415	56921246	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_56920449_56920585_56920681_56920906_56921026_56921123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058484	chr17	+	749	2	NIC	ENSMUSG00000057863.7	novel	383	4	NA	NA	0	3	intron_retention	FALSE	canonical	3	9970	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTATGTGTGAGCT	NA	False	NA	2	True	AATAAA	-15	NA	56920415	56921246	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_56921042_56921123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058496	chr17	-	374	1	Genic_Genomic	ENSMUSG00000041168.11	novel	NA	NA	NA	NA	12212	7	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTCTCAGTGTCGCC	NA	False	NA	-5	True	AATAAA	-24	NA	56921663	56921289	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr17_-_56921300_56921700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058501	chr17	-	301	2	NNC	ENSMUSG00000041168.11	novel	4362	16	NA	NA	12210	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	NA	False	NA	-12	True	AATAAA	-17	NA	56921665	56921296	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_56921564_56921631
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058505	chr17	+	734	3	ISM	ENSMUSG00000040828.11	ENSMUST00000233947.2	1617	12	10911	-2	10911	0	3prime_fragment	FALSE	canonical	3	13	junction_1	1.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATCAGGTTGCTAAGTGC	NA	False	NA	14	True	AATAAA	-15	NA	56969692	56971456	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_56969846_56970267_56970426_56971033
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058531	chr17	+	518	4	NNC	ENSMUSG00000002379.8	novel	545	4	NA	NA	-2	14	at_least_one_novel_splicesite	FALSE	canonical	3	154	junction_2	1198.36249385012	171	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGCTGCATGAGATGGC	NA	False	NA	36	True	AATAAA	-36	NA	57024764	57029155	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_57024943_57028034_57028128_57028365_57028442_57028984
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058567	chr17	+	167	1	Genic_Genomic	ENSMUSG00000002379.8	novel	NA	NA	NA	NA	4187	10	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGCTTGCTGCATGAGA	4159	False	NA	32	True	AATAAA	-32	NA	57028984	57029151	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr17_+_57029000_57029200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058659	chr17	+	722	4	NNC	ENSMUSG00000002661.15	novel	917	4	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	224.156195542305	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGATCTTCAAATGACCGT	367	False	NA	9	True	AATAAA	-19	NA	57304338	57306142	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_57304549_57305388_57305563_57305670_57305796_57305929
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058664	chr17	+	758	4	NNC	ENSMUSG00000002661.15	novel	917	4	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	216.348997892038	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGATCTTCAAATGACCGT	367	False	NA	9	True	AATAAA	-19	NA	57304338	57306142	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_57304568_57305388_57305563_57305670_57305796_57305912
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058667	chr17	+	697	4	NNC	ENSMUSG00000002661.15	novel	917	4	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_2	208.038992071732	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGATCTTCAAATGACCGT	367	False	NA	9	True	AATAAA	-19	NA	57304338	57306142	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_57304568_57305388_57305563_57305714_57305796_57305929
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058715	chr17	+	1128	4	ISM	ENSMUSG00000044279.16	ENSMUST00000071826.10	1194	5	3060	-7	-66	1	3prime_fragment	TRUE	canonical	3	14	junction_1	93.9657147876584	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGCTGTAAGCTCTTT	1460	False	NA	NA	False	AATAAA	-32	NA	57369164	57372919	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_57369229_57369594_57369767_57370636_57370699_57372089
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058719	chr17	+	1193	4	FSM	ENSMUSG00000044279.16	ENSMUST00000097299.10	1206	4	15	-2	15	2	multi-exon	FALSE	canonical	3	144	junction_1	33.4099120355355	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGCTGTAAGCTCTTTG	1541	False	NA	NA	False	AATAAA	-33	NA	57369245	57372920	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_57369374_57369594_57369767_57370636_57370699_57372089
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058738	chr17	-	172	1	ISM	ENSMUSG00000005823.10	ENSMUST00000233568.2	2405	17	12587	279	12578	30	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCGGAGCCCTGTGCT	NA	False	NA	-1	True	AAAAAG	-41	NA	57542085	57541913	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_57541900_57542100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058756	chr17	+	200	1	Intergenic	novelGene_184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACCTACTCCCCCATGT	NA	False	NA	NA	False	NA	NA	NA	57584819	57585019	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_+_57584800_57585000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058761	chr17	-	1168	3	ISM	ENSMUSG00000023965.14	ENSMUST00000169134.2	2063	6	226607	529	226607	-529	3prime_fragment	FALSE	canonical	3	52	junction_1	6	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTTCGCTTTTACTG	NA	False	NA	-7	True	AATAAA	-24	NA	63532099	63366461	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_63367407_63387415_63387559_63532019
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058779	chr17	+	393	1	ISM	ENSMUSG00000024085.14	ENSMUST00000086723.10	6991	22	153982	0	41099	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTTCTGGAGTAATT	NA	False	NA	9	True	AATAAA	-19	NA	65061712	65062105	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_65061700_65062100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058784	chr17	+	303	1	Intergenic	novelGene_185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTCTGTGGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	65768755	65769058	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_+_65768800_65769100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058823	chr17	-	949	4	NNC	ENSMUSG00000034647.16	novel	2342	8	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	33.9705755029261	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAACATTTTTTAGGAAA	NA	False	NA	NA	False	AATAAA	-27	NA	66384039	66344136	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_66344635_66356780_66356929_66359948_66360087_66383874
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058830	chr17	-	1133	8	FSM	ENSMUSG00000024099.16	ENSMUST00000143987.9	1697	8	-15	579	-15	224	multi-exon	FALSE	canonical	3	4006	junction_3	144.496027768297	9507	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTTTCCTTTGTATCT	5437	False	NA	NA	False	AGTAAA	-20	NA	66408569	66386211	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66408409
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058912	chr17	-	1059	4	NNC	ENSMUSG00000052105.18	novel	2423	6	NA	NA	11908	8	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	102.924999662645	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGTACAGTTTTCTGAT	NA	False	NA	3	True	AATAAA	-27	NA	66669751	66654952	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_66655517_66661117_66661373_66665016_66665185_66669679
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058917	chr17	-	567	1	NIC	ENSMUSG00000052105.18	novel	7221	14	NA	NA	-1979	8	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGTACAGTTTTCTGAT	NA	False	NA	3	True	AATAAA	-27	NA	66655519	66654952	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_66655000_66655500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058928	chr17	-	788	5	NNC	ENSMUSG00000100572.2	novel	764	3	NA	NA	1	2456	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	9.90896059130321	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCACAGCCAATTCATTAT	NA	False	NA	1	True	ATTAAA	-19	NA	69584202	69579900	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_69580313_69582162_69582295_69582786_69582887_69583120_69583191_69584128
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058930	chr17	-	862	5	NNC	ENSMUSG00000100572.2	novel	764	3	NA	NA	1	2456	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	15.2704780540755	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCACAGCCAATTCATTAT	NA	False	NA	1	True	ATTAAA	-19	NA	69584202	69579900	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_69580313_69582162_69582295_69582786_69582887_69583120_69583191_69584054
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058940	chr17	-	888	5	NNC	ENSMUSG00000100572.2	novel	764	3	NA	NA	1	2456	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	15.6923548264752	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCACAGCCAATTCATTAT	NA	False	NA	1	True	ATTAAA	-19	NA	69584202	69579900	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_69580339_69582162_69582295_69582786_69582887_69583120_69583191_69584054
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000058956	chr17	-	747	5	NNC	ENSMUSG00000100572.2	novel	764	3	NA	NA	0	612	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	16.1941347407016	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGGTTTGGTGCTTCATC	NA	False	NA	NA	False	NA	NA	NA	69584203	69581744	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_69582041_69582162_69582295_69582786_69582887_69583120_69583191_69584054
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059002	chr17	-	1477	3	FSM	ENSMUSG00000047407.18	ENSMUST00000172229.8	1446	3	-31	0	-7	0	multi-exon	FALSE	canonical	3	41	junction_2	419.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAGCATTTTCTTGAAG	NA	False	NA	84	True	AATAAA	-26	NA	71156816	71151199	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_71152268_71153166_71153394_71156634
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059011	chr17	-	1461	3	NNC	ENSMUSG00000047407.18	novel	1714	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	435	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAATGAAGAGCATTTTC	NA	False	NA	78	True	AATAAA	-20	NA	71156801	71151205	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_71152268_71153166_71153394_71156629
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059030	chr17	+	534	1	FSM	ENSMUSG00000100865.3	ENSMUST00000184151.3	473	1	-31	-30	-31	30	mono-exon	FALSE	NA	NA	NA	NA	NA	568	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGCATGGAATAATTGGGA	211	False	NA	NA	False	AATAAA	-45	NA	71182803	71183337	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_71182800_71183300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059057	chr17	-	981	4	NNC	ENSMUSG00000024048.16	novel	1937	4	NA	NA	-42	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1388.00920586124	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTGTTTAGCGTTATTT	2252	False	NA	-16	True	ATTAAA	-17	NA	71309224	71301285	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_71301780_71303104_71303267_71303691_71303891_71309098
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059071	chr17	-	1172	4	ISM	ENSMUSG00000024053.12	ENSMUST00000233148.2	758	5	12186	-845	-65	0	3prime_fragment	FALSE	canonical	2	7	junction_2	4.49691252107735	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCTTTTCTGTATTTGG	NA	False	NA	-5	True	AATAAA	-17	NA	71563406	71559166	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_71560089_71562113_71562243_71562974_71563008_71563318
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059092	chr17	-	1216	4	NNC	ENSMUSG00000085492.8	novel	781	3	NA	NA	-12	46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	34.8807492274273	54	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTACTGTTCTTTTTT	NA	False	NA	-2	True	GATAAA	-21	NA	71905762	71895505	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_71895980_71897482_71897518_71898852_71898942_71905144
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059105	chr17	+	3460	18	FSM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	-10	0	-10	0	multi-exon	FALSE	canonical	3	1341	junction_7	117.232918130641	355	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGTCTCGTGGTGTATA	NA	False	NA	18	True	AATAAA	-18	NA	71923199	71966026	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059138	chr17	-	1512	10	NIC	ENSMUSG00000058704.10	novel	3163	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	80.0302411977675	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	74602516	74507696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686_74601765_74602407
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059156	chr17	-	354	1	Genic_Genomic	ENSMUSG00000024067.15	novel	NA	NA	NA	NA	16377	1	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTTGTATATGACAAGTA	NA	False	NA	-9	True	AATAAA	-25	NA	74606821	74606467	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr17_-_74606500_74606800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059167	chr17	-	677	4	NNC	ENSMUSG00000024067.15	novel	734	5	NA	NA	-20	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1041.70831916723	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATAGTTGTTGTATATG	NA	False	NA	-16	True	AATAAA	-18	NA	74623423	74606474	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_74606820_74614714_74614858_74623006_74623112_74623339
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059194	chr17	+	1605	14	FSM	ENSMUSG00000024069.15	ENSMUST00000024870.9	2148	14	-7	550	-7	4	multi-exon	TRUE	canonical	3	152	junction_5	21.3572043468894	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGCAGTGAGGTCTTT	NA	False	NA	18	True	TATAAA	-21	NA	74702595	74730666	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059220	chr17	+	402	1	ISM	ENSMUSG00000024072.10	ENSMUST00000024873.7	2133	6	9478	905	5043	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGTCAATATTCACCT	NA	False	NA	6	True	AATAAA	-22	NA	74805965	74806367	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_74806000_74806400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059221	chr17	-	428	3	NNC	ENSMUSG00000117358.2	novel	327	3	NA	NA	212	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	48.5	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTCAGTGTTCCCCTT	NA	False	NA	1	True	AATAAA	-20	NA	74834427	74826653	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_74826911_74830509_74830574_74834320
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059243	chr17	+	228	1	Intergenic	novelGene_186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATTGTTGCCAGGCGGTG	NA	False	NA	NA	False	AAAAAG	-24	NA	75268936	75269164	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_+_75268900_75269200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059252	chr17	-	1934	8	FSM	ENSMUSG00000056121.17	ENSMUST00000070039.14	1939	8	10	-5	10	-2	multi-exon	FALSE	canonical	3	258	junction_3	15.727267365169	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTGAGTTTTTGTTCG	NA	False	NA	-1	True	AATAAA	-18	NA	78725550	78685308	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_78686175_78689036_78689103_78692172_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059284	chr17	-	1280	4	ISM	ENSMUSG00000038045.15	ENSMUST00000146474.8	764	5	-128	-22	-128	22	intron_retention	FALSE	canonical	3	141	junction_3	32.273139846559	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGTTGTTCTAGAGTCA	NA	False	NA	6	True	ATTAAA	-38	NA	79202657	79192303	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_79192646_79196359_79196517_79198274_79198370_79201971
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059313	chr17	-	334	1	NIC	ENSMUSG00000038045.15	novel	2060	7	NA	NA	9882	12	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTGTCAGTGTGTTGT	NA	False	NA	-4	True	ATTAAA	-28	NA	79192647	79192313	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_79192300_79192600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059330	chr17	+	772	5	FSM	ENSMUSG00000062691.11	ENSMUST00000063817.7	753	5	-15	-4	2	4	multi-exon	FALSE	canonical	3	300	junction_1	562.646592009585	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGGGTCTGCAGTTTG	NA	False	NA	NA	False	AATAAA	-26	NA	79223930	79227739	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_79224123_79225785_79225902_79226484_79226530_79227187_79227273_79227405
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059342	chr17	+	957	5	NIC	ENSMUSG00000062691.11	novel	753	5	NA	NA	-17	3	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	686.839500902503	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGGGTCTGCAGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	79224111	79227738	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_79224490_79225785_79225902_79226484_79226530_79227187_79227273_79227405
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059347	chr17	+	571	4	NNC	ENSMUSG00000062691.11	novel	602	5	NA	NA	1655	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	752.565537935992	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTGTGTGGGTCTGCAG	NA	False	NA	NA	False	AATAAA	-22	NA	79225783	79227735	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_79225902_79226491_79226530_79227187_79227273_79227405
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059368	chr17	+	729	2	FSM	ENSMUSG00000024082.6	ENSMUST00000233138.2	514	2	-24	-191	-1	191	multi-exon	FALSE	canonical	3	397	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTAGTTTTGGGTTG	NA	False	NA	NA	False	AAAAAG	-3	NA	79244563	79245581	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_79244631_79244919
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059403	chr17	+	1482	7	NNC	ENSMUSG00000024084.9	novel	864	3	NA	NA	10988	-2	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_1	82.476259210353	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGAATTTATTTTCAT	NA	False	NA	9	True	ATTAAA	-18	NA	79370604	79397648	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_79370670_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059410	chr17	+	145	1	Intergenic	novelGene_187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGAGTATGTCTTTT	9459	False	NA	NA	False	AATAAA	-19	NA	79990097	79990242	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_+_79990100_79990200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059443	chr17	-	2252	7	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	135	junction_1	822.802257869748	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATATTCAGTCTTTGG	NA	False	NA	-11	True	AATAAA	-23	NA	80514734	80507508	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_80509032_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059449	chr17	-	2275	7	NNC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	861.791625368659	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATATTCAGTCTTTGG	NA	False	NA	-11	True	AATAAA	-23	NA	80514734	80507508	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_80509032_80510096_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059468	chr17	-	1923	7	FSM	ENSMUSG00000024097.12	ENSMUST00000235036.2	1921	7	0	-2	0	0	multi-exon	FALSE	canonical	3	1059	junction_3	429.146601472685	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514734	80508738	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80512868_80513276_80513458_80514603
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059470	chr17	-	1036	7	NNC	ENSMUSG00000024097.12	novel	1040	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	824.318792835771	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514734	80508738	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_80509032_80510096_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059473	chr17	-	989	7	FSM	ENSMUSG00000024097.12	ENSMUST00000234696.2	987	7	-2	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	923.958693160396	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514734	80508738	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_80509032_80510119_80510174_80511583_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059475	chr17	-	1165	9	NNC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_6	914.111146141431	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514734	80508738	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512403_80512511_80512690_80512868_80513276_80513458_80514603
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059477	chr17	-	1509	9	FSM	ENSMUSG00000024097.12	ENSMUST00000234503.2	1991	9	2	480	0	0	multi-exon	FALSE	canonical	3	75	junction_6	890.532565378718	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514734	80508738	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512050_80512511_80512690_80512868_80513276_80513458_80514603
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059479	chr17	-	1156	9	NNC	ENSMUSG00000024097.12	novel	1991	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_6	890.147003309004	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514734	80508738	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512403_80512511_80512690_80512868_80513276_80513458_80514603
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059484	chr17	-	1899	7	FSM	ENSMUSG00000024097.12	ENSMUST00000234889.2	1898	7	-1	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	729.529623951092	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514734	80508738	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511583_80511662_80511741_80512868_80513276_80513458_80514603
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059485	chr17	-	1689	8	NIC	ENSMUSG00000024097.12	novel	1991	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	130	junction_5	756.932234855449	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514734	80508738	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512050_80512868_80513276_80513458_80514603
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059488	chr17	-	1062	8	NNC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	818.007459673585	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514734	80508738	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513272_80513458_80514603
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059489	chr17	-	977	8	NNC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	750.743006110939	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514734	80508738	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511631_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059491	chr17	-	1518	9	NIC	ENSMUSG00000024097.12	novel	1991	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_6	914.476352892736	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514734	80508738	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512050_80512511_80512690_80512868_80513276_80513458_80514603
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059494	chr17	-	1887	6	NIC	ENSMUSG00000024097.12	novel	1921	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	135	junction_1	856.009719570987	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514734	80508738	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_80509032_80510119_80510174_80511559_80511662_80511741_80512868_80513276_80513458_80514603
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059517	chr17	-	1741	8	NIC	ENSMUSG00000024097.12	novel	1921	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	75	junction_5	773.379728258785	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTTGATTTTTGTGTT	NA	False	NA	-9	True	AATAAA	-14	NA	80514734	80508740	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80512511_80512690_80512868_80513276_80513458_80514603
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059531	chr17	+	1148	3	FSM	ENSMUSG00000055760.13	ENSMUST00000069486.13	1134	3	-7	-7	-7	7	multi-exon	FALSE	canonical	3	317	junction_1	34	1419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTATTCTTAAAATATTG	NA	False	NA	46	True	ATTAAA	-37	NA	80531862	80535933	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_80532100_80533049_80533194_80535166
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059540	chr17	+	759	3	FSM	ENSMUSG00000055760.13	ENSMUST00000156869.2	668	3	35	-126	35	126	multi-exon	FALSE	canonical	1	1	junction_2	158	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGACTTTGTTTTCTTTCTT	NA	False	NA	NA	False	AATAAA	-26	NA	80531904	80534373	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_80532100_80533049_80533194_80533953
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059544	chr17	+	685	1	Genic_Genomic	ENSMUSG00000055760.13	novel	NA	NA	NA	NA	3379	7	mono-exon	FALSE	NA	NA	NA	NA	NA	641	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTATTCTTAAAATATTG	NA	False	NA	46	True	ATTAAA	-37	NA	80535248	80535933	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr17_+_80535200_80535900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059583	chr17	+	208	1	ISM	ENSMUSG00000032624.17	ENSMUST00000234460.2	5286	24	129161	0	23853	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83787582	83787790	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_83787600_83787800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059586	chr17	-	1116	3	FSM	ENSMUSG00000024248.15	ENSMUST00000025095.9	1076	3	-37	-3	-37	3	multi-exon	TRUE	canonical	0	0	junction_1	644	7530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTTTGTTTTTTT	9910	False	NA	-20	True	AATAAA	-26	NA	83821796	83809343	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_83810167_83811528_83811658_83821632
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059607	chr17	-	1129	3	NNC	ENSMUSG00000024248.15	novel	1076	3	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTAGTTTGTTTGTTT	9947	False	NA	-31	True	AATAAA	-15	NA	83821759	83809354	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_83810167_83811528_83811658_83821571
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059619	chr17	-	1057	3	NNC	ENSMUSG00000024248.15	novel	1076	3	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTTTAGTTTGTTTGT	9947	False	NA	-33	True	AATAAA	-13	NA	83821759	83809356	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_83810167_83811528_83811649_83821632
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059670	chr17	+	329	1	Intergenic	novelGene_188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGAAGTTTCTTTTTCTC	7605	False	NA	NA	False	AATAAA	-24	NA	85098289	85098618	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_+_85098300_85098600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059672	chr17	+	682	2	Intergenic	novelGene_189	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAAAAGAAGAAAGATCAA	541	False	NA	NA	False	NA	NA	NA	85190606	85191351	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_+_85191013_85191075
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059677	chr17	+	2543	5	ISM	ENSMUSG00000061130.14	ENSMUST00000234851.2	1307	7	325	6651	325	-69	5prime_fragment	FALSE	canonical	3	708	junction_4	378.362921016317	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACATATTACTCTTTGG	NA	False	NA	30	True	AATAAA	-19	NA	85301432	85324556	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85322836
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059705	chr17	-	637	2	Antisense	novelGene_ENSMUSG00000071037.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTGTGTATGTAAATTC	NA	False	NA	NA	False	AATAAA	-17	NA	85470115	85466390	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr17_-_85466943_85470030
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059710	chr17	+	1048	8	ISM	ENSMUSG00000071037.7	ENSMUST00000095188.7	1595	11	301019	-1	299488	1	3prime_fragment	TRUE	canonical	3	62	junction_3	5.28764443523479	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGTTTCAATCTATCG	7749	False	NA	11	True	AATAAA	-27	NA	85698998	85766017	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_85699062_85700885_85700941_85702029_85702094_85709853_85709921_85738898_85738974_85746954_85747019_85759623_85759756_85765489
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059720	chr17	-	450	1	Genic_Genomic	ENSMUSG00000024135.11	novel	NA	NA	NA	NA	55251	1	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTGCTGTTCATTGA	NA	False	NA	0	True	AATAAA	-16	NA	86292541	86292091	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr17_-_86292100_86292500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059732	chr17	-	320	1	Genic_Genomic	ENSMUSG00000024145.7	novel	NA	NA	NA	NA	27836	5	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCAGATGCTGTTCGCTG	1936	False	NA	-7	True	AATAAA	-20	NA	87304998	87304678	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr17_-_87304700_87305000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059733	chr17	-	973	6	NNC	ENSMUSG00000024145.7	novel	988	6	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	134.12173574779	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGTT	NA	False	NA	-12	True	AATAAA	-15	NA	87332826	87304683	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_87304996_87316237_87316340_87327828_87327946_87329286_87329379_87331092_87331342_87332725
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059736	chr17	-	871	5	NIC	ENSMUSG00000024145.7	novel	988	6	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	138.539705499904	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGTT	NA	False	NA	-12	True	AATAAA	-15	NA	87332826	87304683	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_87304996_87327828_87327946_87329286_87329379_87331092_87331342_87332725
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059817	chr17	-	647	1	NIC	ENSMUSG00000036438.15	novel	1205	6	NA	NA	12790	0	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCTCTGAATCTGAGT	NA	False	NA	-5	True	AATAAA	-21	NA	87741486	87740839	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_-_87740800_87741500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059848	chr17	-	555	1	FSM	ENSMUSG00000117522.2	ENSMUST00000234265.2	217	1	15	-353	15	353	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCCAGGTTGAATTTGT	NA	False	NA	NA	False	AATAAA	-24	NA	88276633	88276078	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_-_88276100_88276600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059857	chr17	+	134	1	ISM	ENSMUSG00000005370.5	ENSMUST00000005503.5	4251	10	15697	0	11056	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	False	NA	31	True	AATAAA	-20	NA	88298186	88298320	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_+_88298200_88298300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059858	chr17	-	191	1	ISM	ENSMUSG00000005371.16	ENSMUST00000130379.9	3753	23	73979	0	9933	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCTGAATTTACCACC	6914	False	NA	0	True	AATAAA	-17	NA	88298477	88298286	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_88298300_88298500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059861	chr17	+	516	2	Intergenic	novelGene_190	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	32	junction_1	0	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTTTGTTTTTTATTT	NA	False	NA	11	True	ACTAAA	-16	NA	88373796	88382163	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_+_88373996_88381846
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059894	chr17	+	1368	1	FSM	ENSMUSG00000043346.10	ENSMUST00000057074.10	747	1	-40	-581	-40	581	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAGCCATCACCAAGTAC	NA	False	NA	NA	False	ATTAAA	-44	NA	91544198	91545566	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_91544200_91545600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059897	chr17	+	203	1	Intergenic	novelGene_191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCCAGGGAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	92619506	92619709	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr17_+_92619500_92619700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059901	chr17	+	428	1	FSM	ENSMUSG00000117476.2	ENSMUST00000234959.2	313	1	-45	-70	-45	70	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGAGTAACTCACTGTT	NA	False	NA	NA	False	NA	NA	NA	94915567	94915995	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr17_+_94915600_94916000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059907	chr17	-	433	2	NNC	ENSMUSG00000055660.10	novel	2560	8	NA	NA	20865	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTATAGTGAGTCTCT	NA	False	NA	NA	False	AATATA	-16	NA	95036455	95034512	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_-_95034824_95036333
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059908	chr17	-	1681	8	ISM	ENSMUSG00000055660.10	ENSMUST00000234990.2	6640	9	1783	4495	1783	0	3prime_fragment	FALSE	canonical	3	71	junction_6	15.5261464790783	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTATAGTGAGTCTCT	NA	False	NA	NA	False	AATATA	-16	NA	95055537	95034512	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059923	chr17	+	389	3	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	-18	19018	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	73	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCATGGTTCATTTTGA	NA	False	NA	11	True	AATAAA	-16	NA	95057509	95101578	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_95057661_95063861_95063952_95101430
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059943	chr17	+	1293	10	NIC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	-3	3	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	48.1350979465191	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTCCCCTCCCATTTC	NA	False	NA	NA	False	AATAAA	-17	NA	95057536	95082563	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr17_+_95057661_95062638_95062734_95063861_95063952_95068925_95069033_95069889_95070049_95071199_95071353_95074284_95074376_95078540_95078667_95079284_95079389_95082319
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059956	chr17	+	436	5	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	3	19018	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	79.7413788443616	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCATGGTTCATTTTGA	NA	False	NA	11	True	AATAAA	-16	NA	95057542	95101578	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_95057661_95063861_95063952_95092912_95092936_95093195_95093277_95101454
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000059957	chr17	+	531	5	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	3	19018	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	78.5175139698144	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCATGGTTCATTTTGA	NA	False	NA	11	True	AATAAA	-16	NA	95057542	95101578	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95093172_95093277_95101454
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060004	chr18	+	557	1	ISM	ENSMUSG00000024231.16	ENSMUST00000025073.12	3727	20	51869	961	973	28	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTTTCTATGATGACG	NA	False	NA	100	True	NA	NA	NA	3434856	3435413	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr18_+_3434900_3435400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060007	chr18	+	1394	3	FSM	ENSMUSG00000024232.3	ENSMUST00000025075.3	5074	3	33	3647	33	-3647	multi-exon	FALSE	canonical	3	117	junction_2	19.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGGTGTCTTTCATGA	1	True	NA	24	True	AATATA	-19	NA	3507955	3512757	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_3508286_3511256_3511545_3511981
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060012	chr18	-	509	2	FSM	ENSMUSG00000024235.12	ENSMUST00000172805.2	2048	2	31	1508	-27	-1508	multi-exon	FALSE	canonical	3	28	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGTGCTGTGTGCTCTG	437	False	NA	NA	False	ATTAAA	-23	NA	4352984	4348962	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_-_4349339_4352851
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060017	chr18	+	2635	9	FSM	ENSMUSG00000024234.8	ENSMUST00000234422.2	2626	9	-7	-2	-3	0	multi-exon	FALSE	canonical	3	50	junction_2	58.5340445809103	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGATAACAGTATTTCTA	-15	True	NA	17	True	AATAAA	-18	NA	4375588	4397330	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_4375779_4379568_4379742_4380672_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060050	chr18	-	1296	1	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	39208	18	12225	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACATTTGAACCTTACT	NA	False	NA	-18	True	AATAAA	-24	NA	6202315	6201019	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr18_-_6201000_6202300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060063	chr18	+	524	1	FSM	ENSMUSG00000073640.4	ENSMUST00000097682.4	411	1	-46	-67	-46	67	mono-exon	FALSE	NA	NA	NA	NA	NA	2154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACATTCAGAGCTATTCA	NA	False	NA	NA	False	ATTAAA	-43	NA	6332585	6333109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_6332600_6333100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060113	chr18	-	483	3	Antisense	novelGene_ENSMUSG00000117644.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCTGTAGTATGTCCTC	7073	False	NA	NA	False	AATATA	-16	NA	9308302	9304912	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr18_-_9305145_9306080_9306214_9308184
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060132	chr18	+	1051	4	FSM	ENSMUSG00000024287.9	ENSMUST00000234890.2	891	4	-9	-151	5	22	multi-exon	FALSE	canonical	3	775	junction_2	35.5621521658443	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGGCACTGGAAGATGGC	1	True	NA	NA	False	ATTAAA	-15	NA	9958167	9961322	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060159	chr18	+	1748	2	Antisense	novelGene_ENSMUSG00000047879.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGAGAGTGCTAATGTAGC	NA	False	NA	NA	False	NA	NA	NA	10039513	10045973	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr18_+_10039644_10044355
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060169	chr18	+	898	4	FSM	ENSMUSG00000002477.6	ENSMUST00000002551.5	858	4	-34	-6	-34	6	multi-exon	FALSE	canonical	3	1823	junction_2	40.4337592722825	10120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCATGTCTTTACTCCCA	NA	False	NA	14	True	AATAAA	-21	NA	10617740	10628236	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_10617927_10623630_10623708_10626825_10627018_10627793
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060202	chr18	+	439	1	Genic_Genomic	ENSMUSG00000002477.6	novel	NA	NA	NA	NA	-6167	1	mono-exon	FALSE	NA	NA	NA	NA	NA	556	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGGTGCATGTCTTTAC	9747	False	NA	9	True	AATAAA	-16	NA	10627792	10628231	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr18_+_10627800_10628200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060204	chr18	-	225	1	ISM	ENSMUSG00000002475.17	ENSMUST00000117828.9	1962	9	62136	0	14154	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTTTGTGAGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	10644635	10644410	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr18_-_10644400_10644600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060232	chr18	-	192	1	Intergenic	novelGene_192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTAGCCTCCTCTTTTAC	NA	False	NA	NA	False	AATAAA	-28	NA	12633839	12633647	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr18_-_12633600_12633800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060234	chr18	-	777	1	Intergenic	novelGene_193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTTCTCTTATTGTTTC	9847	False	NA	NA	False	CATAAA	-19	NA	12638616	12637839	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr18_-_12637800_12638600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060266	chr18	-	2953	11	FSM	ENSMUSG00000037013.18	ENSMUST00000040924.9	3098	11	139	6	3	0	multi-exon	FALSE	canonical	3	178	junction_3	289.216597034126	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	NA	False	NA	-19	True	AATAAA	-17	NA	14815832	14758685	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060285	chr18	+	859	1	ISM	ENSMUSG00000036743.5	ENSMUST00000234922.2	1918	7	55240	0	34897	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTGTCTCCTTCAAAGG	NA	False	NA	13	True	NA	NA	NA	14894499	14895358	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr18_+_14894500_14895400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060293	chr18	+	627	1	FSM	ENSMUSG00000058064.7	ENSMUST00000079733.7	534	1	-29	-64	-29	64	mono-exon	FALSE	NA	NA	NA	NA	NA	4345	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCAATGTTATGAATTTC	NA	False	NA	NA	False	AATAAA	-39	NA	15965821	15966448	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_15965800_15966400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060294	chr18	+	472	2	Genic_Genomic	ENSMUSG00000058064.7	novel	534	1	NA	NA	-21	52	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAAAATGCTATCCAAT	NA	False	NA	NA	False	AATAAA	-27	NA	15965829	15966436	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr18_+_15966123_15966257
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060302	chr18	-	522	1	FSM	ENSMUSG00000063628.3	ENSMUST00000076710.3	297	1	-66	-159	-66	159	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTAATCATGGGATTT	NA	False	NA	NA	False	AATAAA	-44	NA	16408067	16407545	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_-_16407500_16408100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060305	chr18	+	354	1	Intergenic	novelGene_194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	18961953	18962307	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr18_+_18962000_18962300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060316	chr18	+	646	2	Intergenic	novelGene_195	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	15	True	NA	NA	NA	20895474	20911828	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr18_+_20895821_20911528
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060381	chr18	-	445	3	FSM	ENSMUSG00000086287.2	ENSMUST00000132571.2	418	3	-27	0	-27	0	multi-exon	FALSE	canonical	0	0	junction_1	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAATGGCTTTATTAATG	NA	False	NA	NA	False	ATTAAA	-17	NA	23885389	23883503	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_-_23883617_23884636_23884881_23885301
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060389	chr18	+	611	1	ISM	ENSMUSG00000024277.15	ENSMUST00000170802.8	3936	8	139426	1492	87656	5	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGAAATTTCTTTTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	24024815	24025426	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr18_+_24024800_24025400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060392	chr18	+	732	1	FSM	ENSMUSG00000117405.2	ENSMUST00000234075.2	592	1	-31	-109	-31	109	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAATTCCTCAGAGAAGGA	NA	False	NA	NA	False	AATAAA	-43	NA	24077984	24078716	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_24078000_24078700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060393	chr18	+	800	2	Genic_Genomic	ENSMUSG00000117405.2	novel	592	1	NA	NA	-31	243	multi-exon	FALSE	canonical	0	0	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCCTATAGCTGAACTAGC	NA	False	NA	NA	False	NA	NA	NA	24077984	24078850	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr18_+_24078717_24078782
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060404	chr18	+	932	1	ISM	ENSMUSG00000063281.10	ENSMUST00000074941.8	3040	3	14808	5	14808	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGAAAATTTCTTACTG	NA	False	NA	NA	False	AATAAA	-21	NA	24137496	24138428	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr18_+_24137500_24138400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060455	chr18	-	1336	7	FSM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	-20	2983	-20	7	multi-exon	FALSE	canonical	3	196	junction_1	46.8807589054993	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTAAGTTTTTTTTT	NA	False	NA	NA	False	AATGAA	-24	NA	24663281	24620999	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_-_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060480	chr18	+	539	5	ISM	ENSMUSG00000033632.17	ENSMUST00000162149.2	1427	6	-3	86853	3	14822	5prime_fragment	FALSE	canonical	3	40	junction_3	4.32290411644765	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTTATACTTTATTTT	NA	False	NA	NA	False	AAGAAA	-19	NA	25302073	25337112	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060494	chr18	+	170	1	Intergenic	novelGene_196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTAGGCAGTTTCTGTG	NA	False	NA	NA	False	AGTAAA	-28	NA	29477977	29478147	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr18_+_29478000_29478100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060496	chr18	+	178	1	Intergenic	novelGene_197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTCTCTCGTGAGTTCT	NA	False	NA	NA	False	NA	NA	NA	30319598	30319776	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr18_+_30319600_30319800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060507	chr18	+	1354	5	ISM	ENSMUSG00000024260.15	ENSMUST00000025109.8	4015	21	76951	-7	76155	7	3prime_fragment	FALSE	canonical	3	176	junction_3	5.22015325445528	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTTGCCTCTTTCTAAC	NA	False	NA	15	True	AATAAA	-27	NA	31844386	31856121	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr18_+_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060522	chr18	+	1058	4	NNC	ENSMUSG00000024258.5	novel	1015	4	NA	NA	-33	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	336.469249048937	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTATTTATTTGTTAAT	NA	False	NA	27	True	AATAAA	-26	NA	31922178	31929760	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_31922298_31924892_31925074_31928340_31928441_31929102
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060565	chr18	+	2678	15	FSM	ENSMUSG00000024382.14	ENSMUST00000025241.7	2708	15	30	0	-24	0	multi-exon	FALSE	canonical	3	78	junction_6	14.4393524078881	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTCTCTATTTTATTG	NA	False	NA	NA	False	TATAAA	-24	NA	32373382	32403204	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_32373475_32373682_32373889_32376016_32376254_32377851_32377902_32378541_32378678_32378804_32378973_32379619_32379825_32381215_32381531_32387133_32387319_32390242_32390446_32394354_32394452_32397600_32397719_32398670_32398790_32400216_32400370_32402810
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060569	chr18	+	875	4	ISM	ENSMUSG00000024381.17	ENSMUST00000234373.2	2682	6	3653	-7	3653	3	3prime_fragment	FALSE	canonical	3	19	junction_1	5.55777733351102	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGGCGTGTCTTTCTTTGC	6266	False	NA	19	True	AAAAAG	-26	NA	32564739	32568793	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr18_+_32564796_32565035_32565147_32565376_32565479_32568187
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060601	chr18	+	425	2	FSM	ENSMUSG00000087590.3	ENSMUST00000179138.2	303	2	-100	-22	-53	5	multi-exon	FALSE	canonical	3	41	junction_1	0	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTATGTTGTGTGATTGG	NA	False	NA	20	True	AATAAA	-24	NA	33927891	33929044	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_33928178_33928905
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060610	chr18	+	428	3	NNC	ENSMUSG00000087590.3	novel	430	3	NA	NA	-1	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	212.5	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTATGTTGTGTGATTGG	NA	False	NA	20	True	AATAAA	-24	NA	33927943	33929044	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_33928170_33928435_33928499_33928905
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060612	chr18	+	425	3	NNC	ENSMUSG00000087590.3	novel	430	3	NA	NA	-1	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	188.5	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTATGTTGTGTGATTGG	NA	False	NA	20	True	AATAAA	-24	NA	33927943	33929044	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_33928178_33928435_33928488_33928905
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060614	chr18	+	427	3	NNC	ENSMUSG00000087590.3	novel	430	3	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	188.5	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGTATGTTGTGTGATT	NA	False	NA	18	True	AATAAA	-22	NA	33927943	33929042	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_33928178_33928435_33928492_33928905
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060622	chr18	+	694	2	NIC	ENSMUSG00000087590.3	novel	430	3	NA	NA	-1	5	intron_retention	FALSE	canonical	3	425	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTATGTTGTGTGATTGG	NA	False	NA	20	True	AATAAA	-24	NA	33927943	33929044	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr18_+_33928499_33928905
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060624	chr18	+	1101	1	FSM	ENSMUSG00000092819.3	ENSMUST00000175078.3	132	1	-273	-696	-273	696	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTATGTTGTGTGATTGG	NA	False	NA	20	True	AATAAA	-24	NA	33927943	33929044	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_33927900_33929000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060637	chr18	+	923	5	FSM	ENSMUSG00000014504.17	ENSMUST00000072576.10	876	5	-42	-5	-20	5	multi-exon	FALSE	canonical	3	833	junction_3	511.998291012773	3577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCTTTCACTTAGGAATC	NA	False	NA	9	True	AATAAA	-19	NA	34464155	34469657	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_34464313_34464802_34464879_34467345_34467418_34467509_34467622_34469151
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060654	chr18	+	873	5	NNC	ENSMUSG00000014504.17	novel	876	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	743.98151858766	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGTAGCTTTCACTTAG	NA	False	NA	4	True	AATAAA	-14	NA	34464197	34469652	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_34464313_34464802_34464883_34467352_34467418_34467509_34467622_34469151
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060671	chr18	+	501	1	ISM	ENSMUSG00000014504.17	ENSMUST00000072576.10	876	5	4954	0	4923	0	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGTAGCTTTCACTTAG	NA	False	NA	4	True	AATAAA	-14	NA	34469151	34469652	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr18_+_34469200_34469700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060677	chr18	-	635	4	NIC	ENSMUSG00000005873.7	novel	2852	5	NA	NA	-25	4	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	233.445687235573	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCTTTGTTGTCGTAT	5536	False	NA	-1	True	ATTAAA	-22	NA	34506447	34480040	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr18_-_34480222_34482687_34482857_34505457_34505552_34506256
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060695	chr18	-	2087	17	FSM	ENSMUSG00000024370.18	ENSMUST00000025228.12	2084	17	0	-3	0	3	multi-exon	FALSE	canonical	3	73	junction_1	259.182247655969	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACTGTTCTTTCTAGAG	NA	False	NA	NA	False	AATAAA	-17	NA	34784788	34764000	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_-_34764355_34767135_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060703	chr18	-	3040	16	FSM	ENSMUSG00000024370.18	ENSMUST00000133181.2	4133	16	0	1093	0	902	multi-exon	FALSE	canonical	3	906	junction_9	78.8679909722569	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATTTGTGCATGAAAAA	NA	False	NA	-1	True	AATAAA	-27	NA	34784788	34765828	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060719	chr18	-	1309	1	Genic_Genomic	ENSMUSG00000024360.9	novel	NA	NA	NA	NA	27916	2	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTGCTTGAGATTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	35037144	35035835	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr18_-_35035800_35037100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060747	chr18	-	986	1	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	911	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1213	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCGTTGTAATCTTCT	NA	False	NA	-19	True	CATAAA	-5	NA	35071452	35070466	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr18_-_35070500_35071500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060749	chr18	-	2821	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	5	-219	at_least_one_novel_splicesite	TRUE	canonical	1	36	junction_9	1557.8670313926	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTGTGAATGGTGAT	204	False	NA	-11	True	AATAAA	-19	NA	35087405	35070685	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079086_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060771	chr18	-	286	1	Genic_Genomic	ENSMUSG00000024357.11	novel	NA	NA	NA	NA	33136	2	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTCTCTTGTGTCTGTC	NA	False	NA	0	True	ATTAAA	-20	NA	35399732	35399446	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr18_-_35399400_35399700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060790	chr18	+	1045	4	NNC	ENSMUSG00000117869.2	novel	1190	4	NA	NA	0	-102	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94.9888882390403	341	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTTTATGTGTAGGT	NA	False	NA	NA	False	NA	NA	NA	35686460	35691267	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_35686517_35687479_35687515_35689668_35689745_35690389
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060800	chr18	+	727	4	NNC	ENSMUSG00000117869.2	novel	1190	4	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94.9888882390403	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAATTTCATTGGCAT	NA	False	NA	NA	False	NA	NA	NA	35686460	35690939	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_35686527_35687479_35687515_35689668_35689745_35690389
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060804	chr18	+	722	3	NNC	ENSMUSG00000117869.2	novel	1676	3	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAATTTCATTGGCAT	NA	False	NA	NA	False	NA	NA	NA	35686460	35690939	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_35686557_35689668_35689745_35690389
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060812	chr18	+	556	1	NIC	ENSMUSG00000117869.2	novel	1190	4	NA	NA	1192	4	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAATTTCATTGGCAT	NA	False	NA	NA	False	NA	NA	NA	35690383	35690939	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr18_+_35690400_35690900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060827	chr18	+	1495	4	FSM	ENSMUSG00000037058.17	ENSMUST00000041314.17	1475	4	-18	-2	-18	1	multi-exon	FALSE	canonical	3	2803	junction_2	114.719948860983	5704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCTTGTGTTATTGGTG	4622	False	NA	24	True	AATAAA	-18	NA	35731651	35750241	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_35731813_35743923_35744088_35746375_35746556_35749251
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060845	chr18	+	1464	4	NNC	ENSMUSG00000037058.17	novel	1475	4	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1431.34955743017	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGCTTGTGTTATTGG	4656	False	NA	22	True	AATAAA	-16	NA	35731685	35750239	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_35731813_35743923_35744097_35746379_35746556_35749251
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060863	chr18	+	613	2	FSM	ENSMUSG00000037058.17	ENSMUST00000237730.2	602	2	5	-16	5	16	multi-exon	FALSE	canonical	3	2803	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTGAGGAGCCCTTTTT	3350	False	NA	NA	False	AATAAA	-23	NA	35744042	35746943	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_35744088_35746375
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060866	chr18	+	1217	3	NNC	ENSMUSG00000037058.17	novel	1475	4	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1538.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGCTTGTGTTATTGG	3350	False	NA	22	True	AATAAA	-16	NA	35744042	35750239	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_35744092_35746375_35746556_35749251
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060878	chr18	-	614	5	NIC	ENSMUSG00000024352.13	novel	702	6	NA	NA	-1	7	combination_of_known_junctions	TRUE	canonical	3	22	junction_4	65.5820097282784	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCAACCTCTCTACCTTC	NA	False	NA	0	True	AATAAA	-33	NA	35795210	35789734	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr18_-_35789898_35790001_35790105_35793335_35793407_35793496_35793628_35795064
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060898	chr18	-	1235	8	FSM	ENSMUSG00000024350.7	ENSMUST00000025208.7	5146	8	-7	3918	-7	10	multi-exon	FALSE	canonical	3	57	junction_2	8.80630571852711	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGCTGACTTTGTTGG	NA	False	NA	0	True	AATACA	-24	NA	35836181	35808073	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_-_35808297_35813818_35813992_35814972_35815083_35816270_35816378_35819720_35819907_35830030_35830177_35833856_35834044_35836078
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060944	chr18	+	486	1	NIC	ENSMUSG00000046727.14	novel	1385	5	NA	NA	36713	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGACTTACTCCAGG	4506	False	NA	16	True	AATAAA	-16	NA	36535546	36536032	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr18_+_36535500_36536000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060962	chr18	-	624	3	FSM	ENSMUSG00000024346.7	ENSMUST00000237792.2	1024	3	-7	407	-7	122	multi-exon	FALSE	canonical	3	64	junction_1	1494	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGTGCTTTTCTCCAC	NA	False	NA	-23	True	AATAAA	-20	NA	36587584	36537135	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_-_36537514_36584132_36584300_36587505
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000060972	chr18	-	668	4	NIC	ENSMUSG00000024346.7	novel	1109	4	NA	NA	13	122	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	1447.65465495055	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGTGCTTTTCTCCAC	NA	False	NA	-23	True	AATAAA	-20	NA	36587564	36537135	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr18_-_36537514_36565358_36565444_36584153_36584300_36587505
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061045	chr18	+	2477	3	FSM	ENSMUSG00000033272.13	ENSMUST00000036158.7	2462	3	-13	-2	0	-1	multi-exon	FALSE	canonical	3	269	junction_1	96	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTGTCCTGTCTTCTG	NA	False	NA	18	True	AATAAA	-36	NA	36812631	36816913	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_36812677_36813568_36813668_36814580
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061052	chr18	+	1124	1	ISM	ENSMUSG00000033272.13	ENSMUST00000186538.7	2842	3	3522	1	3128	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTGTCCTGTCTTCTG	NA	False	NA	18	True	AATAAA	-36	NA	36815789	36816913	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr18_+_36815800_36816900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061089	chr18	+	1966	20	NNC	ENSMUSG00000024474.8	novel	1955	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	168.043095646503	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTGTTGGGCATTCC	NA	False	NA	10	True	ATTAAA	-20	NA	36877744	36890692	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887692_36888478_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061107	chr18	+	1619	7	FSM	ENSMUSG00000042660.9	ENSMUST00000049323.9	1619	7	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_5	28.487814158962	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGGTGCCAAGCTGGGA	NA	False	NA	4	True	AATAAA	-19	NA	36893272	36896863	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_36893534_36895029_36895131_36895218_36895307_36895407_36895588_36895710_36895811_36895901_36896072_36896144
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061110	chr18	+	1589	7	NNC	ENSMUSG00000042660.9	novel	1619	7	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	123.108917449369	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGGTGCCAAGCTGGGA	NA	False	NA	4	True	AATAAA	-19	NA	36893300	36896863	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_36893532_36895029_36895131_36895218_36895307_36895407_36895588_36895710_36895811_36895901_36896072_36896144
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061127	chr18	-	1971	13	FSM	ENSMUSG00000001380.8	ENSMUST00000001416.8	1989	13	18	0	18	0	multi-exon	FALSE	canonical	3	550	junction_8	68.8118913334671	473	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTGTGTCCTTGATGC	NA	False	NA	-2	True	AATAAA	-16	NA	36916240	36899580	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_-_36900007_36900242_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905310_36905437_36906572_36906669_36909229_36909350_36915732_36915823_36916063
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061181	chr18	-	318	1	ISM	ENSMUSG00000024456.17	ENSMUST00000115634.8	5666	27	91558	0	9489	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTCTAGCCTCCTTTG	NA	False	NA	-20	True	AATAAA	-15	NA	37976971	37976653	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr18_-_37976700_37977000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061226	chr18	-	1914	5	FSM	ENSMUSG00000052102.16	ENSMUST00000237487.2	1929	5	0	15	0	0	multi-exon	FALSE	canonical	3	53	junction_1	550.877028019866	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTTTGTGAATTTTG	NA	False	NA	-22	True	AATAAA	-2	NA	38472033	38460602	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_-_38462027_38466206_38466390_38468068_38468171_38471143_38471276_38471960
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061241	chr18	+	1725	8	FSM	ENSMUSG00000024425.5	ENSMUST00000025293.5	1392	8	20	-353	5	-5	multi-exon	FALSE	canonical	3	22	junction_7	234.910230357323	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGATTAGTGTTTCATT	9149	False	NA	39	True	AATAAA	-24	NA	38552041	38598245	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_38552230_38575969_38576058_38580743_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597313
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061254	chr18	-	2298	6	FSM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	62	968	-24	-968	multi-exon	FALSE	canonical	3	266	junction_2	22.8962879087419	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCAGTTTTTGCTAGTAC	NA	False	NA	-5	True	AATAAA	-17	NA	40352420	40337916	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061261	chr18	-	917	7	FSM	ENSMUSG00000056671.8	ENSMUST00000235606.2	868	7	-32	-17	-32	17	multi-exon	FALSE	canonical	3	300	junction_2	31.5722275988812	1613	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGCTGATTGCCTGTA	NA	False	NA	3	True	AATAAA	-40	NA	42084339	42008647	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_-_42008919_42014277_42014351_42045434_42045541_42065665_42065827_42068232_42068307_42070698_42070757_42084165
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061329	chr18	-	2441	1	FSM	ENSMUSG00000043424.11	ENSMUST00000057110.11	2379	1	-62	0	-62	0	mono-exon	FALSE	NA	NA	NA	NA	NA	752	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGGTACAGGCGTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	43610923	43608482	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_-_43608500_43610900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061361	chr18	-	654	3	NNC	ENSMUSG00000024477.5	novel	1039	2	NA	NA	-3	5202	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	69	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGTCCTGCTGAATCC	NA	False	NA	NA	False	TTTAAA	-5	NA	46413900	46401355	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_-_46401733_46407652_46407776_46413746
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061398	chr18	-	431	1	ISM	ENSMUSG00000033022.9	ENSMUST00000035804.9	1595	5	14765	7	14399	4	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCCTTTTTGATGCACA	NA	False	NA	1	True	AATAAA	-23	NA	46846697	46846266	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr18_-_46846300_46846700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061404	chr18	-	1155	3	NNC	ENSMUSG00000033022.9	novel	1466	4	NA	NA	11367	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	72.5	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACATTGCCTTTTTGAT	NA	False	NA	-4	True	AATAAA	-18	NA	46849729	46846271	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_-_46847029_46848663_46848834_46849501
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061425	chr18	+	2255	5	NNC	ENSMUSG00000073568.3	novel	2257	5	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	125.025997296562	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTTTTCAGGGTTTCT	NA	False	NA	20	True	AATAAA	-16	NA	47054881	47067293	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_47054960_47059048_47059161_47059378_47059483_47061585_47061726_47065472
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061437	chr18	+	1598	7	FSM	ENSMUSG00000042705.10	ENSMUST00000049388.9	1610	7	17	-5	17	5	multi-exon	FALSE	canonical	3	1216	junction_3	103.11913282973	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTACAATGTTTTTATTTT	NA	False	NA	31	True	AATAAA	-32	NA	47091899	47221067	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47123545_47123657_47219318_47219379_47220094
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061443	chr18	+	1420	6	FSM	ENSMUSG00000042705.10	ENSMUST00000234280.2	600	6	-25	-795	-4	0	multi-exon	FALSE	canonical	3	187	junction_3	477.712298355401	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGCGTACAATGTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	47091916	47221062	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_47091996_47093482_47093574_47096726_47096838_47123545_47123657_47219318_47219379_47220094
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061457	chr18	+	1561	7	NNC	ENSMUSG00000042705.10	novel	1610	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	505.682926567847	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGCGTACAATGTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	47091927	47221062	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47123549_47123657_47219318_47219379_47220094
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061459	chr18	+	1561	7	NNC	ENSMUSG00000042705.10	novel	1610	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	522.900245426091	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGCGTACAATGTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	47091927	47221062	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_47091996_47093482_47093574_47096726_47096838_47100810_47100963_47123545_47123657_47219318_47219379_47220094
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061473	chr18	+	553	1	FSM	ENSMUSG00000117621.2	ENSMUST00000234633.2	515	1	-8	-30	-8	30	mono-exon	FALSE	NA	NA	NA	NA	NA	6562	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCACTATTATTTTGTGG	NA	False	NA	NA	False	AATAAA	-23	NA	47245197	47245750	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_47245200_47245800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061475	chr18	+	574	2	Intergenic	novelGene_198	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTGTGTAATGGTGT	NA	False	NA	NA	False	NA	NA	NA	47849666	47855945	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr18_+_47849693_47855397
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061479	chr18	+	549	1	Intergenic	novelGene_199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTGTGTAATGGTGT	NA	False	NA	NA	False	NA	NA	NA	47855396	47855945	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr18_+_47855400_47855900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061482	chr18	+	617	3	NNC	ENSMUSG00000118139.2	novel	700	3	NA	NA	-1066	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.5	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAAGTGTCTCCTCAGT	NA	False	NA	NA	False	NA	NA	NA	47865108	47878005	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_47865190_47866864_47867032_47877636
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061486	chr18	+	1780	1	FSM	ENSMUSG00000059040.6	ENSMUST00000235307.2	1747	1	-2	-31	-2	12	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGCTGTTACTATTTTAC	NA	False	NA	NA	False	NA	NA	NA	48179711	48181491	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_48179700_48181500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061491	chr18	-	409	1	Genic_Genomic	ENSMUSG00000024505.17	novel	NA	NA	NA	NA	37557	4	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTTTGTTGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	49829616	49829207	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr18_-_49829200_49829600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061509	chr18	+	2034	8	FSM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	-32	654	-32	-654	multi-exon	FALSE	canonical	3	351	junction_5	82.8179710360657	408	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGACTTATCTTTGCAG	NA	False	NA	14	True	AATAAA	-26	NA	52598732	52624349	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061521	chr18	+	2092	15	NNC	ENSMUSG00000034484.9	novel	2067	15	NA	NA	-19	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	254.699312515598	437	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTAGGGATCTTTTTTTAA	NA	False	NA	40	True	AATAAA	-20	NA	53309368	53353939	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_53309560_53322726_53322845_53327501_53327666_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351259_53351360_53351433_53353443
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061533	chr18	-	456	1	Genic_Genomic	ENSMUSG00000024538.9	novel	NA	NA	NA	NA	11329	1	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTGCAAGACTTTGT	NA	False	NA	-10	True	ATTAAA	-21	NA	53539858	53539402	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr18_-_53539400_53539900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061539	chr18	-	1227	4	NIC	ENSMUSG00000024538.9	novel	1403	5	NA	NA	82	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	180.261538388593	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTGCAAGACTTTG	NA	False	NA	-11	True	ATTAAA	-20	NA	53551105	53539403	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr18_-_53540138_53542196_53542382_53544577_53544692_53550911
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061541	chr18	-	1334	4	NNC	ENSMUSG00000024538.9	novel	1403	5	NA	NA	82	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	181.203384810181	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTGCAAGACTTTG	NA	False	NA	-11	True	ATTAAA	-20	NA	53551105	53539403	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_-_53540138_53542196_53542382_53544470_53544692_53550911
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061582	chr18	+	275	1	ISM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	14412	204	14412	-204	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCAGCTGTTACATTCA	NA	False	NA	NA	False	ATTAAA	-22	NA	56720305	56720580	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr18_+_56720300_56720600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061623	chr18	+	1110	6	NNC	ENSMUSG00000024594.10	novel	523	5	NA	NA	-12	378	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_4	427.566883656815	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTTTTTACTGTCATAA	NA	False	NA	NA	False	AATAAA	-37	NA	57506951	57522685	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_57507100_57507598_57507763_57514699_57514804_57517245_57517349_57521897_57522095_57522291
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061634	chr18	+	960	5	NNC	ENSMUSG00000024594.10	novel	523	5	NA	NA	-12	378	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	400.806062828396	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTTTTTACTGTCATAA	NA	False	NA	NA	False	AATAAA	-37	NA	57506951	57522685	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_57507156_57507598_57507763_57514699_57514804_57517245_57517340_57522291
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061640	chr18	+	973	5	NNC	ENSMUSG00000024594.10	novel	523	5	NA	NA	-12	378	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	400.806062828396	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTTTTTACTGTCATAA	NA	False	NA	NA	False	AATAAA	-37	NA	57506951	57522685	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_57507156_57507598_57507763_57514699_57514804_57517245_57517353_57522291
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061731	chr18	+	564	5	NNC	ENSMUSG00000024608.12	novel	597	5	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10943.7120616133	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTGGTGTTGTGT	NA	False	NA	68	True	AATAAA	-18	NA	60907716	60911618	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_60907759_60909472_60909624_60910001_60910180_60910884_60910962_60911502
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061742	chr18	+	526	5	NNC	ENSMUSG00000024608.12	novel	597	5	NA	NA	-18	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	10879.8799711899	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTGGTGTTGTGT	NA	False	NA	68	True	AATAAA	-18	NA	60907718	60911618	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_60907759_60909472_60909604_60910001_60910164_60910884_60910962_60911502
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061762	chr18	+	483	4	NNC	ENSMUSG00000024608.12	novel	597	5	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11898.2625902552	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTGGTGTTGTGT	NA	False	NA	68	True	AATAAA	-18	NA	60907720	60911618	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_60907759_60909472_60909624_60910001_60910180_60911502
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061786	chr18	+	555	6	NNC	ENSMUSG00000024608.12	novel	755	6	NA	NA	-14	51273	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	10470.3724556484	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGATGGTGGTGCCCGCCT	NA	False	NA	NA	False	NA	NA	NA	60907722	60962891	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_60907759_60909472_60909624_60910001_60910164_60910884_60910962_60911502_60911611_60962870
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061806	chr18	+	508	5	NNC	ENSMUSG00000024608.12	novel	597	5	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10943.7120616133	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTGGTGTTGTGT	NA	False	NA	68	True	AATAAA	-18	NA	60907724	60911618	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_60907759_60909472_60909624_60910001_60910164_60910916_60910962_60911502
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061854	chr18	-	436	1	NIC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	14837	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60947262	60946826	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr18_-_60946800_60947300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061869	chr18	-	720	1	ISM	ENSMUSG00000034320.15	ENSMUST00000146409.8	7814	4	13428	4546	2185	-243	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGTGGAAGTCTTTGTC	252	False	NA	NA	False	AAGAAA	-17	NA	61331256	61330536	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr18_-_61330500_61331300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061913	chr18	+	1659	1	Genic_Genomic	ENSMUSG00000024576.15	novel	NA	NA	NA	NA	5818	259	mono-exon	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAATGAGCCATGAAGAT	NA	False	NA	24	True	AATAAA	-22	NA	61721732	61723391	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr18_+_61721700_61723400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061942	chr18	+	737	3	FSM	ENSMUSG00000024578.4	ENSMUST00000025471.4	693	3	-39	-5	-19	5	multi-exon	FALSE	canonical	2	3	junction_1	1.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGGGCTTGTTCCTTTT	NA	False	NA	NA	False	AGTAAA	-26	NA	61820966	61825614	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_61821076_61823188_61823479_61825276
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061946	chr18	-	333	1	Genic_Genomic	ENSMUSG00000024579.8	novel	NA	NA	NA	NA	10445	1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGACTTATTCTTTTTT	NA	False	NA	0	True	TATAAA	-17	NA	61830239	61829906	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr18_-_61829900_61830200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000061991	chr18	+	505	1	ISM	ENSMUSG00000024581.14	ENSMUST00000025474.14	3567	12	21115	0	8970	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCAGTTTTATTTGCT	NA	False	NA	6	True	AATAAA	-18	NA	63132016	63132521	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr18_+_63132000_63132500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062029	chr18	+	212	1	Intergenic	novelGene_200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTCCTGCTGCCAGCTT	NA	False	NA	NA	False	NA	NA	NA	64461410	64461622	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr18_+_64461400_64461600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062032	chr18	-	1364	1	FSM	ENSMUSG00000060096.6	ENSMUST00000072796.6	1005	1	-327	-32	-327	32	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGACACACAGGAGGTG	NA	False	NA	NA	False	AAGAAA	-12	NA	64583087	64581723	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_-_64581700_64583100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062098	chr18	+	841	6	FSM	ENSMUSG00000024516.14	ENSMUST00000025394.14	860	6	1	18	1	1	multi-exon	FALSE	canonical	3	349	junction_3	14.5244621242922	725	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTTGTGGCCTCTGAT	NA	False	NA	NA	False	AATAAA	-22	NA	65933586	65950737	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_65933783_65942515_65942626_65945735_65945886_65947908_65948029_65949891_65949950_65950530
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062127	chr18	+	2660	3	FSM	ENSMUSG00000024521.9	ENSMUST00000025399.9	2727	3	62	5	2	-5	multi-exon	FALSE	canonical	3	99	junction_2	7	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCACTGGTCTTTCTGTGT	NA	False	NA	17	True	AATAAA	-29	NA	66591665	66598626	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_66591884_66593913_66594070_66596340
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062131	chr18	+	1046	1	ISM	ENSMUSG00000024521.9	ENSMUST00000025399.9	2727	3	5982	0	5922	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTCTTTCTGTGTGTTTT	NA	False	NA	22	True	AATAAA	-34	NA	66597585	66598631	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr18_+_66597600_66598600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062135	chr18	-	416	2	ISM	ENSMUSG00000118216.2	ENSMUST00000235553.2	671	3	15948	124	15934	-124	3prime_fragment	FALSE	canonical	3	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATGGAAGATCGAGAAGT	NA	False	NA	NA	False	NA	NA	NA	67067098	67059136	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr18_-_67059444_67066989
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062188	chr18	+	1395	1	ISM	ENSMUSG00000001473.8	ENSMUST00000001513.8	1758	4	10638	0	9088	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGGTCTCTTGAACTTC	NA	False	NA	12	True	AATAAA	-14	NA	67534424	67535819	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr18_+_67534400_67535800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062194	chr18	-	590	1	ISM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	43819	0	30595	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGTTGCCATGTTGTG	NA	False	NA	-2	True	AATAAA	-31	NA	67538423	67537833	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr18_-_67537800_67538400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062198	chr18	+	198	1	Intergenic	novelGene_201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACCAGTATGTTTACATT	NA	False	NA	NA	False	NA	NA	NA	67738704	67738902	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr18_+_67738700_67738900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062211	chr18	+	1018	6	NIC	ENSMUSG00000024537.6	novel	1059	7	NA	NA	1	19	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	169.713169789501	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTCTTTGAATCAGTTA	NA	False	NA	45	True	AATAAA	-31	NA	67774669	67787251	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr18_+_67774806_67777378_67777551_67781197_67781317_67781842_67782017_67786222_67786344_67786955
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062252	chr18	+	1675	8	FSM	ENSMUSG00000079614.5	ENSMUST00000237700.2	1684	8	21	-12	21	12	multi-exon	FALSE	canonical	3	1621	junction_6	144.078210053585	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGTGTGTGAAATGATT	NA	False	NA	NA	False	AATAAA	-23	NA	67908065	67925675	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062261	chr18	+	446	1	ISM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	18282	1884	18183	1010	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGAGTGGTAATGTGTT	NA	False	NA	11	True	AATAAA	-17	NA	67926227	67926673	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr18_+_67926200_67926700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062281	chr18	+	2076	11	FSM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	-5	2937	-5	9	multi-exon	FALSE	canonical	3	765	junction_7	139.06832852954	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGAGACTCTATAGACGA	NA	False	NA	96	True	AATAAA	-26	NA	68433420	68454986	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062285	chr18	+	1898	10	FSM	ENSMUSG00000009535.14	ENSMUST00000025427.14	1852	10	-43	-3	2	3	multi-exon	FALSE	canonical	3	60	junction_6	337.084266125157	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAATTCTGAGACTCTAT	NA	False	NA	90	True	AATAAA	-20	NA	68433427	68454980	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062303	chr18	+	667	3	NNC	ENSMUSG00000009535.14	novel	3791	3	NA	NA	184	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	550.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCAATTCTGAGACTCT	9922	False	NA	88	True	AATAAA	-18	NA	68452251	68454978	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_68452291_68453296_68453335_68454388
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062308	chr18	+	639	2	NNC	ENSMUSG00000009535.14	novel	3791	3	NA	NA	184	1	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCAATTCTGAGACTCT	9922	False	NA	88	True	AATAAA	-18	NA	68452251	68454978	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_68452301_68454388
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062315	chr18	+	592	1	ISM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	20963	2943	2321	3	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAATTCTGAGACTCTAT	NA	False	NA	90	True	AATAAA	-20	NA	68454388	68454980	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr18_+_68454400_68455000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062344	chr18	-	2434	10	FSM	ENSMUSG00000038425.19	ENSMUST00000043286.15	2591	10	156	1	-10	0	multi-exon	FALSE	canonical	3	102	junction_9	76.3322820564839	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGCTCTCACTGTAAG	NA	False	NA	-17	True	AATAAA	-18	NA	70663349	70641755	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70663258
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062352	chr18	+	576	2	ISM	ENSMUSG00000024513.17	ENSMUST00000128555.2	494	3	4841	-354	4841	0	3prime_fragment	FALSE	canonical	3	53	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGGAACTTCTTTTGTT	NA	False	NA	18	True	AATAAA	-18	NA	70755684	70759202	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr18_+_70755793_70758734
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062385	chr18	-	1756	7	FSM	ENSMUSG00000036223.17	ENSMUST00000177604.2	2605	7	-1	850	-1	330	multi-exon	FALSE	canonical	3	429	junction_6	32.9768437274131	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTACGTCTGGTTCCTTG	6725	False	NA	NA	False	NA	NA	NA	74340890	74329219	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340664
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062400	chr18	-	1249	7	NNC	ENSMUSG00000036223.17	novel	2630	7	NA	NA	0	-296	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_4	167.606433846278	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTCAAAACGTACTG	6765	False	NA	-17	True	AGTAAA	-18	NA	74340850	74329845	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335918_74337334_74337460_74339859_74339956_74340664
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062431	chr18	+	356	1	NIC	ENSMUSG00000036880.11	novel	1516	10	NA	NA	12470	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACCTTTTCTTGTTGGT	NA	False	NA	13	True	AATAAA	-17	NA	74938923	74939279	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr18_+_74938900_74939300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062438	chr18	+	1103	7	NNC	ENSMUSG00000062328.9	novel	1326	9	NA	NA	-88496	-106	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4310.47794784858	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCTGGTGGTCTTTAA	25	False	NA	33	True	AATAAA	-33	NA	75043132	75136345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_75043620_75134246_75134315_75134420_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136264
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062483	chr18	+	733	6	NIC	ENSMUSG00000062328.9	novel	775	7	NA	NA	45	-102	intron_retention	FALSE	canonical	3	6761	junction_1	2234.34863886548	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTGGTCTTTAATGAG	NA	False	NA	37	True	AATAAA	-37	NA	75133592	75136349	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr18_+_75133615_75134261_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136264
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062485	chr18	+	1125	5	NIC	ENSMUSG00000062328.9	novel	775	7	NA	NA	45	-102	intron_retention	FALSE	canonical	3	6761	junction_1	1793.50557568132	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTGGTCTTTAATGAG	NA	False	NA	37	True	AATAAA	-37	NA	75133592	75136349	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr18_+_75133615_75134261_75134315_75134420_75135194_75135731_75135924_75136264
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062487	chr18	+	1227	4	NIC	ENSMUSG00000062328.9	novel	775	7	NA	NA	45	-106	intron_retention	FALSE	canonical	3	6761	junction_1	1554.52465046036	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCTGGTGGTCTTTAA	NA	False	NA	33	True	AATAAA	-33	NA	75133592	75136345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr18_+_75133615_75134261_75135194_75135731_75135924_75136264
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062537	chr18	+	1181	3	NNC	ENSMUSG00000036299.6	novel	1266	3	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	390	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTGCTTTTTGTCTTTT	NA	False	NA	27	True	ATTAAA	-18	NA	75138936	75143005	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_75139285_75141721_75141898_75142348
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062573	chr18	+	349	1	Genic_Genomic	ENSMUSG00000035765.11	novel	NA	NA	NA	NA	161193	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGACTTATTTTTAAAC	NA	False	NA	20	True	AATAAA	-20	NA	75419688	75420037	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr18_+_75419700_75420000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062586	chr18	+	188	1	Intergenic	novelGene_202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACGAGGAAGTGAGTAT	NA	False	NA	NA	False	NA	NA	NA	76057712	76057900	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr18_+_76057700_76057900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062627	chr18	-	1567	6	NNC	ENSMUSG00000025420.14	novel	1674	14	NA	NA	14022	2	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	3.26190128606002	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGCTTTTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	77120917	77097734	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_-_77098742_77099679_77099801_77103697_77103741_77105156_77105324_77106880_77106952_77120759
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062652	chr18	+	792	1	ISM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	87527	274	86916	190	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGACTTTTTTTTTCCC	NA	False	NA	68	True	NA	NA	NA	77240430	77241222	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr18_+_77240400_77241200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062659	chr18	-	710	1	Genic_Genomic	ENSMUSG00000047466.11	novel	NA	NA	NA	NA	81740	9	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTCTGAGAATGTTTTC	NA	False	NA	1	True	AATAAA	-24	NA	77719893	77719183	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr18_-_77719200_77719900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062667	chr18	-	1274	2	FSM	ENSMUSG00000097666.3	ENSMUST00000180530.3	1269	2	-1	-4	-1	4	multi-exon	FALSE	canonical	2	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTCTTCTTTATTTTG	NA	False	NA	NA	False	NA	NA	NA	77820440	77817191	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_-_77818179_77820153
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062692	chr18	-	1004	9	NNC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	435.926312580464	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTTATCTGTTGCTC	NA	False	NA	0	True	AATACA	-20	NA	77855476	77845266	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_-_77845454_77846165_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77854563_77854739_77855419
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062694	chr18	-	906	9	NNC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_8	436.353569367778	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTTATCTGTTGCTC	NA	False	NA	0	True	AATACA	-20	NA	77855476	77845266	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77854563_77854645_77855419
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062718	chr18	+	2252	12	FSM	ENSMUSG00000025428.16	ENSMUST00000026495.15	2471	12	226	-7	-1	7	multi-exon	FALSE	canonical	3	5078	junction_4	224.265707226978	9852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGATGAGTCCCTGGCG	NA	False	NA	27	True	ATTAAA	-29	NA	77861654	77870576	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062722	chr18	+	2199	12	NNC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1577.87597581094	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGGTTGATGAGTC	NA	False	NA	20	True	ATTAAA	-22	NA	77861695	77870569	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869052_77869498_77869650_77870000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062723	chr18	+	2198	12	NNC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1586.70890746375	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGGTTGATGAGTC	NA	False	NA	20	True	ATTAAA	-22	NA	77861695	77870569	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_77861811_77863476_77863556_77865224_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062735	chr18	+	576	1	Genic_Genomic	ENSMUSG00000025428.16	novel	NA	NA	NA	NA	2466	4	mono-exon	FALSE	NA	NA	NA	NA	NA	1316	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTGATGAGTCCCTG	NA	False	NA	24	True	ATTAAA	-26	NA	77869997	77870573	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr18_+_77870000_77870600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062740	chr18	+	188	1	Intergenic	novelGene_203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGATATTATAATTCTAAA	NA	False	NA	NA	False	NA	NA	NA	77928844	77929032	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr18_+_77928800_77929000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062754	chr18	-	525	1	Genic_Genomic	ENSMUSG00000024570.8	novel	NA	NA	NA	NA	2418	4	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTGTATACGCACAATG	878	False	NA	1	True	AATAAA	-24	NA	80236000	80235475	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr18_-_80235500_80236000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062757	chr18	-	1381	6	FSM	ENSMUSG00000024570.8	ENSMUST00000025462.7	1377	6	0	-4	0	4	multi-exon	FALSE	canonical	3	236	junction_3	30.0026665481587	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTGTATACGCACAATG	NA	False	NA	1	True	AATAAA	-24	NA	80243873	80235475	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_-_80236098_80236446_80236515_80238233_80238319_80240464_80240578_80240878_80241099_80243600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062810	chr18	+	599	3	NIC	ENSMUSG00000057130.13	novel	4078	4	NA	NA	-17	193	combination_of_known_splicesites	FALSE	canonical	2	25	junction_2	1526	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGCTGTGCTTACTGCG	NA	False	NA	13	True	AATAAA	-21	NA	80250060	80265746	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr18_+_80250117_80250368_80250559_80265393
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062869	chr18	+	1980	6	FSM	ENSMUSG00000034006.18	ENSMUST00000091798.10	1989	6	1	8	0	0	multi-exon	FALSE	canonical	3	12	junction_3	14.1279864099595	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTCATGTGGTGTAAG	NA	False	NA	6	True	AATAAA	-39	NA	80299521	80335931	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_80299619_80299996_80300334_80306634_80306769_80315676_80315731_80326490_80326708_80334790
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062872	chr18	+	1284	2	NNC	ENSMUSG00000034006.18	novel	2080	8	NA	NA	24707	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTCATGTGGTGTAAG	NA	False	NA	6	True	AATAAA	-39	NA	80330761	80335931	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_80330905_80334790
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062877	chr18	+	381	3	Intergenic	novelGene_204	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCGGGTGTTTTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	81904980	81906256	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr18_+_81905082_81905178_81905259_81906056
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062885	chr18	+	1640	1	FSM	ENSMUSG00000058625.7	ENSMUST00000078739.7	1355	1	-105	-180	-105	180	mono-exon	FALSE	NA	NA	NA	NA	NA	499	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTGGTGCACCAACT	NA	False	NA	NA	False	AGTAAA	-42	NA	82356481	82358121	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_+_82356500_82358100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062918	chr18	-	2148	11	FSM	ENSMUSG00000024644.18	ENSMUST00000168419.3	2152	11	8	-4	8	0	multi-exon	FALSE	canonical	3	554	junction_9	38.6638073655454	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGTGGTCTGACTTTCT	NA	False	NA	2	True	AATAAA	-25	NA	84700176	84685589	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84696832_84696996_84699059_84699204_84699962
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062935	chr18	+	836	4	NNC	ENSMUSG00000024646.15	novel	833	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	473.452801824591	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGTCTGTTTGGTGT	NA	False	NA	19	True	AATATA	-24	NA	84869462	84897996	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr18_+_84869733_84889629_84889759_84891264_84891295_84897589
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062982	chr18	+	225	1	Genic_Genomic	ENSMUSG00000034391.13	novel	NA	NA	NA	NA	15744	5	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTCTTATTTTCTAA	NA	False	NA	31	True	AATAAA	-20	NA	84999378	84999603	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr18_+_84999400_84999600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000062988	chr18	-	1159	1	ISM	ENSMUSG00000056153.16	ENSMUST00000070116.12	6036	3	24669	3326	17684	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAAATTGTTGCCTTTT	6570	False	NA	-5	True	ATTAAA	-25	NA	88887777	88886618	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr18_-_88886600_88887800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063011	chr19	+	825	7	NNC	ENSMUSG00000024829.13	novel	802	7	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	693.182435502292	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGACTTGCTGTTAAA	7353	False	NA	13	True	NA	NA	NA	3333041	3341201	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_3333172_3334759_3334818_3335309_3335396_3336874_3337044_3337702_3337756_3338983_3339088_3340976
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063012	chr19	+	824	7	NNC	ENSMUSG00000024829.13	novel	802	7	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	702.209370487179	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGACTTGCTGTTAAA	7353	False	NA	13	True	NA	NA	NA	3333041	3341201	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_3333172_3334759_3334818_3335309_3335396_3336874_3337039_3337702_3337756_3338983_3339092_3340976
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063013	chr19	+	816	7	NNC	ENSMUSG00000024829.13	novel	802	7	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	691.573989775016	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGACTTGCTGTTAAA	7353	False	NA	13	True	NA	NA	NA	3333041	3341201	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_3333172_3334759_3334818_3335309_3335396_3336874_3337039_3337702_3337756_3338987_3339088_3340976
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063036	chr19	+	1609	1	Genic_Genomic	ENSMUSG00000024900.6	novel	NA	NA	NA	NA	7788	7	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTGTCTCCCTTGTCA	NA	False	NA	25	True	AATAAA	-27	NA	3434131	3435740	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr19_+_3434100_3435700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063043	chr19	-	1301	1	ISM	ENSMUSG00000024908.16	ENSMUST00000025846.16	4841	23	119492	0	14777	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	4667	False	NA	NA	False	AATAAA	-24	NA	3506228	3504927	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_-_3504900_3506200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063054	chr19	-	417	1	ISM	ENSMUSG00000024913.17	ENSMUST00000025856.17	5161	23	101312	0	30548	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCATTCCTTTGTGCCT	NA	False	NA	0	True	TATAAA	-20	NA	3635244	3634827	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_-_3634800_3635200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063059	chr19	-	204	1	Intergenic	novelGene_205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGTGTGGTGATGCACT	NA	False	NA	NA	False	NA	NA	NA	3638785	3638581	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr19_-_3638600_3638800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063076	chr19	+	2838	10	FSM	ENSMUSG00000045098.20	ENSMUST00000113970.8	2975	10	137	0	1	0	multi-exon	FALSE	canonical	3	179	junction_9	36.6093828625975	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTCTTGAGTCTGG	NA	False	NA	56	True	AATAAA	-15	NA	3818169	3858835	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916_3855054_3857224
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063090	chr19	-	988	7	FSM	ENSMUSG00000059734.8	ENSMUST00000075092.8	983	7	0	-5	0	1	multi-exon	FALSE	canonical	3	209	junction_6	645.480290601933	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGTGTTGTTCCATTTC	NA	False	NA	0	True	CATAAA	-23	NA	3962734	3958861	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962466
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063097	chr19	-	864	6	NIC	ENSMUSG00000059734.8	novel	780	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	1174	junction_5	317.835806667531	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTGTTGTTCCATTT	NA	False	NA	-1	True	CATAAA	-22	NA	3962782	3958862	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961747_3962709
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063104	chr19	-	752	7	NIC	ENSMUSG00000059734.8	novel	780	7	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	18	junction_5	700.55916159086	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTGTTGTTCCATTT	NA	False	NA	-1	True	CATAAA	-22	NA	3962761	3958862	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961598_3961688_3961747_3962709
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063120	chr19	-	214	1	NIC	ENSMUSG00000059734.8	novel	1005	7	NA	NA	3412	0	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTGTTGTTCCATTT	NA	False	NA	-1	True	CATAAA	-22	NA	3959076	3958862	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr19_-_3958900_3959100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063133	chr19	-	961	7	NNC	ENSMUSG00000059734.8	novel	983	7	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	829.507283472142	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTGTTGTGTTGTTCC	NA	False	NA	-5	True	CATAAA	-18	NA	3962717	3958866	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961570_3961617_3961688_3961747_3962466
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063181	chr19	-	1571	10	NNC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	-14	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	454.613497488543	35	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTGGAACTTTGCTT	6510	False	NA	0	True	AATAAA	-27	NA	4062722	4057499	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058804_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063219	chr19	-	756	7	NNC	ENSMUSG00000060803.7	novel	821	7	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1066.47482649876	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTCTTTGGTGCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	4087928	4085406	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_4085662_4085831_4085932_4086687_4086792_4087103_4087192_4087289_4087397_4087584_4087621_4087862
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063226	chr19	-	660	6	NIC	ENSMUSG00000060803.7	novel	821	7	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	16	junction_2	1498.76050121425	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTCTTTGGTGCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	4087928	4085406	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr19_-_4085662_4085823_4085932_4087103_4087192_4087289_4087397_4087584_4087621_4087862
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063268	chr19	-	905	7	NNC	ENSMUSG00000038155.12	novel	797	7	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	1286.70804121733	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTCTTTGGTGCCGTT	NA	False	NA	NA	False	AATAAA	-16	NA	4092237	4090284	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583_4091691_4091768_4091939_4092164
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063271	chr19	-	1209	5	ISM	ENSMUSG00000038155.12	ENSMUST00000042700.12	797	7	26	0	-19	0	intron_retention	FALSE	canonical	3	2023	junction_2	693.939658760039	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTCTTTGGTGCCGTT	NA	False	NA	NA	False	AATAAA	-16	NA	4092237	4090284	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063364	chr19	+	912	6	FSM	ENSMUSG00000024845.20	ENSMUST00000140405.10	874	6	-32	-6	-2	1	multi-exon	FALSE	canonical	3	163	junction_2	248.896283620306	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTTGCACTTTCCTGGG	4368	False	NA	NA	False	AATAAA	-22	NA	4175956	4181732	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_+_4176200_4177055_4177132_4177548_4177639_4177758_4177836_4181227_4181282_4181360
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063388	chr19	+	1871	11	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	4	1	combination_of_known_junctions	TRUE	canonical	3	159	junction_1	140.317354593079	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGACCTACTGTTGTGGA	3579	False	NA	19	True	AATAAA	-20	NA	4198621	4204035	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr19_+_4198722_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063435	chr19	+	1260	6	NIC	ENSMUSG00000040385.8	novel	1473	7	NA	NA	-13	0	combination_of_known_splicesites	TRUE	canonical	3	77	junction_1	1534.00737938251	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATAGCCTCTGTCTCTCTT	3358	False	NA	31	True	AATAAA	-20	NA	4242144	4245419	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr19_+_4242271_4243020_4243252_4243765_4243871_4244465_4244690_4244770_4244906_4244980
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063453	chr19	+	1383	7	NNC	ENSMUSG00000040385.8	novel	1473	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	1464.33459480938	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATAGCCTCTGTCTCTCTT	3371	False	NA	31	True	AATAAA	-20	NA	4242157	4245419	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_4242271_4242743_4242876_4243020_4243252_4243765_4243871_4244465_4244690_4244770_4244910_4244980
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063477	chr19	-	242	1	ISM	ENSMUSG00000024824.8	ENSMUST00000025740.8	2081	11	6199	0	4881	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGTGTTCCCCGTGAC	NA	False	NA	0	True	AATAAA	-15	NA	4245436	4245194	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_-_4245200_4245400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063492	chr19	+	930	4	FSM	ENSMUSG00000024854.5	ENSMUST00000025773.5	913	4	-17	0	-17	0	multi-exon	FALSE	canonical	3	47	junction_3	2.16024689946929	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGACCTTACATCTCTTA	NA	False	NA	6	True	AATAAA	-18	NA	4281935	4283688	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_+_4282243_4282516_4282607_4282801_4282914_4283267
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063506	chr19	-	340	1	Genic_Genomic	ENSMUSG00000045045.8	novel	NA	NA	NA	NA	3379	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGGTTTTTCGTCTCAT	NA	False	NA	1	True	AATAAA	-19	NA	4662151	4661811	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr19_-_4661800_4662200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063507	chr19	+	1838	7	ISM	ENSMUSG00000024892.18	ENSMUST00000113825.4	4044	20	24718	21	24656	-2	3prime_fragment	FALSE	canonical	3	90	junction_4	10.077477638554	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGTCATGTACAGTCT	NA	False	NA	8	True	AATAAA	-23	NA	4669091	4671705	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_4669227_4669347_4669598_4669807_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063510	chr19	+	547	1	ISM	ENSMUSG00000024892.18	ENSMUST00000068004.13	4148	21	110659	75	26723	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGTCATGTACAGTCT	NA	False	NA	8	True	AATAAA	-23	NA	4671158	4671705	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_4671200_4671700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063534	chr19	+	1811	4	FSM	ENSMUSG00000033760.18	ENSMUST00000036744.8	1783	4	-28	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	20.1163283594862	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTCTTAACTGAGTGGC	NA	False	NA	NA	False	AATAAA	-17	NA	4806570	4815968	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_+_4806690_4807273_4807698_4812004_4812676_4815371
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063557	chr19	-	1047	3	FSM	ENSMUSG00000094936.9	ENSMUST00000178615.8	1018	3	-29	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTATGTGTGCTTTGAGAA	NA	False	NA	-4	True	AATAAA	-16	NA	4843908	4835180	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_-_4835596_4842425_4842849_4843699
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063562	chr19	-	333	1	NIC	ENSMUSG00000094936.9	novel	2610	4	NA	NA	1437	-2014	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGATGGTCTAGAGGGGG	NA	False	NA	NA	False	AATAAA	-15	NA	4842442	4842109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr19_-_4842100_4842400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063567	chr19	-	316	1	ISM	ENSMUSG00000006456.11	ENSMUST00000006625.8	3165	3	10397	353	10275	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTGTCATTGTCTTGA	NA	False	NA	0	True	AATAAA	-27	NA	4851265	4850949	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_-_4850900_4851300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063590	chr19	-	1015	8	FSM	ENSMUSG00000034108.7	ENSMUST00000236451.2	984	8	-31	0	-14	0	multi-exon	FALSE	canonical	3	13	junction_5	206.828727330078	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTCTGTGTTCTT	NA	False	NA	-7	True	ATTAAA	-20	NA	4889329	4875393	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883547_4884221_4884339_4888858_4888932_4889224
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063591	chr19	-	920	8	FSM	ENSMUSG00000034108.7	ENSMUST00000236178.2	870	8	-50	0	9	0	multi-exon	FALSE	canonical	3	24	junction_5	202.991002112841	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTCTGTGTTCTT	NA	False	NA	-7	True	ATTAAA	-20	NA	4889351	4875393	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883476_4884267_4884339_4888858_4888932_4889224
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063655	chr19	+	453	1	ISM	ENSMUSG00000024891.7	ENSMUST00000236152.2	2619	12	7657	3	5340	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTCCTGGAGTGTTCACT	NA	False	NA	18	True	ATTAAA	-19	NA	5081544	5081997	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_5081500_5082000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063660	chr19	+	2034	2	FSM	ENSMUSG00000047379.8	ENSMUST00000053705.8	2032	2	0	-2	0	2	multi-exon	FALSE	canonical	3	75	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTCTGTTACTCTCCT	202	False	NA	11	True	AATAAA	-18	NA	5088853	5091161	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_+_5090061_5090334
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063675	chr19	+	487	1	ISM	ENSMUSG00000080268.5	ENSMUST00000116567.4	1388	10	8077	0	3310	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCTGATGTGTGGCTG	NA	False	NA	8	True	AATAAA	-19	NA	5099458	5099945	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_5099500_5099900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063685	chr19	-	597	3	NNC	ENSMUSG00000061451.14	novel	633	3	NA	NA	-372	7	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTTTCTCCCTTATCAA	NA	False	NA	-25	True	AATAAA	-15	NA	5122532	5120879	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_5121140_5121682_5121923_5122435
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063713	chr19	-	1251	1	ISM	ENSMUSG00000024870.7	ENSMUST00000025804.7	1913	6	6617	0	5790	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTGGTGACTGAGTGTGG	8118	False	NA	0	True	AATAAA	-43	NA	5150483	5149232	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_-_5149200_5150500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063717	chr19	-	1411	2	ISM	ENSMUSG00000024855.11	ENSMUST00000025786.9	4869	24	137929	528	8240	-528	3prime_fragment	FALSE	canonical	3	68	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTTGGGCTCCTGCCCC	NA	False	NA	-4	True	AATAAA	-19	NA	5185218	5183713	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_-_5185054_5185147
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063723	chr19	-	572	1	Genic_Genomic	ENSMUSG00000024853.11	novel	NA	NA	NA	NA	9908	3	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTAACTACTTGGATTT	NA	False	NA	-22	True	AATAAA	-21	NA	5324528	5323956	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr19_-_5324000_5324500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063734	chr19	-	848	5	ISM	ENSMUSG00000024853.11	ENSMUST00000235182.2	933	9	-41	3850	11	81	5prime_fragment	FALSE	canonical	3	1668	junction_1	98.2445927265211	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCTTTTGTTTTTTCTG	3877	False	NA	6	True	NA	NA	NA	5345472	5341150	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_-_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063739	chr19	-	525	2	FSM	ENSMUSG00000118263.2	ENSMUST00000235637.2	405	2	-115	-5	-115	2	multi-exon	FALSE	canonical	3	25	junction_1	0	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTTACTCTTTATTTAT	9085	False	NA	2	True	NA	NA	NA	5357559	5355900	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_-_5356162_5357295
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063768	chr19	-	622	2	NIC	ENSMUSG00000024844.16	novel	758	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	935	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGTTCTGTGTCAGAG	8986	False	NA	-6	True	AATAAA	-17	NA	5416391	5414665	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr19_-_5415187_5416290
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063770	chr19	-	758	3	NNC	ENSMUSG00000024844.16	novel	1261	3	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2294	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGTTCTGTGTCAGAG	8686	False	NA	-6	True	AATAAA	-17	NA	5416691	5414665	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_5415187_5415843_5415985_5416595
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063772	chr19	-	886	3	FSM	ENSMUSG00000024844.16	ENSMUST00000237167.2	732	3	-53	-101	-53	0	multi-exon	FALSE	canonical	3	736	junction_2	2653	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGTTCTGTGTCAGAG	8690	False	NA	-6	True	AATAAA	-17	NA	5416687	5414665	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_-_5415187_5415845_5415985_5416461
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063839	chr19	+	231	1	ISM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	3279	1276	2998	-1276	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTCTGAGTGGCTCTC	5071	False	NA	24	True	ATTAAA	-24	NA	5420047	5420278	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_5420000_5420300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063872	chr19	-	820	7	FSM	ENSMUSG00000024914.17	ENSMUST00000113674.8	939	7	138	-19	4	1	multi-exon	FALSE	canonical	3	65	junction_3	385.460655147405	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTTGGTTTCTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	5474811	5472835	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_-_5473054_5473358_5473448_5473587_5473703_5473799_5473920_5474209_5474304_5474388_5474462_5474700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063886	chr19	-	1041	1	FSM	ENSMUSG00000095098.3	ENSMUST00000179549.3	4715	1	315	3359	-75	-3354	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCCAGCTTGTGTCTA	5256	False	NA	0	True	AATAAA	-24	NA	5507607	5506566	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_-_5506600_5507600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063927	chr19	+	1470	3	NIC	ENSMUSG00000056201.9	novel	2354	4	NA	NA	5	4	intron_retention	FALSE	canonical	3	6173	junction_2	86.5	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTTGGGTTTGGGATT	NA	False	NA	16	True	NA	NA	NA	5540548	5544061	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr19_+_5540631_5542524_5543260_5543408
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063951	chr19	+	657	1	NIC	ENSMUSG00000056201.9	novel	2354	4	NA	NA	2814	6	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGGTTTGGGATTTT	NA	False	NA	18	True	NA	NA	NA	5543406	5544063	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr19_+_5543400_5544100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000063966	chr19	+	587	4	NNC	ENSMUSG00000024925.12	novel	1126	4	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	131.152159299376	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAGTCTGTGGGCACC	5055	False	NA	6	True	AATAAA	-15	NA	5651910	5652964	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_5652109_5652220_5652403_5652503_5652598_5652851
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064024	chr19	-	3180	1	FSM	ENSMUSG00002076852.1	ENSMUST00020181828.1	152	1	-1043	-1985	-1043	1985	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATTGTCATGGCTGTTA	9999	False	NA	-6	True	AATAAA	-21	NA	5895508	5892328	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_-_5892300_5895500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064043	chr19	-	1494	2	FSM	ENSMUSG00000045664.6	ENSMUST00000055458.6	3411	2	-2	1919	-2	-1919	multi-exon	FALSE	canonical	3	11	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGTCCCCTTGTCCCA	NA	False	NA	-7	True	AATAAA	-24	NA	5974846	5967582	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_-_5969022_5974791
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064081	chr19	-	313	1	NIC	ENSMUSG00000007338.11	novel	1764	4	NA	NA	2096	260	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGTGTCCACTTGAGAG	NA	False	NA	-6	True	CATAAA	-20	NA	6105013	6104700	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr19_-_6104700_6105000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064110	chr19	+	557	5	NNC	ENSMUSG00000038274.14	novel	613	5	NA	NA	-47	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5958.47091857466	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTTTTCTTCATTTGT	1033	False	NA	7	True	AATAAA	-19	NA	6107924	6109552	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_6108032_6108272_6108356_6108457_6108603_6109173_6109234_6109390
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064114	chr19	+	569	5	NNC	ENSMUSG00000038274.14	novel	613	5	NA	NA	-47	-2	at_least_one_novel_splicesite	FALSE	canonical	3	230	junction_2	5704.60675134579	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTTTTCTTCATTTGT	1033	False	NA	7	True	AATAAA	-19	NA	6107924	6109552	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_6108032_6108272_6108360_6108457_6108603_6109173_6109230_6109378
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064160	chr19	+	492	5	NNC	ENSMUSG00000038274.14	novel	613	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5958.47091857466	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATGTTTTCTTCATT	1089	False	NA	4	True	AATAAA	-16	NA	6107980	6109549	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_6108032_6108272_6108356_6108457_6108603_6109173_6109216_6109378
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064166	chr19	+	493	5	NNC	ENSMUSG00000038274.14	novel	508	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6935.97763026237	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCTTATGTTTTCTTCA	1089	False	NA	2	True	AATAAA	-14	NA	6107980	6109547	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_6108032_6108275_6108356_6108457_6108603_6109173_6109234_6109390
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064172	chr19	+	525	5	NNC	ENSMUSG00000038274.14	novel	503	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	7216.68665316709	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATGTTTTCTTCATT	1089	False	NA	4	True	AATAAA	-16	NA	6107980	6109549	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_6108032_6108257_6108356_6108457_6108603_6109173_6109234_6109378
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064192	chr19	+	1296	1	FSM	ENSMUSG00000075227.7	ENSMUST00000162726.5	1281	1	-10	-5	-10	5	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGCCTTTTCCGTAAAG	2523	False	NA	16	True	AATAAA	-27	NA	6111211	6112507	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_+_6111200_6112500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064302	chr19	+	189	1	Intergenic	novelGene_206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAAGCCGGGCGTGGTGG	1417	False	NA	NA	False	NA	NA	NA	6377965	6378154	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr19_+_6378000_6378200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064351	chr19	+	151	1	Genic_Genomic	ENSMUSG00000032946.17	novel	NA	NA	NA	NA	6672	11	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTGATGCTGTACTTCT	NA	False	NA	36	True	AATAAA	-38	NA	6465106	6465257	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr19_+_6465100_6465300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064374	chr19	-	1237	6	NNC	ENSMUSG00000024953.18	novel	1262	6	NA	NA	30	0	intron_retention	FALSE	canonical	0	0	junction_3	202.178139273266	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTACAGGGTTGTCT	NA	False	NA	-9	True	AATAAA	-21	NA	6887444	6884073	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_6884320_6884433_6884496_6884609_6884649_6884904_6885042_6885349_6885485_6886826
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064463	chr19	-	669	5	NNC	ENSMUSG00000056629.17	novel	642	6	NA	NA	25	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	300.455071516525	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCTGTATTTCTTTGT	NA	False	NA	1	True	TTTAAA	-39	NA	6957844	6955104	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_6955326_6955757_6955805_6955925_6956039_6956340_6956546_6957761
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064472	chr19	-	678	6	NNC	ENSMUSG00000056629.17	novel	642	6	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	277.876519339076	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGAGTCTGTATTTCTTT	NA	False	NA	-1	True	TTTAAA	-37	NA	6957811	6955106	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956577_6957761
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064474	chr19	-	685	7	NNC	ENSMUSG00000056629.17	novel	642	6	NA	NA	-22	2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	320.696637546036	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGAGTCTGTATTTCTTT	NA	False	NA	-1	True	TTTAAA	-37	NA	6957830	6955106	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956546_6956681_6956701_6957761
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064476	chr19	-	654	5	NNC	ENSMUSG00000056629.17	novel	642	6	NA	NA	-22	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	300.455071516525	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGAGTCTGTATTTCTTT	NA	False	NA	-1	True	TTTAAA	-37	NA	6957830	6955106	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_6955303_6955733_6955805_6955925_6956039_6956340_6956546_6957761
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064478	chr19	-	673	6	NNC	ENSMUSG00000056629.17	novel	1526	6	NA	NA	164	2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	275.879973901695	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGAGTCTGTATTTCTTT	NA	False	NA	-1	True	TTTAAA	-37	NA	6957454	6955106	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956546_6957378
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064490	chr19	-	571	6	NNC	ENSMUSG00000056629.17	novel	664	6	NA	NA	-22	2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	275.879973901695	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGAGTCTGTATTTCTTT	NA	False	NA	-1	True	TTTAAA	-37	NA	6957830	6955106	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956451_6957761
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064534	chr19	-	398	1	Genic_Genomic	ENSMUSG00000024962.14	novel	NA	NA	NA	NA	4271	1	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTTCTGTCATTGTT	9540	False	NA	0	True	GATAAA	-18	NA	6960237	6959839	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr19_-_6959800_6960200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064553	chr19	-	929	7	NNC	ENSMUSG00000024963.13	novel	840	6	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	canonical	3	13	junction_6	86.5653253650418	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9943	False	NA	-4	True	AATAAA	-17	NA	6969942	6965278	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_6965477_6965556_6965644_6966790_6966953_6967048_6967234_6968085_6968180_6969526_6969641_6969853
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064556	chr19	-	932	7	NNC	ENSMUSG00000024963.13	novel	1074	6	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_6	72.0819364026491	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9943	False	NA	-4	True	AATAAA	-17	NA	6969942	6965278	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_6965477_6965556_6965644_6966790_6966956_6967048_6967234_6968085_6968180_6969526_6969641_6969853
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064577	chr19	-	1088	6	FSM	ENSMUSG00000037349.10	ENSMUST00000041686.10	1000	6	-80	-8	0	8	multi-exon	FALSE	canonical	3	112	junction_2	17.04582060213	344	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTGCTGCTTTCCTAGG	6965	False	NA	5	True	AATAAA	-25	NA	6973485	6970377	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_-_6970571_6970800_6970895_6971029_6971128_6972038_6972138_6972609_6973104_6973375
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064599	chr19	-	2175	14	FSM	ENSMUSG00000024966.10	ENSMUST00000025918.9	2108	14	-59	-8	-59	8	multi-exon	FALSE	canonical	3	2912	junction_9	209.620169317304	1452	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGACTTTCTTCTCTT	3704	False	NA	0	True	AATAAA	-37	NA	7017394	6998061	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064634	chr19	-	1120	8	NNC	ENSMUSG00000024767.12	novel	1713	7	NA	NA	38	-636	at_least_one_novel_splicesite	TRUE	canonical	3	19	junction_5	519.525175678008	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGAGTGTGCGCTTCCCT	NA	False	NA	-7	True	ATTAAA	-18	NA	7183643	7176210	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_7176605_7176736_7176932_7177027_7177113_7177307_7177427_7181149_7181239_7181422_7181522_7181754_7181817_7183566
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064657	chr19	-	516	2	NNC	ENSMUSG00000035885.6	novel	550	2	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	58	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCATGTCCTTCTGCAC	7394	False	NA	NA	False	AATAAA	-26	NA	7194953	7192517	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_7192850_7194769
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064691	chr19	+	276	1	Genic_Genomic	ENSMUSG00000024968.15	novel	NA	NA	NA	NA	4001	3	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCCATGTGTGCTGTGG	NA	False	NA	25	True	AATAAA	-20	NA	7252317	7252593	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr19_+_7252300_7252600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064721	chr19	+	686	1	ISM	ENSMUSG00000024759.15	ENSMUST00000170373.9	7540	13	40243	4706	39748	768	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGTTTGAATGAACCAT	NA	False	NA	NA	False	AATAAA	-24	NA	7511647	7512333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_7511600_7512300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064773	chr19	-	1894	9	NNC	ENSMUSG00000010095.14	novel	1819	9	NA	NA	-27	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1031.99464024771	91	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGACTTTCATCCTTC	NA	False	NA	-1	True	AATAAA	-22	NA	8691270	8684930	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_8685459_8685557_8685642_8686368_8686510_8686595_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064776	chr19	-	1858	9	NNC	ENSMUSG00000010095.14	novel	1819	9	NA	NA	7	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1032.78552347523	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGACTTTCATCCTTC	NA	False	NA	-1	True	AATAAA	-22	NA	8691236	8684930	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687144_8689197_8689293_8690093_8690268_8690705
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064817	chr19	+	598	9	NNC	ENSMUSG00000108414.2	novel	605	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	365.157414685776	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8700847	8703807	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_8700871_8701504_8701554_8701766_8701848_8702035_8702086_8702377_8702448_8702848_8702888_8703145_8703191_8703430_8703467_8703602
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064823	chr19	+	589	9	NNC	ENSMUSG00000108414.2	novel	605	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	369.500253721158	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8700850	8703807	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_8700871_8701504_8701554_8701766_8701848_8702035_8702086_8702556_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064841	chr19	+	602	8	NNC	ENSMUSG00000108414.2	novel	709	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	466.733153669946	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8701503	8703807	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_8701554_8701740_8701848_8702035_8702086_8702377_8702411_8702811_8702888_8703145_8703191_8703430_8703467_8703602
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064844	chr19	+	561	7	NNC	ENSMUSG00000108414.2	novel	709	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	436.709285452004	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8701503	8703807	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702811_8702888_8703145_8703212_8703602
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064847	chr19	+	568	9	NNC	ENSMUSG00000108414.2	novel	709	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_8	337.992880842186	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8701503	8703807	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703608
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064848	chr19	+	580	8	NNC	ENSMUSG00000108414.2	novel	709	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	365.206790736426	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8701503	8703807	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_8701554_8701766_8701848_8702035_8702086_8702377_8702415_8702811_8702888_8703145_8703191_8703430_8703467_8703602
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064851	chr19	+	563	8	NNC	ENSMUSG00000108414.2	novel	709	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	365.206790736426	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8701503	8703807	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_8701554_8701766_8701848_8702035_8702086_8702377_8702435_8702848_8702888_8703145_8703191_8703430_8703467_8703602
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064863	chr19	+	556	6	NNC	ENSMUSG00000108414.2	novel	709	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	450.422201939469	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8701503	8703807	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_8701554_8701766_8701848_8702035_8702098_8702795_8702888_8703145_8703212_8703602
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064877	chr19	+	578	9	NNC	ENSMUSG00000108414.2	novel	709	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	346.176955291654	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8701503	8703807	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_8701558_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064884	chr19	+	542	4	ISM	ENSMUSG00000108414.2	ENSMUST00000206255.2	478	5	164	0	164	0	3prime_fragment	FALSE	canonical	3	1057	junction_3	47.4622657135821	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8702631	8703807	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_8702888_8703145_8703191_8703430_8703467_8703602
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064885	chr19	+	918	2	ISM	ENSMUSG00000108414.2	ENSMUST00000206255.2	478	5	164	0	164	0	intron_retention	FALSE	canonical	3	1086	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8702631	8703807	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_8702888_8703145
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064891	chr19	+	1178	1	FSM	ENSMUSG00000065087.3	ENSMUST00000083153.3	126	1	-598	-454	-598	454	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGATGGCTTATTTGA	NA	False	NA	28	True	AATAAA	-17	NA	8702631	8703809	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_+_8702600_8703800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064912	chr19	+	1303	10	NIC	ENSMUSG00000042729.12	novel	1204	11	NA	NA	-5	0	intron_retention	FALSE	canonical	3	1012	junction_7	81.959038248489	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGACCTTTTGTGATGG	958	False	NA	28	True	AATAAA	-21	NA	8713185	8717988	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr19_+_8713270_8713350_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064919	chr19	+	1068	10	NNC	ENSMUSG00000042729.12	novel	1078	11	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	361.550911668599	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCCTGGACCTTTTGTG	965	False	NA	24	True	AATAAA	-17	NA	8713192	8717984	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_8713270_8713350_8713458_8713539_8713662_8715017_8715099_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000064954	chr19	+	720	2	NNC	ENSMUSG00000117924.2	novel	748	2	NA	NA	7	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGCCTACTTAAGCCAT	6526	False	NA	NA	False	AATAAA	-20	NA	8748366	8749821	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_8748680_8749414
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065041	chr19	-	892	7	NNC	ENSMUSG00000071662.5	novel	890	8	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	533.57622073452	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTTGGTTTTATGT	NA	False	NA	-1	True	ATTAAA	-17	NA	8775945	8770490	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_8770769_8771467_8771572_8771665_8771732_8771843_8771895_8774599_8774760_8775587_8775698_8775822
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065083	chr19	+	430	1	ISM	ENSMUSG00000071659.5	ENSMUST00000096753.5	5118	14	11637	2067	11375	-2067	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTTGTATTTTCTTTACC	6165	False	NA	25	True	AATAAA	-35	NA	8809010	8809440	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_8809000_8809400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065085	chr19	+	337	1	ISM	ENSMUSG00000071659.5	ENSMUST00000096753.5	5118	14	13797	0	13535	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTATCTCCTGTGGCT	8325	False	NA	15	True	AATAAA	-18	NA	8811170	8811507	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_8811200_8811500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065101	chr19	-	786	3	NNC	ENSMUSG00000071658.6	novel	1643	3	NA	NA	-16	-877	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	94.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAACGTCTGTGTTAGCG	4746	False	NA	-4	True	AATAAA	-19	NA	8816574	8815173	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_8815636_8815913_8816018_8816354
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065108	chr19	+	1373	11	FSM	ENSMUSG00000071657.13	ENSMUST00000086058.13	1388	11	16	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_6	60.1671837466239	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTGTGGACATCCG	NA	False	NA	14	True	AATAAA	-14	NA	8817898	8826031	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_+_8817933_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065109	chr19	+	1367	11	NNC	ENSMUSG00000071657.13	novel	1388	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	67.9826448441071	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTGTGGACATCCG	NA	False	NA	14	True	AATAAA	-14	NA	8817898	8826031	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_8817933_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825520_8825827
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065169	chr19	-	389	1	FSM	ENSMUSG00000070167.3	ENSMUST00000093658.3	148	1	-87	-154	-87	154	mono-exon	FALSE	NA	NA	NA	NA	NA	348	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTTCGCTACCTTTT	NA	False	NA	-35	True	AATAAA	-19	NA	8866136	8865747	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_-_8865700_8866100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065184	chr19	+	645	4	NNC	ENSMUSG00000071653.10	novel	806	4	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	1555.1163586333	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGATGAAGTGCAGCAGGG	NA	False	NA	32	True	AATAAA	-21	NA	8866246	8868110	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_8866329_8866487_8866617_8867366_8867465_8867774
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065239	chr19	+	1363	10	ISM	ENSMUSG00000071647.6	ENSMUST00000224272.2	2978	22	7309	0	-1099	0	3prime_fragment	FALSE	canonical	3	44	junction_1	12.6031546119549	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGTGCTTTTGTGCG	9565	False	NA	6	True	AATAAA	-14	NA	8914565	8918946	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065268	chr19	+	1458	10	NNC	ENSMUSG00000071644.11	novel	1864	10	NA	NA	117	-297	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	2992.1108037184	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCTGTCCTGCCTCC	960	False	NA	13	True	ATTAAA	-18	NA	8944521	8955546	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950481_8954681_8954855_8954948_8955074_8955307
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065301	chr19	+	1411	10	NNC	ENSMUSG00000071644.11	novel	1864	10	NA	NA	153	-297	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2996.34453012498	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCTGTCCTGCCTCC	996	False	NA	13	True	ATTAAA	-18	NA	8944557	8955546	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_8944590_8945579_8945743_8946532_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065303	chr19	+	1399	10	NNC	ENSMUSG00000071644.11	novel	1864	10	NA	NA	153	-297	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2989.51105048763	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCTGTCCTGCCTCC	996	False	NA	13	True	ATTAAA	-18	NA	8944557	8955546	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950282_8950473_8954681_8954855_8954948_8955074_8955307
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065311	chr19	+	1402	10	NNC	ENSMUSG00000071644.11	novel	1864	10	NA	NA	154	-297	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2928.14560624263	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCTGTCCTGCCTCC	997	False	NA	13	True	ATTAAA	-18	NA	8944558	8955546	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954959_8955074_8955307
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065335	chr19	+	1098	6	FSM	ENSMUSG00000069833.14	ENSMUST00000092955.11	830	6	-44	-224	-33	24	multi-exon	FALSE	canonical	3	34	junction_5	17.6703140888893	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTTGCGTACTTATTT	NA	False	NA	37	True	AATAAA	-38	NA	8966614	9054302	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_9014522_9014623_9053939
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065349	chr19	-	645	1	ISM	ENSMUSG00000024654.9	ENSMUST00000049948.6	4195	7	22955	2169	22850	-2169	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGGTTAGGTGTCACT	NA	False	NA	NA	False	AATAAA	-21	NA	9090045	9089400	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_-_9089400_9090000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065352	chr19	-	188	1	ISM	ENSMUSG00000024654.9	ENSMUST00000049948.6	4195	7	22521	3060	22416	-3060	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCAGTCTGTCCCTCCTTTT	NA	False	NA	1	True	NA	NA	NA	9090479	9090291	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_-_9090300_9090500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065362	chr19	+	686	1	FSM	ENSMUSG00000117804.2	ENSMUST00000236432.2	580	1	-38	-68	-38	68	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGATTTTCAACTTAAAG	NA	False	NA	NA	False	NA	NA	NA	9193706	9194392	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_+_9193700_9194400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065411	chr19	+	1197	2	ISM	ENSMUSG00000024661.8	ENSMUST00000025563.8	929	4	55	4	-3	1	intron_retention	FALSE	canonical	3	5824	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTCTTTGTGATTGA	4924	False	NA	19	True	AATAAA	-17	NA	9960064	9962458	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_9960348_9961544
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065453	chr19	+	679	1	ISM	ENSMUSG00000010663.6	ENSMUST00000010807.6	3460	12	13308	0	2877	0	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10173559	10174238	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_10173600_10174200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065457	chr19	-	2108	2	FSM	ENSMUSG00000024742.16	ENSMUST00000116542.9	2100	2	-2	-6	-2	0	multi-exon	FALSE	canonical	3	443	junction_1	0	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTCTGAATGTTTGAAAA	2153	False	NA	NA	False	AATAAA	-20	NA	10181309	10176495	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_-_10178462_10181167
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065489	chr19	+	398	4	NNC	ENSMUSG00000036372.15	novel	606	4	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1669.4562654416	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGCCTCATGTCCATTC	4173	False	NA	27	True	AATAAA	-16	NA	10181573	10185182	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_10181629_10183787_10183898_10184527_10184674_10185095
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065528	chr19	+	491	4	NNC	ENSMUSG00000036372.15	novel	606	4	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	1714.97022973837	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGCCTCATGTCCATTC	4192	False	NA	27	True	AATAAA	-16	NA	10181592	10185182	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_10181735_10183787_10183898_10184527_10184665_10185080
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065557	chr19	-	897	6	NIC	ENSMUSG00000024667.13	novel	876	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	28.4717403753266	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGGTTGATTTTCTCCT	NA	False	NA	-3	True	AATAAA	-17	NA	10533120	10527824	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr19_-_10528184_10528321_10528405_10529136_10529339_10531892_10531986_10532426_10532529_10533062
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065586	chr19	+	784	2	ISM	ENSMUSG00000024740.11	ENSMUST00000236279.2	1279	4	1906	-488	1906	3	3prime_fragment	FALSE	canonical	3	3370	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	183	False	NA	59	True	AATAAA	-19	NA	10605872	10607186	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_10605913_10606442
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065613	chr19	+	2176	16	FSM	ENSMUSG00000024735.14	ENSMUST00000179297.3	6035	16	-168	4027	15	0	multi-exon	FALSE	canonical	3	14	junction_3	36.1106940146852	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCAGCTTCTTGTGTCTG	NA	False	NA	15	True	ATTAAA	-21	NA	10872609	10882896	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_+_10872833_10874866_10875017_10875180_10875258_10876289_10876489_10876568_10876643_10876733_10876797_10877538_10877581_10877687_10877763_10878053_10878130_10878290_10878401_10879707_10879864_10880065_10880136_10880331_10880418_10880654_10880826_10881001_10881108_10882398
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065641	chr19	+	177	1	Intergenic	novelGene_207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTTAAAAAAAAGAATA	2070	False	NA	3	True	NA	NA	NA	11915199	11915376	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr19_+_11915200_11915400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065644	chr19	+	1811	3	ISM	ENSMUSG00000046139.9	ENSMUST00000061618.9	4216	19	30301	121	30257	-121	3prime_fragment	FALSE	canonical	3	277	junction_1	2	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTTATACCTTTCT	6934	False	NA	7	True	AATAAA	-21	NA	11920063	11922334	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_11920085_11920188_11920339_11920694
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065672	chr19	-	420	1	Intergenic	novelGene_208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGCTACATTCTCAACT	NA	False	NA	NA	False	AGTAAA	-28	NA	15881040	15880620	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr19_-_15880600_15881000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065678	chr19	-	1030	1	NIC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	3559	3	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCCTGTGAATTATTCT	NA	False	NA	-11	True	ATTAAA	-23	NA	15883517	15882487	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr19_-_15882500_15883500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065714	chr19	+	538	4	NNC	ENSMUSG00000039126.11	novel	1803	9	NA	NA	0	-10724	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	44.3045019031801	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTCCTGTCTGTTATT	NA	False	NA	NA	False	NA	NA	NA	17114129	17160443	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_17114256_17145626_17145707_17156153_17156355_17160312
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065754	chr19	+	611	1	ISM	ENSMUSG00000024726.11	ENSMUST00000025632.11	4518	8	33415	2411	32850	567	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTTCGAATTAGAAATTA	300	False	NA	NA	False	AATAAA	-21	NA	18681542	18682153	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_18681500_18682200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065760	chr19	+	1107	1	Genic_Genomic	ENSMUSG00000047044.8	novel	NA	NA	NA	NA	4087	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGTATCAGTGACTAAT	NA	False	NA	27	True	AATAAA	-20	NA	18694686	18695793	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr19_+_18694700_18695800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065768	chr19	+	1983	5	ISM	ENSMUSG00000024750.12	ENSMUST00000025659.12	2467	6	3304	263	510	-263	3prime_fragment	FALSE	canonical	3	378	junction_4	0.707106781186548	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTCTTGTTTATTGGGTT	NA	False	NA	18	True	AATAAA	-18	NA	21253913	21259391	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_21253950_21254341_21254454_21255018_21255123_21256988_21257115_21257786
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065784	chr19	-	1745	2	NNC	ENSMUSG00000035171.10	novel	1614	4	NA	NA	-138243	0	intron_retention	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTCTTGTTGTTGT	NA	False	NA	NA	False	AATAAA	-21	NA	21768583	21574675	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_21576233_21768395
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065791	chr19	-	1165	3	NIC	ENSMUSG00000035171.10	novel	942	3	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	90	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTGTGTCTTGTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	21581683	21574678	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr19_-_21575699_21576118_21576233_21581652
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065810	chr19	-	694	1	Intergenic	novelGene_209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	22700529	22699835	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr19_-_22699800_22700500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065811	chr19	+	2554	2	Intergenic	novelGene_210	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	3428	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATCGCATAACTGTCTCT	1177	False	NA	NA	False	NA	NA	NA	22699835	22702603	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr19_+_22700550_22700763
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065821	chr19	+	155	1	Intergenic	novelGene_211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGATGTC	NA	False	NA	NA	False	NA	NA	NA	23060425	23060580	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr19_+_23060400_23060600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065824	chr19	+	525	3	Intergenic	novelGene_212	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACTAGCACAGAGAGTCA	NA	False	NA	NA	False	NA	NA	NA	23074244	23098708	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr19_+_23074363_23095699_23095831_23098432
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065843	chr19	+	742	1	ISM	ENSMUSG00000033863.3	ENSMUST00000036884.3	4486	2	23973	2194	21555	469	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTTTGAATTCCCC	874	False	NA	NA	False	TTTAAA	-35	NA	23142562	23143304	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_23142600_23143300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065852	chr19	-	2423	18	NNC	ENSMUSG00000024943.10	novel	3448	24	NA	NA	6340	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	114.071124537664	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAGATTGGTTATTTTT	NA	False	NA	-4	True	AATAAA	-21	NA	23234890	23186094	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216244_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065853	chr19	-	2420	18	NNC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	6340	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	112.473264797096	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAGATTGGTTATTTTT	NA	False	NA	-4	True	AATAAA	-21	NA	23234890	23186094	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216244_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065871	chr19	+	869	2	Genic_Genomic	ENSMUSG00000051255.7	novel	633	1	NA	NA	-29	276	multi-exon	FALSE	canonical	3	409	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCAGAATGCTCACACAG	NA	False	NA	NA	False	NA	NA	NA	23653182	23654120	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr19_+_23653644_23653712
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065875	chr19	+	936	1	FSM	ENSMUSG00000051255.7	ENSMUST00000056396.7	633	1	-29	-274	-29	274	mono-exon	FALSE	NA	NA	NA	NA	NA	381	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGATCAGAATGCTCACAC	NA	False	NA	NA	False	NA	NA	NA	23653182	23654118	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_+_23653200_23654100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065884	chr19	-	593	5	Intergenic	novelGene_213	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_3	5.40254569624358	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCCCTACAGTCATACA	NA	False	NA	NA	False	AATAAA	-39	NA	23934096	23884646	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr19_-_23885008_23885116_23885214_23894351_23894383_23932923_23932974_23934042
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065922	chr19	+	481	1	Intergenic	novelGene_214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	930	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCATGTAAATTATAGATG	5835	False	NA	NA	False	NA	NA	NA	25010493	25010974	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr19_+_25010500_25011000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065935	chr19	+	420	1	ISM	ENSMUSG00000042372.6	ENSMUST00000048935.6	2391	2	12965	0	12965	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTGATGTCTTTTCT	1370	False	NA	17	True	AATAAA	-13	NA	25600865	25601285	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_25600900_25601300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065951	chr19	-	268	1	NIC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	9067	8	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGGTTTAATGTCAACT	NA	False	NA	-9	True	TATAAA	-18	NA	27367720	27367452	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr19_-_27367500_27367700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000065980	chr19	+	702	2	FSM	ENSMUSG00000118038.2	ENSMUST00000235636.2	618	2	-65	-19	-65	19	multi-exon	FALSE	canonical	2	3	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTATTAGCTGGCTAGA	NA	False	NA	NA	False	NA	NA	NA	29044681	29046922	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_+_29044983_29046521
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066000	chr19	+	630	1	ISM	ENSMUSG00000024785.8	ENSMUST00000235900.2	1884	9	41847	78	41847	8	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAGTGTAAATCAGAGTA	NA	False	NA	35	True	CATAAA	-27	NA	29120621	29121251	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_29120600_29121300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066010	chr19	-	809	2	FSM	ENSMUSG00000039097.6	ENSMUST00000044143.6	745	2	20	-84	20	84	multi-exon	FALSE	canonical	1	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCCTTTTAATGGTCT	NA	False	NA	NA	False	NA	NA	NA	29312050	29309022	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_-_29309567_29311785
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066018	chr19	-	687	5	NIC	ENSMUSG00000016495.13	novel	1020	6	NA	NA	-24	6	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	17.4212513901843	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGGCAGTATTCTAAACA	NA	False	NA	-99	True	AATAAA	-21	NA	29339248	29326098	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr19_-_29326406_29327759_29327870_29328443_29328575_29335716_29335804_29339196
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066050	chr19	-	235	2	Intergenic	novelGene_215	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGGTAGTGACCCGCCG	NA	False	NA	NA	False	NA	NA	NA	29995597	29995267	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr19_-_29995359_29995453
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066052	chr19	+	2059	10	NNC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	-434	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	86.7313149194356	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGCATCCAGCTTTACTT	NA	False	NA	29	True	AATAAA	-19	NA	30055469	30071126	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065980_30066585_30066744_30069440_30069540_30070117
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066054	chr19	+	805	1	Genic_Genomic	ENSMUSG00000024817.14	novel	NA	NA	NA	NA	964	7	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCATCCAGCTTTACTTATT	9942	False	NA	32	True	AATAAA	-22	NA	30070324	30071129	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr19_+_30070300_30071100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066087	chr19	-	635	2	Genic_Genomic	ENSMUSG00000062456.5	novel	714	1	NA	NA	2	4	multi-exon	FALSE	canonical	2	223	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAGTAAAAATGTGTAGC	NA	False	NA	NA	False	AATAAA	-39	NA	32443976	32443260	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr19_-_32443480_32443560
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066120	chr19	+	489	1	ISM	ENSMUSG00000013663.8	ENSMUST00000013807.8	8292	9	65319	2856	11591	-2856	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTCTCATTCTTGTCA	158	False	NA	NA	False	TATAAA	-17	NA	32800215	32800704	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_32800200_32800700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066130	chr19	-	539	2	NIC	ENSMUSG00000024774.17	novel	2846	6	NA	NA	-12	-26059	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATGAATTAATACATATA	NA	False	NA	NA	False	AATAAA	-23	NA	34132329	34126383	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr19_-_34126808_34132214
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066153	chr19	+	1165	11	NNC	ENSMUSG00000024800.9	novel	1145	11	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	313.56863682454	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGGATTTTTAAATTTT	NA	False	NA	NA	False	AATAAA	-22	NA	36061103	36082173	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071863_36077571_36077689_36078208_36078239_36078633_36078672_36079220_36079301_36081735
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066181	chr19	+	744	3	NNC	ENSMUSG00000118032.2	novel	602	2	NA	NA	-16253	59	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCTGACTCTCTTTCAT	NA	False	NA	NA	False	NA	NA	NA	36212873	36233795	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_36212985_36219029_36219176_36233308
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066190	chr19	+	1600	10	FSM	ENSMUSG00000024805.17	ENSMUST00000225411.2	1626	10	35	-9	35	-3	multi-exon	FALSE	canonical	3	44	junction_8	28.4843470118477	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAATGCCAGCTTATTC	NA	False	NA	3	True	AATAAA	-15	NA	36387182	36433601	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36427963_36428024_36433020
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066201	chr19	+	2672	5	ISM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	51253	588	4912	-588	3prime_fragment	FALSE	canonical	3	888	junction_3	109.879479430875	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGGTAATTCATTGAAAT	NA	False	NA	34	True	AATAAA	-23	NA	36862884	36870289	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066254	chr19	+	1712	4	FSM	ENSMUSG00000024986.13	ENSMUST00000025944.9	1802	4	31	59	31	0	multi-exon	FALSE	canonical	3	34	junction_1	4.18993502999218	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCCTGTTTGAATTCTCA	NA	False	NA	20	True	AATGAA	-33	NA	37423288	37429120	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_+_37423682_37425636_37425816_37426014_37426066_37428031
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066260	chr19	+	819	5	ISM	ENSMUSG00000053799.9	ENSMUST00000238817.2	2692	22	58565	2	58565	-2	3prime_fragment	TRUE	canonical	3	79	junction_1	9.2736184954957	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTCTGCTTGCATTTT	NA	False	NA	NA	False	AATAAA	-36	NA	37597471	37671701	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_37597554_37628069_37628212_37641830_37641905_37670107_37670221_37671293
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066266	chr19	-	379	1	ISM	ENSMUSG00000048612.17	ENSMUST00000172095.3	7094	53	143967	196	1893	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGATGTTTGTCCTCT	NA	False	NA	-5	True	AATAAA	-16	NA	37888058	37887679	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_-_37887700_37888100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066275	chr19	+	2467	10	FSM	ENSMUSG00000024989.16	ENSMUST00000236044.2	2442	10	-26	1	0	1	multi-exon	FALSE	canonical	3	35	junction_2	104.602716958317	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	38043458	38062870	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_+_38043530_38045857_38045929_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066276	chr19	+	2531	10	NIC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	113	junction_2	84.0640555296898	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTAGTATGTGTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	38043458	38062872	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr19_+_38043530_38045857_38045991_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066325	chr19	+	739	3	Intergenic	novelGene_216	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	6.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGACAGCTGTAGATTTTG	NA	False	NA	NA	False	NA	NA	NA	38337129	38338203	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr19_+_38337292_38337531_38337604_38337698
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066344	chr19	+	3099	22	FSM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	-2	2771	-2	-2771	multi-exon	TRUE	canonical	3	1554	junction_5	143.18806117019	604	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCACATTATTTTTTC	NA	False	NA	17	True	AATAAA	-18	NA	38919356	38956724	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066380	chr19	+	191	1	Intergenic	novelGene_217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTGGGGCCATAACTCAG	NA	False	NA	NA	False	TATAAA	-3	NA	40261490	40261681	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr19_+_40261500_40261700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066391	chr19	-	795	6	NIC	ENSMUSG00000025007.14	novel	2493	16	NA	NA	0	110	combination_of_known_junctions	FALSE	canonical	3	88	junction_5	469.888752791552	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGATCTTCAGGGGGTA	NA	False	NA	NA	False	NA	NA	NA	40576826	40562677	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr19_-_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40576753
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066434	chr19	-	598	4	ISM	ENSMUSG00000025154.16	ENSMUST00000177495.2	1652	12	-8	16607	-8	-16607	5prime_fragment	FALSE	canonical	3	356	junction_2	45.8475735453906	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTGACCCATAAACATTT	4519	False	NA	NA	False	NA	NA	NA	41790494	41775039	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_-_41775207_41776744_41776826_41780185_41780452_41790410
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066546	chr19	+	2587	12	FSM	ENSMUSG00000018820.14	ENSMUST00000099443.11	2573	12	-13	-1	-13	1	multi-exon	FALSE	canonical	3	55	junction_1	33.3877792261314	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTGTCAGGTCTCCTA	NA	False	NA	8	True	AATAAA	-15	NA	42159019	42180157	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_+_42159108_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178043_42178821
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066565	chr19	-	343	1	Intergenic	novelGene_218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCCGCCCCGAAAAAAAAAA	NA	False	NA	-23	True	AATAAA	-16	NA	42367392	42367049	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr19_-_42367000_42367400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066612	chr19	-	1506	2	ISM	ENSMUSG00000025195.10	ENSMUST00000212592.2	3901	14	29951	-7	29951	6	3prime_fragment	FALSE	canonical	3	52	junction_1	0	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTTCCTTCATCTTGA	NA	False	NA	1	True	AATAAA	-21	NA	43838256	43835253	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_-_43836718_43838214
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066614	chr19	-	1467	1	Genic_Genomic	ENSMUSG00000025195.10	novel	NA	NA	NA	NA	31487	6	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTTCCTTCATCTTGA	NA	False	NA	1	True	AATAAA	-21	NA	43836720	43835253	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr19_-_43835300_43836700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066618	chr19	-	178	1	Intergenic	novelGene_219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTAAGAGTATAGT	NA	False	NA	NA	False	NA	NA	NA	43895663	43895485	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr19_-_43895500_43895700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066620	chr19	-	1257	8	NNC	ENSMUSG00000025196.5	novel	1828	9	NA	NA	-7128	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	14.059639731791	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCCACTTGCATGCCT	4423	False	NA	3	True	ATTAAA	-22	NA	43964260	43944745	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_43945076_43948424_43948544_43952169_43952270_43954613_43954754_43956891_43957004_43958440_43958624_43962371_43962528_43964143
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066666	chr19	-	1687	4	NIC	ENSMUSG00000057506.6	novel	885	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	1199	junction_3	40.0860186210715	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTTTGGTTTTTG	966	False	NA	NA	False	ATTAAA	-18	NA	44134882	44127684	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr19_-_44128153_44130562_44131580_44134379_44134497_44134797
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066686	chr19	+	925	3	FSM	ENSMUSG00000025202.9	ENSMUST00000237324.2	655	3	-259	-11	-259	11	multi-exon	FALSE	canonical	3	31	junction_1	4	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCTGTTCTTAGTCTTG	NA	False	NA	18	True	ATTAAA	-36	NA	44225994	44230468	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_+_44226317_44226814_44227048_44230098
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066717	chr19	-	180	1	Genic_Genomic	ENSMUSG00000025204.11	novel	NA	NA	NA	NA	2467	6	mono-exon	FALSE	NA	NA	NA	NA	NA	461	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTCTCCAGGAATAGT	7001	False	NA	-1	True	AATAAA	-35	NA	44538852	44538672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr19_-_44538700_44538900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066748	chr19	-	635	5	NNC	ENSMUSG00000025204.11	novel	680	5	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2274.37281189782	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTCTGGTTTCTGTGTCT	2003	False	NA	-18	True	AATAAA	-18	NA	44543850	44538689	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_44538843_44541132_44541293_44542107_44542208_44543369_44543497_44543755
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066754	chr19	-	634	5	NNC	ENSMUSG00000025204.11	novel	680	5	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2247.83529200874	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTCTGGTTTCTGTGTCT	2003	False	NA	-18	True	AATAAA	-18	NA	44543850	44538689	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_44538852_44541136_44541293_44542107_44542208_44543369_44543480_44543744
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066759	chr19	-	641	5	NNC	ENSMUSG00000025204.11	novel	680	5	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2247.83529200874	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTCTGGTTTCTGTGTCT	1980	False	NA	-18	True	AATAAA	-18	NA	44543873	44538689	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_44538852_44541136_44541293_44542107_44542208_44543369_44543497_44543777
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066766	chr19	-	647	5	NNC	ENSMUSG00000025204.11	novel	680	5	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2247.83529200874	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTCTGGTTTCTGTGTCT	1986	False	NA	-18	True	AATAAA	-18	NA	44543867	44538689	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_44538852_44541136_44541293_44542107_44542208_44543369_44543497_44543765
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066835	chr19	+	2262	15	FSM	ENSMUSG00000025217.16	ENSMUST00000065601.13	2978	15	0	716	0	4	multi-exon	FALSE	canonical	3	261	junction_1	116.411041625118	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTTGCTTTGCCGTTA	NA	False	NA	21	True	TATAAA	-23	NA	45352189	45517736	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_+_45352326_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066848	chr19	+	749	5	NNC	ENSMUSG00000025217.16	novel	2194	14	NA	NA	71582	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	273.107121840497	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTTGCTTTGCCGTTA	NA	False	NA	21	True	TATAAA	-23	NA	45505528	45517736	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_45505573_45507247_45507359_45507880_45507957_45515702_45515896_45517411
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066918	chr19	-	586	1	Genic_Genomic	ENSMUSG00000039901.11	novel	NA	NA	NA	NA	118484	4	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTCGTTAGTGTCTTTT	10003	False	NA	1	True	ATTAAA	-21	NA	45806384	45805798	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr19_-_45805800_45806400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066972	chr19	-	830	9	NNC	ENSMUSG00000036748.17	novel	1833	9	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	383.15205858771	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5829	False	NA	-2	True	AGTAAA	-19	NA	46327092	46318978	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_46319006_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46327007
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066992	chr19	-	1121	9	FSM	ENSMUSG00000036748.17	ENSMUST00000051234.9	1833	9	-16	728	-16	0	multi-exon	FALSE	canonical	3	390	junction_8	253.325599525591	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5806	False	NA	-2	True	AGTAAA	-19	NA	46327115	46318978	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46327007
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000066993	chr19	-	1143	10	NIC	ENSMUSG00000036748.17	novel	1164	10	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_9	349.700542086801	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5829	False	NA	-2	True	AGTAAA	-19	NA	46327092	46318978	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326851_46327007
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067052	chr19	-	297	1	NIC	ENSMUSG00000036748.17	novel	1790	9	NA	NA	1220	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	9167	False	NA	-2	True	AGTAAA	-19	NA	46319275	46318978	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr19_-_46319000_46319300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067068	chr19	-	1125	10	NIC	ENSMUSG00000036748.17	novel	1167	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	370.219587825761	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATATGCTCATTCTGCTC	5862	False	NA	-6	True	AGTAAA	-15	NA	46327059	46318982	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326870_46327007
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067095	chr19	+	594	1	Genic_Genomic	ENSMUSG00000025227.15	novel	NA	NA	NA	NA	7930	5	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGTCTGTGCCGTGTGT	6155	False	NA	18	True	AGTAAA	-18	NA	46363102	46363696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr19_+_46363100_46363700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067181	chr19	+	1766	1	ISM	ENSMUSG00000034336.4	ENSMUST00000037636.4	3240	3	8864	0	8864	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGACTCGTGCTCTGTGGT	NA	False	NA	12	True	ATTAAA	-15	NA	47012000	47013766	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_47012000_47013800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067183	chr19	-	1076	1	Genic_Genomic	ENSMUSG00000025050.9	novel	NA	NA	NA	NA	14799	4	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGTGTTGACATATTCT	NA	False	NA	-15	True	AATAAA	-21	NA	47023127	47022051	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr19_-_47022100_47023100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067215	chr19	-	278	3	NNC	ENSMUSG00000071528.5	novel	362	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2955	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	NA	False	NA	0	True	AATAAA	-17	NA	47079086	47071902	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_47072009_47074393_47074487_47079007
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067246	chr19	-	364	3	FSM	ENSMUSG00000071528.5	ENSMUST00000236170.2	352	3	-8	-4	-8	4	multi-exon	FALSE	canonical	3	3669	junction_2	1312	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATTGTATACACGAAAGA	NA	False	NA	NA	False	AATAAA	-20	NA	47079094	47074301	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_-_47074487_47074572_47074669_47079011
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067289	chr19	+	1451	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	48	-53	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	915.276734108324	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAATTTGTTTTCATTTTC	NA	False	NA	15	True	ATTAAA	-21	NA	47720168	47723974	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_47720261_47721076_47721144_47721240_47721428_47721957_47722351_47723262
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067308	chr19	+	1542	4	FSM	ENSMUSG00000025066.11	ENSMUST00000099353.6	1657	4	67	48	67	-48	multi-exon	FALSE	canonical	3	1732	junction_1	59.801523577767	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTCATTTTCCTCAT	NA	False	NA	20	True	ATTAAA	-26	NA	47720187	47723979	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_+_47720261_47721068_47721428_47721957_47722351_47723262
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067325	chr19	+	719	1	NIC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	2618	-48	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTCATTTTCCTCAT	NA	False	NA	20	True	ATTAAA	-26	NA	47723260	47723979	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr19_+_47723300_47724000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067328	chr19	+	1354	6	FSM	ENSMUSG00000025068.9	ENSMUST00000026050.8	1182	6	-168	-4	-168	4	multi-exon	FALSE	canonical	3	277	junction_4	32.103582354622	1027	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAAACCACCTCAGGTCA	8300	False	NA	25	True	ATTAAA	-34	NA	47843240	47853233	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_+_47843562_47843653_47843763_47846297_47846521_47847870_47847970_47851817_47851922_47852735
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067359	chr19	+	2121	2	ISM	ENSMUSG00000025026.16	ENSMUST00000236296.2	4075	16	49422	0	46329	0	3prime_fragment	FALSE	canonical	3	212	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGGTATAATGGGGT	NA	False	NA	8	True	AATAAA	-17	NA	53232805	53235518	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_53232837_53233428
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067401	chr19	+	1531	14	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	-2	17901	-2	-8563	5prime_fragment	FALSE	canonical	3	891	junction_13	80.6219903341749	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAACTACAAAGTGAAAGA	NA	False	NA	NA	False	AGTAAA	-12	NA	53588826	53616363	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067426	chr19	-	773	4	NNC	ENSMUSG00000084957.4	novel	2120	4	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	83.8106331095418	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGGGCTTGTACACTAC	NA	False	NA	NA	False	AATAAA	-17	NA	53932620	53919440	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_53919934_53920560_53920693_53931896_53932011_53932586
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067495	chr19	+	656	3	ISM	ENSMUSG00000033478.6	ENSMUST00000237170.2	5110	15	24290	2639	24290	-2639	3prime_fragment	FALSE	canonical	3	86	junction_1	7.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTAATTTTATAACTTTT	NA	False	NA	NA	False	NA	NA	NA	57373751	57375379	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_57373827_57374711_57374816_57374902
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067499	chr19	+	1753	1	Genic_Genomic	ENSMUSG00000033478.6	novel	NA	NA	NA	NA	26812	8	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCGTATATTTTTGTA	NA	False	NA	10	True	AATAAA	-21	NA	57376273	57378026	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr19_+_57376300_57378000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067506	chr19	+	729	5	NNC	ENSMUSG00000025086.14	novel	2513	6	NA	NA	0	-9801	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	89.3602260516389	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTGGATTATCCTTGAC	NA	False	NA	NA	False	ATTAAA	-26	NA	57441370	57462257	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57462023
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067511	chr19	+	384	1	ISM	ENSMUSG00000025086.14	ENSMUST00000026073.14	3789	8	35615	2095	35570	1893	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCCTGCCTGTTCGTT	NA	False	NA	13	True	ATTAAA	-2	NA	57476958	57477342	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_+_57477000_57477300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067516	chr19	-	437	2	Antisense	novelGene_ENSMUSG00000054843.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTTGTCTTGGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	57935623	57801881	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr19_-_57802099_57935403
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067557	chr19	+	508	2	Genic_Genomic	ENSMUSG00000067038.7	novel	396	1	NA	NA	-83	6780	multi-exon	FALSE	canonical	0	0	junction_1	0	54	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACATAATATGATTCAATAA	NA	False	NA	NA	False	NA	NA	NA	59310719	59317978	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr19_+_59311212_59317962
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067615	chr19	-	2393	6	NNC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	3396	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	537.768500379113	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	9773	False	NA	-31	True	AATAAA	-17	NA	60757193	60749554	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr19_-_60750743_60751502_60751703_60752465_60752672_60754771_60755434_60756012_60756102_60757145
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067629	chr19	+	2275	8	FSM	ENSMUSG00000024993.16	ENSMUST00000119633.8	2267	8	0	-8	0	8	multi-exon	FALSE	canonical	3	56	junction_2	141.985771060601	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGATGTCTTTTCATT	NA	False	NA	NA	False	ATTAAA	-21	NA	60800028	60824673	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_+_60800112_60803029_60803247_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067638	chr19	-	1487	7	FSM	ENSMUSG00000024997.8	ENSMUST00000025961.7	1478	7	-9	0	-9	0	multi-exon	FALSE	canonical	3	658	junction_4	52.5148127251308	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGGCACCGTTTCTCC	1438	False	NA	-1	True	AATAAA	-34	NA	60863003	60852488	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_-_60853158_60853603_60853770_60855953_60856058_60858441_60858578_60859857_60860000_60861565_60861702_60862869
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067648	chr19	-	523	2	ISM	ENSMUSG00000024997.8	ENSMUST00000025961.7	1478	7	76	8739	76	-8739	5prime_fragment	FALSE	canonical	3	785	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAAAAAAAGTTGCA	1523	False	NA	NA	False	NA	NA	NA	60862918	60861227	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr19_-_60861702_60862869
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067657	chr19	-	473	3	FSM	ENSMUSG00000074733.15	ENSMUST00000143264.8	4825	3	-24	4376	3	171	multi-exon	FALSE	canonical	3	41	junction_2	7	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTTTGAGAATTACTG	NA	False	NA	NA	False	NA	NA	NA	61129252	61115269	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr19_-_61115506_61115875_61116003_61129142
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067713	chr2	+	441	1	Intergenic	novelGene_220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGTATGATGACATTTT	2245	False	NA	14	True	AATAAA	-25	NA	3455953	3456394	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_+_3456000_3456400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067724	chr2	-	1760	14	NNC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-33	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	283.203650563173	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGTCTTTGTTTTCTTT	3980	False	NA	-4	True	ATTAAA	-21	NA	3513813	3489885	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_3490107_3490734_3490806_3491973_3492148_3492555_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067730	chr2	-	1758	14	NNC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	283.243450182005	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGGAGTCTTTGTTTTC	3981	False	NA	-7	True	ATTAAA	-18	NA	3513812	3489888	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499054_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067731	chr2	-	1748	14	NNC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	283.331177622615	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGGAGTCTTTGTTTTC	3981	False	NA	-7	True	ATTAAA	-18	NA	3513812	3489888	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502170_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067777	chr2	+	1371	8	NIC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	243	-1181	combination_of_known_junctions	FALSE	canonical	3	91	junction_2	174.392707205693	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTTTTCCTGTTACATTA	4335	False	NA	8	True	AATAAA	-15	NA	4886617	4911767	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_4886672_4889142_4889417_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067782	chr2	+	1477	9	FSM	ENSMUSG00000026664.8	ENSMUST00000027975.8	1438	9	-24	-15	-24	15	multi-exon	FALSE	canonical	3	390	junction_4	31.960669188864	817	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTTTTTTAAGATTTA	967	False	NA	24	True	AATAAA	-35	NA	4923805	4943556	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_4923956_4927638_4927698_4930408_4930520_4932160_4932330_4933481_4933564_4935523_4935706_4940779_4940930_4942486_4942622_4943117
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067810	chr2	+	631	1	Intergenic	novelGene_221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGATAGATTGTCATTAAG	NA	False	NA	NA	False	NA	NA	NA	4964886	4965517	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_+_4964900_4965500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067830	chr2	-	2096	11	ISM	ENSMUSG00000026672.12	ENSMUST00000114996.8	2614	14	17845	0	-9003	0	3prime_fragment	FALSE	canonical	3	118	junction_4	15.7800506970035	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	False	NA	0	True	AGTAAA	-17	NA	5051011	5025452	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067845	chr2	-	1250	13	NNC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-19	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	309.266560681163	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTGATGGTTTGTATA	NA	False	NA	1	True	AATAAA	-23	NA	5849771	5799467	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_5799692_5800359_5800488_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067861	chr2	-	220	1	NIC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	3717	3	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCTACTGTGATGGTTT	NA	False	NA	-4	True	AATAAA	-18	NA	5799692	5799472	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_5799500_5799700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067884	chr2	-	1231	11	NNC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-31	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	424.364465995917	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCCTACTGTGATGGTT	NA	False	NA	-5	True	AATAAA	-17	NA	5849783	5799473	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_5799692_5800359_5800498_5803171_5803301_5809694_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5838466_5838525_5846763_5846836_5849645
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067923	chr2	-	1134	5	FSM	ENSMUSG00000039128.14	ENSMUST00000150876.2	562	5	-118	-454	-28	454	multi-exon	FALSE	canonical	3	1033	junction_1	96.4507646418627	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGTCTTTTTTTATT	NA	False	NA	NA	False	ATTAAA	-32	NA	5849780	5827172	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067970	chr2	+	428	1	ISM	ENSMUSG00000025817.13	ENSMUST00000026927.10	4764	10	23294	3155	20178	4	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACTTGGGGGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	5873123	5873551	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_5873100_5873600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067973	chr2	-	2233	11	NIC	ENSMUSG00000025816.16	novel	2448	12	NA	NA	-32	5	combination_of_known_splicesites	TRUE	canonical	3	14	junction_5	87.372821861263	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTCTCTAAGAGTATTTC	NA	False	NA	-12	True	AATAAA	-15	NA	5900177	5875792	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_5876833_5878553_5878631_5879037_5879230_5881174_5881373_5881651_5881813_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067990	chr2	-	1139	3	ISM	ENSMUSG00000025782.13	ENSMUST00000026888.11	4792	7	-13	37873	-13	-36347	5prime_fragment	FALSE	canonical	3	137	junction_1	7	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTGGACGCTCCAAGAG	NA	False	NA	NA	False	AAGAAA	-6	NA	10053420	9957235	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_9957757_10047237_10047481_10053045
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000067993	chr2	-	1189	10	FSM	ENSMUSG00000025781.15	ENSMUST00000114897.9	1166	10	-10	-13	-10	-1	multi-exon	TRUE	canonical	3	3857	junction_2	289.314942238504	3433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAATTGTAACTTTCAGA	9494	False	NA	11	True	AATAAA	-32	NA	10085331	10060827	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068006	chr2	-	1092	10	NNC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1431.72885218286	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9575	False	NA	-2	True	AATAAA	-19	NA	10085250	10060840	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073546_10074499_10074539_10085158
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068032	chr2	-	134	1	NIC	ENSMUSG00000025781.15	novel	1060	9	NA	NA	23696	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	7697	False	NA	-2	True	AATAAA	-19	NA	10060974	10060840	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_10060800_10061000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068043	chr2	-	378	3	Antisense	novelGene_ENSMUSG00000025780.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCTTGATCATAGTGTC	NA	False	NA	NA	False	NA	NA	NA	10182179	10176968	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr2_-_10177106_10179127_10179254_10182064
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068055	chr2	-	750	5	NNC	ENSMUSG00000086748.2	novel	1020	4	NA	NA	8799	3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	213.253810048027	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTTCATTCTGTTTT	NA	False	NA	-10	True	AATAAA	-17	NA	10370053	10344090	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_10344284_10344916_10345042_10346331_10346540_10350061_10350197_10369964
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068058	chr2	-	629	4	NNC	ENSMUSG00000086748.2	novel	1020	4	NA	NA	8799	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	227.197417825702	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTTCATTCTGTTTT	NA	False	NA	-10	True	AATAAA	-17	NA	10370053	10344090	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_10344284_10346327_10346540_10350061_10350197_10369964
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068061	chr2	-	650	4	NNC	ENSMUSG00000086748.2	novel	1020	4	NA	NA	8799	3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	238.302795246347	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTTCATTCTGTTTT	NA	False	NA	-10	True	AATAAA	-17	NA	10370053	10344090	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_10344284_10346331_10346540_10350061_10350197_10369939
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068063	chr2	-	682	4	NNC	ENSMUSG00000086748.2	novel	1020	4	NA	NA	8801	3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	239.714181659928	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTTCATTCTGTTTT	NA	False	NA	-10	True	AATAAA	-17	NA	10370051	10344090	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_10344284_10346331_10346540_10350061_10350197_10369905
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068070	chr2	-	662	4	NNC	ENSMUSG00000086748.2	novel	1020	4	NA	NA	8799	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	241.59608164593	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTTCATTCTGTTTT	NA	False	NA	-10	True	AATAAA	-17	NA	10370053	10344090	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_10344284_10346331_10346540_10350061_10350197_10369927
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068091	chr2	-	890	1	ISM	ENSMUSG00000026773.20	ENSMUST00000192949.6	4801	15	81363	392	9397	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCGGGACTCGCTTCTCA	7256	False	NA	-4	True	AATAAA	-18	NA	11477525	11476635	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_11476600_11477500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068097	chr2	-	294	1	NIC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	260	0	mono-exon	FALSE	NA	NA	NA	NA	NA	937	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTCTCTGGTTGTTTCT	6189	False	NA	-24	True	TATAAA	-18	NA	11590541	11590247	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_11590200_11590500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068100	chr2	-	471	3	FSM	ENSMUSG00000037197.12	ENSMUST00000150369.2	663	3	194	-2	194	0	multi-exon	FALSE	canonical	3	1364	junction_2	31.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTCTCTGGTTGTTT	4945	False	NA	-26	True	TATAAA	-16	NA	11591785	11590249	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_11590540_11590644_11590718_11591677
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068105	chr2	-	828	4	ISM	ENSMUSG00000058594.16	ENSMUST00000071564.14	3567	21	29091	-2	738	0	3prime_fragment	FALSE	canonical	3	293	junction_3	11.7756811551038	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	0	True	ATTAAA	-37	NA	11753302	11747383	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068112	chr2	-	2343	15	FSM	ENSMUSG00000026767.13	ENSMUST00000028105.13	2344	15	1	0	1	0	multi-exon	FALSE	canonical	3	102	junction_11	25.5990473355904	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCACTTTTACATTTG	NA	False	NA	-22	True	AATAAA	-19	NA	12424280	12352073	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12405835_12405888_12408808_12408980_12410670_12410732_12414811_12414892_12423969
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068186	chr2	+	778	1	Antisense	novelGene_ENSMUSG00000054057.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTACTTGTTTGAAGGC	4479	False	NA	NA	False	NA	NA	NA	18032444	18033222	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr2_+_18032400_18033200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068197	chr2	-	322	1	NIC	ENSMUSG00000086340.2	novel	487	3	NA	NA	47	-2052	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGTGGTTGCATTTAC	NA	False	NA	NA	False	AGTAAA	-17	NA	18061377	18061055	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_18061100_18061400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068210	chr2	-	435	1	ISM	ENSMUSG00000026740.13	ENSMUST00000166495.8	5497	12	175720	2927	-208	459	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTTGGGCTTGTTCTTCA	NA	False	NA	0	True	TTTAAA	-32	NA	18221921	18221486	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_18221500_18221900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068236	chr2	-	1667	1	ISM	ENSMUSG00000026737.13	ENSMUST00000006912.12	3477	10	154205	0	22199	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCTTCTCTGTGCTGG	NA	False	NA	0	True	AATAAA	-21	NA	18848732	18847065	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_18847100_18848700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068237	chr2	-	666	2	Antisense	novelGene_ENSMUSG00000037683.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTTTTCCATTTTAAGC	NA	False	NA	NA	False	ATTAAA	-36	NA	19297314	19293282	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr2_-_19293794_19297159
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068259	chr2	+	389	3	NNC	ENSMUSG00000036617.18	novel	2863	8	NA	NA	-61457	5920	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7.5	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGTTGTGATGTCTG	1510	False	NA	NA	False	NA	NA	NA	20656664	20673047	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_20656695_20666708_20666908_20672887
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068342	chr2	+	1609	9	NIC	ENSMUSG00000026975.11	novel	1666	9	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	28.4250659629841	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTATGCATCTGTCT	NA	False	NA	36	True	ATTAAA	-39	NA	24852471	24862175	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_24852638_24853034_24853169_24853467_24853556_24855568_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068349	chr2	-	772	2	FSM	ENSMUSG00000036850.5	ENSMUST00000045604.4	776	2	7	-3	7	3	multi-exon	FALSE	canonical	3	317	junction_1	0	1887	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTTGAATCAAGTCAT	NA	False	NA	0	True	ATTAAA	-24	NA	24865103	24864125	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_24864694_24864899
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068358	chr2	+	577	1	FSM	ENSMUSG00000084383.2	ENSMUST00000121309.2	483	1	-36	-58	-36	58	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATAGCCACCCTTACT	NA	False	NA	NA	False	AATAAA	-41	NA	24875959	24876536	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_24876000_24876500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068378	chr2	-	1215	1	Genic_Genomic	ENSMUSG00000036752.5	novel	NA	NA	NA	NA	1282	2	mono-exon	FALSE	NA	NA	NA	NA	NA	440	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCCTGTCCAATTCCTTC	NA	False	NA	-22	True	ATTAAA	-20	NA	25113384	25112169	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_-_25112200_25113400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068387	chr2	-	1542	4	NNC	ENSMUSG00000036752.5	novel	1598	4	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	648.455772500245	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTCGCCTGTCCAATTC	NA	False	NA	-26	True	ATTAAA	-16	NA	25114669	25112173	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_25113381_25113945_25114057_25114135_25114236_25114545
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068388	chr2	-	1555	4	NNC	ENSMUSG00000036752.5	novel	1598	4	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	639.312651733615	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTCGCCTGTCCAATTC	NA	False	NA	-26	True	ATTAAA	-16	NA	25114669	25112173	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_25113381_25113941_25114057_25114135_25114245_25114545
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068393	chr2	-	2195	2	FSM	ENSMUSG00000036752.5	ENSMUST00000145607.2	831	2	-3	-1361	-3	-2	multi-exon	FALSE	canonical	3	1369	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTCGCCTGTCCAATTC	NA	False	NA	-26	True	ATTAAA	-16	NA	25114669	25112173	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_25114245_25114545
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068410	chr2	-	2312	14	FSM	ENSMUSG00000006471.19	ENSMUST00000114349.9	2336	14	24	0	1	0	multi-exon	FALSE	canonical	3	150	junction_3	18.4333117547694	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGCCGCTCACTTCTC	NA	False	NA	-6	True	CATAAA	-16	NA	25145397	25137240	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068437	chr2	-	744	3	NNC	ENSMUSG00000026966.7	novel	862	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	348.5	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCTGCTAGCTACCA	NA	False	NA	-6	True	AATAAA	-16	NA	25162424	25161050	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_25161594_25162054_25162141_25162309
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068447	chr2	-	859	3	NNC	ENSMUSG00000026966.7	novel	862	3	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	352	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGTGTCTGCTAGCTAC	NA	False	NA	-8	True	AATAAA	-14	NA	25162405	25161052	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_25161594_25161918_25162141_25162309
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068489	chr2	-	818	5	NNC	ENSMUSG00000026956.16	novel	652	6	NA	NA	153	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	198.367556571129	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGATTGTCTGTCTATTT	1385	False	NA	-16	True	NA	NA	NA	25253987	25251501	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_25251752_25252082_25252150_25252674_25252861_25253251_25253397_25253817
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068513	chr2	-	773	7	FSM	ENSMUSG00000015090.14	ENSMUST00000114259.3	775	7	0	2	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.71558280160133	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTTTGCTTTTGTCTGTC	5892	False	NA	-1	True	AATAAA	-17	NA	25359761	25356722	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_25356844_25357331_25357358_25357829_25357932_25358083_25358201_25358844_25358922_25358999_25359140_25359571
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068540	chr2	+	721	5	NNC	ENSMUSG00000015092.10	novel	722	5	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	1136.89541625428	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTGGATTTTTCCTCC	NA	False	NA	19	True	NA	NA	NA	25447865	25452096	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_25448042_25450162_25450219_25450551_25450713_25450980_25451075_25451862
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068568	chr2	+	235	1	Genic_Genomic	ENSMUSG00000015092.10	novel	NA	NA	NA	NA	1265	2	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTGGATTTTTCCTCC	NA	False	NA	19	True	NA	NA	NA	25451861	25452096	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_25451900_25452100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068594	chr2	-	978	1	Genic_Genomic	ENSMUSG00000015087.15	novel	NA	NA	NA	NA	1070	5	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGACTCTTTTTCTGG	4351	False	NA	-1	True	CATAAA	-20	NA	25474002	25473024	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_-_25473000_25474000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068680	chr2	+	600	2	FSM	ENSMUSG00000086714.2	ENSMUST00000151521.2	600	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGCATGTAGTTTTTTT	5502	False	NA	NA	False	AATACA	-19	NA	26335935	26348007	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_26336213_26347684
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068683	chr2	+	128	1	Intergenic	novelGene_222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAACTAGTGCAGGGAAT	2268	False	NA	NA	False	NA	NA	NA	26448295	26448423	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_+_26448300_26448400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068716	chr2	-	1304	6	FSM	ENSMUSG00000026922.14	ENSMUST00000131940.8	1273	6	-35	4	-35	-4	multi-exon	FALSE	canonical	3	206	junction_5	210.357219985433	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTGGGTAGAGTTCTTT	9567	False	NA	-3	True	TATAAA	-41	NA	26494258	26483072	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494135
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068741	chr2	-	738	3	Intergenic	novelGene_223	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	30	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGAATCTTTCTTTGCT	NA	False	NA	-6	True	AATAAA	-16	NA	26530256	26527187	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_-_26527646_26528052_26528108_26530031
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068744	chr2	-	738	4	Intergenic	novelGene_224	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	25.3113940087595	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGAATCTTTCTTTGCT	NA	False	NA	-6	True	AATAAA	-16	NA	26530256	26527187	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_-_26527646_26528052_26528108_26529441_26529480_26530069
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068758	chr2	-	1149	3	Genic_Genomic	ENSMUSG00000097052.4	novel	139	1	NA	NA	-2259	671	multi-exon	FALSE	canonical	3	46	junction_2	0.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGAATCTTTCTTTGCT	NA	False	NA	-6	True	AATAAA	-16	NA	26530256	26527187	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_-_26528108_26529441_26529484_26530069
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068814	chr2	+	870	8	NNC	ENSMUSG00000062647.17	novel	914	8	NA	NA	-14	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1810.13123889977	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGACTGCCTTTGGTTAT	NA	False	NA	0	True	AATATA	-13	NA	26800814	26803324	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_26800843_26801017_26801139_26801433_26801584_26802030_26802176_26802380_26802458_26802682_26802814_26802999_26803070_26803176
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068831	chr2	-	1031	9	NIC	ENSMUSG00000015790.17	novel	1151	9	NA	NA	-15	6	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	115.533544912289	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCTGAAACCGTTTTACA	NA	False	NA	3	True	AATAAA	-27	NA	26806372	26803386	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805762_26805966_26806019_26806268
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068897	chr2	+	463	1	Genic_Genomic	ENSMUSG00000014873.16	novel	NA	NA	NA	NA	2297	4	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTATCATTGTTTTCT	NA	False	NA	41	True	CATAAA	-36	NA	26809736	26810199	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_26809700_26810200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068908	chr2	-	2245	8	FSM	ENSMUSG00000052406.15	ENSMUST00000064244.11	2281	8	40	-4	-22	4	multi-exon	FALSE	canonical	3	152	junction_5	23.9344342497821	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGGAAGTTCATGTTT	NA	False	NA	-2	True	AATAAA	-18	NA	26854358	26843570	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850235_26850430_26850614_26850753_26852394_26852736_26854063
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068915	chr2	-	694	1	ISM	ENSMUSG00000052406.15	ENSMUST00000064244.11	2281	8	10130	0	1428	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTGTGTGGAAGTTCAT	NA	False	NA	-6	True	AATAAA	-14	NA	26844268	26843574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_26843600_26844300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068936	chr2	-	1330	1	Genic_Genomic	ENSMUSG00000026918.17	novel	NA	NA	NA	NA	17211	3	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTGGTGCTCTTTG	NA	False	NA	-3	True	AATAAA	-17	NA	27336917	27335587	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_-_27335600_27336900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068950	chr2	+	1729	1	ISM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	19650	0	7035	0	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCATATAAGTTTG	NA	False	NA	33	True	AATAAA	-19	NA	27424818	27426547	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_27424800_27426500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068953	chr2	+	1358	7	ISM	ENSMUSG00000015846.16	ENSMUST00000238913.2	1631	10	16655	-509	1673	14	3prime_fragment	FALSE	canonical	3	73	junction_1	8.59586463881842	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCTGAGATATCACTCCA	6688	False	NA	8	True	TATAAA	-16	NA	27631885	27650209	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000068972	chr2	+	1054	1	FSM	ENSMUSG00000082895.2	ENSMUST00000120702.2	885	1	-78	-91	-78	91	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACTCCAATGGTAGAGGA	NA	False	NA	NA	False	AATAAA	-39	NA	28367099	28368153	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_28367100_28368200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069001	chr2	-	347	1	ISM	ENSMUSG00000035666.15	ENSMUST00000171404.8	7127	6	17715	0	17641	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGATTTTTTTTTATTCTT	NA	False	NA	1	True	AATAAA	-25	NA	28712657	28712310	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_28712300_28712700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069003	chr2	+	1465	5	ISM	ENSMUSG00000026806.16	ENSMUST00000113853.3	3271	20	35246	0	18564	0	3prime_fragment	FALSE	canonical	3	109	junction_3	15.6744218394172	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAGGACTCAGCAGAGAAA	NA	False	NA	18	True	AATAAA	-19	NA	28765716	28795583	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069015	chr2	-	711	3	NNC	ENSMUSG00000079502.9	novel	1042	6	NA	NA	82271	211	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	5	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTGTTCTTTCACCATG	NA	False	NA	NA	False	AATAAA	-40	NA	28847101	28845170	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_28845637_28846006_28846109_28846958
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069026	chr2	+	993	2	NNC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	3042	0	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	0	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGTGAAATGACTTGAA	NA	False	NA	21	True	AATAAA	-23	NA	28976462	28977668	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_28976918_28977130
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069047	chr2	+	630	4	NNC	ENSMUSG00000026799.16	novel	1254	8	NA	NA	2264	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.6193124631743	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGCTCTGTGTTCTGCTT	NA	False	NA	29	True	AATAAA	-17	NA	29397146	29414802	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_29397233_29399434_29399477_29412785_29412864_29414378
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069053	chr2	+	438	1	ISM	ENSMUSG00000039844.21	ENSMUST00000102872.11	6402	24	120157	614	7366	1	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCCAGGCCTTCT	179	False	NA	18	True	AATAAA	-25	NA	29629938	29630376	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_29629900_29630400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069150	chr2	+	866	1	ISM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	23139	941	3058	-941	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGGTTACCTCAATATT	NA	False	NA	18	True	AATAAA	-28	NA	29848576	29849442	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_29848600_29849400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069153	chr2	-	1823	9	FSM	ENSMUSG00000039715.9	ENSMUST00000113711.3	1814	9	-9	0	-9	0	multi-exon	FALSE	canonical	3	156	junction_3	11.9973955507018	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGAGCCCCAAGGAGCA	NA	False	NA	0	True	NA	NA	NA	29938902	29921557	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_29921985_29922084_29922243_29922413_29922647_29922761_29922930_29923285_29923396_29923817_29923976_29924774_29924885_29928186_29928439_29938695
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069212	chr2	+	1666	1	Genic_Genomic	ENSMUSG00000054766.14	novel	NA	NA	NA	NA	747	5	mono-exon	FALSE	NA	NA	NA	NA	NA	1332	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTCTCCTTGTTTTGTA	NA	False	NA	24	True	AATAAA	-29	NA	29960928	29962594	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_29960900_29962600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069220	chr2	-	1200	5	FSM	ENSMUSG00000015335.17	ENSMUST00000081838.7	1187	5	-3	-10	-3	3	multi-exon	FALSE	canonical	3	80	junction_4	253.22754095872	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGACTCTTTCCTGG	NA	False	NA	0	True	ATTAAA	-19	NA	29983650	29980952	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_29981579_29981678_29981846_29981999_29982078_29982416_29982554_29983458
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069255	chr2	-	2026	11	FSM	ENSMUSG00000039660.17	ENSMUST00000144093.8	2010	11	11	-27	2	7	multi-exon	FALSE	canonical	3	299	junction_5	40.8044115262063	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGCTCACGTGACTGTA	NA	False	NA	-3	True	AATAAA	-40	NA	30068460	30063457	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067978_30068401
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069276	chr2	-	530	1	NIC	ENSMUSG00000039648.15	novel	1876	13	NA	NA	8459	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGCTTCTCTCTTCCTTT	NA	False	NA	-3	True	AATAAA	-25	NA	30075665	30075135	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_30075100_30075700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069281	chr2	+	912	1	ISM	ENSMUSG00000007476.19	ENSMUST00000095078.3	4301	4	25157	0	25157	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGGAGGTCTCCATGC	6075	False	NA	7	True	AATAAA	-15	NA	30152890	30153802	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_30152900_30153800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069323	chr2	+	563	1	NIC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	761	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGTCATGTGGCAACT	NA	False	NA	15	True	ATTAAA	-16	NA	30233712	30234275	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_30233700_30234300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069342	chr2	+	2585	10	FSM	ENSMUSG00000039515.12	ENSMUST00000042055.10	2586	10	2	-1	2	0	multi-exon	TRUE	canonical	3	440	junction_4	51.3501655905104	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTGAGACATCTTTT	NA	False	NA	18	True	ATTAAA	-21	NA	30306052	30337818	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_30306345_30316410_30316509_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328366_30329675_30329777_30333301_30333410_30336388
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069387	chr2	-	1306	3	NNC	ENSMUSG00000050737.14	novel	3647	3	NA	NA	36	502	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	49.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCGGTGTCTAAGACCCA	8447	False	NA	NA	False	ATTAAA	-22	NA	30793273	30781791	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_30782839_30790874_30790962_30793101
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069412	chr2	+	252	1	Intergenic	novelGene_225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGGATAGCCTAAAAGTCA	NA	False	NA	NA	False	NA	NA	NA	30861761	30862013	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_+_30861800_30862000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069460	chr2	+	1989	18	NNC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	-11	45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	147.775875374029	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGAGCCTGGGTCTGTGC	NA	False	NA	20	True	AGTAAA	-28	NA	31042316	31104623	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_31042494_31057032_31057160_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081907_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069469	chr2	+	368	1	ISM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	61928	4164	4144	45	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGAGCCTGGGTCTGTGC	NA	False	NA	20	True	AGTAAA	-28	NA	31104255	31104623	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_31104300_31104600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069493	chr2	+	1603	16	NNC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	95	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	745.367542446901	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTCTGCGTGTGTG	NA	False	NA	25	True	ATTAAA	-20	NA	31360313	31410682	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391569_31400121_31400254_31404690_31404848_31408737_31408804_31410383
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069524	chr2	+	1647	9	NNC	ENSMUSG00000039356.16	novel	1686	9	NA	NA	-6	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	306.905421099074	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAATAAAGGGAGGTAGCA	NA	False	NA	NA	False	NA	NA	NA	31560739	31571337	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_31560874_31562483_31562586_31564526_31564573_31564706_31564797_31565850_31565915_31566679_31566749_31568462_31568640_31569862_31569992_31570501
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069546	chr2	+	183	1	Intergenic	novelGene_226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAGAGCTCAGAGGCAG	5579	False	NA	NA	False	NA	NA	NA	31971262	31971445	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_+_31971300_31971400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069604	chr2	-	740	5	NNC	ENSMUSG00000044627.12	novel	768	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1521.86158618318	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32178048	32168827	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_32169144_32170720_32170816_32171697_32171823_32177604_32177658_32177897
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069606	chr2	-	733	5	NNC	ENSMUSG00000044627.12	novel	768	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1492.44472259444	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32178048	32168827	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_32169144_32170720_32170816_32171697_32171823_32177608_32177651_32177893
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069632	chr2	-	736	5	NNC	ENSMUSG00000044627.12	novel	768	5	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1535.73516597101	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32178024	32168827	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_32169168_32170720_32170816_32171697_32171823_32177608_32177658_32177897
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069658	chr2	+	902	4	FSM	ENSMUSG00000026810.13	ENSMUST00000028151.7	869	4	-33	0	-33	0	multi-exon	FALSE	canonical	3	274	junction_1	58.5965490072202	890	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCATCCTTGCTCTG	4740	False	NA	23	True	AATAAA	-24	NA	32460836	32463591	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_32460925_32461217_32461308_32462308_32462412_32462970
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069679	chr2	+	1645	6	FSM	ENSMUSG00000079442.13	ENSMUST00000102818.11	3626	6	-15	1996	-15	1	multi-exon	FALSE	canonical	3	25	junction_4	7.22218803410712	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTCTCTGTGGTAAC	NA	False	NA	8	True	NA	NA	NA	32477091	32487714	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_32477240_32477592_32477694_32479456_32479643_32484001_32484415_32485705_32485814_32487025
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069683	chr2	+	630	1	ISM	ENSMUSG00000079442.13	ENSMUST00000102818.11	3626	6	9978	1996	2797	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTCTCTGTGGTAAC	NA	False	NA	8	True	NA	NA	NA	32487084	32487714	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_32487100_32487700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069698	chr2	+	871	6	FSM	ENSMUSG00000026817.15	ENSMUST00000068271.5	2034	6	-22	1185	-22	467	multi-exon	FALSE	canonical	3	94	junction_1	85.0895998345274	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGATTGCTCCTTTCCTTT	NA	False	NA	NA	False	ACTAAA	-19	NA	32519493	32523879	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_32519629_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069734	chr2	+	982	5	FSM	ENSMUSG00000053746.9	ENSMUST00000066352.6	952	5	-24	-6	-24	6	multi-exon	FALSE	canonical	3	42	junction_4	3.34477204006491	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTGTGGGGTTAGGCA	8167	False	NA	12	True	ATTAAA	-22	NA	32665773	32667615	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_32665908_32666315_32666536_32666718_32666819_32666994_32667041_32667133
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069745	chr2	-	187	1	Intergenic	novelGene_227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCAGAGGTGGTGTATA	NA	False	NA	NA	False	NA	NA	NA	32743906	32743719	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_-_32743700_32743900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069777	chr2	+	655	7	NNC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2381.32025122386	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5767	False	NA	24	True	AATAAA	-23	NA	32851696	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853856_32854002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069797	chr2	+	1434	4	FSM	ENSMUSG00000038900.18	ENSMUST00000154340.8	1417	4	-17	0	-8	0	multi-exon	FALSE	canonical	3	2580	junction_3	1756.95310757636	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5794	False	NA	24	True	AATAAA	-23	NA	32851723	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_32852135_32852585_32852685_32852996_32853866_32854002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069802	chr2	+	600	7	NNC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2572.53342489893	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_32851842_32852086_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069806	chr2	+	632	7	NNC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2572.53342489893	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_32851848_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069809	chr2	+	621	7	NNC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2381.32025122386	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853851_32854002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069810	chr2	+	876	7	NNC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2421.12356837344	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853268_32853596_32853752_32853866_32854002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069811	chr2	+	773	6	ISM	ENSMUSG00000038900.18	ENSMUST00000126610.2	1242	7	155	451	-6	0	intron_retention	FALSE	canonical	3	5241	junction_1	561.076964417539	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069813	chr2	+	658	7	NNC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	2420.81449218141	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853486_32853596_32853752_32853866_32854002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069814	chr2	+	625	7	NNC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	-6	0	at_least_one_novel_splicesite	TRUE	canonical	1	13	junction_5	2460.30633255292	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853763_32853866_32854002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069815	chr2	+	626	7	NNC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2572.53342489893	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_32851852_32852070_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069817	chr2	+	629	7	NNC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2381.32025122386	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854009
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069818	chr2	+	793	6	NIC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	-6	0	intron_retention	FALSE	canonical	3	2580	junction_5	1531.06080872054	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853866_32854002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069820	chr2	+	1360	4	FSM	ENSMUSG00000038900.18	ENSMUST00000125415.3	600	4	-26	-734	-6	0	multi-exon	FALSE	canonical	3	5241	junction_1	528.984771887517	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069825	chr2	+	633	7	NNC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2381.32025122386	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853870_32854009
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069832	chr2	+	630	7	NNC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2381.32025122386	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853870_32854012
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069834	chr2	+	630	7	NNC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2421.12356837344	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853083_32853518_32853596_32853752_32853866_32854002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069840	chr2	+	619	7	NNC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	-6	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2522.38674451181	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGAATGGGCTTGGCTG	5796	False	NA	16	True	AATAAA	-15	NA	32851725	32854049	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_32851852_32852060_32852135_32852594_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069843	chr2	+	640	7	NNC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2421.12356837344	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853083_32853508_32853596_32853752_32853866_32854002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069870	chr2	+	710	7	NNC	ENSMUSG00000038900.18	novel	729	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2572.22526337713	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_32851926_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069873	chr2	+	745	7	NNC	ENSMUSG00000038900.18	novel	729	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2572.53342489893	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_32851961_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069877	chr2	+	670	6	NIC	ENSMUSG00000038900.18	novel	729	7	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_4	2753.40390062918	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_32851973_32852060_32852135_32852585_32852685_32852996_32853079_32853752_32853866_32854002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069879	chr2	+	1481	4	ISM	ENSMUSG00000038900.18	ENSMUST00000102811.10	729	7	-26	-2	-6	0	intron_retention	FALSE	canonical	3	310	junction_1	2822.92358301736	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_32851973_32852060_32852135_32852585_32852685_32852996
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069880	chr2	+	747	7	NNC	ENSMUSG00000038900.18	novel	729	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2996.7682407702	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_32851973_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853856_32854002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069882	chr2	+	747	7	NNC	ENSMUSG00000038900.18	novel	729	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2829.2217667683	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_32851973_32852060_32852135_32852585_32852685_32852996_32853079_32853518_32853596_32853752_32853866_32854002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069883	chr2	+	752	7	NNC	ENSMUSG00000038900.18	novel	729	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2953.49811899193	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_32851973_32852060_32852130_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069884	chr2	+	751	7	NNC	ENSMUSG00000038900.18	novel	729	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2884.64090293556	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_32851973_32852060_32852135_32852585_32852685_32853002_32853079_32853508_32853596_32853752_32853866_32854002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069886	chr2	+	761	7	NNC	ENSMUSG00000038900.18	novel	729	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2996.7682407702	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_32851973_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853870_32854002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069900	chr2	+	845	6	NIC	ENSMUSG00000038900.18	novel	729	7	NA	NA	-6	0	intron_retention	FALSE	canonical	3	2580	junction_5	1584.70918467711	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069901	chr2	+	1275	5	NIC	ENSMUSG00000038900.18	novel	729	7	NA	NA	-6	0	intron_retention	FALSE	canonical	3	2580	junction_4	1654.68310787897	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_32852135_32852585_32852685_32852996_32853596_32853752_32853866_32854002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069902	chr2	+	758	5	NIC	ENSMUSG00000038900.18	novel	729	7	NA	NA	-6	0	intron_retention	FALSE	canonical	3	24	junction_3	2655.23699507219	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_32852135_32852585_32852685_32852996_32853079_32853752_32853866_32854002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069913	chr2	+	1883	3	NIC	ENSMUSG00000038900.18	novel	1417	4	NA	NA	-6	0	intron_retention	FALSE	canonical	3	2580	junction_2	1971.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_32852685_32852996_32853866_32854002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069919	chr2	+	2332	1	FSM	ENSMUSG00000065124.3	ENSMUST00000083190.3	130	1	-1577	-625	-1577	625	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	24	True	AATAAA	-23	NA	32851725	32854057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_32851700_32854100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069936	chr2	+	424	1	ISM	ENSMUSG00000038900.18	ENSMUST00000126610.2	1242	7	2510	4	1803	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGCAATTGTTGGGGC	8151	False	NA	20	True	AATAAA	-21	NA	32854080	32854504	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_32854100_32854500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069943	chr2	-	753	1	Genic_Genomic	ENSMUSG00000026791.15	novel	NA	NA	NA	NA	8284	9	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGCCAGAAGTCTTTTG	NA	False	NA	-4	True	AATAAA	-24	NA	32863745	32862992	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_-_32863000_32863700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069959	chr2	-	1699	3	FSM	ENSMUSG00000026788.14	ENSMUST00000028125.12	4998	3	6	3293	6	-58	multi-exon	TRUE	canonical	3	44	junction_1	8.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTTCTGAAAGACCAGC	NA	False	NA	NA	False	NA	NA	NA	33358538	33343591	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_33345136_33354925_33354987_33358444
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069980	chr2	-	454	3	NNC	ENSMUSG00000038740.10	novel	520	3	NA	NA	13	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGTGTGTTTTGATGA	3762	False	NA	0	True	AATAAA	-20	NA	33777945	33763620	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_33763860_33764349_33764473_33777853
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069987	chr2	-	1672	3	NNC	ENSMUSG00000087461.3	novel	2668	4	NA	NA	80959	-903	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	1	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTGTTTACCCTCAAGA	NA	False	NA	NA	False	NA	NA	NA	33916782	33909203	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_33910509_33915810_33915970_33916574
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000069998	chr2	+	1429	3	Genic_Genomic	ENSMUSG00000081992.2	novel	798	1	NA	NA	-152056	55	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGATGGCTACAGCTGCA	NA	False	NA	NA	False	AATAAA	-25	NA	34302954	34455863	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_34303367_34303540_34303651_34454956
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070005	chr2	+	1167	2	Genic_Genomic	ENSMUSG00000081992.2	novel	798	1	NA	NA	-58909	55	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGATGGCTACAGCTGCA	NA	False	NA	NA	False	AATAAA	-25	NA	34396101	34455863	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_34396362_34454956
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070031	chr2	-	160	1	ISM	ENSMUSG00000070953.14	ENSMUST00000145903.8	2968	8	21861	336	17254	-336	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCTTCCATTATTTGGT	NA	False	NA	0	True	AATAAA	-18	NA	34668063	34667903	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_34667900_34668100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070043	chr2	-	1183	8	NIC	ENSMUSG00000070953.14	novel	2968	8	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_4	131.97928099609	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	2758	False	NA	-22	True	AATAAA	-17	NA	34689803	34669228	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675738_34680514_34680668_34685183_34685342_34687386_34687446_34689762
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070104	chr2	-	3006	8	FSM	ENSMUSG00000026878.18	ENSMUST00000028238.15	3081	8	75	0	-63	0	multi-exon	FALSE	canonical	3	853	junction_1	102.482054178141	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGCATTATTTTTGA	9627	False	NA	NA	False	AATAAA	-26	NA	35091057	35070216	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070108	chr2	-	518	1	Genic_Genomic	ENSMUSG00000026880.12	novel	NA	NA	NA	NA	6003	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGAGTCTTGTTTCTG	NA	False	NA	1	True	AATAAA	-21	NA	35204514	35203996	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_-_35204000_35204500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070148	chr2	-	1837	1	ISM	ENSMUSG00000026889.13	ENSMUST00000028251.10	2617	6	18858	0	18661	0	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGGTCTTATTGTCT	NA	False	NA	-23	True	AATAAA	-16	NA	36007927	36006090	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_36006100_36007900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070181	chr2	+	185	1	Intergenic	novelGene_228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGACTGCAATGAGAACAT	NA	False	NA	NA	False	NA	NA	NA	37356825	37357010	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_+_37356800_37357000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070204	chr2	-	1011	8	NNC	ENSMUSG00000026750.7	novel	1160	8	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	614.944696368573	217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTTGTAATGTTGG	2359	False	NA	-18	True	AATAAA	-24	NA	38533953	38478047	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_38478301_38480708_38480858_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533369_38533464_38533852
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070205	chr2	-	1119	8	NNC	ENSMUSG00000026750.7	novel	1160	8	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	614.926907884845	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTTGTAATGTTGG	2446	False	NA	-18	True	AATAAA	-24	NA	38533866	38478047	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_38478301_38480708_38480861_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533369_38533464_38533660
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070215	chr2	-	935	7	NIC	ENSMUSG00000026750.7	novel	1160	8	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	19	junction_2	645.680175387853	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTTGTAATGTTGG	2379	False	NA	-18	True	AATAAA	-24	NA	38533933	38478047	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_38478301_38480708_38480861_38523862_38523979_38530084_38530226_38532189_38532288_38533369_38533464_38533852
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070221	chr2	-	998	8	NNC	ENSMUSG00000026750.7	novel	1160	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	598.951669202797	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTTGTAATGTTGG	2379	False	NA	-18	True	AATAAA	-24	NA	38533933	38478047	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_38478301_38480704_38480861_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533369_38533464_38533852
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070223	chr2	-	1004	8	NNC	ENSMUSG00000026750.7	novel	1160	8	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	614.944696368573	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTTGTAATGTTGG	2373	False	NA	-18	True	AATAAA	-24	NA	38533939	38478047	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_38478301_38480708_38480861_38503439_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533369_38533464_38533852
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070234	chr2	-	255	1	NIC	ENSMUSG00000026750.7	novel	1160	8	NA	NA	55630	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTTGTAATGTTGG	6384	False	NA	-18	True	AATAAA	-24	NA	38478302	38478047	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_38478000_38478300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070255	chr2	-	461	4	NNC	ENSMUSG00000062997.7	novel	946	4	NA	NA	-40	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16799.5275528808	229	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTTCATGTTTTACA	NA	False	NA	-10	True	AATAAA	-18	NA	38895174	38891592	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_38891756_38894118_38894201_38894743_38894881_38895095
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070262	chr2	-	476	4	NNC	ENSMUSG00000062997.7	novel	946	4	NA	NA	-39	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16799.5275528808	83	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTTCATGTTTTACA	NA	False	NA	-10	True	AATAAA	-18	NA	38895173	38891592	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_38891772_38894118_38894201_38894743_38894881_38895095
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070267	chr2	-	523	5	Fusion	ENSMUSG00000026754.17_ENSMUSG00000062997.7	novel	946	4	NA	NA	1757	-1	multi-exon	FALSE	canonical	0	0	junction_4	16312.9057650683	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTTCATGTTTTACA	NA	False	NA	-10	True	AATAAA	-18	NA	38906661	38891592	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr2_-_38891778_38894118_38894201_38894743_38894881_38895095_38895172_38906618
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070269	chr2	-	495	5	Fusion	ENSMUSG00000026754.17_ENSMUSG00000062997.7	novel	946	4	NA	NA	1757	-1	multi-exon	FALSE	canonical	0	0	junction_4	16312.9057650683	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTTCATGTTTTACA	NA	False	NA	-10	True	AATAAA	-18	NA	38906661	38891592	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr2_-_38891778_38894118_38894201_38894743_38894881_38895095_38895172_38906646
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070270	chr2	-	447	4	NNC	ENSMUSG00000062997.7	novel	946	4	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16635.847164749	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTTCATGTTTTACA	NA	False	NA	-10	True	AATAAA	-18	NA	38895143	38891592	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_38891778_38894118_38894196_38894743_38894881_38895095
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070272	chr2	-	490	5	Fusion	ENSMUSG00000026754.17_ENSMUSG00000062997.7	novel	946	4	NA	NA	1757	-1	multi-exon	FALSE	canonical	0	0	junction_4	16312.9057650683	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTTCATGTTTTACA	NA	False	NA	-10	True	AATAAA	-18	NA	38906661	38891592	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr2_-_38891778_38894118_38894201_38894743_38894881_38895095_38895169_38906648
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070274	chr2	-	464	4	NNC	ENSMUSG00000062997.7	novel	946	4	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	18823.4659047336	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTTCATGTTTTACA	NA	False	NA	-10	True	AATAAA	-18	NA	38895137	38891592	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_38891778_38894118_38894201_38894743_38894899_38895095
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070275	chr2	-	370	3	NIC	ENSMUSG00000062997.7	novel	946	4	NA	NA	-9	-1	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	13890	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTTCATGTTTTACA	NA	False	NA	-10	True	AATAAA	-18	NA	38895143	38891592	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_38891778_38894743_38894881_38895095
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070276	chr2	-	445	4	NNC	ENSMUSG00000062997.7	novel	946	4	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	16635.3962848967	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTTCATGTTTTACA	NA	False	NA	-10	True	AATAAA	-18	NA	38895137	38891592	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_38891778_38894118_38894196_38894739_38894881_38895095
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070288	chr2	-	492	5	Fusion	ENSMUSG00000026754.17_ENSMUSG00000062997.7	novel	946	4	NA	NA	1757	-1	multi-exon	FALSE	canonical	0	0	junction_4	16312.9057650683	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTTCATGTTTTACA	NA	False	NA	-10	True	AATAAA	-18	NA	38906661	38891592	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr2_-_38891778_38894118_38894201_38894743_38894881_38895095_38895169_38906646
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070291	chr2	-	989	3	NIC	ENSMUSG00000062997.7	novel	946	4	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	27807	junction_2	5946.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTTCATGTTTTACA	NA	False	NA	-10	True	AATAAA	-18	NA	38895137	38891592	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_38891778_38894118_38894881_38895095
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070346	chr2	+	1771	1	FSM	ENSMUSG00000082536.2	ENSMUST00000118928.2	1365	1	-68	-338	-68	338	mono-exon	FALSE	NA	NA	NA	NA	NA	1829	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGAAGATCGCAGAAGAT	NA	False	NA	NA	False	ATTAAA	-40	NA	40445695	40447466	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_40445700_40447500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070353	chr2	+	388	2	Genic_Genomic	ENSMUSG00000082536.2	novel	1365	1	NA	NA	1267	337	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAGAAGATCGCAGAAGA	NA	False	NA	NA	False	ATTAAA	-39	NA	40447030	40447465	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_40447295_40447341
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070358	chr2	+	398	2	Genic_Genomic	ENSMUSG00000082536.2	novel	1365	1	NA	NA	1267	337	multi-exon	TRUE	canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAGAAGATCGCAGAAGA	NA	False	NA	NA	False	ATTAAA	-39	NA	40447030	40447465	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_40447305_40447341
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070362	chr2	+	402	2	Genic_Genomic	ENSMUSG00000082536.2	novel	1365	1	NA	NA	1267	337	multi-exon	TRUE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAGAAGATCGCAGAAGA	NA	False	NA	NA	False	ATTAAA	-39	NA	40447030	40447465	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_40447309_40447341
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070368	chr2	-	1218	5	ISM	ENSMUSG00000049252.18	ENSMUST00000167270.5	10071	63	486065	480405	486065	268	internal_fragment	FALSE	canonical	1	1	junction_1	0.433012701892219	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTATAAAGCTTTTTTCTT	NA	False	NA	NA	False	ATTAAA	-22	NA	41193025	41171809	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_41172277_41174106_41174239_41185476_41185722_41186007_41186173_41192816
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070384	chr2	-	1034	2	NNC	ENSMUSG00000081999.4	novel	662	2	NA	NA	-37	347	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	25	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGAATCATCCCTTGCT	NA	False	NA	NA	False	AATAAA	-23	NA	41878878	41877137	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_41878022_41878728
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070387	chr2	+	449	2	Intergenic	novelGene_229	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	84	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTAGATAGAGCATGAAGA	NA	False	NA	NA	False	NA	NA	NA	43085686	43086577	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_+_43085874_43086315
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070455	chr2	-	1298	8	FSM	ENSMUSG00000026766.17	ENSMUST00000134480.8	803	8	-26	-469	4	0	multi-exon	FALSE	canonical	3	69	junction_6	199.415574689068	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTGTTTTTTATTGCA	NA	False	NA	0	True	AATAAA	-20	NA	50186725	50169892	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182926_50186263_50186322_50186654
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070494	chr2	+	713	5	ISM	ENSMUSG00000036202.17	ENSMUST00000145130.8	2789	14	13860	-14	-7551	14	3prime_fragment	FALSE	canonical	3	447	junction_4	29.2232783924049	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAACTGTCGGCCAAAGT	NA	False	NA	60	True	GATAAA	-10	NA	51993444	51997751	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070510	chr2	-	3014	14	FSM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	6	1697	-4	-1697	multi-exon	FALSE	canonical	3	181	junction_4	18.080359738789	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGAAATCTTATCGTTTA	NA	False	NA	-5	True	ATTAAA	-18	NA	52632206	52583372	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070522	chr2	+	2577	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	-17	-12	-17	12	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	586	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAAGGTTAAAGTTATTA	NA	False	NA	36	True	ATTAAA	-29	NA	53082082	53109244	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070531	chr2	-	778	1	FSM	ENSMUSG00000083287.5	ENSMUST00000121574.2	684	1	-58	-36	-58	36	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGGTTTGGTTTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	53586874	53586096	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_53586100_53586900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070535	chr2	+	243	1	ISM	ENSMUSG00000026827.13	ENSMUST00000141536.8	2176	12	129798	178	100056	-178	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGGTGTGTTTGCCAA	NA	False	NA	122	True	AAAACA	-14	NA	57257444	57257687	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_57257400_57257700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070557	chr2	-	1169	8	ISM	ENSMUSG00000026987.17	ENSMUST00000090925.13	7576	34	80027	14720	-2228	15	internal_fragment	FALSE	canonical	3	134	junction_4	23.0013309286614	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTAAAAAGGCAGAGAGTC	NA	False	NA	NA	False	AAAAAG	-5	NA	59756504	59744508	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070566	chr2	-	477	2	FSM	ENSMUSG00000026987.17	ENSMUST00000134908.2	406	2	-70	-1	-17	0	multi-exon	FALSE	canonical	3	22	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTAATTGACTTCTGC	9133	False	NA	NA	False	AATAAA	-17	NA	60040162	60036936	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_60037308_60040056
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070588	chr2	-	1540	1	Genic_Genomic	ENSMUSG00000026980.16	novel	NA	NA	NA	NA	89595	6	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGGCTCAGTGTTTC	1837	False	NA	-5	True	AATAAA	-26	NA	60123980	60122440	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_-_60122400_60124000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070631	chr2	+	202	1	Intergenic	novelGene_230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACCAGATTTCGACTCT	NA	False	NA	NA	False	AAAAAG	-4	NA	60325242	60325444	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_+_60325200_60325400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070682	chr2	+	397	1	Genic_Genomic	ENSMUSG00000026914.16	novel	NA	NA	NA	NA	23404	2	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCGAGGTCTTTTTGGC	3357	False	NA	33	True	AATAAA	-19	NA	61630325	61630722	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_61630300_61630700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070693	chr2	+	222	1	Intergenic	novelGene_231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACAGTAGCAATATCAAC	NA	False	NA	NA	False	NA	NA	NA	62188540	62188762	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_+_62188500_62188800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070708	chr2	-	226	1	FSM	ENSMUSG00000082127.3	ENSMUST00000121365.3	205	1	74	-95	74	95	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTAAGATTTGTTTT	NA	False	NA	NA	False	AAGAAA	-16	NA	64305219	64304993	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_64305000_64305200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070718	chr2	-	691	2	Intergenic	novelGene_232	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTTCCATGTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	65604314	65603269	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_-_65603688_65604041
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070722	chr2	+	2373	6	FSM	ENSMUSG00000044647.17	ENSMUST00000053910.10	4495	6	0	2122	0	0	multi-exon	FALSE	canonical	2	6	junction_1	3.18747549010185	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTATTTTATTTATG	5678	False	NA	13	True	AAAAAG	-12	NA	65676185	65853828	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_65676229_65708308_65708397_65779302_65779474_65832646_65832907_65849783_65850081_65852314
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070736	chr2	-	984	2	Intergenic	novelGene_233	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTGTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	68958823	68956604	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_-_68957427_68958661
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070752	chr2	-	1397	8	NIC	ENSMUSG00000005233.17	novel	1527	7	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	382.063356216303	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTAACTCTCTCTTC	NA	False	NA	-10	True	NA	NA	NA	69036530	69024238	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036173_69036227_69036407
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070758	chr2	-	653	1	NIC	ENSMUSG00000005233.17	novel	1527	7	NA	NA	10583	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTAACTCTCTCTTC	NA	False	NA	-10	True	NA	NA	NA	69024891	69024238	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_69024200_69024900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070761	chr2	+	230	1	Intergenic	novelGene_234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCAAAGATGAAGGGGCA	4022	False	NA	NA	False	NA	NA	NA	69398516	69398746	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_+_69398500_69398700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070777	chr2	+	1346	1	ISM	ENSMUSG00000042133.17	ENSMUST00000090858.10	6127	14	26467	3395	7603	1069	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGTAATACTGTGTG	NA	False	NA	NA	False	AATAAA	-25	NA	69579615	69580961	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_69579600_69581000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070782	chr2	+	2241	4	FSM	ENSMUSG00000027088.11	ENSMUST00000028494.9	2260	4	19	0	-5	0	multi-exon	FALSE	canonical	3	95	junction_2	4.49691252107735	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTTCTGAAATCTTTT	NA	False	NA	26	True	AATAAA	-16	NA	69619998	69627567	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_69620301_69620629_69620666_69622680_69622836_69625819
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070790	chr2	+	962	1	ISM	ENSMUSG00000027088.11	ENSMUST00000028494.9	2260	4	6626	0	5290	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTTCTGAAATCTTTT	NA	False	NA	26	True	AATAAA	-16	NA	69626605	69627567	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_69626600_69627600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070815	chr2	+	1545	10	NNC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	-60	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	841.090136242217	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCAATAGTTCTTTCTTC	NA	False	NA	12	True	TATAAA	-3	NA	69693574	69701852	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69700178_69700365_69700728_69700925_69701067_69701169_69701435
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070825	chr2	-	901	6	FSM	ENSMUSG00000051730.16	ENSMUST00000142127.8	851	6	-28	-22	-10	6	multi-exon	FALSE	canonical	3	48	junction_3	209.013492387453	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCTTTTCTTATGCTT	6796	False	NA	1	True	AATAAA	-40	NA	69715969	69701535	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_69701661_69702075_69702126_69704227_69704280_69711110_69711293_69711640_69711756_69715592
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070860	chr2	+	746	1	FSM	ENSMUSG00000047965.10	ENSMUST00000140507.2	579	1	-26	-141	-26	141	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATGTTTAGGCTAAATA	NA	False	NA	NA	False	NA	NA	NA	70289299	70290045	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_70289300_70290000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070867	chr2	+	1223	2	NNC	ENSMUSG00000014959.13	novel	2417	11	NA	NA	2563	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTTCTAAGTGGCG	NA	False	NA	20	True	AATAAA	-20	NA	70520719	70522069	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_70520875_70521001
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070873	chr2	-	1464	1	NIC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	-13752	-14201	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTAGTCATTGTAATTC	NA	False	NA	NA	False	AATAAA	-22	NA	70562320	70560856	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_70560900_70562300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070886	chr2	-	644	2	NNC	ENSMUSG00000041975.18	novel	2254	10	NA	NA	-1	-53466	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTACATGTTTTGTTTA	NA	False	NA	NA	False	NA	NA	NA	70885928	70877154	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_70877585_70885714
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070893	chr2	+	2491	14	FSM	ENSMUSG00000041966.19	ENSMUST00000154704.8	7739	14	0	5248	0	332	multi-exon	FALSE	canonical	3	168	junction_11	23.2697075602773	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATATCAATTCTAGTTTT	NA	False	NA	3	True	NA	NA	NA	70886087	70920954	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070903	chr2	+	2500	16	FSM	ENSMUSG00000027012.16	ENSMUST00000081710.12	2631	16	131	0	-7	0	multi-exon	FALSE	canonical	3	499	junction_2	40.1836893389456	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCACTTTTACTTTTTGA	NA	False	NA	24	True	AATAAA	-26	NA	71042308	71093647	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_71042419_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070920	chr2	+	1755	11	FSM	ENSMUSG00000027018.12	ENSMUST00000028408.3	1576	11	-227	48	75	-48	multi-exon	FALSE	canonical	3	1873	junction_8	150.054156890104	9210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATAATGTGGTGCTTAAG	4891	False	NA	11	True	AATAAA	-22	NA	71219376	71271918	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_71219649_71220246_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070947	chr2	+	1494	11	NNC	ENSMUSG00000027018.12	novel	1576	11	NA	NA	-16	-102	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	659.429298712152	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACTGCTTTCTTCTTAA	5102	False	NA	22	True	AATAAA	-23	NA	71219587	71271864	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_71219649_71220246_71220343_71239331_71239412_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070965	chr2	+	1369	10	NNC	ENSMUSG00000027018.12	novel	1576	11	NA	NA	693	-107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	679.380073265781	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCCCACTGCTTTCTT	5811	False	NA	17	True	AATAAA	-18	NA	71220296	71271859	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251655_71251976_71252084_71264398_71264551_71269039_71269157_71271511
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000070968	chr2	+	1257	9	NIC	ENSMUSG00000027018.12	novel	1576	11	NA	NA	693	-107	combination_of_known_splicesites	FALSE	canonical	2	53	junction_8	713.23243055823	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCCCACTGCTTTCTT	5811	False	NA	17	True	AATAAA	-18	NA	71220296	71271859	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71271511
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071028	chr2	+	287	1	ISM	ENSMUSG00000006494.12	ENSMUST00000006669.6	5185	11	28476	1872	14282	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGCCCTCTCCAAGGA	NA	False	NA	11	True	AATAAA	-23	NA	71732043	71732330	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_71732000_71732300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071034	chr2	+	2425	9	FSM	ENSMUSG00000055612.16	ENSMUST00000102691.11	2424	9	-1	0	-1	0	multi-exon	FALSE	canonical	3	1115	junction_3	87.0351042683353	314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTTTATTTTTGTTT	8568	False	NA	NA	False	AATAAA	-16	NA	72306501	72317237	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071058	chr2	+	452	3	NNC	ENSMUSG00000063714.16	novel	583	3	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	98	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATCTCCTGCAAGCTTG	NA	False	NA	20	True	NA	NA	NA	72809821	72818951	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_72809933_72817871_72817977_72818715
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071065	chr2	-	775	1	Genic_Genomic	ENSMUSG00000027108.16	novel	NA	NA	NA	NA	119386	1	mono-exon	FALSE	NA	NA	NA	NA	NA	359	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCGTTTCTAAGGGGTT	NA	False	NA	-12	True	ATTAAA	-15	NA	72923918	72923143	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_-_72923100_72923900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071067	chr2	-	2163	11	FSM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	13	-1	-8	1	multi-exon	FALSE	canonical	3	336	junction_4	35.4120036145937	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCGTTTCTAAGGGGTT	NA	False	NA	-12	True	ATTAAA	-15	NA	73044778	72923143	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_72924069_72927488_72927612_72929635_72929733_72930417_72930559_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071072	chr2	-	1697	11	NNC	ENSMUSG00000027108.16	novel	2175	11	NA	NA	-38	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	128.065647228287	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGTTTGGGGAT	NA	False	NA	-2	True	AATAAA	-17	NA	73044715	72923542	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_72924069_72927488_72927608_72929635_72929733_72930417_72930559_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071081	chr2	-	933	8	NNC	ENSMUSG00000027108.16	novel	905	8	NA	NA	-32	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	182.724952218533	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGTGTTTTGTTCAATG	NA	False	NA	-1	True	AATAAA	-19	NA	73044709	72967870	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_72968000_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029869_73033668_73033813_73043203_73043305_73044629
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071103	chr2	+	1895	4	FSM	ENSMUSG00000008226.15	ENSMUST00000112050.2	1897	4	2	0	2	0	multi-exon	FALSE	canonical	3	91	junction_1	8.65383665716478	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGATTACTTTGGTTGTA	NA	False	NA	NA	False	AATAAA	-36	NA	73142999	73151140	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071107	chr2	+	3251	8	FSM	ENSMUSG00000008226.15	ENSMUST00000090811.11	3309	8	58	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	26.8791702981764	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTTGATCTTTGATAAA	NA	False	NA	NA	False	AATAAA	-30	NA	73143002	73168162	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646_73149844_73152328_73152539_73160106_73160270_73161326_73161502_73166054
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071113	chr2	+	1092	1	Genic_Genomic	ENSMUSG00000008226.15	novel	NA	NA	NA	NA	311	6	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTTGGTTGTATCAATG	NA	False	NA	NA	False	AATAAA	-42	NA	73150054	73151146	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_73150100_73151100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071116	chr2	+	407	1	NIC	ENSMUSG00000008226.15	novel	3309	8	NA	NA	2665	449	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTTTGTTTGTTTGTAT	NA	False	NA	NA	False	ATTAAA	-22	NA	73152408	73152815	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_73152400_73152800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071129	chr2	-	743	1	ISM	ENSMUSG00000056486.19	ENSMUST00000112024.10	4050	13	162268	1676	12591	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAATAGCTTTTTTTCTT	9267	False	NA	59	True	ATTAAA	-23	NA	73443422	73442679	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_73442700_73443400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071156	chr2	-	693	5	NNC	ENSMUSG00000018770.10	novel	723	5	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1912.90464673491	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741645	73738790	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_73739052_73739527_73739712_73740203_73740286_73741298_73741405_73741585
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071162	chr2	-	689	5	NNC	ENSMUSG00000018770.10	novel	723	5	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1875.22696959595	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741643	73738790	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741397_73741585
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071163	chr2	-	493	4	NIC	ENSMUSG00000018770.10	novel	714	5	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	1757.29356303	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741643	73738790	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_73739052_73740207_73740286_73741298_73741405_73741595
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071165	chr2	-	686	5	NNC	ENSMUSG00000018770.10	novel	723	5	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1912.90464673491	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741642	73738790	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_73739052_73739527_73739712_73740207_73740286_73741298_73741405_73741585
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071166	chr2	-	644	5	NNC	ENSMUSG00000018770.10	novel	714	5	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	1838.901897193	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741643	73738790	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_73739052_73739570_73739722_73740207_73740286_73741298_73741405_73741595
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071173	chr2	-	701	5	NNC	ENSMUSG00000018770.10	novel	723	5	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1912.90464673491	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741643	73738790	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_73739052_73739527_73739722_73740203_73740286_73741298_73741405_73741585
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071178	chr2	-	677	5	NNC	ENSMUSG00000018770.10	novel	714	5	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1845.53750639211	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741643	73738790	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_73739052_73739537_73739722_73740207_73740286_73741298_73741405_73741595
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071209	chr2	-	1174	4	NIC	ENSMUSG00000018770.10	novel	723	5	NA	NA	-9	0	intron_retention	FALSE	canonical	3	880	junction_3	1670.03240154861	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741644	73738790	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_73739722_73740207_73740286_73741298_73741405_73741585
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071216	chr2	-	1660	3	NIC	ENSMUSG00000018770.10	novel	723	5	NA	NA	-9	0	intron_retention	FALSE	canonical	3	880	junction_2	1713.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741644	73738790	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_73740286_73741298_73741405_73741585
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071237	chr2	+	1250	10	FSM	ENSMUSG00000027099.10	ENSMUST00000028511.8	2950	10	8	1692	8	235	multi-exon	FALSE	canonical	3	767	junction_7	57.1160827926797	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTCATTTACTTTGA	NA	False	NA	17	True	AATAAA	-15	NA	74656154	74707083	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_74656388_74677581_74677630_74678642_74678690_74689748_74689822_74697214_74697292_74698663_74698757_74699226_74699266_74699647_74699774_74700751_74700829_74706646
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071249	chr2	-	745	2	Genic_Genomic	ENSMUSG00000081406.5	novel	750	1	NA	NA	-33	77	multi-exon	FALSE	canonical	0	0	junction_1	0	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTCAAATGGCACAACAA	NA	False	NA	NA	False	NA	NA	NA	75022199	75021339	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_-_75021913_75022027
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071253	chr2	+	860	1	Antisense	novelGene_ENSMUSG00000081406.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATTTTCTATTTTAACAA	NA	False	NA	NA	False	NA	NA	NA	75021339	75022199	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr2_+_75021300_75022200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071282	chr2	-	514	2	Intergenic	novelGene_235	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAGGCTTACCACGAGGCT	2125	False	NA	NA	False	NA	NA	NA	75465693	75464972	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_-_75465185_75465391
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071285	chr2	+	2358	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	-38	-666	-38	384	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGCTGGCATGCTTTC	7437	False	NA	20	True	AATAAA	-20	NA	75489566	75496849	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071317	chr2	-	2277	5	NNC	ENSMUSG00000015839.7	novel	2475	5	NA	NA	508	-3	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_4	215.843693445048	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTTGGACTTTTTGAAT	NA	False	NA	-2	True	AATAAA	-19	NA	75534325	75505859	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_75507529_75507888_75508057_75508831_75508922_75509506_75509774_75534242
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071324	chr2	+	640	1	Intergenic	novelGene_236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAATAGGCTGTTTCTTT	475	False	NA	NA	False	AATAAA	-24	NA	75582922	75583562	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_+_75582900_75583600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071377	chr2	+	541	2	FSM	ENSMUSG00000042359.19	ENSMUST00000133275.2	593	2	53	-1	0	1	multi-exon	FALSE	canonical	3	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAACTTTGTTTTCCTCCT	NA	False	NA	NA	False	ATTAAA	-19	NA	76236904	76238276	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_76237034_76237864
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071380	chr2	+	1067	4	ISM	ENSMUSG00000042359.19	ENSMUST00000111930.9	3853	25	185259	18	23697	-18	3prime_fragment	FALSE	canonical	3	41	junction_2	1.69967317119759	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCATAGGTGTATGTGAA	NA	False	NA	NA	False	AATAAA	-17	NA	76422160	76426922	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_76422273_76423683_76423811_76425107_76425231_76426217
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071387	chr2	-	842	6	ISM	ENSMUSG00000002731.7	ENSMUST00000002808.7	1614	8	-23	6846	-23	51	5prime_fragment	TRUE	canonical	3	42	junction_4	3.65513337649941	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCCCTTCATTTCTTGT	NA	False	NA	NA	False	AATAAA	-21	NA	76478382	76467087	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_76467234_76469543_76469662_76470584_76470664_76473566_76473649_76477468_76477639_76478135
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071403	chr2	+	438	3	ISM	ENSMUSG00000002733.9	ENSMUST00000111920.2	2534	8	7530	9321	-7042	-5257	internal_fragment	FALSE	canonical	3	231	junction_1	20.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTTCGTGTGTATGTG	NA	False	NA	7	True	ATTAAA	-7	NA	76513154	76517851	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_76513230_76516962_76517100_76517625
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071423	chr2	-	580	5	NIC	ENSMUSG00000027014.15	novel	511	4	NA	NA	0	40	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	123.370377319679	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTACTCTTGTTCCTC	NA	False	NA	NA	False	AATAAA	-26	NA	77776527	77761078	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_77761319_77761778_77761890_77763042_77763108_77766936_77767067_77776493
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071438	chr2	+	520	2	Intergenic	novelGene_237	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACTTTTCTTCCTCTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	80055380	80063668	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_+_80055482_80063249
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071461	chr2	+	1841	9	FSM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	-12	-270	-12	266	multi-exon	FALSE	canonical	3	149	junction_4	57.0169930810105	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTATTTGTTGTTGTGC	NA	False	NA	NA	False	AATACA	-30	NA	80469147	80489516	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488664
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071464	chr2	+	1545	9	NNC	ENSMUSG00000026999.15	novel	1559	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	106.328500412636	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTTTGGAAGGTTGAT	NA	False	NA	16	True	AATAAA	-25	NA	80469174	80489250	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485204_80486292_80486422_80487532_80487698_80488664
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071500	chr2	-	185	1	Intergenic	novelGene_238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCACACTGTTCTGCCA	NA	False	NA	NA	False	NA	NA	NA	83524405	83524220	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_-_83524200_83524400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071509	chr2	+	361	1	Intergenic	novelGene_239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTAATTTTCATTGTC	NA	False	NA	NA	False	AATAAA	-20	NA	83823607	83823968	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_+_83823600_83824000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071530	chr2	-	356	1	ISM	ENSMUSG00000034101.15	ENSMUST00000111696.8	6281	19	49607	712	8539	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	2812	False	NA	-38	True	AATAAA	-16	NA	84431482	84431126	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_84431100_84431500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071546	chr2	-	777	3	ISM	ENSMUSG00000076437.12	ENSMUST00000102647.11	654	4	-25	-6	-25	0	intron_retention	FALSE	canonical	3	329	junction_1	943.5	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTTTAAATTTTGTCTT	333	False	NA	-8	True	AATAAA	-25	NA	84501077	84499558	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_84499742_84500355_84500461_84500588
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071616	chr2	+	953	5	NNC	ENSMUSG00000027080.7	novel	2059	5	NA	NA	23	-863	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	205.27359791264	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCATTTTGTATTATTTA	3380	False	NA	NA	False	NA	NA	NA	84508768	84516980	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534_84516630_84516713
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071622	chr2	-	1359	2	ISM	ENSMUSG00000034075.11	ENSMUST00000035840.6	4706	12	25282	165	24788	-165	3prime_fragment	FALSE	canonical	3	304	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTGACTTGTGTTTTGT	NA	False	NA	0	True	AATAAA	-23	NA	84520242	84518478	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_84519789_84520193
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071629	chr2	-	1083	1	ISM	ENSMUSG00000027079.16	ENSMUST00000165219.8	2564	4	3041	1015	3041	3	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGATTCTTTTTTTAAT	NA	False	NA	-18	True	AATAAA	-20	NA	84554545	84553462	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_84553500_84554500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071644	chr2	-	371	1	Genic_Genomic	ENSMUSG00000023224.13	novel	NA	NA	NA	NA	9398	27	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGTGTACTAGTTCCC	5457	False	NA	1	True	AATAAA	-28	NA	84596074	84595703	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_-_84595700_84596100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071676	chr2	-	538	2	ISM	ENSMUSG00000027077.8	ENSMUST00000028471.6	1761	8	7188	0	7188	0	3prime_fragment	FALSE	canonical	3	139	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGTGGCAGTTTGCC	4957	False	NA	-19	True	AATAAA	-19	NA	84645808	84641519	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_84641884_84645634
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071689	chr2	+	649	3	NNC	ENSMUSG00000027076.11	novel	690	3	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	201.5	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGTGTCTTTACTTGAGA	6386	False	NA	10	True	ATTAAA	-15	NA	84657309	84660557	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_84657420_84657942_84658058_84660133
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071691	chr2	+	656	3	NNC	ENSMUSG00000027076.11	novel	690	3	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	204	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGTGTCTTTACTTGAGA	6386	False	NA	10	True	ATTAAA	-15	NA	84657309	84660557	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_84657427_84657942_84658058_84660133
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071702	chr2	+	626	3	NNC	ENSMUSG00000027076.11	novel	690	3	NA	NA	55	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	186.5	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGTGTCTTTACTTGAGA	6472	False	NA	10	True	ATTAAA	-15	NA	84657395	84660557	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_84657492_84657942_84658058_84660142
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071736	chr2	+	469	1	Genic_Genomic	ENSMUSG00000027067.17	novel	NA	NA	NA	NA	1289	3	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTATGTCTCCTTTCC	NA	False	NA	26	True	AATAAA	-22	NA	84876987	84877456	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_84877000_84877500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071750	chr2	+	753	1	FSM	ENSMUSG00000082908.5	ENSMUST00000119272.2	253	1	-117	-383	-117	383	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAAGGAGTCTACCTGAG	NA	False	NA	NA	False	AATAAA	-45	NA	87356371	87357124	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_87356400_87357100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071760	chr2	+	560	1	FSM	ENSMUSG00000091703.3	ENSMUST00000165784.3	470	1	0	-90	0	90	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGATGTCGTTAATTT	NA	False	NA	NA	False	AATAAA	-30	NA	89978762	89979322	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_89978800_89979300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071791	chr2	+	1143	12	FSM	ENSMUSG00000027282.18	ENSMUST00000111467.4	2281	12	-106	1244	-11	5	multi-exon	FALSE	canonical	3	421	junction_3	644.761587047671	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGTCTGCCTTTTTTG	108	False	NA	56	True	NA	NA	NA	90677510	90695740	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071821	chr2	+	1064	12	NNC	ENSMUSG00000027282.18	novel	2281	12	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	943.606629414175	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATTGGTGTCTGCCTTT	179	False	NA	52	True	NA	NA	NA	90677581	90695736	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_90677730_90679714_90679800_90679941_90680049_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691790_90693933_90694010_90695527
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071848	chr2	+	1049	13	NNC	ENSMUSG00000027282.18	novel	2596	13	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	1	24	junction_2	709.189776356716	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATTGGTGTCTGCCTTT	220	False	NA	52	True	NA	NA	NA	90677622	90695736	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_90677730_90679714_90679800_90679946_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071879	chr2	+	211	1	NIC	ENSMUSG00000027282.18	novel	2596	13	NA	NA	1723	1	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATTGGTGTCTGCCTTT	NA	False	NA	52	True	NA	NA	NA	90695525	90695736	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_90695500_90695700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071892	chr2	-	909	7	NNC	ENSMUSG00000005510.10	novel	1046	7	NA	NA	10	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	721.928609120505	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGGTGGTTGTTTTTT	NA	False	NA	-3	True	AATAAA	-24	NA	90735036	90724971	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_90725222_90728727_90728848_90728980_90729107_90732706_90732857_90733190_90733289_90734766_90734833_90734937
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000071929	chr2	-	645	1	FSM	ENSMUSG00000082108.4	ENSMUST00000118208.2	345	1	-259	-41	-259	41	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGGCTGGTCTCACTTGT	NA	False	NA	-14	True	AATAAA	-15	NA	90861726	90861081	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_90861100_90861700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072002	chr2	+	1767	10	NIC	ENSMUSG00000027257.14	novel	1862	11	NA	NA	-2	-8	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	17.8519286920123	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTTGTGAGCGTCTT	4773	False	NA	11	True	AATAAA	-8	NA	91087180	91095015	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_91087272_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072005	chr2	+	2739	16	FSM	ENSMUSG00000027255.15	ENSMUST00000080008.13	3068	16	329	0	10	0	multi-exon	FALSE	canonical	3	197	junction_10	19.1619994317457	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTCTCCGTCCTGCCT	5831	False	NA	NA	False	AATAAA	-25	NA	91095647	91107276	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072021	chr2	-	226	1	Intergenic	novelGene_240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCAGACGGAGTCTCTCA	2164	False	NA	NA	False	NA	NA	NA	91200504	91200278	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_-_91200300_91200500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072025	chr2	-	378	3	FSM	ENSMUSG00000040591.19	ENSMUST00000139490.8	307	3	-70	-1	-3	1	multi-exon	FALSE	canonical	3	7	junction_1	64	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTCTTTTTTCTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	91275052	91249127	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_91249264_91252210_91252314_91274913
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072046	chr2	+	390	1	ISM	ENSMUSG00000027247.17	ENSMUST00000111329.8	3201	14	22076	1	2005	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	3955	False	NA	NA	False	AATAAA	-18	NA	91502280	91502670	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_91502300_91502700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072060	chr2	-	855	5	FSM	ENSMUSG00000027239.15	ENSMUST00000069423.13	773	5	-51	-31	-51	8	multi-exon	FALSE	canonical	3	1617	junction_4	477.436121381699	3304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTCCCAGTTTGCCATGG	NA	False	NA	NA	False	AATAAA	-45	NA	91762176	91760141	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91762038
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072075	chr2	-	777	5	NNC	ENSMUSG00000027239.15	novel	773	5	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	canonical	3	184	junction_3	1066.58860391437	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTTTTTTAATATATAAAA	NA	False	NA	NA	False	AATAAA	-28	NA	91762125	91760163	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_91760461_91761162_91761325_91761440_91761595_91761716_91761794_91762038
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072076	chr2	-	981	4	ISM	ENSMUSG00000027239.15	ENSMUST00000069423.13	773	5	46	-9	-35	9	intron_retention	FALSE	canonical	3	2268	junction_3	242.697342383472	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTTTTTTAATATATAAAA	NA	False	NA	NA	False	AATAAA	-28	NA	91762079	91760163	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072096	chr2	-	762	5	NNC	ENSMUSG00000027239.15	novel	1054	5	NA	NA	-223	7	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_4	1314.65099931503	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCTTTTTTAATATATAA	NA	False	NA	NA	False	AATAAA	-26	NA	91762348	91760165	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_91760461_91761162_91761325_91761440_91761595_91761716_91761794_91762274
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072099	chr2	-	665	4	NIC	ENSMUSG00000027239.15	novel	773	5	NA	NA	38	7	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	1306.57797318032	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCTTTTTTAATATATAA	NA	False	NA	NA	False	AATAAA	-26	NA	91762087	91760165	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_91760461_91761162_91761325_91761440_91761600_91762038
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072100	chr2	-	879	5	NNC	ENSMUSG00000027239.15	novel	714	5	NA	NA	-25	7	at_least_one_novel_splicesite	FALSE	canonical	3	184	junction_3	1224.54468579142	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCTTTTTTAATATATAA	NA	False	NA	NA	False	AATAAA	-26	NA	91762069	91760165	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_91760461_91761162_91761325_91761440_91761595_91761716_91761794_91761878
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072128	chr2	+	191	1	Intergenic	novelGene_241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTTAGTTATTTCAT	1442	False	NA	NA	False	NA	NA	NA	91965316	91965507	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_+_91965300_91965500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072178	chr2	-	2137	15	NNC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-46179	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	23.9396562810986	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCAGGCCTGCTTTATTT	NA	False	NA	-1	True	AATAAA	-22	NA	93745681	93685706	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93745631
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072199	chr2	-	1171	9	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	40.6799628195504	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATCCAAAAGCTTTTTG	8851	False	NA	1	True	ATTAAA	-28	NA	93841099	93810973	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_93811323_93811860_93811960_93826527_93826738_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93841027
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072200	chr2	-	1406	11	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	43.1723291009415	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATCCAAAAGCTTTTTG	8851	False	NA	1	True	ATTAAA	-28	NA	93841099	93810973	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_93811323_93811860_93811960_93826527_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93840607_93840754_93841027
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072254	chr2	-	991	7	FSM	ENSMUSG00000027165.17	ENSMUST00000111231.10	2273	7	-41	1323	-22	20	multi-exon	FALSE	canonical	3	119	junction_5	14.4299072146089	343	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGCTGTATTCATTTGTC	NA	False	NA	0	True	AATAAA	-35	NA	101459376	101392448	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_101392700_101406356_101406497_101413865_101413933_101415588_101415661_101416656_101416815_101440868_101441021_101459225
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072272	chr2	+	1191	5	NNC	ENSMUSG00000027163.14	novel	1191	6	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.5467600870597	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGCTGGTCGTGGTTCTT	NA	False	NA	29	True	AATAAA	-25	NA	101716594	101731991	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_101716665_101725479_101725606_101727384_101727529_101730185_101730318_101731272
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072338	chr2	-	822	1	NIC	ENSMUSG00000027187.11	novel	2613	13	NA	NA	30302	-153	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACCGTGTTTGGTTGCTTT	NA	False	NA	-8	True	AATAAA	-16	NA	103285168	103284346	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_103284300_103285200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072344	chr2	-	919	4	ISM	ENSMUSG00000027185.16	ENSMUST00000143017.8	4107	28	35444	-2	-1324	-2	3prime_fragment	FALSE	canonical	3	323	junction_1	27.4023518860861	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103556098	103551602	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072350	chr2	-	1341	1	ISM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	31296	2072	5440	5	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	9168	False	NA	-6	True	AATAAA	-22	NA	103596698	103595357	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_103595400_103596700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072355	chr2	-	2487	10	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	21082	2089	-14	0	internal_fragment	FALSE	canonical	3	1726	junction_3	91.861006114915	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAGTACTGGTGGAAT	NA	False	NA	-9	True	NA	NA	NA	103606367	103597451	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072370	chr2	+	1580	1	ISM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	32202	1738	32063	-1501	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTACTGCTTATTAA	NA	False	NA	15	True	ATTAAA	-28	NA	103890267	103891847	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_103890300_103891800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072414	chr2	+	1526	4	NNC	ENSMUSG00000086454.8	novel	770	3	NA	NA	-24	116	at_least_one_novel_splicesite	FALSE	canonical	3	184	junction_1	171.663106759205	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTGTGTTAATGTCAT	NA	False	NA	28	True	AAGAAA	-24	NA	104389483	104399293	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_104389830_104390068_104390321_104398205_104398836_104398995
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072417	chr2	+	1399	3	FSM	ENSMUSG00000086454.8	ENSMUST00000127350.2	536	3	-44	-819	-15	116	multi-exon	FALSE	canonical	3	101	junction_1	238	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTGTGTTAATGTCAT	NA	False	NA	28	True	AAGAAA	-24	NA	104389492	104399293	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_104389552_104390068_104390321_104398205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072422	chr2	+	1756	3	NNC	ENSMUSG00000086454.8	novel	770	3	NA	NA	-15	116	intron_retention	FALSE	canonical	3	251	junction_2	163	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTGTGTTAATGTCAT	NA	False	NA	28	True	AAGAAA	-24	NA	104389492	104399293	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_104390321_104398205_104398836_104398995
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072438	chr2	+	1252	4	NNC	ENSMUSG00000086454.8	novel	536	3	NA	NA	-1	116	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	214.187353086549	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTGTGTTAATGTCAT	NA	False	NA	28	True	AAGAAA	-24	NA	104389522	104399293	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_104389595_104390068_104390321_104398205_104398836_104398995
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072445	chr2	+	1168	3	NIC	ENSMUSG00000086454.8	novel	582	4	NA	NA	-1	116	intron_retention	FALSE	canonical	3	23	junction_2	277	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTGTGTTAATGTCAT	NA	False	NA	28	True	AAGAAA	-24	NA	104389522	104399293	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_104390321_104398205_104398278_104398995
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072457	chr2	+	1411	3	NNC	ENSMUSG00000086454.8	novel	677	3	NA	NA	0	116	intron_retention	FALSE	canonical	3	58	junction_1	259.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTGTGTTAATGTCAT	NA	False	NA	28	True	AAGAAA	-24	NA	104389523	104399293	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_104389595_104390068_104390321_104398205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072461	chr2	+	1572	3	FSM	ENSMUSG00000086454.8	ENSMUST00000136364.8	677	3	0	-895	0	116	multi-exon	FALSE	canonical	3	45	junction_1	266	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTGTGTTAATGTCAT	NA	False	NA	28	True	AAGAAA	-24	NA	104389523	104399293	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_104389756_104390068_104390321_104398205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072475	chr2	+	629	4	NNC	ENSMUSG00000086454.8	novel	582	4	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	2	29	junction_3	251.772825292079	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGGTTCAAGCCTTTAA	NA	False	NA	NA	False	AATAAA	-23	NA	104389526	104401776	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_104389595_104390068_104390321_104398205_104398278_104401539
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072491	chr2	+	925	4	NIC	ENSMUSG00000086454.8	novel	582	4	NA	NA	-2	116	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	232.686245594554	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTGTGTTAATGTCAT	NA	False	NA	28	True	AAGAAA	-24	NA	104389526	104399293	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_104389830_104390068_104390321_104398205_104398278_104398995
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072493	chr2	+	1421	3	NNC	ENSMUSG00000086454.8	novel	770	3	NA	NA	-2	-7110	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	82	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	104389526	104391285	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_104389830_104390068_104390321_104390419
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072496	chr2	+	1418	3	NNC	ENSMUSG00000086454.8	novel	770	3	NA	NA	-2	-7110	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	77	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	104389526	104391285	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_104389830_104390068_104390321_104390422
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072502	chr2	+	1657	2	NNC	ENSMUSG00000086454.8	novel	707	2	NA	NA	-2	-7110	intron_retention	FALSE	canonical	3	30	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	104389526	104391285	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_104390321_104390422
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072528	chr2	-	183	1	Intergenic	novelGene_242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATATATTCAAAGATAATC	9725	False	NA	NA	False	NA	NA	NA	104484037	104483854	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_-_104483900_104484000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072543	chr2	-	592	1	ISM	ENSMUSG00000074994.7	ENSMUST00000117237.2	8973	12	58513	2797	58513	-2797	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTTGATTTATAACTGAT	1789	False	NA	NA	False	AATAAA	-16	NA	104588528	104587936	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_104587900_104588500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072558	chr2	-	1240	11	NNC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	691.711095761807	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTAATCTAGCTAATT	2691	False	NA	-16	True	AGTAAA	-17	NA	104847374	104830000	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_104830187_104830586_104830648_104831607_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072578	chr2	-	1599	10	FSM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	41	1408	-40	-1408	multi-exon	FALSE	canonical	3	175	junction_4	20.3548762623191	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCCTTAGAGTTGTCAT	NA	False	NA	NA	False	AATAAA	-25	NA	105734868	105532779	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072599	chr2	+	598	5	NIC	ENSMUSG00000042670.6	novel	955	7	NA	NA	0	-134	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	181.801230743909	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATGTTTTAAATATAAGA	NA	False	NA	20	True	AATAAA	-21	NA	105734982	105795769	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_105735076_105738668_105738775_105767336_105767464_105794524_105794636_105795608
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072603	chr2	+	760	7	NNC	ENSMUSG00000042670.6	novel	955	7	NA	NA	2	-134	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	164.760853630008	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATGTTTTAAATATAAGA	NA	False	NA	20	True	AATAAA	-21	NA	105734984	105795769	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_105735076_105738668_105738775_105761063_105761198_105763609_105763699_105767336_105767464_105794583_105794636_105795608
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072653	chr2	-	1969	4	NIC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	0	10	intron_retention	FALSE	canonical	3	182	junction_3	33.9247533357118	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAATTTTCTTGTCCATT	NA	False	NA	NA	False	AATAAA	-23	NA	106804742	106794763	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_106795992_106797444_106797573_106799416_106799904_106804616
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072674	chr2	+	1576	6	NNC	ENSMUSG00000027115.15	novel	3369	17	NA	NA	20311	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	149.324612840616	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTTTCCTGTTTTAT	NA	False	NA	27	True	ATTAAA	-18	NA	109142678	109172094	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_109142797_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072690	chr2	+	2629	1	ISM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	7522	0	7505	0	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGGGGTAATGTGGTTG	NA	False	NA	31	True	AGTAAA	-21	NA	109728719	109731348	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_109728700_109731300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072694	chr2	-	198	1	Intergenic	novelGene_243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTGTATTTATCTACA	NA	False	NA	NA	False	NA	NA	NA	109731940	109731742	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_-_109731700_109731900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072728	chr2	+	468	2	NNC	ENSMUSG00000027133.4	novel	1109	2	NA	NA	41	-603	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCATTTTGTGTGTTGTTG	NA	False	NA	24	True	ATTAAA	-18	NA	112092311	112093011	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_112092423_112092654
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072772	chr2	+	939	5	NNC	ENSMUSG00000055943.6	novel	5826	5	NA	NA	1	-4720	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	200.477398975545	140	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTATCTTCTGTTTTTCTT	361	False	NA	9	True	ATTAAA	-22	NA	112285342	112297787	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_112285485_112289809_112289925_112293145_112293285_112295081_112295163_112297325
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072777	chr2	+	918	5	NNC	ENSMUSG00000055943.6	novel	5826	5	NA	NA	27	-4720	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_1	188.575415948103	107	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTATCTTCTGTTTTTCTT	387	False	NA	9	True	ATTAAA	-22	NA	112285368	112297787	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_112285485_112289804_112289925_112293145_112293285_112295081_112295163_112297325
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072785	chr2	+	1065	5	NNC	ENSMUSG00000055943.6	novel	5826	5	NA	NA	36	-4720	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	221.363953705205	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTATCTTCTGTTTTTCTT	396	False	NA	9	True	ATTAAA	-22	NA	112285377	112297787	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_112285646_112289809_112289925_112293145_112293285_112295081_112295163_112297325
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072806	chr2	-	1360	1	Genic_Genomic	ENSMUSG00000041219.15	novel	NA	NA	NA	NA	15450	4	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGCGTGTTGTATTTT	NA	False	NA	0	True	ATTAAA	-21	NA	113663192	113661832	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_-_113661800_113663200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072810	chr2	-	930	1	FSM	ENSMUSG00000096006.2	ENSMUST00000178049.2	1316	1	-1	387	-1	-387	mono-exon	FALSE	NA	NA	NA	NA	NA	657	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTCTTTTTTTGTATAG	7159	False	NA	NA	False	AAGAAA	-45	NA	113751487	113750557	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_113750600_113751500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072819	chr2	-	1381	2	FSM	ENSMUSG00000040321.4	ENSMUST00000050668.4	4300	2	21	2898	-8	2201	multi-exon	FALSE	canonical	3	9	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCTTTGCCATTTTCT	NA	False	NA	NA	False	AAAAAG	-11	NA	114031929	114026839	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_114028109_114031817
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072847	chr2	+	448	4	ISM	ENSMUSG00000027349.6	ENSMUST00000028825.5	1861	8	-9	11308	-9	-9	5prime_fragment	FALSE	canonical	2	2	junction_2	0.471404520791032	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTCAGTTAGATAAAAATA	NA	False	NA	NA	False	CATAAA	-3	NA	117080210	117090713	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_117080320_117088114_117088261_117089701_117089837_117090655
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072860	chr2	+	654	5	ISM	ENSMUSG00000005102.14	ENSMUST00000110877.8	2134	11	11	17270	11	-17270	5prime_fragment	FALSE	canonical	3	82	junction_2	10.4013220313574	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGAAATGGCTAAGCAG	NA	False	NA	41	True	NA	NA	NA	118219109	118241424	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072872	chr2	-	750	4	NNC	ENSMUSG00000009549.15	novel	798	5	NA	NA	-23	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	698.728845833632	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTTTGTTTTTCTTGGT	NA	False	NA	0	True	ATTAAA	-18	NA	118310152	118306328	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_118306789_118309378_118309515_118309858_118309932_118310071
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072919	chr2	+	1115	10	NNC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-34	313	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	89.5624480391499	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCCTGAGATCATAGAAC	NA	False	NA	NA	False	NA	NA	NA	118692474	118707760	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706878_118707368_118707451_118707622
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072920	chr2	+	1966	11	NIC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-34	340	combination_of_known_splicesites	FALSE	canonical	3	32	junction_9	56.9639359595174	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCGCCCAAAGCCGTGT	NA	False	NA	48	True	ATTAAA	-20	NA	118692474	118711836	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708355_118708429_118710933
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072930	chr2	+	590	1	FSM	ENSMUSG00000074916.6	ENSMUST00000099546.6	2090	1	1500	0	1482	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCAACTCTGTAATTCCC	NA	False	NA	8	True	AATAAA	-19	NA	118758476	118759066	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_118758500_118759100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072950	chr2	+	584	1	ISM	ENSMUSG00000027324.2	ENSMUST00000028796.2	2706	3	3797	599	3797	-599	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGCTTTTTTTTTTTT	7052	False	NA	3	True	NA	NA	NA	118869067	118869651	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_118869100_118869700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072956	chr2	+	533	8	FSM	ENSMUSG00000027326.14	ENSMUST00000152380.8	1573	8	28	1012	0	-1012	multi-exon	FALSE	canonical	3	17	junction_1	17.907927784951	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAATTCTACAAAAATAG	7239	False	NA	NA	False	NA	NA	NA	118877627	118898740	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_118877705_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072967	chr2	+	895	5	ISM	ENSMUSG00000027323.11	ENSMUST00000110828.2	2849	7	1	9486	1	267	5prime_fragment	FALSE	canonical	3	719	junction_4	88.7901317714981	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTACTTTATGTGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	118943295	118954594	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072977	chr2	+	662	1	ISM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	22605	1217	1250	865	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGGAAGAAAGCTCAAAAG	NA	False	NA	10	True	ATTAAA	-17	NA	118965892	118966554	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_118965900_118966600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000072996	chr2	-	1239	12	NNC	ENSMUSG00000034278.4	novel	1008	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	116.975733868395	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTACTTTTCTTCCTCTTG	NA	False	NA	-4	True	AATAAA	-15	NA	119039276	119002980	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_119003167_119005391_119005623_119009832_119009944_119010365_119010447_119010967_119011046_119011406_119011451_119014079_119014177_119014397_119014484_119016176_119016265_119016509_119016569_119016826_119016897_119039168
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073005	chr2	+	1245	2	Genic_Genomic	ENSMUSG00000081572.4_ENSMUSG00000084015.2	novel	745	1	NA	NA	-23	74	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAACAATGTCTAAGGAT	9834	False	NA	NA	False	AATAAA	-29	NA	119017974	119115587	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_119018825_119115192
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073007	chr2	+	1653	11	NNC	ENSMUSG00000068580.12	novel	2008	11	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.466752224391	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGATGTTTTTTCTGTC	270	False	NA	8	True	NA	NA	NA	119039473	119047530	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_119039669_119040962_119041085_119041261_119041313_119041661_119041781_119041878_119042025_119042386_119042496_119045314_119045522_119045934_119046009_119046689_119046789_119046912_119047023_119047109
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073022	chr2	+	2226	11	FSM	ENSMUSG00000027315.14	ENSMUST00000028783.14	2273	11	47	0	47	0	multi-exon	TRUE	canonical	3	163	junction_1	46.3102580429002	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTTTGTTGAGCTC	NA	False	NA	13	True	AATAAA	-1	NA	119067889	119079995	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_119067954_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073035	chr2	+	1609	3	FSM	ENSMUSG00000027313.4	ENSMUST00000028780.4	1637	3	-27	55	-27	-55	multi-exon	FALSE	canonical	3	568	junction_2	33	460	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTGTCTCTGTACAG	7125	False	NA	26	True	CATAAA	-26	NA	119181682	119184807	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_119182118_119182837_119182874_119183669
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073051	chr2	+	2599	7	FSM	ENSMUSG00000014077.14	ENSMUST00000014221.13	2609	7	10	0	10	0	multi-exon	FALSE	canonical	3	147	junction_2	25.1197133741609	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGAGTTTTACCCGG	NA	False	NA	NA	False	AATAAA	-25	NA	119378187	119417508	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_119378399_119391211_119391285_119397130_119397212_119402248_119402377_119411175_119411238_119415010_119415134_119415587
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073066	chr2	+	446	3	NNC	ENSMUSG00000085438.2	novel	1381	3	NA	NA	26	-817	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	212	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGTGGGTGACTTCAG	NA	False	NA	NA	False	TTTAAA	-29	NA	119424809	119430410	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_119424916_119426739_119426824_119430154
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073075	chr2	-	1470	5	NIC	ENSMUSG00000072980.4	novel	1082	6	NA	NA	-36	16	combination_of_known_splicesites	FALSE	canonical	3	58	junction_3	272.52247613729	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTATCTTTTGCTGGT	7444	False	NA	NA	False	NA	NA	NA	119448986	119439976	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_119440846_119442232_119442337_119443492_119443575_119448334_119448402_119448638
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073097	chr2	-	1492	5	FSM	ENSMUSG00000027305.10	ENSMUST00000110801.8	1478	5	-13	-1	-6	1	multi-exon	FALSE	canonical	3	141	junction_4	75.083287088406	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCAGCCTTTTTCTGCTGT	NA	False	NA	0	True	AATAAA	-22	NA	119493314	119485925	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493089
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073107	chr2	-	1329	5	NIC	ENSMUSG00000027305.10	novel	1308	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_4	132.411055052061	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCAGCCTTTTTCTGCTG	NA	False	NA	-1	True	AATAAA	-21	NA	119493302	119485926	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493239
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073109	chr2	-	1384	5	NNC	ENSMUSG00000027305.10	novel	1478	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	127.660683062562	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCAGCCTTTTTCTGCTG	NA	False	NA	-1	True	AATAAA	-21	NA	119493309	119485926	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493191
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073134	chr2	+	702	1	NIC	ENSMUSG00000027296.8	novel	1818	7	NA	NA	8225	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGCCTCCTCCCCTTCA	NA	False	NA	23	True	AATAAA	-24	NA	119581042	119581744	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_119581000_119581700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073147	chr2	+	1256	1	ISM	ENSMUSG00000027298.18	ENSMUST00000110783.8	4460	20	19116	0	6003	0	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTTTTGTTTTTTACT	NA	False	NA	NA	False	AATAAA	-22	NA	119647329	119648585	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_119647300_119648600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073152	chr2	-	193	1	Intergenic	novelGene_244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGGCGCAGGGGTGGGG	NA	False	NA	NA	False	NA	NA	NA	119681186	119680993	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_-_119681000_119681200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073172	chr2	+	1279	8	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	46.6533022651655	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857972	119863075	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_119858058_119860623_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862055_119862133_119862321_119862482_119862594
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073185	chr2	+	369	1	ISM	ENSMUSG00000098789.8	ENSMUST00000044675.5	1373	8	4743	0	4632	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119862706	119863075	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_119862700_119863100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073190	chr2	-	831	1	ISM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	64289	312	39408	-312	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCGTGAGTCTGTCTCT	NA	False	NA	-9	True	AATATA	-13	NA	119920798	119919967	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_119920000_119920800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073199	chr2	-	1425	5	NIC	ENSMUSG00000046971.8	novel	3116	20	NA	NA	8933	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	4.76313972081441	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCACTGAGCCTGT	3681	False	NA	NA	False	AATAAA	-22	NA	120133925	120130446	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_120131110_120131377_120131565_120132677_120132845_120133207_120133424_120133733
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073200	chr2	-	1533	6	ISM	ENSMUSG00000046971.8	ENSMUST00000054651.8	3116	20	10721	0	8933	0	3prime_fragment	FALSE	canonical	2	5	junction_5	3.9293765408777	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCACTGAGCCTGT	3681	False	NA	NA	False	AATAAA	-22	NA	120133925	120130446	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_120131110_120131377_120131565_120132677_120132845_120133207_120133424_120133547_120133656_120133733
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073209	chr2	-	660	1	ISM	ENSMUSG00000033808.17	ENSMUST00000090042.12	2874	20	48098	0	48098	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120186452	120185792	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_120185800_120186500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073219	chr2	+	472	2	ISM	ENSMUSG00000079110.13	ENSMUST00000141181.9	1367	9	2893	-1	2819	0	3prime_fragment	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATTCTCCTTATTAGCA	NA	False	NA	NA	False	AATAAA	-21	NA	120334602	120335392	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_120334636_120334953
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073309	chr2	+	1956	13	FSM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	114	700	6	-700	multi-exon	FALSE	canonical	3	3731	junction_4	277.160252481404	1046	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTTCCCCTCATGGGA	NA	False	NA	12	True	AATAAA	-21	NA	121244369	121268468	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073357	chr2	+	518	3	NNC	ENSMUSG00000074884.13	novel	3056	3	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3687.5	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCTGGTTTGACTGGGGA	NA	False	NA	5	True	ATTAAA	-22	NA	121279848	121281543	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_121279927_121280466_121280565_121281201
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073376	chr2	+	1088	1	NIC	ENSMUSG00000074884.13	novel	3056	3	NA	NA	563	8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCTGGTTTGACTGGGGA	NA	False	NA	5	True	ATTAAA	-22	NA	121280455	121281543	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_121280500_121281500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073384	chr2	+	613	4	NNC	ENSMUSG00000027245.12	novel	961	4	NA	NA	-41	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2132.43397709441	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTTATATTGTGTGTGT	NA	False	NA	16	True	TATAAA	-24	NA	121287563	121288921	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_121287773_121288126_121288183_121288472_121288529_121288629
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073449	chr2	+	768	5	ISM	ENSMUSG00000027242.15	ENSMUST00000110603.2	2341	13	-15	17429	-15	-7209	5prime_fragment	FALSE	canonical	3	27	junction_1	11.2998893799895	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTAAGAAGAAATACAAATG	NA	False	NA	NA	False	NA	NA	NA	121340313	121356061	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_121340417_121341019_121341407_121348185_121348279_121349898_121349955_121355932
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073455	chr2	-	541	6	NNC	ENSMUSG00000027238.18	novel	3354	13	NA	NA	-5332	-3876	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	10.2097992144802	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTTGTTTCTTTTTCAT	NA	False	NA	NA	False	TATAAA	-29	NA	121422246	121403303	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_121403393_121404025_121404150_121406802_121406901_121416386_121416466_121416909_121416953_121422138
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073457	chr2	+	705	2	NNC	ENSMUSG00000060227.16	novel	3475	8	NA	NA	35212	4929	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGTAAAATAAAGATAGATT	NA	False	NA	NA	False	NA	NA	NA	121764499	121771630	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_121765019_121771444
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073467	chr2	+	1962	1	ISM	ENSMUSG00000033411.17	ENSMUST00000036647.13	5053	13	54653	1027	31842	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGCTCTTTCTCAAAAT	NA	False	NA	11	True	AATAAA	-21	NA	121841134	121843096	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_121841100_121843100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073484	chr2	+	899	1	Intergenic	novelGene_245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGCGTGTTTGTCTGTC	NA	False	NA	NA	False	NA	NA	NA	121897417	121898316	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_+_121897400_121898300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073512	chr2	+	1928	4	NIC	ENSMUSG00000027229.6	novel	448	5	NA	NA	100	4	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	28.5228952870419	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCTCAAAGTGATTATA	2045	False	NA	NA	False	AATAAA	-19	NA	122016852	122036882	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_122017027_122023712_122023787_122028866_122028956_122035291
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073521	chr2	-	554	2	Antisense	novelGene_ENSMUSG00000070692.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTCTCTACTACCCC	NA	False	NA	NA	False	NA	NA	NA	122050899	122041955	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr2_-_122041976_122050365
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073526	chr2	+	511	1	FSM	ENSMUSG00000070692.7	ENSMUST00000117447.2	399	1	-84	-28	-84	28	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCACAGACATGGCTACA	NA	False	NA	7	True	AATAAA	-28	NA	122050389	122050900	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_122050400_122050900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073569	chr2	+	1458	8	NIC	ENSMUSG00000035183.15	novel	1954	9	NA	NA	0	-289	combination_of_known_splicesites	FALSE	canonical	3	4	junction_6	24.7608974154074	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTAACACTTAATTACT	NA	False	NA	5	True	AATAAA	-18	NA	124910043	124930308	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_124910222_124910691_124910872_124922540_124922625_124922713_124922818_124923146_124923248_124924950_124925235_124929339_124929442_124929883
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073570	chr2	+	1673	9	FSM	ENSMUSG00000035183.15	ENSMUST00000070353.4	1954	9	0	281	0	-281	multi-exon	TRUE	canonical	2	7	junction_6	24.0624188310319	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTAATTACTATTCTTTA	NA	False	NA	13	True	AATAAA	-26	NA	124910043	124930316	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_124910222_124910691_124910872_124922540_124922625_124922713_124922818_124923146_124923248_124924950_124925235_124927576_124927784_124929339_124929442_124929883
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073576	chr2	-	1223	1	ISM	ENSMUSG00000027201.17	ENSMUST00000129945.2	3424	2	48	3113	48	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	-8	True	NA	NA	NA	124930883	124929660	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_124929700_124930900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073610	chr2	+	747	5	NIC	ENSMUSG00000027203.16	novel	1950	6	NA	NA	-183	-16	combination_of_known_splicesites	TRUE	canonical	2	25	junction_1	1008.28998185046	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGATTTTACATAAACTGA	NA	False	NA	16	True	AATAAA	-17	NA	125089636	125099652	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_125089817_125092892_125092938_125098768_125098844_125098989_125099061_125099276
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073613	chr2	+	833	5	NNC	ENSMUSG00000027203.16	novel	1950	6	NA	NA	-183	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1046.70566540934	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGATTTTACATAAACTGA	NA	False	NA	16	True	AATAAA	-17	NA	125089636	125099652	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_125089817_125091085_125091178_125098729_125098844_125098989_125099061_125099276
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073632	chr2	-	1984	1	Genic_Genomic	ENSMUSG00000027206.14	novel	NA	NA	NA	NA	26711	2	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGTGTGCATGTGATA	NA	False	NA	-2	True	AATAAA	-24	NA	125674205	125672221	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_-_125672200_125674200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073646	chr2	+	1794	10	FSM	ENSMUSG00000027207.16	ENSMUST00000094604.9	1928	10	134	0	-2	0	multi-exon	FALSE	canonical	3	86	junction_4	15.4040238449986	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTTGCTCTTGAATG	NA	False	NA	8	True	ATTAAA	-15	NA	125708160	125825507	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_125708306_125720197_125720287_125729783_125729908_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179_125817382_125824974
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073663	chr2	+	253	1	ISM	ENSMUSG00000023330.13	ENSMUST00000110437.4	1276	4	10484	2	10484	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCGCCCTTACCTTTCGA	NA	False	NA	26	True	ATTAAA	-24	NA	126006944	126007197	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_126006900_126007200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073676	chr2	-	273	1	NIC	ENSMUSG00000027361.16	novel	4153	9	NA	NA	24007	10	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGCAGAATTTGTTTGT	8832	False	NA	-7	True	NA	NA	NA	126481203	126480930	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_126480900_126481200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073691	chr2	-	239	1	Intergenic	novelGene_246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAACTTTAGTTTAAAAT	NA	False	NA	NA	False	TTTAAA	-2	NA	126521094	126520855	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_-_126520900_126521100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073696	chr2	-	418	1	FSM	ENSMUSG00000074846.4	ENSMUST00000188689.2	204	1	-10	-204	-10	204	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGATGCTAAGTATATAAT	1779	False	NA	NA	False	AAGAAA	-3	NA	126551487	126551069	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_126551100_126551500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073709	chr2	-	2003	6	ISM	ENSMUSG00000027365.15	ENSMUST00000155675.8	1123	9	4801	-1262	5	0	3prime_fragment	FALSE	canonical	3	330	junction_1	18.5299757150408	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTAATGAGTTTACTC	NA	False	NA	-16	True	ATTAAA	-35	NA	126639744	126633484	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073765	chr2	+	2201	5	ISM	ENSMUSG00000027367.17	ENSMUST00000125049.2	2869	7	20075	-3	704	3	3prime_fragment	FALSE	canonical	3	326	junction_2	27.9732014613987	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGTGTTCATTTCTGGC	NA	False	NA	12	True	AATAAA	-19	NA	127132698	127140855	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_127132803_127132877_127132961_127134070_127134171_127137403_127137489_127139026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073777	chr2	-	1222	8	NNC	ENSMUSG00000027371.11	novel	1211	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	35.5481851771332	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTAGCTTCCACTGTCTTT	NA	False	NA	-4	True	AATAAA	-19	NA	127286477	127278134	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_127278327_127278465_127278554_127278656_127278766_127280032_127280193_127280429_127280490_127282301_127282523_127283793_127284045_127286336
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073784	chr2	-	878	8	FSM	ENSMUSG00000079056.13	ENSMUST00000088538.6	1296	8	319	99	319	11	multi-exon	FALSE	canonical	3	65	junction_1	5.52175659716791	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTTTACTTCCAAGACAC	9947	False	NA	0	True	AATATA	-15	NA	127324100	127300148	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_127300309_127301249_127301313_127301902_127302008_127302352_127302461_127306967_127307039_127307268_127307339_127307773_127307899_127323924
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073788	chr2	+	1650	12	FSM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	-2	2833	-2	141	multi-exon	FALSE	canonical	3	1110	junction_4	149.07045314213	869	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCTGTGTGATGGGAAT	3965	False	NA	37	True	AATAAA	-34	NA	127429139	127445916	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073815	chr2	-	1110	1	ISM	ENSMUSG00000027375.15	ENSMUST00000028854.15	2778	4	22360	0	21884	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTCTCACTCTTTTGT	6304	False	NA	-2	True	ATTAAA	-17	NA	127476255	127475145	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_127475100_127476300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073824	chr2	-	233	1	ISM	ENSMUSG00000027377.3	ENSMUST00000028856.3	2006	4	25314	0	25314	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAGTCTATCGCTTTG	NA	False	NA	2	True	AATAAA	-21	NA	127546538	127546305	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_127546300_127546500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073859	chr2	+	420	1	Genic_Genomic	ENSMUSG00000014361.6	novel	NA	NA	NA	NA	31279	117	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGGTTTGCCTTCATTT	NA	False	NA	NA	False	ATTAAA	-25	NA	128644511	128644931	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_128644500_128644900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073876	chr2	+	812	1	Genic_Genomic	ENSMUSG00000027395.16	novel	NA	NA	NA	NA	4073	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGATTTTTATTTTT	290	False	NA	16	True	AATAAA	-17	NA	128967703	128968515	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_128967700_128968500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073883	chr2	+	562	4	NNC	ENSMUSG00000037938.5	novel	1325	4	NA	NA	-20	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	300.274319026231	37	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGCCTTCAGTATTGAA	3909	False	NA	21	True	AATAAA	-25	NA	128971703	128975381	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_128971778_128972097_128972239_128972320_128972487_128975200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073928	chr2	-	306	1	NIC	ENSMUSG00000027404.17	novel	1161	7	NA	NA	7190	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGATATATTCATTTGTCT	NA	False	NA	-16	True	AATAAA	-23	NA	130013865	130013559	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_130013600_130013900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073969	chr2	+	1975	13	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	83	junction_12	803.725630354594	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120452_130120816
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073970	chr2	+	2014	13	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	170	junction_12	786.810487382798	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120491_130120816
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073990	chr2	+	725	1	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	878	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130120508	130121233	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_130120500_130121200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073993	chr2	-	408	1	ISM	ENSMUSG00000027406.14	ENSMUST00000028892.11	1616	12	4831	0	835	0	mono-exon	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTGTGTTTTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	130121636	130121228	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_130121200_130121600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073996	chr2	-	1513	12	NNC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	-6	0	intron_retention	FALSE	canonical	2	3	junction_8	236.860317312452	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTGTGTTTTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	130126360	130121228	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125624_130125750_130125857_130125957_130126090_130126169_130126301
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000073998	chr2	-	1530	12	FSM	ENSMUSG00000027406.14	ENSMUST00000028892.11	1616	12	86	0	0	0	multi-exon	FALSE	canonical	3	745	junction_6	49.1089192551946	1214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTGTGTTTTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	130126381	130121228	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074117	chr2	-	1325	6	FSM	ENSMUSG00000027327.17	ENSMUST00000103188.10	1241	6	-69	-15	-8	14	multi-exon	FALSE	canonical	3	656	junction_1	33.1336686770421	1284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGGGTTTTTTGTTCTCT	NA	False	NA	0	True	AATAAA	-29	NA	131002009	130988229	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_130988896_130989080_130989204_130990075_130990215_130993537_130993681_130995513_130995631_131001872
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074157	chr2	+	598	1	ISM	ENSMUSG00000068264.12	ENSMUST00000089506.12	1432	4	2477	0	2313	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTCTTTTTGTGCG	NA	False	NA	11	True	ATTAAA	-17	NA	131054836	131055434	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_131054800_131055400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074165	chr2	+	692	4	ISM	ENSMUSG00000037514.19	ENSMUST00000138509.8	1791	9	19908	-1	8562	1	3prime_fragment	FALSE	canonical	3	415	junction_2	62.3110477095889	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGAGGTCATCTTTC	NA	False	NA	14	True	NA	NA	NA	131124666	131138612	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_131124689_131129393_131129518_131135318_131135445_131138192
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074170	chr2	+	1118	1	ISM	ENSMUSG00000037514.19	ENSMUST00000150843.9	4266	7	35571	0	23886	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGCTTGCATGTA	NA	False	NA	5	True	AATAAA	-19	NA	131139990	131141108	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_131140000_131141100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074174	chr2	-	435	1	FSM	ENSMUSG00000082044.2	ENSMUST00000121967.2	279	1	-5	-151	-5	151	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAACATACCTAGAAA	NA	False	NA	NA	False	AATAAA	-31	NA	131164291	131163856	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_131163900_131164300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074210	chr2	-	1588	4	NNC	ENSMUSG00000027341.11	novel	1612	4	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	266.939860060068	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGTTGTTATTGAT	4895	False	NA	-2	True	TATAAA	-20	NA	132089702	132081411	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_132082547_132085938_132086062_132087875_132087990_132089486
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074265	chr2	-	529	2	FSM	ENSMUSG00000027342.15	ENSMUST00000135181.2	824	2	-213	508	134	-408	multi-exon	FALSE	canonical	3	2527	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTAACAATATTGTAAAAT	8359	False	NA	NA	False	NA	NA	NA	132095100	132093756	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_132093921_132094735
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074286	chr2	+	339	1	ISM	ENSMUSG00000058793.15	ENSMUST00000110158.8	1247	4	32707	0	-5441	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTCTGAGCCCTTTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	132137774	132138113	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_132137800_132138100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074292	chr2	-	1736	2	ISM	ENSMUSG00000027346.16	ENSMUST00000127712.8	4356	7	7882	1	3978	0	3prime_fragment	FALSE	canonical	3	94	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCTTCCTGATTTGT	9372	False	NA	-1	True	NA	NA	NA	132376069	132371002	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_132372663_132375993
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074302	chr2	+	1174	3	NNC	ENSMUSG00000044991.11	novel	1076	3	NA	NA	1666	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTTGACTCAGTCTATT	NA	False	NA	25	True	NA	NA	NA	132533868	132592973	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_132534052_132572619_132572770_132592132
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074351	chr2	+	561	6	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	272.795454507585	507	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGCCCAAAATCATTGT	NA	False	NA	30	True	AATAAA	-40	NA	135488442	135493988	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135492537_135492672_135493417_135493482_135493766
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074352	chr2	+	311	3	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488442	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488469_135493417_135493482_135493766
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074353	chr2	+	529	5	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	292.377645349298	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488442	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135492537_135492672_135493733
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074357	chr2	+	585	7	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	268.921301994964	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488442	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135492147_135492173_135492537_135492672_135493417_135493482_135493766
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074358	chr2	+	421	5	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	233.195733237124	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488442	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488469_135490846_135490887_135491052_135491123_135493417_135493482_135493766
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074360	chr2	+	711	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	intron_retention	FALSE	canonical	3	453	junction_1	106.871677986057	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488442	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135493417
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074362	chr2	+	579	6	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	263.222035551737	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488442	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488469_135490827_135490892_135491052_135491123_135492537_135492672_135493417_135493482_135493766
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074363	chr2	+	495	5	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	295.052008127381	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488442	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488469_135488964_135489065_135490846_135490892_135491052_135491123_135493733
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074365	chr2	+	490	5	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	185.85663157391	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488442	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488469_135490846_135490892_135492537_135492672_135493417_135493482_135493766
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074367	chr2	+	414	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	319.15617911403	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488442	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488469_135490827_135490892_135491052_135491123_135493733
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074369	chr2	+	672	6	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	287.805906819162	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488442	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135491580_135491827_135493417_135493482_135493766
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074370	chr2	+	380	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	286.975415129744	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488442	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135493748
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074371	chr2	+	360	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	213.310936324314	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488442	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488469_135490846_135490896_135493417_135493482_135493766
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074372	chr2	+	641	3	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	intron_retention	FALSE	canonical	3	137	junction_2	158	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488442	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488469_135490846_135490892_135493417
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074373	chr2	+	526	6	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	289.531621761769	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488442	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488469_135488964_135489065_135490846_135490892_135491052_135491123_135493417_135493482_135493766
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074374	chr2	+	550	6	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	272.981024981591	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488442	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135492537_135492672_135493417_135493482_135493776
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074383	chr2	+	422	5	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	252.149137416728	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAAAATCATTGTCTTGC	NA	False	NA	35	True	AATAAA	-45	NA	135488442	135493993	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135493417_135493482_135493776
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074386	chr2	+	346	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	189.688048003968	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488442	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488469_135490846_135490892_135493417_135493482_135493776
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074387	chr2	+	445	5	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	294.88217986172	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488442	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488469_135490827_135490892_135491052_135491123_135493417_135493482_135493766
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074423	chr2	+	500	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	58.1969835033474	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488442	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488613_135490846_135490892_135493417_135493482_135493766
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074424	chr2	+	570	5	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	294.653504136638	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488442	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488613_135490846_135490892_135491052_135491123_135493417_135493482_135493766
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074425	chr2	+	704	6	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	263.117160215749	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488442	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488613_135490846_135490892_135491052_135491123_135492537_135492672_135493417_135493482_135493766
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074427	chr2	+	469	3	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488442	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488613_135490846_135490892_135493733
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074438	chr2	+	434	5	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	295.136726789466	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488443	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488469_135490827_135490892_135491052_135491123_135493417_135493482_135493776
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074444	chr2	+	588	6	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	288.598406094005	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488443	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135491663_135491827_135493417_135493482_135493766
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074451	chr2	+	389	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	213.546247918337	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488443	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488469_135490846_135490887_135491052_135491123_135493733
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074475	chr2	+	538	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	318.937123723296	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488443	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135488613_135490846_135490892_135491052_135491123_135493733
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074498	chr2	-	294	2	Antisense	novelGene_ENSMUSG00000084762.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAACACCCGTTCATCTT	NA	False	NA	NA	False	NA	NA	NA	135493987	135490844	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr2_-_135490907_135493755
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074505	chr2	+	246	2	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	2590	4	at_least_one_novel_splicesite	FALSE	canonical	3	337	junction_1	0	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135493416	135493987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_135493442_135493766
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074527	chr2	-	577	3	NNC	ENSMUSG00000115423.3	novel	944	3	NA	NA	222	-137	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	161.5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCTATGCTGGTTATTG	NA	False	NA	-16	True	AATAAA	-27	NA	136733087	136723327	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_136723560_136727392_136727621_136732970
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074544	chr2	-	658	5	ISM	ENSMUSG00000039033.12	ENSMUST00000099304.4	2127	13	-2	175066	-2	-32014	5prime_fragment	FALSE	canonical	3	59	junction_4	19.0705925445435	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGGATATAAGTTATTAA	NA	False	NA	NA	False	AATAAA	-16	NA	139908707	139850465	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074564	chr2	+	1067	11	NNC	ENSMUSG00000027384.7	novel	1166	11	NA	NA	28	8	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_6	69.9549140518377	25	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCCCAGAATTTTCATC	NA	False	NA	19	True	AATAAA	-19	NA	140012596	140045560	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_140012854_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030656_140030833_140035502_140035564_140044785_140044870_140045207_140045291_140045451
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074607	chr2	+	1136	7	NNC	ENSMUSG00000008333.13	novel	636	5	NA	NA	-26	-1106	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	366.493140757398	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGTTTATTGTCCTATC	2054	False	NA	20	True	AATAAA	-20	NA	142905024	142913667	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_142905266_142906461_142906551_142907095_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074624	chr2	+	1675	4	NNC	ENSMUSG00000015932.9	novel	1911	4	NA	NA	229	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	684.4683257017	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTCTTTGTGTGGTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	143757468	143785244	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_143757568_143780311_143780613_143781871_143781949_143784046
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074625	chr2	+	1674	4	NNC	ENSMUSG00000015932.9	novel	1911	4	NA	NA	229	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	754.542392594493	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTCTTTGTGTGGTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	143757468	143785244	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_143757568_143780304_143780613_143781879_143781949_143784046
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074630	chr2	+	1699	4	NNC	ENSMUSG00000015932.9	novel	1911	4	NA	NA	12235	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	682.117780641046	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTCTTTGTGTGGTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	143769474	143785244	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_143769591_143780304_143780613_143781871_143781949_143784046
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074634	chr2	+	1201	1	Genic_Genomic	ENSMUSG00000015932.9	novel	NA	NA	NA	NA	26805	1	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCTTTGTGTGGTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	143784044	143785245	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_143784000_143785200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074644	chr2	-	1455	2	Genic_Genomic	ENSMUSG00000082480.2_ENSMUSG00000082436.2	novel	886	1	NA	NA	0	39	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATATATATATATATAAAG	NA	False	NA	NA	False	AATAAA	-16	NA	144103461	143984368	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_-_143985389_144103026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074674	chr2	+	759	2	ISM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	114	8613	73	-7902	5prime_fragment	FALSE	canonical	3	360	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTAATCTTCGTAGAT	NA	False	NA	NA	False	NA	NA	NA	144112933	144114534	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_144112993_144113834
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074690	chr2	+	726	1	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-572	563	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTATTATTATTAGTCTA	NA	False	NA	22	True	AATAAA	-23	NA	144215150	144215876	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_144215200_144215900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074697	chr2	-	683	1	ISM	ENSMUSG00000027428.10	ENSMUST00000028915.6	2170	5	7922	0	7843	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGACTGCTGTGGTGC	NA	False	NA	-9	True	AATAAA	-20	NA	144384867	144384184	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_144384200_144384900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074727	chr2	+	321	1	NIC	ENSMUSG00000074754.5	novel	471	2	NA	NA	992	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCAGTGTCTTCTTGAAG	NA	False	NA	NA	False	NA	NA	NA	144436965	144437286	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_144437000_144437300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074743	chr2	+	347	1	ISM	ENSMUSG00000027430.13	ENSMUST00000028917.7	1350	6	168496	19	29979	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTGTGTCTGTTTAAT	NA	False	NA	NA	False	AATAAA	-42	NA	144610312	144610659	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_144610300_144610700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074777	chr2	+	1044	6	NNC	ENSMUSG00000002728.15	novel	1172	6	NA	NA	0	-107	at_least_one_novel_splicesite	FALSE	canonical	3	102	junction_3	515.953873907348	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGGAAGTTTGTTG	NA	False	NA	-43	True	AGTAAA	-18	NA	145745176	145758238	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_145745283_145750510_145750536_145753592_145753714_145754312_145754449_145757458_145757600_145757723
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074782	chr2	+	1034	5	NNC	ENSMUSG00000002728.15	novel	1172	6	NA	NA	0	-107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	611.044597390403	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGGAAGTTTGTTG	NA	False	NA	-43	True	AGTAAA	-18	NA	145745176	145758238	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_145745287_145753586_145753714_145754312_145754449_145757453_145757600_145757723
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074814	chr2	+	523	1	Genic_Genomic	ENSMUSG00000027433.6	novel	NA	NA	NA	NA	16040	2	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTCTGGTGTCTGATT	NA	False	NA	12	True	AATAAA	-24	NA	146919399	146919922	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_146919400_146919900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074824	chr2	+	751	1	Genic_Genomic	ENSMUSG00000036992.11	novel	NA	NA	NA	NA	2653	2	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTCTAAATCTTGAGAAG	NA	False	NA	17	True	AATAAA	-21	NA	148517198	148517949	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_148517200_148517900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074832	chr2	-	208	2	Intergenic	novelGene_247	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGGCGAAACCCCGTCC	NA	False	NA	NA	False	NA	NA	NA	148577756	148577461	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_-_148577523_148577609
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074836	chr2	-	858	3	FSM	ENSMUSG00000027447.7	ENSMUST00000028938.7	860	3	11	-9	11	9	multi-exon	FALSE	canonical	3	2071	junction_1	68	12495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTCTGTCTCAGGATA	NA	False	NA	3	True	ATTAAA	-29	NA	148717485	148713632	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_148713964_148714736_148714851_148717072
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074846	chr2	-	325	1	Genic_Genomic	ENSMUSG00000027447.7	novel	NA	NA	NA	NA	3407	2	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGAGTTGTTTCTGTCT	NA	False	NA	-4	True	ATTAAA	-22	NA	148713964	148713639	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_-_148713600_148714000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074848	chr2	-	735	3	NNC	ENSMUSG00000027447.7	novel	860	3	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1103.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGAGTTGTTTCTGT	NA	False	NA	-6	True	ATTAAA	-20	NA	148717388	148713641	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_148713943_148714732_148714851_148717072
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074881	chr2	-	691	1	Intergenic	novelGene_248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGCAGGCAACAGAGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	150096310	150095619	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_-_150095600_150096300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074886	chr2	+	667	5	NNC	ENSMUSG00000079008.3	novel	3018	4	NA	NA	-9	23746	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	20.216020874544	30	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGACTATTCAGCTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	150099427	150135966	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_150099549_150108044_150108172_150108370_150108432_150135188_150135267_150135686
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074932	chr2	-	1113	1	Genic_Genomic	ENSMUSG00000033096.8	novel	NA	NA	NA	NA	16063	1	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCTGATTATTACTC	NA	False	NA	NA	False	AATAAA	-16	NA	150426111	150424998	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_-_150425000_150426100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074939	chr2	-	374	1	ISM	ENSMUSG00000027452.12	ENSMUST00000028944.4	3618	14	49780	0	19635	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGATGTTTTTGGTTGAC	NA	False	NA	-5	True	AATAAA	-27	NA	150460398	150460024	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_150460000_150460400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074950	chr2	+	150	1	ISM	ENSMUSG00000033059.8	ENSMUST00000045441.8	3909	20	44874	0	3221	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTATCTGCATTTCCA	6125	False	NA	23	True	ATTAAA	-23	NA	150673528	150673678	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_150673500_150673700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074956	chr2	+	1130	7	FSM	ENSMUSG00000027454.11	ENSMUST00000028948.5	1087	7	-37	-6	-37	6	multi-exon	FALSE	canonical	3	394	junction_1	28.3058690419888	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGGTAGCTTATCTTT	2385	False	NA	29	True	AATAAA	-36	NA	150751476	150773206	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_150751714_150754700_150754766_150758055_150758155_150759788_150759880_150767801_150767919_150769961_150770037_150772760
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074959	chr2	+	1114	7	NNC	ENSMUSG00000027454.11	novel	1087	7	NA	NA	-23	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	168.712197411911	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGGTAGCTTATCTTT	2399	False	NA	29	True	AATAAA	-36	NA	150751490	150773206	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_150751714_150754700_150754764_150758055_150758155_150759788_150759880_150767801_150767919_150769961_150770037_150772760
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000074973	chr2	-	1399	2	FSM	ENSMUSG00000053916.5	ENSMUST00000066640.5	1394	2	-5	0	-5	0	multi-exon	FALSE	canonical	3	184	junction_1	0	421	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTAGAGTGATCTTGT	NA	False	NA	-1	True	ATTAAA	-38	NA	150881323	150871604	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_150872837_150881156
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075011	chr2	+	681	5	NNC	ENSMUSG00000032966.15	novel	783	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	999.808606684299	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGGGTGAAGACTCAGT	NA	False	NA	9	True	CATAAA	-16	NA	151384506	151402748	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_151384665_151384737_151384786_151399305_151399410_151401377_151401541_151402540
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075026	chr2	+	1447	9	NNC	ENSMUSG00000027456.9	novel	1399	9	NA	NA	3567	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.0987313559674	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCGGTCATGAAAGTTCC	NA	False	NA	19	True	AATAAA	-19	NA	151418108	151431925	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_151418240_151424612_151424686_151425853_151425924_151426728_151426830_151428246_151428406_151428986_151429163_151429241_151429414_151431124_151431217_151431452
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075059	chr2	+	403	1	NIC	ENSMUSG00000068079.6	novel	980	2	NA	NA	5134	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGTATCCTGGCTAAG	NA	False	NA	NA	False	AATAAA	-17	NA	151990614	151991017	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_151990600_151991000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075067	chr2	-	465	1	FSM	ENSMUSG00000081087.2	ENSMUST00000117430.2	392	1	-29	-44	-29	44	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGGTCTTCTATGTGTC	NA	False	NA	NA	False	AATAAA	-27	NA	152027631	152027166	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_152027200_152027600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075095	chr2	-	2096	4	FSM	ENSMUSG00000032715.10	ENSMUST00000040312.7	2026	4	-66	-4	-66	4	multi-exon	FALSE	canonical	3	926	junction_3	7.71722460186015	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGACTTTCTCTTCTT	NA	False	NA	0	True	AATAAA	-33	NA	152186018	152179337	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_152180608_152181634_152181928_152184956_152185248_152185776
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075102	chr2	-	1896	4	NNC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	-5903	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	427.130737206615	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGGTGACTTTCTCT	NA	False	NA	-4	True	AATAAA	-29	NA	152191855	152179341	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_152180608_152181634_152181928_152184956_152185248_152191809
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075138	chr2	+	588	2	ISM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	30651	3618	8273	16	3prime_fragment	FALSE	canonical	3	175	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTAGTGTTTCGTG	NA	False	NA	37	True	NA	NA	NA	152542031	152546972	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_152542189_152546541
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075177	chr2	+	1002	1	Genic_Genomic	ENSMUSG00000027469.17	novel	NA	NA	NA	NA	12055	4	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	NA	False	NA	17	True	NA	NA	NA	152736243	152737245	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_152736200_152737200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075219	chr2	-	287	1	ISM	ENSMUSG00000056941.18	ENSMUST00000071852.10	3210	9	13669	1893	13619	8	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCTGAATCCACAAAATGT	NA	False	NA	-11	True	ATTAAA	-25	NA	153461032	153460745	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_153460700_153461000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075225	chr2	+	591	1	ISM	ENSMUSG00000027478.16	ENSMUST00000072997.10	4208	23	37690	0	17770	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGTGTGTTTTTTATC	1087	False	NA	26	True	ATTAAA	-18	NA	153529059	153529650	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_153529100_153529600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075237	chr2	+	1046	1	FSM	ENSMUSG00000083097.4	ENSMUST00000118786.2	435	1	-121	-490	-121	490	mono-exon	FALSE	NA	NA	NA	NA	NA	847	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATGACCAAGATAACTAT	NA	False	NA	NA	False	NA	NA	NA	153667969	153669015	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_153668000_153669000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075249	chr2	-	1989	14	FSM	ENSMUSG00000027487.12	ENSMUST00000028990.10	1970	14	-12	-7	0	1	multi-exon	FALSE	canonical	3	80	junction_3	9.02265393460642	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTACTTTTTTCAT	5668	False	NA	-8	True	AATAAA	-19	NA	154214651	154177298	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_154177538_154184220_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109_154195341_154196009_154196131_154202476_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555_154212876_154214600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075252	chr2	-	1970	14	NNC	ENSMUSG00000027487.12	novel	1970	14	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	25.6321266608872	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCCTTGTCTACTTTT	5680	False	NA	-13	True	AATAAA	-14	NA	154214639	154177303	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_154177538_154184220_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109_154195341_154196009_154196131_154202478_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555_154212876_154214600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075269	chr2	+	616	2	ISM	ENSMUSG00000038533.16	ENSMUST00000099178.10	3247	9	12	25539	1	-3903	5prime_fragment	FALSE	canonical	3	587	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTAGGGCAACCCCTTGG	5318	False	NA	NA	False	NA	NA	NA	154278415	154342794	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_154278557_154342319
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075273	chr2	+	1303	1	ISM	ENSMUSG00000038533.16	ENSMUST00000109725.8	6080	11	101573	0	7015	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGACCAGACCTGGGGAA	NA	False	NA	37	True	AATAAA	-27	NA	154379973	154381276	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_154380000_154381300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075337	chr2	-	2494	10	NNC	ENSMUSG00000074656.13	novel	2312	10	NA	NA	-20	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4169.46393510879	19885	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGCTCCATTGCTTTTG	3612	False	NA	-14	True	AATAAA	-26	NA	154734875	154713335	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_154714082_154714143_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075343	chr2	-	1546	9	NNC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	-43	-931	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4408.33670270035	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGGCTGTGGCAAGTT	3693	False	NA	63	True	AATAAA	-42	NA	154734794	154714268	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_154714821_154715464_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075388	chr2	+	273	1	ISM	ENSMUSG00000027598.17	ENSMUST00000029126.15	5159	25	93074	0	93022	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGCCTTTTCGTCTGCT	NA	False	NA	57	True	AATAAA	-17	NA	155068502	155068775	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_155068500_155068800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075424	chr2	+	360	1	NIC	ENSMUSG00000047459.15	novel	684	4	NA	NA	13106	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTGTCTTTACTAG	NA	False	NA	18	True	AGTAAA	-20	NA	155091836	155092196	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_155091800_155092200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075430	chr2	+	445	1	Genic_Genomic	ENSMUSG00000027602.10	novel	NA	NA	NA	NA	751	11	mono-exon	FALSE	NA	NA	NA	NA	NA	1156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTTTGGGAGCAGG	NA	False	NA	22	True	AATAAA	-34	NA	155119559	155120004	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_155119600_155120000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075439	chr2	-	577	5	NNC	ENSMUSG00000038383.17	novel	3057	4	NA	NA	16	-1894	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.2625394353564	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAATCTGTTTTCCTTCA	NA	False	NA	NA	False	AGTAAA	-18	NA	155199323	155176459	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_155176711_155177280_155177344_155178601_155178662_155187567_155187633_155199185
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075450	chr2	-	727	2	NNC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	8053	0	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_1	0	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCATTGTTTCATGTAC	8119	False	NA	-2	True	AATAAA	-19	NA	155406871	155405100	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_155405636_155406679
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075452	chr2	-	1887	13	NNC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	294.816173892968	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCATTGTTTCATGTAC	8430	False	NA	-2	True	AATAAA	-19	NA	155434650	155405100	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413434_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434613
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075460	chr2	-	542	1	NIC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	9282	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCATTGTTTCATGTAC	9348	False	NA	-2	True	AATAAA	-19	NA	155405642	155405100	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_155405100_155405600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075480	chr2	-	1291	6	NNC	ENSMUSG00000027613.16	novel	1500	6	NA	NA	51	1	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_2	648.318872160914	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTGTGTGTGTGTGTG	NA	False	NA	-2	True	ATTAAA	-23	NA	155668635	155661750	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_155662032_155664756_155664935_155665107_155665289_155665784_155665961_155668044_155668131_155668246
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075481	chr2	-	1351	6	FSM	ENSMUSG00000027613.16	ENSMUST00000029142.15	1500	6	150	-1	-9	1	multi-exon	FALSE	canonical	3	1052	junction_5	244.745255316625	3588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTGTGTGTGTGTGTG	NA	False	NA	-2	True	ATTAAA	-23	NA	155668695	155661750	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_155662032_155664756_155664939_155665111_155665289_155665784_155665961_155668044_155668131_155668246
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075495	chr2	-	972	6	NIC	ENSMUSG00000027613.16	novel	1500	6	NA	NA	47	2	combination_of_known_junctions	FALSE	canonical	3	53	junction_5	639.961123819252	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGTGCTGTGTGTGTG	NA	False	NA	-6	True	ATTAAA	-19	NA	155668639	155661754	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_155662032_155664756_155664939_155665111_155665289_155665784_155665961_155668044_155668131_155668565
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075506	chr2	-	280	1	NIC	ENSMUSG00000027613.16	novel	1500	6	NA	NA	2366	2	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGTGCTGTGTGTGTG	6411	False	NA	-6	True	ATTAAA	-19	NA	155662034	155661754	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_155661800_155662000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075517	chr2	-	1271	6	NNC	ENSMUSG00000027613.16	novel	1500	6	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	634.213024148827	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCAGTGTGCTGTGTGTG	NA	False	NA	-8	True	ATTAAA	-17	NA	155668619	155661756	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_155662032_155664756_155664939_155665111_155665289_155665784_155665954_155668035_155668131_155668246
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075559	chr2	+	1369	13	FSM	ENSMUSG00000005881.14	ENSMUST00000006035.13	1377	13	11	-3	11	3	multi-exon	FALSE	canonical	3	758	junction_4	74.7846445171437	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTCAGTGTGATTCTT	NA	False	NA	19	True	AATAAA	-22	NA	155849975	155860202	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_155850149_155850284_155850356_155850483_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075573	chr2	+	1141	11	NIC	ENSMUSG00000005881.14	novel	1377	13	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	252.247675906043	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTCTCAGTGTGATT	NA	False	NA	16	True	AATAAA	-19	NA	155850041	155860199	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_155850149_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075586	chr2	-	722	1	Genic_Genomic	ENSMUSG00000098950.8_ENSMUSG00000074643.13	novel	NA	NA	NA	NA	1733	1	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCCGCTCTTGTTGTGTT	NA	False	NA	1	True	AATAAA	-22	NA	155914482	155913760	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_-_155913800_155914500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075600	chr2	-	1577	9	NNC	ENSMUSG00000027618.18	novel	2051	13	NA	NA	5482	1	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_8	81.7823903722556	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTCCTGATCCTTGA	3208	False	NA	-12	True	AATAAA	-7	NA	155976247	155965568	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_155966248_155967200_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155976098
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075608	chr2	-	716	3	FSM	ENSMUSG00000027618.18	ENSMUST00000109600.2	709	3	-6	-1	0	1	multi-exon	FALSE	canonical	3	275	junction_2	22	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCGCGGGTCAATGGGACA	3106	False	NA	1	True	TTTAAA	-7	NA	155986106	155983705	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_155984163_155985286_155985379_155985939
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075652	chr2	-	350	2	NIC	ENSMUSG00000027620.17	novel	667	4	NA	NA	-2	25	combination_of_known_splicesites	FALSE	canonical	2	33	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTTGACTAAGGAACC	NA	False	NA	-1	True	NA	NA	NA	156022106	156019255	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_156019306_156021806
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075663	chr2	-	314	1	NIC	ENSMUSG00000027620.17	novel	585	5	NA	NA	-1	-228	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTCTTGATGACTT	NA	False	NA	NA	False	ATTAAA	-17	NA	156019822	156019508	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_156019500_156019800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075683	chr2	+	505	4	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	-4	-8174	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	142.494444336145	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTCTTTATTTCCTC	NA	False	NA	NA	False	AATAAA	-21	NA	156038669	156106370	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_156038718_156065254_156065370_156093695_156093868_156106200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075706	chr2	+	794	2	Genic_Genomic	ENSMUSG00000081751.2	novel	279	1	NA	NA	-17	88500	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	156164304	156253100	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_156164664_156252665
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075714	chr2	-	743	2	Genic_Genomic	ENSMUSG00000061272.9	novel	278	1	NA	NA	-6	88512	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGACACATTTTATTTTA	NA	False	NA	NA	False	NA	NA	NA	156253100	156164304	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_-_156164713_156252765
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075720	chr2	+	967	2	Genic_Genomic	ENSMUSG00000084017.2	novel	482	1	NA	NA	-26	23958	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	156228634	156253100	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_156229179_156252677
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075747	chr2	+	184	1	ISM	ENSMUSG00000061689.16	ENSMUST00000109567.10	4840	13	149072	1401	2832	5	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCGTTTCTCACCCTTCAG	NA	False	NA	16	True	ATTAAA	-19	NA	156604696	156604880	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_156604700_156604900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075768	chr2	-	803	1	Intergenic	novelGene_249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTCTTTCGTGTTTCCT	NA	False	NA	1	True	NA	NA	NA	156673428	156672625	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_-_156672600_156673400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075808	chr2	+	372	2	Genic_Genomic	ENSMUSG00000084113.2	novel	360	1	NA	NA	-32	103	multi-exon	FALSE	canonical	3	12	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGTCTATTGATTGTCA	NA	False	NA	NA	False	AATAAA	-17	NA	157010707	157011202	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_157010831_157010953
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075858	chr2	+	1132	2	FSM	ENSMUSG00000067786.17	ENSMUST00000153739.9	1146	2	32	-18	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTTTGTGGCTTCTTTT	9293	False	NA	12	True	NA	NA	NA	157402029	157404442	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_157402181_157403461
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075868	chr2	-	717	2	NNC	ENSMUSG00000087547.2	novel	629	2	NA	NA	-8	83	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	0	259	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGTGGTGGGAAGAAAGA	8699	False	NA	-1	True	AATAAA	-20	NA	157439248	157437419	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_157437903_157439014
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075873	chr2	-	533	2	NNC	ENSMUSG00000087547.2	novel	629	2	NA	NA	0	83	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGTGGTGGGAAGAAAGA	8707	False	NA	-1	True	AATAAA	-20	NA	157439240	157437419	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_157437906_157439193
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075874	chr2	-	545	3	NNC	ENSMUSG00000087547.2	novel	629	2	NA	NA	0	83	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	52.5	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGTGGTGGGAAGAAAGA	8707	False	NA	-1	True	AATAAA	-20	NA	157439240	157437419	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_157437906_157439014_157439041_157439207
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075889	chr2	-	451	2	NNC	ENSMUSG00000087547.2	novel	629	2	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGGCCAAATATGTATG	8707	False	NA	-9	True	NA	NA	NA	157439240	157437498	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_157437903_157439193
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075890	chr2	-	463	3	NNC	ENSMUSG00000087547.2	novel	629	2	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	8	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGGCCAAATATGTATG	8707	False	NA	-9	True	NA	NA	NA	157439240	157437498	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_157437903_157439014_157439041_157439207
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075923	chr2	+	272	1	ISM	ENSMUSG00000027651.17	ENSMUST00000103123.10	4504	7	48552	887	29090	-887	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGATGTTTCTTCTCC	4292	False	NA	10	True	AATAAA	-21	NA	157918968	157919240	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_157919000_157919200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075925	chr2	-	269	1	Genic_Genomic	ENSMUSG00000037820.16	novel	NA	NA	NA	NA	23069	3	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGCCTTGTCCTTTGGG	NA	False	NA	NA	False	AATAAA	-25	NA	157958587	157958318	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_-_157958300_157958600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075928	chr2	-	2053	4	ISM	ENSMUSG00000037820.16	ENSMUST00000103122.10	3596	13	22111	0	15411	0	3prime_fragment	FALSE	canonical	3	175	junction_1	15.084944665313	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTCTGCCTTGTCCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	157966245	157958321	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_157959872_157960766_157960904_157962044_157962206_157966040
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075938	chr2	-	920	6	NIC	ENSMUSG00000085385.8	novel	1046	7	NA	NA	-1	6	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	30.9476978142155	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTTTTAAATCTGTG	8326	False	NA	-11	True	AATAAA	-18	NA	158203463	158197698	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_158197962_158199117_158199184_158201101_158201353_158202446_158202520_158202862_158202991_158203324
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075956	chr2	+	2270	4	FSM	ENSMUSG00000027654.3	ENSMUST00000029183.3	2266	4	-4	0	-4	0	multi-exon	FALSE	canonical	3	282	junction_3	16.3571255285137	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGATTCTTTTTGTT	402	False	NA	8	True	AATAAA	-16	NA	158610008	158628557	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_158610508_158621764_158621933_158625052_158625178_158627079
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075974	chr2	+	3856	21	FSM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_7	40.333949719808	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGCGTCTGCCTGTTTGT	NA	False	NA	23	True	AATAAA	-21	NA	160487807	160564684	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_160488183_160488527_160488553_160512019_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000075990	chr2	+	1305	1	ISM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	75572	0	3991	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGCGTCTGCCTGTTTGT	NA	False	NA	23	True	AATAAA	-21	NA	160563379	160564684	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_160563400_160564700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076006	chr2	+	867	4	NNC	ENSMUSG00000084919.2	novel	630	3	NA	NA	199	2657	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	4.02768199119819	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGAGTGCCTGTGTTTG	NA	False	NA	11	True	ATTAAA	-22	NA	162232931	162238522	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_162233118_162233218_162233320_162236359_162236484_162238066
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076007	chr2	+	743	3	NNC	ENSMUSG00000084919.2	novel	630	3	NA	NA	199	2657	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	8.5	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGAGTGCCTGTGTTTG	NA	False	NA	11	True	ATTAAA	-22	NA	162232931	162238522	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_162233118_162233218_162233320_162238066
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076011	chr2	+	1759	6	FSM	ENSMUSG00000016921.15	ENSMUST00000130411.7	3527	6	0	1768	0	145	multi-exon	FALSE	canonical	3	865	junction_2	49.2097551304617	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCTGTTAATCTACC	NA	False	NA	10	True	AATAAA	-23	NA	162773447	162777273	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076021	chr2	+	1070	3	ISM	ENSMUSG00000017868.17	ENSMUST00000018012.14	2693	14	11870	9076	1088	-1782	internal_fragment	FALSE	canonical	3	17	junction_1	3.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTGAGCCCTTGTTT	NA	False	NA	NA	False	AATACA	-22	NA	162841119	162846971	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_162841189_162845191_162845288_162846066
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076028	chr2	+	2138	13	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	106.536378763313	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGTCATTGATATCCT	NA	False	NA	19	True	ATTAAA	-31	NA	162859387	162888061	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878638_162882546_162882635_162884610_162884720_162887122
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076036	chr2	+	1612	6	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	9541	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	144.162963343572	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGTCATTGATATCCT	NA	False	NA	19	True	ATTAAA	-31	NA	162873903	162888061	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_162874156_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076042	chr2	+	1393	6	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	9590	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	156.979743916214	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGTCATTGATATCCT	NA	False	NA	19	True	ATTAAA	-31	NA	162873952	162888061	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_162873986_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076048	chr2	+	582	1	Genic_Genomic	ENSMUSG00000017858.13	novel	NA	NA	NA	NA	23131	14	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTTTTTTCTCATTCCT	NA	False	NA	33	True	ATTAAA	-45	NA	162887493	162888075	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_162887500_162888100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076065	chr2	+	1368	1	Genic_Genomic	ENSMUSG00000017861.12	novel	NA	NA	NA	NA	8176	8	mono-exon	FALSE	NA	NA	NA	NA	NA	866	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTCCTTTTTCTGCTTTC	NA	False	NA	34	True	NA	NA	NA	162925248	162926616	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_162925200_162926600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076086	chr2	-	187	1	Intergenic	novelGene_250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTGTGAGTTAGTTGG	910	False	NA	NA	False	NA	NA	NA	162931534	162931347	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_-_162931300_162931500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076105	chr2	+	329	3	NNC	ENSMUSG00000053353.6	novel	740	2	NA	NA	157	1032	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAACCGTGGAGACAAATG	126	False	NA	NA	False	NA	NA	NA	163314621	163315957	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_163314671_163314941_163315081_163315816
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076113	chr2	+	725	1	ISM	ENSMUSG00000017679.17	ENSMUST00000171696.8	4522	5	15972	2	6766	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGCATTGTGGTTTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	163460205	163460930	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_163460200_163460900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076115	chr2	-	315	1	ISM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	21504	41	21498	-41	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGTAATAGAGTTCAATA	7105	False	NA	NA	False	AATAAA	-21	NA	163465547	163465232	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_163465200_163465500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076119	chr2	-	2325	10	FSM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	-25	1383	-25	-1383	multi-exon	FALSE	canonical	3	366	junction_6	56.7393868903371	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTGTATTTGTTTAGA	NA	False	NA	-3	True	ATTAAA	-22	NA	163487076	163466574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730_163478925_163481085_163481248_163486917
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076136	chr2	-	343	2	NNC	ENSMUSG00000017697.4	novel	1688	12	NA	NA	3225	-223	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATGGTGAATATGGTCT	NA	False	NA	1	True	AATAAA	-25	NA	163569561	163568726	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_163568972_163569463
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076140	chr2	+	2782	6	FSM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	231	0	231	0	multi-exon	FALSE	canonical	3	1292	junction_3	139.446620611616	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTGTGGATTGATGTG	NA	False	NA	21	True	AATAAA	-16	NA	163837110	163860508	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_163837286_163853521_163853825_163855925_163856050_163857150_163857315_163858022_163858119_163858588
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076144	chr2	+	1120	1	ISM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	22509	0	21966	0	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTGTGGATTGATGTG	5603	False	NA	21	True	AATAAA	-16	NA	163859388	163860508	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_163859400_163860500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076166	chr2	-	1981	1	ISM	ENSMUSG00000017009.4	ENSMUST00000017153.4	2458	5	16959	0	16959	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCAGTTTTATTTTTG	9431	False	NA	47	True	AATAAA	-24	NA	164268147	164266166	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_164266200_164268100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076186	chr2	+	285	2	Intergenic	novelGene_251	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCAAAACCTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	164365669	164393435	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_+_164365786_164393266
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076259	chr2	+	180	1	Genic_Genomic	ENSMUSG00000017723.12	novel	NA	NA	NA	NA	5314	2	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTGCCTCACTTTCTT	4972	False	NA	28	True	AATAAA	-34	NA	164410252	164410432	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_164410300_164410400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076262	chr2	-	598	3	FSM	ENSMUSG00000074594.10	ENSMUST00000099095.4	252	3	-186	-160	-186	4	multi-exon	FALSE	canonical	0	0	junction_2	1	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTTCTGTGGTTCTCA	3590	False	NA	NA	False	AATAAA	-18	NA	164493869	164491546	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_164491738_164492404_164492547_164493604
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076268	chr2	+	452	3	NIC	ENSMUSG00000074593.12	novel	443	4	NA	NA	0	18	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	6	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTTCATTTCCTTGCC	NA	False	NA	NA	False	AATAAA	-34	NA	164557224	164560006	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_164557395_164558914_164559085_164559894
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076272	chr2	+	292	3	NNC	ENSMUSG00000074593.12	novel	443	4	NA	NA	1234	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGAATTCAAAATTCTTG	718	False	NA	NA	False	AATAAA	-20	NA	164558458	164559992	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_164558483_164558914_164559085_164559894
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076281	chr2	+	562	5	FSM	ENSMUSG00000017299.14	ENSMUST00000135458.2	560	5	-1	-1	-1	1	multi-exon	FALSE	canonical	3	592	junction_3	38.3699100858993	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGTGTTGTGTTCAGTC	NA	False	NA	14	True	NA	NA	NA	164596057	164601480	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076349	chr2	-	234	1	ISM	ENSMUSG00000017307.17	ENSMUST00000134611.4	1017	5	11880	3	3488	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTGACCTTTAATAGAA	3901	False	NA	-1	True	AATAAA	-19	NA	164634921	164634687	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_164634700_164634900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076350	chr2	-	1175	7	NNC	ENSMUSG00000017307.17	novel	1152	6	NA	NA	-9	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	152.877311011877	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTGACCTTTAATAGAA	8217	False	NA	-1	True	AATAAA	-19	NA	164646751	164634687	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_164634931_164636904_164637100_164637571_164637730_164641639_164641866_164643262_164643337_164644916_164645054_164646609
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076355	chr2	-	611	3	NIC	ENSMUSG00000017307.17	novel	1152	6	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	24	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTGACCTTTAATAGAA	8217	False	NA	-1	True	AATAAA	-19	NA	164646751	164634687	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_164634931_164641639_164641866_164646609
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076357	chr2	-	971	5	NNC	ENSMUSG00000017307.17	novel	1152	6	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	145.516966364751	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTGACCTTTAATAGAA	8217	False	NA	-1	True	AATAAA	-19	NA	164646751	164634687	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_164634931_164636904_164637100_164637571_164637730_164641639_164641866_164646602
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076359	chr2	-	864	5	NNC	ENSMUSG00000017307.17	novel	1152	6	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	156.181785109532	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTGACCTTTAATAGAA	8217	False	NA	-1	True	AATAAA	-19	NA	164646751	164634687	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_164634931_164636904_164637100_164637671_164637730_164641639_164641866_164646609
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076365	chr2	-	1105	6	NNC	ENSMUSG00000017307.17	novel	1152	6	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	125.741003654337	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTGACCTTTAATAGAA	8217	False	NA	-1	True	AATAAA	-19	NA	164646751	164634687	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_164634931_164636900_164637100_164637571_164637730_164641639_164641866_164644916_164645054_164646609
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076368	chr2	-	1092	6	NNC	ENSMUSG00000017307.17	novel	1152	6	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	124.140243273485	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTGACCTTTAATAGAA	8217	False	NA	-1	True	AATAAA	-19	NA	164646751	164634687	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_164634931_164636904_164637100_164637571_164637730_164641648_164641866_164644916_164645054_164646609
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076374	chr2	-	1107	6	NNC	ENSMUSG00000017307.17	novel	1152	6	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	125.741003654337	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTGACCTTTAATAGAA	8217	False	NA	-1	True	AATAAA	-19	NA	164646751	164634687	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_164634931_164636898_164637100_164637571_164637730_164641639_164641866_164644916_164645054_164646609
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076405	chr2	+	120	1	ISM	ENSMUSG00000045822.5	ENSMUST00000052107.5	2708	2	16913	0	16913	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTGTTTTTTGAGACG	7852	False	NA	22	True	AATAAA	-22	NA	164663930	164664050	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_164663900_164664000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076424	chr2	+	1963	14	ISM	ENSMUSG00000017760.17	ENSMUST00000103093.10	2534	15	969	435	-5	-435	3prime_fragment	FALSE	canonical	3	937	junction_10	54.6384566651142	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTCTTCTCTGTGGCA	NA	False	NA	18	True	ATTAAA	-18	NA	164675761	164681504	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076464	chr2	+	396	1	NIC	ENSMUSG00000039849.7	novel	611	2	NA	NA	-1161	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTCGTTAACAACCAGT	9364	False	NA	12	True	AATAAA	-22	NA	164724691	164725087	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_164724700_164725100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076513	chr2	-	213	1	Genic_Genomic	ENSMUSG00000039671.19	novel	NA	NA	NA	NA	24786	5	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGTTGTGTTTAATTTA	NA	False	NA	38	True	AATAGA	-18	NA	165669256	165669043	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_-_165669000_165669300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076549	chr2	-	593	3	Intergenic	novelGene_252	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAGAGTGACATTTCCTT	NA	False	NA	NA	False	TATAAA	-4	NA	166279608	166265544	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_-_166265912_166275999_166276134_166279516
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076552	chr2	-	429	2	Intergenic	novelGene_253	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGCTCTCCGTCTCCG	NA	False	NA	NA	False	ATTAAA	-26	NA	166279611	166275799	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_-_166276134_166279516
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076561	chr2	+	834	2	Antisense	novelGene_ENSMUSG00000085682.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGCAAGGAAAGGGTTTA	NA	False	NA	NA	False	NA	NA	NA	166338171	166343131	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr2_+_166338330_166342455
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076611	chr2	+	887	3	ISM	ENSMUSG00000074578.15	ENSMUST00000143587.3	659	4	1	-13	1	13	intron_retention	FALSE	canonical	3	874	junction_1	67	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTCTGGGTTGGGTGGG	NA	False	NA	48	True	AATAAA	-34	NA	166905139	166907795	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_166905218_166905555_166905648_166907078
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076626	chr2	+	446	5	NNC	ENSMUSG00000074578.15	novel	572	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	409.357041590834	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGTCTTGAGTTTC	NA	False	NA	35	True	AATAAA	-45	NA	166905140	166907782	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_166905218_166905555_166905648_166907078_166907142_166907362_166907401_166907606
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076629	chr2	+	454	4	NNC	ENSMUSG00000074578.15	novel	572	5	NA	NA	0	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	446.952147575355	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTCTGGGTTGGGTGGG	NA	False	NA	48	True	AATAAA	-34	NA	166905140	166907795	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_166905218_166905555_166905648_166907078_166907138_166907569
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076630	chr2	+	372	4	NIC	ENSMUSG00000074578.15	novel	738	5	NA	NA	0	13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	440.292579491814	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTCTGGGTTGGGTGGG	NA	False	NA	48	True	AATAAA	-34	NA	166905140	166907795	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_166905218_166907078_166907138_166907353_166907401_166907606
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076631	chr2	+	441	4	NNC	ENSMUSG00000074578.15	novel	572	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	446.952147575355	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGTCTTGAGTTTC	NA	False	NA	35	True	AATAAA	-45	NA	166905140	166907782	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_166905218_166905555_166905648_166907078_166907142_166907573
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076634	chr2	+	419	4	NNC	ENSMUSG00000074578.15	novel	572	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	446.952147575355	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGTCTTGAGTTTC	NA	False	NA	35	True	AATAAA	-45	NA	166905140	166907782	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_166905218_166905555_166905648_166907078_166907153_166907606
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076635	chr2	+	444	5	NNC	ENSMUSG00000074578.15	novel	572	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	409.357041590834	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGTCTTGAGTTTC	NA	False	NA	35	True	AATAAA	-45	NA	166905140	166907782	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_166905218_166905555_166905648_166907078_166907138_166907360_166907401_166907606
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076638	chr2	+	448	5	NNC	ENSMUSG00000074578.15	novel	572	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	409.357041590834	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGTCTTGAGTTTC	NA	False	NA	35	True	AATAAA	-45	NA	166905140	166907782	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_166905218_166905555_166905648_166907078_166907142_166907360_166907401_166907606
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076645	chr2	+	443	5	NNC	ENSMUSG00000074578.15	novel	738	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	396.531524597982	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGTCTTGAGTTTC	NA	False	NA	35	True	AATAAA	-45	NA	166905140	166907782	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_166905218_166905555_166905640_166907078_166907138_166907353_166907401_166907606
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076667	chr2	+	789	4	NIC	ENSMUSG00000074578.15	novel	738	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	933	junction_2	34.8934887272046	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGTCTTGAGTTTC	NA	False	NA	35	True	AATAAA	-45	NA	166905140	166907782	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_166905648_166907078_166907138_166907353_166907401_166907606
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076673	chr2	+	571	5	FSM	ENSMUSG00000074578.15	ENSMUST00000238277.2	572	5	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_3	409.357041590834	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGTCTTGAGTTTC	NA	False	NA	35	True	AATAAA	-45	NA	166905141	166907782	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_166905218_166905555_166905648_166907078_166907138_166907232_166907401_166907606
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076679	chr2	+	444	4	NNC	ENSMUSG00000074578.15	novel	659	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	446.952147575355	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGTCTTGAGTTTC	NA	False	NA	35	True	AATAAA	-45	NA	166905141	166907782	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_166905218_166905555_166905648_166907078_166907142_166907569
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076707	chr2	+	1004	3	NIC	ENSMUSG00000074578.15	novel	572	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	935	junction_2	36.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGTCTTGAGTTTC	NA	False	NA	35	True	AATAAA	-45	NA	166905141	166907782	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_166905648_166907078_166907401_166907606
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076710	chr2	+	2434	2	NNC	ENSMUSG00000074578.15	novel	659	4	NA	NA	1	0	intron_retention	TRUE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGTCTTGAGTTTC	NA	False	NA	35	True	AATAAA	-45	NA	166905141	166907782	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_166906362_166906568
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076724	chr2	-	1141	6	ISM	ENSMUSG00000017969.14	ENSMUST00000018113.8	2107	10	19215	287	-12973	-287	3prime_fragment	FALSE	canonical	3	46	junction_5	14.8404851672713	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCTTCCAAATCGGGC	NA	False	NA	-31	True	AATAAA	-22	NA	167063309	167045113	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_167045389_167048653_167048806_167049101_167049284_167050100_167050270_167056727_167056910_167063128
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076731	chr2	-	275	1	ISM	ENSMUSG00000017969.14	ENSMUST00000018113.8	2107	10	37136	287	4948	-287	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCTTCCAAATCGGGC	1553	False	NA	-31	True	AATAAA	-22	NA	167045388	167045113	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_167045100_167045400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076744	chr2	+	639	5	Antisense	novelGene_ENSMUSG00000017969.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	2.27760839478607	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	65	False	NA	NA	False	NA	NA	NA	167062899	167065658	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr2_+_167063185_167063338_167063420_167063998_167064039_167065106_167065243_167065561
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076749	chr2	-	1324	1	ISM	ENSMUSG00000017929.14	ENSMUST00000109221.9	4210	9	49416	0	5931	0	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTAGTCGTCTCTCTG	NA	False	NA	-1	True	AGTAAA	-23	NA	167141687	167140363	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_167140400_167141700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076759	chr2	+	400	3	NNC	ENSMUSG00000039463.15	novel	2055	16	NA	NA	0	2874	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	47	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGGTTATGCATACATC	NA	False	NA	NA	False	ATTAAA	-27	NA	167263640	167270928	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_167263686_167266038_167266218_167270752
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076782	chr2	+	876	1	ISM	ENSMUSG00000006418.18	ENSMUST00000078050.7	2502	6	12209	0	11852	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCAATGTTTTCATTTAA	7490	False	NA	24	True	AATAAA	-25	NA	167357217	167358093	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_167357200_167358100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076791	chr2	-	1740	4	NNC	ENSMUSG00000078923.11	novel	2041	4	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1067.54890598355	35	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGGTGGTTTTATTTTAA	9410	False	NA	NA	False	AATAAA	-22	NA	167473923	167449763	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_167451168_167452226_167452350_167459748_167459898_167473859
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076822	chr2	+	516	1	ISM	ENSMUSG00000027540.14	ENSMUST00000029053.8	4213	9	44119	2424	25398	2224	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTTTTTGTTATTTCT	NA	False	NA	NA	False	TATAAA	-1	NA	167818365	167818881	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_167818400_167818900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076823	chr2	+	1425	4	Genic_Genomic	ENSMUSG00000118526.3	novel	577	8	NA	NA	24898	-23530	multi-exon	FALSE	canonical	0	0	junction_2	1.69967317119759	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTAGTGTGTGTGCA	NA	False	NA	NA	False	ATTAAA	-21	NA	167981694	167991054	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_167981813_167987089_167987222_167989471_167989554_167989961
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076830	chr2	-	1314	2	FSM	ENSMUSG00000087648.2	ENSMUST00000129713.2	1309	2	-1	-4	-1	4	multi-exon	FALSE	canonical	3	24	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAGCTACTTTATTTGGC	7128	False	NA	0	True	NA	NA	NA	167996434	167994518	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_167995672_167996273
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076836	chr2	+	556	2	Intergenic	novelGene_254	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTCTTTAAATTGATTT	NA	False	NA	NA	False	NA	NA	NA	168003611	168004344	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_+_168003676_168003852
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076843	chr2	-	1085	9	FSM	ENSMUSG00000078919.11	ENSMUST00000154111.8	2293	9	-7	1215	-7	18	multi-exon	FALSE	canonical	3	450	junction_3	8.66656650583148	2089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATGTGAGTGCAAGTTT	NA	False	NA	-1	True	AATAAA	-41	NA	168072306	168052182	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076848	chr2	-	1023	8	NNC	ENSMUSG00000078919.11	novel	722	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	161.63438207692	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGCTTTCATTTAGA	NA	False	NA	-19	True	AATAAA	-23	NA	168072284	168052200	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061952_168062034_168065040_168065075_168069322_168069423_168072112
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076849	chr2	-	976	8	NIC	ENSMUSG00000078919.11	novel	2293	9	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	20	junction_2	153.11846820721	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGCTTTCATTTAGA	NA	False	NA	-19	True	AATAAA	-23	NA	168072284	168052200	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_168052557_168053285_168053401_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076851	chr2	-	1032	8	NNC	ENSMUSG00000078919.11	novel	2293	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	160.208282799458	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGCTTTCATTTAGA	NA	False	NA	-19	True	AATAAA	-23	NA	168072284	168052200	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168069301_168069423_168072112
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076852	chr2	-	1033	8	NNC	ENSMUSG00000078919.11	novel	2293	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	160.208282799458	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGCTTTCATTTAGA	NA	False	NA	-19	True	AATAAA	-23	NA	168072284	168052200	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062056_168069322_168069423_168072112
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076853	chr2	-	993	9	NIC	ENSMUSG00000078919.11	novel	2293	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	32	junction_2	140.419683449294	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGCTTTCATTTAGA	NA	False	NA	-19	True	AATAAA	-23	NA	168072285	168052200	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_168052557_168053285_168053348_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076856	chr2	-	1049	9	NNC	ENSMUSG00000078919.11	novel	2293	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	152	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGCTTTCATTTAGA	NA	False	NA	-19	True	AATAAA	-23	NA	168072284	168052200	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_168052557_168053281_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076857	chr2	-	1057	8	NNC	ENSMUSG00000078919.11	novel	2293	9	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	160.208282799458	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGCTTTCATTTAGA	NA	False	NA	-19	True	AATAAA	-23	NA	168072285	168052200	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062079_168069322_168069423_168072112
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076858	chr2	-	1049	9	NNC	ENSMUSG00000078919.11	novel	2293	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	152.308024657271	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGCTTTCATTTAGA	NA	False	NA	-19	True	AATAAA	-23	NA	168072284	168052200	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061952_168062034_168065040_168065075_168069322_168069423_168072112
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076884	chr2	-	807	8	NNC	ENSMUSG00000078919.11	novel	722	8	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	161.63438207692	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCCCGTGTTCATTTCA	NA	False	NA	-13	True	CATAAA	-17	NA	168072284	168052434	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061934_168062034_168065040_168065075_168069322_168069423_168072112
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076919	chr2	-	1312	1	ISM	ENSMUSG00000027551.16	ENSMUST00000087971.11	2438	6	28600	0	-14039	0	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTGTATTGTATAGTTT	NA	False	NA	0	True	AATAAA	-29	NA	168768592	168767280	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_168767300_168768600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076983	chr2	+	1110	1	FSM	ENSMUSG00000084013.2	ENSMUST00000118388.2	846	1	-73	-191	-73	191	mono-exon	FALSE	NA	NA	NA	NA	NA	291	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTGGGTGGTTGTTGTT	NA	False	NA	NA	False	AATAAA	-38	NA	170126881	170127991	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_170126900_170128000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000076992	chr2	-	694	1	ISM	ENSMUSG00000013523.14	ENSMUST00000154650.8	2222	7	58672	153	1903	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGGTGGTTTTTTTTTT	6104	False	NA	1	True	AATAAA	-22	NA	170189757	170189063	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_170189100_170189800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077014	chr2	+	675	4	NNC	ENSMUSG00000052033.14	novel	935	4	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	373.855884295302	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTCTATATTATTATT	4038	False	NA	13	True	ATTAAA	-16	NA	170353350	170360988	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_170353390_170357658_170357758_170358469_170358611_170360592
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077024	chr2	+	681	4	NNC	ENSMUSG00000052033.14	novel	935	4	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	349.236627835945	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTCTATATTATTATT	4045	False	NA	13	True	ATTAAA	-16	NA	170353357	170360988	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_170353390_170357658_170357767_170358469_170358615_170360592
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077040	chr2	+	758	4	FSM	ENSMUSG00000052033.14	ENSMUST00000109148.8	736	4	-77	55	-2	1	multi-exon	FALSE	canonical	3	14	junction_1	387.259029017472	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTCTATATTATTATT	4050	False	NA	13	True	ATTAAA	-16	NA	170353362	170360988	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_170353476_170357658_170357767_170358469_170358611_170360592
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077042	chr2	+	1140	4	FSM	ENSMUSG00000052033.14	ENSMUST00000170167.8	666	4	-117	-357	-2	1	multi-exon	FALSE	canonical	3	5	junction_1	391.486341467433	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTCTATATTATTATT	4050	False	NA	13	True	ATTAAA	-16	NA	170353362	170360988	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_170353858_170357658_170357767_170358469_170358611_170360592
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077049	chr2	+	398	1	NIC	ENSMUSG00000052033.14	novel	935	4	NA	NA	3781	1	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTCTATATTATTATT	NA	False	NA	13	True	ATTAAA	-16	NA	170360590	170360988	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_170360600_170361000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077058	chr2	-	576	3	Intergenic	novelGene_255	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	35	junction_2	1.5	226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTCATGGTGTCTCT	NA	False	NA	3	True	NA	NA	NA	170515779	170512868	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_-_170513139_170515342_170515518_170515648
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077070	chr2	-	268	1	Intergenic	novelGene_256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGCCTTGGTCATGGTG	NA	False	NA	-2	True	NA	NA	NA	170513141	170512873	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_-_170512900_170513100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077093	chr2	-	542	3	Intergenic	novelGene_257	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGGTTTTGTTTTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	171774805	171763983	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_-_171764297_171765609_171765713_171774679
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077124	chr2	-	1835	9	NNC	ENSMUSG00000027496.16	novel	1862	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	434.182835191581	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAGTACGTGGGTAATC	NA	False	NA	-8	True	AATATA	-16	NA	172212441	172198115	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205703_172206361_172206417_172208841_172209092_172210905_172210953_172212392
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077129	chr2	-	1837	9	NNC	ENSMUSG00000027496.16	novel	1862	9	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	432.295616447819	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGAGTACGTGGGTAA	NA	False	NA	-10	True	AATATA	-14	NA	172212441	172198117	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_172198902_172199000_172199173_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212392
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077221	chr2	-	865	5	NIC	ENSMUSG00000055897.14	novel	755	6	NA	NA	0	8	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	3.67423461417477	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTCTTTCTCCTTGATT	NA	False	NA	NA	False	ATTAAA	-17	NA	173501161	173437890	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_173438321_173438832_173438981_173450525_173450673_173457275_173457370_173501115
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077246	chr2	+	533	1	ISM	ENSMUSG00000039263.17	ENSMUST00000044415.16	2467	12	11821	368	10597	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTCCGCTCACTTTT	NA	False	NA	8	True	ATTAAA	-17	NA	173963962	173964495	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_173964000_173964500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077266	chr2	+	477	1	ISM	ENSMUSG00000027523.21	ENSMUST00000109096.9	2465	13	61948	0	1618	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTGCTCTTTGATT	NA	False	NA	15	True	AATAAA	-19	NA	174188060	174188537	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_174188100_174188500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077274	chr2	+	407	1	Genic_Genomic	ENSMUSG00000016253.13	novel	NA	NA	NA	NA	737	3	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTACTCATTTCTTAAG	NA	False	NA	43	True	AATAAA	-24	NA	174268891	174269298	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_174268900_174269300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077281	chr2	-	491	1	NIC	ENSMUSG00000016256.11	novel	1441	6	NA	NA	11056	0	mono-exon	FALSE	NA	NA	NA	NA	NA	737	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGTACTTTATTTACA	6230	False	NA	0	True	AGTAAA	-17	NA	174269776	174269285	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_174269300_174269800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077284	chr2	-	1306	7	NNC	ENSMUSG00000016256.11	novel	1441	6	NA	NA	59	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	192.177363102133	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTGTGTACTTTATTTAC	5388	False	NA	-1	True	AGTAAA	-16	NA	174280773	174269286	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_174269590_174269664_174269776_174270370_174270537_174270848_174271000_174275280_174275461_174279957_174280122_174280542
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077302	chr2	-	149	1	NIC	ENSMUSG00000016252.8	novel	421	3	NA	NA	2827	1	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGTTTTGTTTCTGTTC	NA	False	NA	-6	True	AATAAA	-20	NA	174303015	174302866	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_174302900_174303000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077304	chr2	-	397	3	NNC	ENSMUSG00000016252.8	novel	421	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1326.5	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGGTTTTGTTTCTGTT	NA	False	NA	-7	True	AATAAA	-19	NA	174305884	174302867	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_174303015_174304299_174304423_174305757
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077357	chr2	+	458	4	FSM	ENSMUSG00000078906.10	ENSMUST00000109070.3	1281	4	-141	964	-63	672	multi-exon	FALSE	canonical	3	436	junction_1	343.521307765456	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGTGGTAAAGCTTTTA	NA	False	NA	NA	False	NA	NA	NA	174851970	174860077	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_174852115_174858430_174858558_174858749_174858811_174859951
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077415	chr2	-	446	3	Fusion	ENSMUSG00000078902.4_ENSMUSG00000078905.9_ENSMUSG00000090093.9	novel	564	3	NA	NA	11	-147	multi-exon	FALSE	canonical	3	11	junction_2	3	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGATATGTAATTTTTGT	NA	False	NA	NA	False	NA	NA	NA	175017653	174905245	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr2_-_174905454_174974988_174975116_175017542
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077416	chr2	-	446	3	Fusion	ENSMUSG00000078902.4_ENSMUSG00000078905.9	novel	564	3	NA	NA	11	-147	multi-exon	FALSE	canonical	0	0	junction_1	61	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGATATGTAATTTTTGT	NA	False	NA	NA	False	NA	NA	NA	175017653	174905245	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr2_-_174905454_175013640_175013768_175017542
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077425	chr2	-	420	3	Fusion	ENSMUSG00000078902.4_ENSMUSG00000081949.4	novel	401	4	NA	NA	11	-1288	multi-exon	FALSE	canonical	0	0	junction_1	17.5	28	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGTATGTAATTATACTT	NA	False	NA	NA	False	NA	NA	NA	175017653	174947534	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr2_-_174947744_174974988_174975089_175017542
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077448	chr2	-	419	3	Fusion	ENSMUSG00000078902.4_ENSMUSG00000090093.9	novel	703	3	NA	NA	11	143	multi-exon	FALSE	canonical	3	30	junction_1	2.5	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGATATGTAATTATTGT	NA	False	NA	NA	False	NA	NA	NA	175017653	174974574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr2_-_174974783_174974988_174975089_175017542
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077449	chr2	-	419	3	Fusion	ENSMUSG00000078902.4_ENSMUSG00000090093.9	novel	703	3	NA	NA	11	143	multi-exon	FALSE	canonical	0	0	junction_1	19	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGATATGTAATTATTGT	NA	False	NA	NA	False	NA	NA	NA	175017653	174974574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr2_-_174974783_175013640_175013741_175017542
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077451	chr2	-	446	3	Fusion	ENSMUSG00000078902.4_ENSMUSG00000090093.9	novel	703	3	NA	NA	11	143	multi-exon	FALSE	canonical	0	0	junction_1	61	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGATATGTAATTATTGT	NA	False	NA	NA	False	NA	NA	NA	175017653	174974574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr2_-_174974783_175013640_175013768_175017542
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077479	chr2	-	1521	4	FSM	ENSMUSG00000078903.11	ENSMUST00000109055.2	965	4	-29	-527	-11	527	multi-exon	FALSE	canonical	3	66	junction_2	81.8141525382715	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACGTGTGCAAATTTTA	NA	False	NA	NA	False	NA	NA	NA	175048721	175038207	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_175039399_175039599_175039727_175044851_175044907_175048573
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077484	chr2	+	720	1	FSM	ENSMUSG00000084323.5	ENSMUST00000121572.2	624	1	-28	-68	-28	68	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCACAGCTTTAGATTAG	NA	False	NA	NA	False	NA	NA	NA	175112320	175113040	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_175112300_175113000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077488	chr2	+	483	3	Fusion	ENSMUSG00000078898.10_ENSMUSG00000078901.9	novel	3382	3	NA	NA	-65	-795	multi-exon	FALSE	canonical	3	17	junction_2	20	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTAATTATTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	175116852	175222784	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr2_+_175116997_175222239_175222367_175222572
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077493	chr2	-	472	5	FSM	ENSMUSG00000078899.10	ENSMUST00000121393.9	4402	5	-47	3977	-47	-1189	multi-exon	FALSE	canonical	2	4	junction_1	105.8828952192	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTAACCAATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	175180037	175167724	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_175167842_175168998_175169060_175169264_175169392_175176415_175176471_175179925
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077503	chr2	+	430	3	FSM	ENSMUSG00000078898.10	ENSMUST00000131676.8	1272	3	47	795	-9	-795	multi-exon	FALSE	canonical	3	17	junction_2	13	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTAATTATTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	175214275	175222784	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_175214367_175222239_175222367_175222572
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077528	chr2	+	1327	2	Antisense	novelGene_ENSMUSG00000083481.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175544675	175675828	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr2_+_175544937_175674762
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077551	chr2	+	1401	5	ISM	ENSMUSG00000078887.11	ENSMUST00000147820.2	599	6	32	323	-9	-88	5prime_fragment	FALSE	canonical	3	14	junction_2	92.1259328310981	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTCCCATTTCATATA	NA	False	NA	NA	False	NA	NA	NA	175661069	175671361	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_175661175_175664841_175664897_175666200_175666303_175670021_175670149_175670349
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077581	chr2	+	510	4	NNC	ENSMUSG00000078894.10	novel	3823	5	NA	NA	-26	147	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	14.5143607047182	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTAATTATTGTTTGC	3009	False	NA	NA	False	NA	NA	NA	175968335	175977655	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_175968452_175971917_175971973_175977111_175977239_175977443
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077589	chr2	+	470	5	FSM	ENSMUSG00000078894.10	ENSMUST00000099009.9	3823	5	8	3345	4	-626	multi-exon	FALSE	canonical	3	13	junction_2	24.8432586429397	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTAACCAATGTGGTA	3043	False	NA	NA	False	NA	NA	NA	175968369	175978776	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_175968480_175971917_175971973_175977111_175977239_175977443_175977505_175978659
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077605	chr2	+	1280	3	FSM	ENSMUSG00000089951.9	ENSMUST00000127687.8	1127	3	-70	-83	-3	83	multi-exon	FALSE	canonical	3	22	junction_2	45	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTCCCATTTCATGTA	NA	False	NA	NA	False	NA	NA	NA	176115383	176124962	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_176115528_176123621_176123749_176123953
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077630	chr2	+	1247	3	FSM	ENSMUSG00000078879.11	ENSMUST00000121956.8	1271	3	26	-2	-14	2	multi-exon	FALSE	canonical	3	19	junction_2	40	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTCCCATTTCATTTA	NA	False	NA	NA	False	NA	NA	NA	176362340	176371669	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_176362453_176370328_176370456_176370661
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077641	chr2	+	1325	1	Intergenic	novelGene_258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176415069	176416394	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_+_176415100_176416400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077668	chr2	-	476	4	NNC	ENSMUSG00000074527.12	novel	3823	5	NA	NA	4	-974	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	13.5728487143349	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTAATTATTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	176619594	176610308	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_176610521_176610725_176610853_176615991_176616047_176619512
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077685	chr2	+	472	5	Fusion	ENSMUSG00000078875.11_ENSMUSG00000078872.10	novel	683	5	NA	NA	-21	33916	multi-exon	FALSE	canonical	3	20	junction_4	17.3835410661925	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGTAATTCCTCCCCAA	NA	False	NA	NA	False	NA	NA	NA	176692727	176813056	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr2_+_176692840_176696293_176696349_176701473_176701601_176776368_176776430_176812939
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077693	chr2	+	405	4	Fusion	ENSMUSG00000078875.11_ENSMUSG00000078872.10	novel	752	4	NA	NA	-14	33911	multi-exon	FALSE	canonical	2	13	junction_1	21.6384431561566	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATGACTGTAATTCCTC	NA	False	NA	NA	False	NA	NA	NA	176692734	176813051	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr2_+_176692840_176701473_176701601_176776368_176776430_176812939
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077774	chr2	-	899	2	Intergenic	novelGene_260	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	8799	False	NA	NA	False	NA	NA	NA	177077014	176881978	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_-_176882112_177076248
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077776	chr2	-	1325	1	Intergenic	novelGene_259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176883303	176881978	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_-_176882000_176883300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077813	chr2	-	253	1	Intergenic	novelGene_261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGTCTGTCCATCCT	NA	False	NA	NA	False	NA	NA	NA	176954995	176954742	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_-_176954700_176955000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077842	chr2	-	361	4	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-10837	-843	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	249.909761491801	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCATGACTGTAACCAATG	NA	False	NA	-38	True	NA	NA	NA	176969666	176957289	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_176957402_176958542_176958604_176958795_176958923_176969605
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077859	chr2	-	392	4	FSM	ENSMUSG00000078868.4	ENSMUST00000108959.3	1581	4	-84	1273	-84	-1273	multi-exon	FALSE	canonical	3	39	junction_2	8.04155872120988	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGTAACCAATGTGGAA	NA	False	NA	NA	False	NA	NA	NA	177016184	177007585	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_177007703_177008856_177008918_177009124_177009252_177016097
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077920	chr2	+	1199	3	ISM	ENSMUSG00000078866.11	ENSMUST00000108952.4	1569	4	-148	1665	-35	-1665	5prime_fragment	FALSE	canonical	3	64	junction_2	12	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTTCTTCCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	177156490	177166331	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_177156642_177165078_177165206_177165410
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077949	chr2	+	463	4	Fusion	ENSMUSG00000094786.2_ENSMUSG00000078864.11	novel	1074	3	NA	NA	-46	-250	multi-exon	FALSE	canonical	3	66	junction_1	90.6899479913108	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGTGGTAAGGACTTTA	NA	False	NA	NA	False	NA	NA	NA	177189961	177411505	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr2_+_177190111_177409836_177409964_177410168_177410230_177411379
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077951	chr2	+	517	5	Fusion	ENSMUSG00000094786.2_ENSMUSG00000078864.11	novel	1077	4	NA	NA	-45	-250	multi-exon	FALSE	canonical	3	49	junction_2	85.9200209497181	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGTGGTAAGGACTTTA	NA	False	NA	NA	False	NA	NA	NA	177189962	177411505	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr2_+_177190111_177404638_177404694_177409836_177409964_177410168_177410230_177411379
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000077964	chr2	+	594	6	Fusion	ENSMUSG00000094786.2_ENSMUSG00000078864.11	novel	1077	4	NA	NA	-20	-250	multi-exon	FALSE	canonical	3	56	junction_3	79.4742725666615	87	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGTGGTAAGGACTTTA	NA	False	NA	NA	False	NA	NA	NA	177189987	177411505	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr2_+_177190111_177404638_177404694_177405994_177406097_177409836_177409964_177410168_177410230_177411379
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078027	chr2	-	358	4	NIC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-35	-964	combination_of_known_splicesites	FALSE	canonical	3	106	junction_2	247.107264158705	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGTGGTAAAGCTTTTA	2302	False	NA	NA	False	NA	NA	NA	177270038	177261960	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_-_177262087_177263226_177263288_177266761_177266817_177269922
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078029	chr2	-	444	4	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-5519	-964	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	500.198182945742	177	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGTGGTAAAGCTTTTA	NA	False	NA	NA	False	NA	NA	NA	177275522	177261960	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_177262087_177263226_177263288_177263479_177263607_177275392
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078052	chr2	-	456	4	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	1162	-976	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	498.077860936978	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGACTGTAACCAATGTG	3510	False	NA	NA	False	NA	NA	NA	177268830	177261972	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_177262087_177263226_177263288_177263479_177263607_177268676
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078090	chr2	+	556	6	FSM	ENSMUSG00000078864.11	ENSMUST00000148388.2	744	6	-62	250	-62	-250	multi-exon	FALSE	canonical	3	97	junction_4	86.0497530501977	539	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGTGGTAAGGACTTTA	NA	False	NA	NA	False	NA	NA	NA	177401018	177411505	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_177401169_177404638_177404694_177409531_177409569_177409836_177409964_177410168_177410230_177411379
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078136	chr2	-	4438	4	FSM	ENSMUSG00000095362.8	ENSMUST00000108939.9	1576	4	-62	-2800	-44	2800	multi-exon	FALSE	canonical	3	248	junction_1	217.946476609893	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	-4	True	NA	NA	NA	177482173	177470783	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_177474890_177476043_177476105_177476312_177476440_177482029
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078157	chr2	+	620	3	NNC	ENSMUSG00000074521.10	novel	1451	3	NA	NA	14	34625	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	0	86	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGTTGTTTGAAATATG	NA	False	NA	NA	False	TTTAAA	-10	NA	177538902	177582202	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_177539047_177568633_177568718_177581810
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078198	chr2	+	829	1	Intergenic	novelGene_262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	177679741	177680570	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_+_177679700_177680600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078213	chr2	-	1610	3	FSM	ENSMUSG00000078861.9	ENSMUST00000108923.2	1372	3	-32	-206	-32	192	multi-exon	FALSE	canonical	3	51	junction_1	29	432	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTAACCAATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	177720301	177710076	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_-_177711409_177711615_177711743_177720150
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078237	chr2	+	663	1	Genic_Genomic	ENSMUSG00000039108.15	novel	NA	NA	NA	NA	6895	1	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGTCCGTCACCTGTG	NA	False	NA	20	True	AATAAA	-21	NA	179676596	179677259	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_179676600_179677300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078257	chr2	-	211	1	Genic_Genomic	ENSMUSG00000027566.16	novel	NA	NA	NA	NA	912	8	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAACCTGTCGTCATTTG	NA	False	NA	-4	True	AATAAA	-25	NA	179678369	179678158	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_-_179678200_179678400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078305	chr2	-	194	1	Intergenic	novelGene_263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGCTGGTGAGATGGC	NA	False	NA	NA	False	NA	NA	NA	179718955	179718761	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_-_179718800_179719000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078308	chr2	+	1213	2	ISM	ENSMUSG00000039050.9	ENSMUST00000040668.9	2805	14	39795	-2	9722	2	3prime_fragment	FALSE	canonical	3	180	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGTTGAAGGTTTGATT	NA	False	NA	12	True	ATTAAA	-18	NA	179800893	179804475	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_179800913_179803281
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078312	chr2	+	1197	1	Genic_Genomic	ENSMUSG00000039050.9	novel	NA	NA	NA	NA	12107	2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGTTGAAGGTTTGATT	NA	False	NA	12	True	ATTAAA	-18	NA	179803278	179804475	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr2_+_179803300_179804500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078412	chr2	+	336	6	NNC	ENSMUSG00000039001.13	novel	394	6	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	2621.94896975513	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTTTTGCTGTTTTTA	NA	False	NA	25	True	AATAAA	-26	NA	179899208	179900237	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_179899241_179899413_179899459_179899580_179899645_179899778_179899851_179900022_179900079_179900170
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078413	chr2	+	345	6	NNC	ENSMUSG00000039001.13	novel	394	6	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2623.01449481317	56	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTTTTGCTGTTTTTA	NA	False	NA	25	True	AATAAA	-26	NA	179899208	179900237	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_179899241_179899413_179899477_179899589_179899645_179899778_179899851_179900022_179900079_179900170
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078437	chr2	+	345	6	NNC	ENSMUSG00000039001.13	novel	394	6	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2837.86560640211	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTTTTGCTGTTTTTA	NA	False	NA	25	True	AATAAA	-26	NA	179899209	179900237	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_179899241_179899413_179899477_179899580_179899645_179899778_179899851_179900022_179900071_179900170
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078438	chr2	+	343	6	NNC	ENSMUSG00000039001.13	novel	481	5	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2837.86560640211	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTTTTGCTGTTTTTA	NA	False	NA	25	True	AATAAA	-26	NA	179899209	179900237	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_179899241_179899413_179899477_179899580_179899645_179899778_179899851_179900022_179900083_179900184
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078440	chr2	+	339	6	NNC	ENSMUSG00000039001.13	novel	394	6	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2837.86560640211	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTTTTGCTGTTTTTA	NA	False	NA	25	True	AATAAA	-26	NA	179899209	179900237	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_179899241_179899413_179899477_179899580_179899645_179899778_179899851_179900022_179900079_179900184
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078441	chr2	+	525	5	NIC	ENSMUSG00000039001.13	novel	394	6	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	3954	junction_4	1558.50577477275	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTTTTGCTGTTTTTA	NA	False	NA	25	True	AATAAA	-26	NA	179899209	179900237	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_179899241_179899413_179899477_179899580_179899645_179899778_179900079_179900170
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078458	chr2	+	346	6	NNC	ENSMUSG00000039001.13	novel	394	6	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2798.83568649537	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAAGTCTGCTTTTGCTGT	NA	False	NA	20	True	AATAAA	-21	NA	179899209	179900232	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_179899241_179899413_179899477_179899580_179899645_179899778_179899855_179900028_179900079_179900170
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078465	chr2	+	359	6	NNC	ENSMUSG00000039001.13	novel	394	6	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2837.86560640211	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTTTTGCTGTTTTTA	NA	False	NA	25	True	AATAAA	-26	NA	179899209	179900237	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_179899241_179899413_179899477_179899580_179899645_179899778_179899851_179900022_179900085_179900170
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078516	chr2	+	2200	8	NNC	ENSMUSG00000049401.11	novel	2449	7	NA	NA	-27	-5	at_least_one_novel_splicesite	TRUE	canonical	3	58	junction_7	13.998542198153	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTGGCCGTGTTCT	NA	False	NA	17	True	AATAAA	-17	NA	180231227	180237624	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_180231415_180232779_180232849_180233409_180233489_180234219_180234299_180234896_180234964_180235362_180235512_180236000_180236947_180237000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078525	chr2	+	1554	5	FSM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	97	4	97	-1	multi-exon	FALSE	canonical	3	169	junction_3	7.56224173112709	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACAATGGCTTCTAAAAAG	NA	False	NA	14	True	AATAAA	-25	NA	180352006	180360522	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359630
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078535	chr2	+	2216	13	FSM	ENSMUSG00000023393.16	ENSMUST00000094218.4	2275	13	59	0	-57	0	multi-exon	TRUE	canonical	3	124	junction_2	30.6879455161143	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTGTTTTATTCAATA	NA	False	NA	29	True	ATTAAA	-14	NA	180367114	180384073	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_180367245_180373672_180373871_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078539	chr2	+	192	1	Intergenic	novelGene_264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGTTTTAATGTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	180543571	180543763	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr2_+_180543600_180543800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078601	chr2	+	545	2	FSM	ENSMUSG00000016344.15	ENSMUST00000135011.2	510	2	-33	-2	-33	2	multi-exon	TRUE	canonical	3	861	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTATGTTTGAAACAT	3970	False	NA	3	True	AATAAA	-19	NA	180829673	180830299	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_180829894_180829974
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078605	chr2	+	326	1	NIC	ENSMUSG00000016344.15	novel	1160	5	NA	NA	267	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTATGTTTGAAACAT	4270	False	NA	3	True	AATAAA	-19	NA	180829973	180830299	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr2_+_180830000_180830300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078628	chr2	-	658	3	ISM	ENSMUSG00000038671.16	ENSMUST00000152580.8	1822	5	4029	-5	-1165	5	3prime_fragment	FALSE	canonical	3	258	junction_2	22.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAGGTATTCAGAGACAA	NA	False	NA	NA	False	NA	NA	NA	181003098	181001102	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_-_181001355_181001431_181001533_181002793
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078675	chr2	+	980	8	NNC	ENSMUSG00000000827.19	novel	3603	8	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	348.781845155685	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCACTGTGCCATCCTTTC	NA	False	NA	34	True	CATAAA	-31	NA	181138996	181157178	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181153369_181153409_181154831_181154881_181156872
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078688	chr2	+	1044	6	FSM	ENSMUSG00000000826.17	ENSMUST00000116365.9	3728	6	25	2659	0	0	multi-exon	FALSE	canonical	3	78	junction_5	67.7642973843897	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTGTTTTATCCTTTT	7071	False	NA	22	True	TTTAAA	-18	NA	181162343	181191383	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078696	chr2	-	1817	14	NNC	ENSMUSG00000089917.8	novel	1849	15	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	39.7572515807423	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTGTGGCAGAATGTAACC	4572	False	NA	1	True	AATAAA	-23	NA	181223776	181210941	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr2_-_181211184_181211260_181211418_181211488_181211597_181211701_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181214853_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216828_181223648
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078736	chr2	+	1982	1	ISM	ENSMUSG00000027589.15	ENSMUST00000029116.14	3569	7	17617	9	3908	6	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGTATTGCTTCTGTG	30	False	NA	17	True	AATAAA	-20	NA	181497263	181499245	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr2_+_181497300_181499200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078777	chr3	+	954	6	NIC	ENSMUSG00000027500.11	novel	2073	5	NA	NA	-35	3	combination_of_known_junctions	FALSE	canonical	3	103	junction_5	694.848357557244	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTTTGGTCTGGTCTCTCG	NA	False	NA	26	True	AATAAA	-26	NA	8574539	8626669	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325_8625397_8626398
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078787	chr3	+	899	6	NNC	ENSMUSG00000027500.11	novel	2073	5	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_5	730.643989915745	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACGGTTTGGTCTGGTCTC	NA	False	NA	23	True	AATAAA	-23	NA	8574586	8626666	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325_8625397_8626403
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078797	chr3	+	240	1	NIC	ENSMUSG00000027500.11	novel	2073	5	NA	NA	-2	-1072	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGCTTGATGTTTAAA	NA	False	NA	23	True	NA	NA	NA	8625323	8625563	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_+_8625300_8625600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078840	chr3	-	1528	1	ISM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	73762	3841	31292	164	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTTTTATTTTTCTT	8744	False	NA	-3	True	AATATA	-17	NA	8996021	8994493	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_8994500_8996000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078841	chr3	-	2242	6	NNC	ENSMUSG00000027506.16	novel	6317	6	NA	NA	-17	164	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1105.06589848751	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTTTTATTTTTCTT	NA	False	NA	-3	True	AATATA	-17	NA	9069555	8994493	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_8996225_9000047_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078852	chr3	-	665	2	FSM	ENSMUSG00000040209.13	ENSMUST00000192832.2	1455	2	1194	-404	1194	0	multi-exon	FALSE	canonical	3	358	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTTTCTATGTCTGTTT	NA	False	NA	-15	True	NA	NA	NA	9504902	9503351	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_9503959_9504844
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078937	chr3	-	570	4	FSM	ENSMUSG00000078784.9	ENSMUST00000108365.4	559	4	-6	-5	-6	0	multi-exon	FALSE	canonical	3	74	junction_3	2488.45909483493	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTAAATCTTGTTAAT	NA	False	NA	0	True	AATAAA	-23	NA	14676287	14671343	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_14671469_14672236_14672354_14674600_14674718_14676076
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078939	chr3	-	659	5	NNC	ENSMUSG00000078784.9	novel	435	4	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	2521.17416841836	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTAAATCTTGTTAAT	NA	False	NA	0	True	AATAAA	-23	NA	14676328	14671343	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_14671469_14671894_14672136_14672236_14672354_14674600_14674718_14676269
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078947	chr3	-	1095	4	NNC	ENSMUSG00000078784.9	novel	435	4	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_1	2375.53451295118	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTAAATCTTGTTAAT	NA	False	NA	0	True	AATAAA	-23	NA	14676338	14671343	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_14672136_14672236_14672354_14674600_14674718_14676269
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078958	chr3	-	303	3	FSM	ENSMUSG00000078784.9	ENSMUST00000185423.2	278	3	-21	-4	10	0	multi-exon	TRUE	canonical	3	25	junction_1	2412	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTTCTTTAAATCTTG	NA	False	NA	-5	True	AATAAA	-18	NA	14676335	14671348	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_14671469_14674600_14674718_14676269
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078963	chr3	-	539	5	NNC	ENSMUSG00000078784.9	novel	435	4	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	2523.17819178511	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTTCTTTAAATCTTG	NA	False	NA	-5	True	AATAAA	-18	NA	14676328	14671348	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_14671469_14672009_14672136_14672236_14672354_14674600_14674718_14676269
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078984	chr3	+	803	1	NIC	ENSMUSG00000027562.13	novel	1788	7	NA	NA	13329	0	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGTGCCTGATTGTCT	NA	False	NA	11	True	AATAAA	-14	NA	14965027	14965830	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_+_14965000_14965800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078989	chr3	+	1452	1	Intergenic	novelGene_265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGCACAGGCATGGAACT	NA	False	NA	NA	False	AATAAA	-42	NA	15685325	15686777	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr3_+_15685300_15686800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000078995	chr3	+	362	1	ISM	ENSMUSG00000047213.15	ENSMUST00000108345.9	5102	5	32781	683	32757	-501	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTATTGGTCCTGTGAT	NA	False	NA	NA	False	AATAAA	-24	NA	16270156	16270518	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_16270200_16270500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079002	chr3	-	2953	7	FSM	ENSMUSG00000027599.10	ENSMUST00000029125.10	3673	7	-19	739	-19	-739	multi-exon	TRUE	canonical	3	251	junction_6	16.1761140780679	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTGTATTTTTAAATTT	NA	False	NA	-3	True	AATAAA	-23	NA	19217248	19186304	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_19188388_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19217073
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079010	chr3	-	1160	7	NNC	ENSMUSG00000027599.10	novel	3673	7	NA	NA	-14	-2509	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	91.40280204798	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTATGTATGCTGCATTT	NA	False	NA	NA	False	AATAAA	-27	NA	19217243	19188074	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_19188370_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19217073
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079028	chr3	+	275	2	Intergenic	novelGene_266	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTAATATAATCACATGC	7667	False	NA	NA	False	NA	NA	NA	19965015	19965893	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr3_+_19965072_19965674
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079047	chr3	+	539	2	ISM	ENSMUSG00000027630.14	ENSMUST00000201467.2	354	4	6342	-280	6342	280	3prime_fragment	FALSE	canonical	3	224	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCGGCAGTAGTTGGTT	NA	False	NA	17	True	NA	NA	NA	22263697	22265023	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_22263778_22264564
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079055	chr3	-	421	2	Genic_Genomic	ENSMUSG00000102987.2	novel	411	3	NA	NA	-59	-8424	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGATTTGGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	22352053	22347668	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr3_-_22347845_22351808
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079078	chr3	-	178	1	Intergenic	novelGene_267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATTTGTTTTAAAAGC	1903	False	NA	-6	True	NA	NA	NA	27256819	27256641	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr3_-_27256600_27256800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079082	chr3	-	2374	3	ISM	ENSMUSG00000039286.13	ENSMUST00000195008.6	6886	27	281462	1268	281462	-1268	3prime_fragment	FALSE	canonical	3	85	junction_2	14.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATTACCAGTGATTGAAA	NA	False	NA	NA	False	ATTAAA	-19	NA	27483085	27471578	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_27473752_27480182_27480311_27483012
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079131	chr3	+	515	4	NNC	ENSMUSG00000039221.11	novel	552	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	3389.77976996868	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATGGTTCATCAGTGT	NA	False	NA	17	True	AATAAA	-22	NA	28859655	28861571	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_28859693_28860648_28860742_28860858_28861008_28861335
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079162	chr3	+	481	4	NNC	ENSMUSG00000039221.11	novel	552	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	3389.45121746214	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATGGTTCATCAGTGT	NA	False	NA	17	True	AATAAA	-22	NA	28859656	28861571	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_28859693_28860648_28860742_28860891_28861008_28861335
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079184	chr3	+	544	4	NNC	ENSMUSG00000039221.11	novel	552	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3666.00490998035	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATGGTTCATCAGTGT	NA	False	NA	17	True	AATAAA	-22	NA	28859659	28861571	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_28859693_28860655_28860742_28860818_28861008_28861335
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079218	chr3	+	197	1	Intergenic	novelGene_268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCCCCTTCCTTAGAT	NA	False	NA	3	True	NA	NA	NA	30676587	30676784	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr3_+_30676600_30676800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079222	chr3	-	1897	11	FSM	ENSMUSG00000027702.8	ENSMUST00000029252.8	1891	11	-2	-4	-2	4	multi-exon	TRUE	canonical	3	297	junction_6	40.0710618776194	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTGAGTTTAGATATCC	NA	False	NA	-14	True	AATAAA	-23	NA	30702020	30678411	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_30679052_30684121_30684249_30685430_30685587_30685941_30686097_30688693_30688790_30690390_30690520_30696887_30696972_30697432_30697498_30697596_30697719_30699343_30699465_30701818
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079235	chr3	-	1785	11	NNC	ENSMUSG00000027702.8	novel	1891	11	NA	NA	110	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	118.294378564664	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGTCTTGAGTTTAGAT	NA	False	NA	-18	True	AATAAA	-19	NA	30701908	30678415	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_30679052_30684121_30684249_30685430_30685587_30685941_30686097_30688693_30688790_30690390_30690520_30696883_30696972_30697432_30697498_30697596_30697719_30699343_30699465_30701818
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079251	chr3	+	560	3	NNC	ENSMUSG00000027703.17	novel	2387	8	NA	NA	10504	3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	26	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGTGGGAAGAATGATA	NA	False	NA	8	True	NA	NA	NA	30712538	30726583	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_30712608_30714049_30714247_30726289
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079259	chr3	-	1770	9	FSM	ENSMUSG00000074653.11	ENSMUST00000126658.8	1586	9	-35	-149	-22	149	multi-exon	FALSE	canonical	3	40	junction_7	9.37333318515884	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGCTCATGATACCTTT	NA	False	NA	-5	True	NA	NA	NA	30754014	30733057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_30733533_30735094_30735263_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745450_30749635_30749780_30753847
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079265	chr3	-	257	1	FSM	ENSMUSG00000074653.11	ENSMUST00000194840.2	1822	1	1396	169	1396	6	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTCAGTTTGTATCTA	NA	False	NA	-1	True	AGTAAA	-26	NA	30752521	30752264	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_30752300_30752500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079287	chr3	+	428	4	NNC	ENSMUSG00000027706.9	novel	639	3	NA	NA	0	8455	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	383.374780368013	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATGGTGAAAAGGAAGA	NA	False	NA	91	True	AAAAAG	-16	NA	30847484	30864145	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_30847533_30854279_30854389_30855208_30855315_30863980
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079317	chr3	-	978	3	ISM	ENSMUSG00000037652.16	ENSMUST00000099163.5	2808	9	10	31980	0	-2714	5prime_fragment	FALSE	canonical	3	8	junction_2	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTAAATTAATATT	NA	False	NA	NA	False	NA	NA	NA	31023554	31015249	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_31016033_31019921_31020085_31023522
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079321	chr3	+	191	1	Intergenic	novelGene_269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATAACACTTTGACCTG	NA	False	NA	NA	False	NA	NA	NA	31088783	31088974	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr3_+_31088800_31089000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079370	chr3	+	1850	14	NNC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	-89	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	384.437574283147	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGTCTGTGTGACT	NA	False	NA	28	True	AATAAA	-25	NA	32762824	32781127	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779487_32780670
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079401	chr3	-	867	7	NNC	ENSMUSG00000037531.9	novel	3364	7	NA	NA	391	78	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	271.253520202452	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGTTGTTCTTCTAGCT	NA	False	NA	-11	True	TATAAA	-21	NA	32790905	32781645	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256_32788403_32790790
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079405	chr3	-	874	7	NNC	ENSMUSG00000037531.9	novel	3364	7	NA	NA	391	78	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	272.735168656743	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGTTGTTCTTCTAGCT	NA	False	NA	-11	True	TATAAA	-21	NA	32790905	32781645	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256_32788403_32790783
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079418	chr3	+	679	6	NNC	ENSMUSG00000027673.13	novel	1079	6	NA	NA	-17	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1169.5201409125	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGTGGCTGGTTCTTC	NA	False	NA	29	True	AATAAA	-31	NA	32791202	32805385	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_32791355_32799002_32799092_32800596_32800664_32801882_32801939_32802609_32802717_32805177
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079462	chr3	+	666	6	NNC	ENSMUSG00000027673.13	novel	1079	6	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_5	1152.44012425809	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTCTGTGGCTGGT	NA	False	NA	24	True	AATAAA	-26	NA	32791210	32805380	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_32791355_32799002_32799092_32800596_32800664_32801876_32801939_32802609_32802711_32805177
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079464	chr3	+	676	6	NNC	ENSMUSG00000027673.13	novel	1079	6	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1154.1754805921	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTCTGTGGCTGGT	NA	False	NA	24	True	AATAAA	-26	NA	32791210	32805380	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_32791355_32799002_32799096_32800596_32800664_32801876_32801939_32802609_32802717_32805177
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079481	chr3	+	545	1	NIC	ENSMUSG00000027673.13	novel	1079	6	NA	NA	6266	0	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTGCTTTACTTTTGG	NA	False	NA	10	True	AATAAA	-24	NA	32805170	32805715	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_+_32805200_32805700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079484	chr3	-	464	1	Intergenic	novelGene_270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	382	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAGATATATACATACACA	NA	False	NA	NA	False	ATTAAA	-19	NA	32918762	32918298	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr3_-_32918300_32918800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079493	chr3	+	2785	17	FSM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	-29	-627	-19	-350	multi-exon	FALSE	canonical	3	754	junction_15	164.164884719601	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGATTTTTAACTTTC	4830	False	NA	10	True	AATAAA	-14	NA	34074227	34124121	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079505	chr3	+	2052	16	NNC	ENSMUSG00000027680.16	novel	3014	16	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	344.7483075456	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGTTATTTTGTTTTC	4843	False	NA	15	True	ATTAAA	-18	NA	34074240	34123489	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100739_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079506	chr3	+	2221	18	NIC	ENSMUSG00000027680.16	novel	2459	17	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	3	36	junction_15	384.426270035524	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGTTATTTTGTTTTC	4843	False	NA	15	True	ATTAAA	-18	NA	34074240	34123489	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34119122_34119204_34122309_34122402_34123065
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079544	chr3	-	735	6	FSM	ENSMUSG00000027679.14	ENSMUST00000108195.10	659	6	-47	-29	-47	29	multi-exon	FALSE	canonical	3	3089	junction_3	262.703330774469	10776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCACTTGTTATTTTTC	NA	False	NA	NA	False	TATAAA	-30	NA	34135517	34131398	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_34131674_34132923_34132995_34133353_34133434_34134232_34134307_34134379_34134432_34135334
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079552	chr3	-	576	6	NNC	ENSMUSG00000027679.14	novel	659	6	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1373.09947199757	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTCTTGGTATATTTT	NA	False	NA	0	True	NA	NA	NA	34135464	34131498	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_34131674_34132923_34132995_34133353_34133434_34134232_34134307_34134379_34134422_34135330
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079556	chr3	-	575	6	NNC	ENSMUSG00000027679.14	novel	659	6	NA	NA	-1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1342.47398485036	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTCTTGGTATATTTT	NA	False	NA	0	True	NA	NA	NA	34135462	34131498	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_34131674_34132923_34132995_34133358_34133434_34134232_34134307_34134379_34134432_34135334
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079569	chr3	-	532	5	FSM	ENSMUSG00000027679.14	ENSMUST00000120805.8	551	5	-7	26	4	4	multi-exon	FALSE	canonical	3	109	junction_4	1441.31155549381	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTCTTGGTATATTTT	NA	False	NA	0	True	NA	NA	NA	34135466	34131498	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_34131674_34132923_34132995_34133353_34133434_34134232_34134307_34135334
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079570	chr3	-	575	6	NNC	ENSMUSG00000027679.14	novel	659	6	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1342.47398485036	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTCTTGGTATATTTT	NA	False	NA	0	True	NA	NA	NA	34135464	34131498	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_34131674_34132923_34132995_34133360_34133434_34134232_34134307_34134379_34134432_34135334
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079576	chr3	-	584	6	NNC	ENSMUSG00000027679.14	novel	659	6	NA	NA	-1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1373.09947199757	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTCTTGGTATATTTT	NA	False	NA	0	True	NA	NA	NA	34135462	34131498	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_34131674_34132923_34132995_34133353_34133434_34134232_34134307_34134379_34134432_34135330
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079589	chr3	-	177	1	NIC	ENSMUSG00000027679.14	novel	659	6	NA	NA	2654	4	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTCTTGGTATATTTT	NA	False	NA	0	True	NA	NA	NA	34131675	34131498	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_-_34131500_34131700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079648	chr3	+	1594	12	NNC	ENSMUSG00000027714.12	novel	1617	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	140.387127096987	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGAGAGCCGAATGAGT	NA	False	NA	15	True	AATAAA	-23	NA	36606775	36619876	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_36606901_36607183_36607279_36607954_36608075_36608188_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166_36616312_36617221_36617407_36619366_36619446_36619577
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079656	chr3	-	1271	1	ISM	ENSMUSG00000027715.10	ENSMUST00000029270.10	2965	8	6015	0	710	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTTGGTGGGCTGTGTG	NA	False	NA	-7	True	AATAAA	-21	NA	36620284	36619013	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_36619000_36620300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079666	chr3	-	2597	19	FSM	ENSMUSG00000037325.11	ENSMUST00000108156.9	2687	19	88	2	0	-2	multi-exon	FALSE	canonical	3	20	junction_12	6.84754619472471	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTTGTGTCTTTATATA	NA	False	NA	NA	False	ATTAAA	-19	NA	36667538	36627292	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_36627772_36629442_36629567_36629693_36629798_36629891_36630002_36632544_36632710_36636774_36636915_36644800_36644867_36646513_36646589_36648516_36648710_36652414_36652518_36653487_36653573_36656977_36657109_36658554_36658672_36659832_36659906_36661669_36661857_36664328_36664505_36664714_36664778_36666160_36666227_36667398
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079685	chr3	-	531	1	ISM	ENSMUSG00000045031.19	ENSMUST00000071400.13	1808	4	3292	875	3266	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGTATCTTCTGGTA	NA	False	NA	NA	False	AATAAA	-19	NA	37363303	37362772	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_37362800_37363300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079698	chr3	+	2904	16	FSM	ENSMUSG00000027722.15	ENSMUST00000108112.10	3295	16	391	0	-11	0	multi-exon	FALSE	canonical	3	324	junction_1	47.7393850912314	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTTTATCTTGTGCTT	NA	False	NA	11	True	AATAAA	-20	NA	37474435	37633245	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079713	chr3	+	369	2	Genic_Genomic	ENSMUSG00000100755.2	novel	425	1	NA	NA	-33	69	multi-exon	FALSE	canonical	0	0	junction_1	0	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGAATAGGATTGTGATG	7631	False	NA	NA	False	AATAAA	-35	NA	37768855	37769382	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr3_+_37768897_37769054
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079717	chr3	+	377	2	Genic_Genomic	ENSMUSG00000100755.2	novel	425	1	NA	NA	-30	64	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGTGGAATAGGATTG	7634	False	NA	NA	False	AATAAA	-30	NA	37768858	37769377	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr3_+_37768966_37769107
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079724	chr3	-	529	2	NNC	ENSMUSG00000058174.8	novel	1098	2	NA	NA	-10673	-384	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCACCATGTCTTATGTG	NA	False	NA	NA	False	NA	NA	NA	37789312	37768858	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_37769359_37789283
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079737	chr3	+	480	2	Genic_Genomic	ENSMUSG00000100755.2	novel	425	1	NA	NA	-29	64	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGTGGAATAGGATTG	7635	False	NA	NA	False	AATAAA	-30	NA	37768859	37769377	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr3_+_37769051_37769088
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079752	chr3	-	518	1	NIC	ENSMUSG00000058174.8	novel	1265	3	NA	NA	9100	-386	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCCACCATGTCTTATG	NA	False	NA	NA	False	NA	NA	NA	37769378	37768860	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_-_37768900_37769400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079763	chr3	+	764	1	NIC	ENSMUSG00000060798.8	novel	6387	16	NA	NA	13368	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGCACTTGAGAACACC	NA	False	NA	2	True	AATAAA	-18	NA	40608283	40609047	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_+_40608300_40609000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079768	chr3	+	612	1	ISM	ENSMUSG00000069041.9	ENSMUST00000091184.9	2128	6	16128	503	16128	-503	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAATGAGCCTTTTTCCC	NA	False	NA	NA	False	AATAAA	-16	NA	40679412	40680024	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_40679400_40680000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079782	chr3	+	1537	7	ISM	ENSMUSG00000025762.17	ENSMUST00000191805.7	1705	10	13336	-4	2335	4	3prime_fragment	FALSE	canonical	3	71	junction_1	8.71779788708135	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTAAGGGCTTTTCT	NA	False	NA	17	True	AATAAA	-30	NA	40918401	40932232	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079806	chr3	-	1118	5	Fusion	ENSMUSG00000097639.3_ENSMUSG00000105260.2	novel	504	2	NA	NA	-7	1	multi-exon	FALSE	canonical	2	6	junction_4	31.9482002622996	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGCTCTCCTTCGTGTT	NA	False	NA	-9	True	AGTAAA	-17	NA	41447634	41432010	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr3_-_41432228_41436231_41436380_41436506_41436880_41437302_41437571_41447522
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079820	chr3	-	660	2	NNC	ENSMUSG00000097639.3	novel	2161	2	NA	NA	-42	-1424	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_1	0	2333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCCGTACACTTTCTTA	NA	False	NA	NA	False	TTTAAA	-19	NA	41447669	41439882	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_41440396_41447522
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079825	chr3	-	515	1	Antisense	novelGene_ENSMUSG00000104616.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCCGTACACTTTCTTA	NA	False	NA	NA	False	TTTAAA	-19	NA	41440397	41439882	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr3_-_41439900_41440400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079842	chr3	-	328	1	ISM	ENSMUSG00000097639.3	ENSMUST00000199155.2	2161	2	4122	1062	-592	63	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTGTCAATTTTTAAA	NA	False	NA	60	True	NA	NA	NA	41443503	41443175	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_41443200_41443500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079849	chr3	-	1059	2	FSM	ENSMUSG00000097639.3	ENSMUST00000181833.2	986	2	-10	-63	-10	63	multi-exon	FALSE	canonical	2	4	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTGTCAATTTTTAAA	NA	False	NA	60	True	NA	NA	NA	41447637	41443175	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_41444172_41447574
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079881	chr3	+	2876	11	FSM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	1	2604	1	202	multi-exon	FALSE	canonical	3	683	junction_7	54.3710400856927	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACAAATGAAGTAACTTT	NA	False	NA	NA	False	TATAAA	-8	NA	41510166	41568695	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079906	chr3	-	808	1	ISM	ENSMUSG00000037174.19	ENSMUST00000194641.6	5919	10	84626	2510	4204	0	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	False	NA	-6	True	AATATA	-14	NA	51163458	51162650	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_51162600_51163500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079916	chr3	+	187	1	Intergenic	novelGene_271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTCTCTCCTCTTAGAG	NA	False	NA	NA	False	NA	NA	NA	51262576	51262763	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr3_+_51262600_51262800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079927	chr3	-	1407	4	NNC	ENSMUSG00000037161.15	novel	1409	4	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	91.1604202613295	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTAGTCTTTCTTGTT	NA	False	NA	0	True	AATAAA	-17	NA	51303941	51295832	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_51296745_51298646_51298741_51299245_51299350_51303644
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000079998	chr3	+	199	1	Intergenic	novelGene_272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTAAAAACATTTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	51509817	51510016	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr3_+_51509800_51510000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080008	chr3	-	220	1	ISM	ENSMUSG00000027742.14	ENSMUST00000036665.10	3182	19	34896	247	12344	0	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGTAGTATTTTTATA	NA	False	NA	-1	True	ATTAAA	-18	NA	52889762	52889542	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_52889500_52889800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080012	chr3	-	451	2	Antisense	novelGene_ENSMUSG00000048332.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	53026128	53020955	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr3_-_53021169_53025890
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080017	chr3	-	581	1	FSM	ENSMUSG00000105879.2	ENSMUST00000198872.2	457	1	-40	-84	-40	84	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACCAAATAGAAGAGTCAAT	NA	False	NA	NA	False	NA	NA	NA	53600339	53599758	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_53599800_53600300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080025	chr3	-	2022	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	-2	2870	-2	1576	multi-exon	FALSE	canonical	3	324	junction_3	16.7737890770094	1419	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTGTCAGTAATGTTT	NA	False	NA	0	True	ATTAAA	-28	NA	53771253	53763666	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080045	chr3	+	1208	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	-25	17	multi-exon	FALSE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAACATGCTTAGTCAT	5415	False	NA	NA	False	NA	NA	NA	54388833	54390363	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr3_+_54389551_54389872
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080048	chr3	+	1531	1	FSM	ENSMUSG00000069014.5	ENSMUST00000091130.5	1488	1	-25	-18	-25	18	mono-exon	FALSE	NA	NA	NA	NA	NA	484	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAACATGCTTAGTCATC	5415	False	NA	NA	False	NA	NA	NA	54388833	54390364	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_54388800_54390400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080093	chr3	-	952	11	NNC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	642.190127610196	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGTCCTTACGTTGTT	NA	False	NA	-12	True	AATAAA	-27	NA	54642469	54636098	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_54636308_54636610_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080100	chr3	-	939	11	NNC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	645.988924053656	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGTCCTTACGTTGTT	NA	False	NA	-12	True	AATAAA	-27	NA	54642467	54636098	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_54636315_54636614_54636708_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080104	chr3	-	949	10	NNC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	677.23945835326	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGTCCTTACGTTGTT	NA	False	NA	-12	True	AATAAA	-27	NA	54642469	54636098	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639492_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080106	chr3	-	959	11	NNC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	642.190127610196	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGTCCTTACGTTGTT	NA	False	NA	-12	True	AATAAA	-27	NA	54642469	54636098	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_54636315_54636610_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080108	chr3	-	949	10	NNC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	671.485583530197	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGTCCTTACGTTGTT	NA	False	NA	-12	True	AATAAA	-27	NA	54642469	54636098	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54642397
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080109	chr3	-	948	11	NNC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	642.978693270625	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGTCCTTACGTTGTT	NA	False	NA	-12	True	AATAAA	-27	NA	54642469	54636098	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639441_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080111	chr3	-	952	11	NNC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_9	636.546808962232	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGTCCTTACGTTGTT	NA	False	NA	-12	True	AATAAA	-27	NA	54642469	54636098	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641585_54641716_54641754_54642428
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080114	chr3	-	909	10	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	671.208197539664	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGTCCTTACGTTGTT	NA	False	NA	-12	True	AATAAA	-27	NA	54642469	54636098	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080123	chr3	-	950	11	NNC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_3	632.526118037825	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGTCCTTACGTTGTT	NA	False	NA	-12	True	AATAAA	-27	NA	54642469	54636098	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_54636315_54636614_54636722_54637185_54637302_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080243	chr3	-	344	1	ISM	ENSMUSG00000036513.16	ENSMUST00000160959.8	2992	5	5019	2004	5012	6	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAGACAGTTCAATATT	893	False	NA	-5	True	AATAAA	-25	NA	57554117	57553773	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_57553800_57554100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080277	chr3	+	1088	1	ISM	ENSMUSG00000036503.14	ENSMUST00000041826.14	2678	10	97682	400	32939	-288	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTATTGTTCTGGTGAA	5072	False	NA	22	True	AATAAA	-22	NA	57741164	57742252	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_57741200_57742300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080350	chr3	+	971	9	ISM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	114	41481	114	-4477	5prime_fragment	FALSE	canonical	3	117	junction_1	104.818593293366	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCCAATGTAACACATATT	NA	False	NA	NA	False	AATAAA	-23	NA	63203629	63247563	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080357	chr3	-	314	2	Intergenic	novelGene_273	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATGAAACAAAAAGCTTT	NA	False	NA	NA	False	NA	NA	NA	63424113	63423740	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr3_-_63424026_63424084
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080387	chr3	-	2280	1	ISM	ENSMUSG00000027828.13	ENSMUST00000029414.12	2957	5	10688	1	1446	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTTTTCTGTAATTC	6556	False	NA	-2	True	ATTAAA	-19	NA	65289356	65287076	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_65287100_65289400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080389	chr3	-	2946	5	FSM	ENSMUSG00000027828.13	ENSMUST00000029414.12	2957	5	9	2	9	-2	multi-exon	FALSE	canonical	3	545	junction_4	56.4225132371822	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTTTTTCTGTAATT	2725	False	NA	-3	True	ATTAAA	-18	NA	65300035	65287077	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_65289456_65290412_65290545_65295152_65295252_65298745_65298873_65299825
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080429	chr3	+	633	1	ISM	ENSMUSG00000027774.17	ENSMUST00000077271.9	4078	18	45801	0	19418	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTTCTTCCTGCTTCA	9050	False	NA	11	True	ATTAAA	-25	NA	67383229	67383862	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_67383200_67383900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080467	chr3	+	1320	2	Antisense	novelGene_ENSMUSG00000090941.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTCACCTTTACAAAAAGA	4925	False	NA	NA	False	NA	NA	NA	69227344	69243128	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr3_+_69228027_69242490
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080470	chr3	+	1345	2	Antisense	novelGene_ENSMUSG00000090941.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTCACCTTTACAAAAAGA	4925	False	NA	NA	False	NA	NA	NA	69227344	69243128	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr3_+_69228084_69242522
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080505	chr3	+	632	5	NNC	ENSMUSG00000027787.15	novel	9135	16	NA	NA	-2919	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	516.759796714102	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTGTGAAGGTTTCATAA	NA	False	NA	16	True	AATAAA	-26	NA	69650845	69656380	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_69650954_69652545_69652616_69654061_69654169_69655630_69655702_69656104
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080515	chr3	-	721	5	NNC	ENSMUSG00000034151.14	novel	2467	17	NA	NA	76410	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	1.92028643696715	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGCAAGTATTGGAGAG	NA	False	NA	0	True	AATAAA	-21	NA	74974600	74945213	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_74945397_74947190_74947327_74959679_74959938_74968839_74968963_74974579
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080534	chr3	+	1596	9	FSM	ENSMUSG00000027834.16	ENSMUST00000029423.9	4091	9	-2	2497	-2	-2497	multi-exon	FALSE	canonical	3	8	junction_2	2.1650635094611	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTTTTTCATTTTGAA	NA	False	NA	NA	False	AATAAA	-22	NA	75464851	75548305	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_75464950_75520386_75520655_75521760_75521992_75523874_75524070_75526425_75526631_75531165_75531264_75545224_75545312_75547555_75547646_75547981
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080540	chr3	-	965	4	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-59	5	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	82.6411250864577	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGGTCATGGTGTTTCT	NA	False	NA	0	True	NA	NA	NA	75563097	75554747	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_75555246_75556106_75556298_75562696_75562869_75562993
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080547	chr3	-	1072	1	FSM	ENSMUSG00000099370.2	ENSMUST00000191479.2	818	1	145	-399	145	5	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGGTCATGGTGTTTCT	1112	False	NA	0	True	NA	NA	NA	75555819	75554747	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_75554700_75555800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080587	chr3	+	196	1	Intergenic	novelGene_274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTAGAGCTAATTGGACA	NA	False	NA	NA	False	NA	NA	NA	79320219	79320415	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr3_+_79320200_79320400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080648	chr3	+	1773	15	NNC	ENSMUSG00000027998.12	novel	1851	15	NA	NA	2	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	194.098544296342	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGTTTTATTTCTGAAA	NA	False	NA	27	True	AATAAA	-19	NA	82962840	82979599	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_82962962_82964080_82964185_82965962_82966106_82966633_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977903_82978044_82978496_82978691_82979417
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080658	chr3	+	208	1	Intergenic	novelGene_275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAAACTGTGAGTTAGTG	NA	False	NA	NA	False	NA	NA	NA	83737583	83737791	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr3_+_83737600_83737800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080662	chr3	-	1168	1	ISM	ENSMUSG00000027995.11	ENSMUST00000029623.11	3014	3	4328	0	4328	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGGTTTCTCTGTTTTTC	NA	False	NA	-1	True	TATAAA	-16	NA	83744746	83743578	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_83743600_83744700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080663	chr3	-	845	5	ISM	ENSMUSG00000033767.15	ENSMUST00000052342.9	4815	34	135060	-4	2464	4	3prime_fragment	FALSE	canonical	3	75	junction_3	14.1155942134931	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTATTTTTGCTTT	NA	False	NA	-22	True	AATAAA	-18	NA	83812422	83805511	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080674	chr3	-	955	9	NNC	ENSMUSG00000033752.8	novel	875	8	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	93.5277365277274	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTCTCCTCTTTTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	84063031	83995239	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_83995482_84000861_84000907_84012241_84012357_84023733_84023809_84041324_84041474_84045475_84045534_84049005_84049072_84049162_84049305_84062968
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080677	chr3	-	806	8	NNC	ENSMUSG00000033752.8	novel	875	8	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	79.0546181640341	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTCTCCTCTTTTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	84063031	83995239	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_83995482_84000861_84000907_84012241_84012357_84023733_84023802_84041324_84041474_84045475_84045534_84049005_84049072_84062968
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080689	chr3	-	461	1	ISM	ENSMUSG00000027993.17	ENSMUST00000107692.8	7161	12	143910	0	29624	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGAGTGTTTATTCAACA	NA	False	NA	-19	True	AATAAA	-21	NA	84068206	84067745	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_84067700_84068200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080709	chr3	+	485	1	FSM	ENSMUSG00000044330.9	ENSMUST00000054148.9	288	1	-76	-121	-76	121	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCAAGCTAATCACCAACA	NA	False	NA	NA	False	AATAAA	-45	NA	85823013	85823498	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_85823000_85823500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080716	chr3	+	205	1	FSM	ENSMUSG00000028082.15	ENSMUST00000183202.2	3782	1	2944	633	2944	-633	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGACTACACTGCATTG	NA	False	NA	12	True	AATAAA	-26	NA	86035579	86035784	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_86035600_86035800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080731	chr3	-	962	6	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	canonical	3	141	junction_5	3461.18421353155	672	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGTCCATTGATTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	86049995	86045245	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86049004_86049109_86049816
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080743	chr3	-	935	6	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	46	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3910.13807428843	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTCCATTGATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	86049963	86045246	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86049000_86049109_86049814
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080776	chr3	-	858	6	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	106	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3839.11278292264	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGCTTCTGTCCATTG	NA	False	NA	NA	False	AATAAA	-16	NA	86049903	86045251	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_86045418_86045789_86045892_86046346_86046556_86048545_86048734_86049004_86049109_86049814
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080781	chr3	-	1313	5	NIC	ENSMUSG00000028081.7	novel	977	6	NA	NA	106	-5	intron_retention	FALSE	canonical	3	6820	junction_1	1471.06398569199	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGCTTCTGTCCATTG	NA	False	NA	NA	False	AATAAA	-16	NA	86049903	86045251	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_-_86045418_86045789_86046556_86048545_86048734_86049004_86049109_86049814
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080815	chr3	-	522	1	FSM	ENSMUSG00000094392.2	ENSMUST00000119949.3	136	1	-78	-308	-78	308	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACAAGTGACCAAAGAGCA	NA	False	NA	NA	False	NA	NA	NA	86579553	86579031	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_86579000_86579600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080834	chr3	+	314	1	Genic_Genomic	ENSMUSG00000041750.14	novel	NA	NA	NA	NA	2967	86	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGTTACTTGTCTTT	NA	False	NA	88	True	NA	NA	NA	86896859	86897173	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr3_+_86896900_86897200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080868	chr3	+	966	1	ISM	ENSMUSG00000004897.17	ENSMUST00000005017.15	2245	6	8846	0	1206	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGACTAATTCTTTTCAA	NA	False	NA	25	True	AATAAA	-21	NA	87822473	87823439	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_87822500_87823400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080888	chr3	+	1183	6	NNC	ENSMUSG00000019710.14	novel	1226	6	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	437.291024376216	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGTCTTAAAAGCTTTA	NA	False	NA	21	True	AATAAA	-23	NA	87826842	87830974	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_87827013_87829123_87829356_87829437_87829534_87829694_87829791_87830241_87830373_87830516
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080900	chr3	+	983	6	NNC	ENSMUSG00000019710.14	novel	1339	6	NA	NA	8	-228	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	402.013233613024	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTTGTCCACACTACCCC	NA	False	NA	37	True	AATAAA	-15	NA	87826850	87830741	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_87827046_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080918	chr3	+	949	1	Genic_Genomic	ENSMUSG00000048039.9	novel	NA	NA	NA	NA	9429	5	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGTGTGTGCTTTCA	14	True	NA	36	True	NA	NA	NA	87847049	87847998	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr3_+_87847000_87848000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080928	chr3	+	1759	9	FSM	ENSMUSG00000028069.17	ENSMUST00000166021.8	1768	9	9	0	-7	0	multi-exon	FALSE	canonical	3	12	junction_2	81.6783898898601	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTGTTTTGTTTTTGA	1728	False	NA	39	True	TTTAAA	-28	NA	87950423	87963300	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_87950487_87950773_87950909_87958468_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080945	chr3	-	789	5	NIC	ENSMUSG00000028070.8	novel	908	6	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	3	75	junction_1	350.462908165757	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTCTTCTGGCCTTAA	NA	False	NA	-4	True	AATAAA	-25	NA	87965831	87963826	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_-_87964084_87965030_87965145_87965227_87965339_87965436_87965546_87965633
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080951	chr3	-	1604	4	NIC	ENSMUSG00000028070.8	novel	908	6	NA	NA	-23	0	intron_retention	FALSE	canonical	3	860	junction_3	34.2669260690571	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTCTTCTGGCCTTAA	NA	False	NA	-4	True	AATAAA	-25	NA	87965825	87963826	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_-_87964084_87964292_87965339_87965436_87965546_87965633
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080953	chr3	-	951	6	NNC	ENSMUSG00000028070.8	novel	908	6	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_1	327.592796013588	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTCTTCTGGCCTTAA	NA	False	NA	-4	True	AATAAA	-25	NA	87965831	87963826	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_87964084_87964278_87964441_87965030_87965145_87965227_87965339_87965436_87965546_87965633
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080965	chr3	-	928	6	NNC	ENSMUSG00000028070.8	novel	908	6	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	356.676099563736	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTCTTCTGGCCTTAA	NA	False	NA	-4	True	AATAAA	-25	NA	87965831	87963826	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_87964084_87964292_87964441_87965030_87965145_87965227_87965339_87965436_87965546_87965642
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080966	chr3	-	932	6	NNC	ENSMUSG00000028070.8	novel	908	6	NA	NA	-20	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	358.285696058327	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTCTTCTGGCCTTAA	NA	False	NA	-4	True	AATAAA	-25	NA	87965822	87963826	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_87964084_87964292_87964441_87965030_87965145_87965223_87965339_87965436_87965546_87965633
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000080967	chr3	-	1016	5	ISM	ENSMUSG00000028070.8	ENSMUST00000029708.8	908	6	-20	0	-20	0	intron_retention	FALSE	canonical	3	839	junction_3	36.2422405488402	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTCTTCTGGCCTTAA	NA	False	NA	-4	True	AATAAA	-25	NA	87965822	87963826	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_87964084_87964292_87964441_87965030_87965145_87965227_87965339_87965436
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081024	chr3	+	1963	14	NNC	ENSMUSG00000001416.14	novel	1977	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	689.758245960005	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTGTCATGTGTTTTT	3811	False	NA	23	True	ATTAAA	-15	NA	88204429	88229074	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227773_88228013_88228320_88228453_88228750
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081053	chr3	+	280	1	FSM	ENSMUSG00000001418.14	ENSMUST00000193646.2	4457	1	3346	831	328	99	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGAGTCTTTTGTTTGT	7373	False	NA	16	True	TTTAAA	-26	NA	88235707	88235987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_88235700_88236000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081055	chr3	-	2005	4	FSM	ENSMUSG00000001420.14	ENSMUST00000001456.11	2406	4	12	389	12	2	multi-exon	FALSE	canonical	3	8	junction_3	5.18544972870135	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGCTCGTTCATTCT	NA	False	NA	NA	False	AATAAA	-13	NA	88241799	88236350	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_88237240_88239746_88239961_88240198_88240990_88241688
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081060	chr3	-	1453	1	Genic_Genomic	ENSMUSG00000001420.14	novel	NA	NA	NA	NA	-43	-1601	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCAGTGTCATCTTTTAG	NA	False	NA	NA	False	AATAAA	-20	NA	88243498	88242045	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr3_-_88242000_88243500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081062	chr3	+	1199	5	ISM	ENSMUSG00000001415.11	ENSMUST00000192057.6	3119	12	-51	6786	0	-1653	5prime_fragment	FALSE	canonical	3	289	junction_3	7.49583217528247	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCTCAGAGATGCATGGT	NA	False	NA	NA	False	AAAAAG	-3	NA	88243566	88253250	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081066	chr3	+	1074	1	ISM	ENSMUSG00000001415.11	ENSMUST00000001451.11	4448	22	25005	0	729	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88268571	88269645	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_88268600_88269600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081115	chr3	-	1084	5	FSM	ENSMUSG00000008601.13	ENSMUST00000008745.13	1081	5	-2	-1	-2	1	multi-exon	TRUE	canonical	1	1	junction_4	5.2618912949623	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCCTTCCATCTGT	5699	False	NA	1	True	AATAAA	-25	NA	88455609	88449334	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_88449678_88450007_88450089_88450626_88450821_88452367_88452564_88455339
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081162	chr3	-	188	1	NIC	ENSMUSG00000028062.16	novel	585	2	NA	NA	1088	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTCACCTGCTTTC	3995	False	NA	-6	True	AATAAA	-14	NA	88457313	88457125	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_-_88457100_88457300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081168	chr3	-	492	2	ISM	ENSMUSG00000028062.16	ENSMUST00000119002.2	568	4	-74	2410	-40	0	5prime_fragment	FALSE	canonical	3	112	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGAGTACGGTGCTGGCC	1068	False	NA	NA	False	AATAAA	-22	NA	88460240	88459536	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_88459825_88460036
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081182	chr3	+	1403	8	NIC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-111	1	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	2280.3080618949	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTCTTGCGTCAAC	NA	False	NA	16	True	AATAAA	-18	NA	88483071	88495727	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_+_88483288_88483806_88483911_88484401_88484504_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081206	chr3	+	2163	6	FSM	ENSMUSG00000041355.14	ENSMUST00000195014.6	1059	6	-1097	-7	-1097	7	multi-exon	FALSE	canonical	3	3697	junction_1	473.044775893361	10970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTGCGTCAACAGACAA	2460	False	NA	22	True	AATAAA	-24	NA	88485817	88495733	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_88486994_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081211	chr3	+	1067	6	NNC	ENSMUSG00000041355.14	novel	1059	6	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	1868.97280879097	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTCTTGCGTCAAC	3544	False	NA	16	True	AATAAA	-18	NA	88486901	88495727	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_88486994_88487186_88487342_88488280_88488380_88491089_88491193_88494171_88494250_88495187
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081249	chr3	+	1154	5	NNC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	26	-3	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	2089.32529480213	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGATGTGTTTGTCTTGCGT	3646	False	NA	12	True	AATAAA	-14	NA	88487003	88495723	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_88487342_88488280_88488380_88491089_88491193_88494171_88494250_88495187
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081258	chr3	+	927	4	ISM	ENSMUSG00000041355.14	ENSMUST00000035785.9	1189	5	1202	-1	1202	1	3prime_fragment	FALSE	canonical	3	4285	junction_1	307.372014919308	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTCTTGCGTCAAC	4822	False	NA	16	True	AATAAA	-18	NA	88488179	88495727	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_88488380_88491083_88491193_88494171_88494250_88495187
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081262	chr3	+	540	1	Genic_Genomic	ENSMUSG00000041355.14	novel	NA	NA	NA	NA	8210	1	mono-exon	FALSE	NA	NA	NA	NA	NA	326	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTCTTGCGTCAAC	NA	False	NA	16	True	AATAAA	-18	NA	88495187	88495727	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr3_+_88495200_88495700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081267	chr3	+	942	1	ISM	ENSMUSG00000028059.17	ENSMUST00000176500.8	4492	23	30968	0	3179	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	637	False	NA	15	True	ATTAAA	-17	NA	88554417	88555359	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_88554400_88555400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081296	chr3	+	834	4	NIC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	-10	8225	combination_of_known_junctions	FALSE	canonical	3	78	junction_3	45.1540572804802	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAAAGGGTACTAAGAGG	NA	False	NA	NA	False	GATAAA	-11	NA	88742524	88761947	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_+_88742597_88744296_88744828_88753694_88753887_88761908
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081324	chr3	-	1710	13	FSM	ENSMUSG00000068921.15	ENSMUST00000090938.11	4760	13	412	2638	-51	194	multi-exon	FALSE	canonical	3	805	junction_4	46.7537134591705	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTTTGTACTTTGATT	NA	False	NA	NA	False	NA	NA	NA	88857309	88830747	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081335	chr3	-	1375	12	FSM	ENSMUSG00000068921.15	ENSMUST00000107491.11	1375	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	248.490151458566	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88857258	88830941	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_88831221_88832600_88832719_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081342	chr3	-	1444	13	NNC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_12	242.742948175408	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88858510	88830941	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88858447
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081364	chr3	-	281	1	NIC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	1627	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	1336	False	NA	-7	True	ATTAAA	-17	NA	88831222	88830941	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_-_88830900_88831200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081372	chr3	-	915	7	ISM	ENSMUSG00000068921.15	ENSMUST00000107491.11	1375	12	-20	5544	-20	264	5prime_fragment	FALSE	canonical	3	827	junction_2	41.8728233265125	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTGAGAAAACCTTGAAT	NA	False	NA	NA	False	AATAAA	-22	NA	88857278	88836485	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081404	chr3	-	1163	10	NNC	ENSMUSG00000059743.13	novel	1237	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	751.199633179416	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTTTTATTCTTGT	NA	False	NA	-3	True	AATAAA	-14	NA	89009199	89000894	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006741_89007975_89008139_89009168
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081500	chr3	-	1092	8	NNC	ENSMUSG00000064068.16	novel	1522	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	274.014300237586	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGATCAAAGAATCCCTT	NA	False	NA	-22	True	AATAAA	-15	NA	89121214	89116393	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_89116729_89116811_89116967_89117413_89117491_89117572_89117756_89117886_89117984_89119989_89120070_89120183_89120254_89121119
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081501	chr3	-	1143	8	NNC	ENSMUSG00000064068.16	novel	1522	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	280.477071710153	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGATCAAAGAATCCCTT	NA	False	NA	-22	True	AATAAA	-15	NA	89121214	89116393	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_89116729_89116811_89116967_89117358_89117491_89117572_89117756_89117890_89117984_89119989_89120070_89120183_89120254_89121119
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081518	chr3	+	558	6	NNC	ENSMUSG00000042747.13	novel	1172	5	NA	NA	-5726	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	711.161416276221	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTCTGTGAACTGTGA	1397	False	NA	21	True	AATAAA	-15	NA	89147546	89157030	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_89147567_89153723_89153823_89154084_89154240_89154371_89154436_89156380_89156448_89156877
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081519	chr3	+	768	6	NNC	ENSMUSG00000042747.13	novel	1172	5	NA	NA	-5726	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	711.161416276221	4865	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTGCGTGTGTGTGTG	1397	False	NA	NA	False	AATACA	-26	NA	89147546	89157222	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_89147567_89153705_89153823_89154084_89154240_89154371_89154436_89156380_89156448_89156877
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081521	chr3	+	567	6	NNC	ENSMUSG00000042747.13	novel	1172	5	NA	NA	-5726	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	711.161416276221	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTCTGTGAACTGTGA	1397	False	NA	21	True	AATAAA	-15	NA	89147546	89157030	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_89147567_89153714_89153823_89154084_89154240_89154371_89154436_89156380_89156448_89156877
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081583	chr3	+	501	1	FSM	ENSMUSG00000042737.10	ENSMUST00000137975.2	441	1	-60	0	27	0	mono-exon	FALSE	NA	NA	NA	NA	NA	650	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTAGTTTTGAGTAT	6804	False	NA	19	True	ATTAAA	-20	NA	89173885	89174386	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_89173900_89174400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081612	chr3	-	404	1	ISM	ENSMUSG00000028039.12	ENSMUST00000029673.10	2363	5	8082	581	6748	-581	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGTGTGTGTGGTTTCA	5196	False	NA	NA	False	AATAAA	-16	NA	89222190	89221786	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_89221800_89222200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081614	chr3	-	1641	4	FSM	ENSMUSG00000028040.8	ENSMUST00000029674.8	1599	4	-37	-5	-37	5	multi-exon	FALSE	canonical	3	34	junction_1	2.62466929133727	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTGTGTGGCCCTCCC	1575	False	NA	NA	False	AATAAA	-19	NA	89245372	89240691	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_89241740_89242088_89242158_89242483_89242780_89245144
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081625	chr3	-	1067	6	FSM	ENSMUSG00000028041.18	ENSMUST00000155295.8	1034	6	-29	-4	0	4	multi-exon	FALSE	canonical	3	122	junction_5	16.0549057923116	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTTTGATTTGCTTTTG	NA	False	NA	NA	False	ATTAAA	-28	NA	89257296	89253830	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081642	chr3	-	1334	1	FSM	ENSMUSG00000078173.4	ENSMUST00000057431.6	1806	1	-509	981	-509	-981	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGAATGAGGGCATGTGTG	NA	False	NA	0	True	AATAAA	-35	NA	89310609	89309275	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_89309300_89310600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081648	chr3	-	1770	8	NIC	ENSMUSG00000042642.14	novel	2238	8	NA	NA	-18	-415	combination_of_known_junctions	FALSE	canonical	3	35	junction_7	105.155666921542	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGGTGCCTGTTGCTCT	3719	False	NA	-15	True	AGTAAA	-18	NA	89319195	89310388	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319124
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081685	chr3	-	496	1	NIC	ENSMUSG00000028044.7	novel	849	3	NA	NA	2050	0	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGTGGTTATAAGACTGT	NA	False	NA	-12	True	ATTAAA	-22	NA	89323274	89322778	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_-_89322800_89323300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081738	chr3	+	308	1	Intergenic	novelGene_276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCTGTGGCTGTGTTGTC	6816	False	NA	NA	False	NA	NA	NA	89402531	89402839	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr3_+_89402500_89402800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081740	chr3	-	522	2	Antisense	novelGene_ENSMUSG00000000794.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTCCCTTTCTTAAATTG	NA	False	NA	NA	False	AATAAA	-24	NA	89574592	89573970	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr3_-_89574143_89574242
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081771	chr3	-	1247	7	NIC	ENSMUSG00000027944.14	novel	1139	7	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_6	656.238629531125	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGTTTTGTCAAGGTC	7182	False	NA	NA	False	AATAAA	-26	NA	89906012	89902752	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905411_89905834
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081816	chr3	-	1120	7	NNC	ENSMUSG00000027944.14	novel	1092	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	691.075831986299	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTAGTCTTGGTTTTGT	7197	False	NA	NA	False	AATAAA	-19	NA	89905997	89902759	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904873_89905040_89905311_89905834
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081826	chr3	-	1051	6	ISM	ENSMUSG00000027944.14	ENSMUST00000197767.5	1092	7	565	0	261	0	3prime_fragment	FALSE	canonical	3	138	junction_5	691.189409641091	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTAGTCTTGGTTTTGT	7786	False	NA	NA	False	AATAAA	-19	NA	89905408	89902759	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904873_89905044
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081852	chr3	-	162	1	Genic_Genomic	ENSMUSG00000042520.17	novel	NA	NA	NA	NA	-2368	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGCTTTTATGTCT	NA	False	NA	NA	False	AATAAA	-19	NA	89913461	89913299	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr3_-_89913300_89913500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081884	chr3	+	1063	1	ISM	ENSMUSG00000027940.19	ENSMUST00000119570.8	2233	9	27189	0	9781	0	mono-exon	FALSE	NA	NA	NA	NA	NA	327	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGGCTTGACTTTGTTAA	6305	False	NA	19	True	AATAAA	-22	NA	90007146	90008209	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_90007100_90008200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081900	chr3	-	350	4	NNC	ENSMUSG00000090733.7	novel	329	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8662.67496536466	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTCTTGTTTAACTGG	NA	False	NA	-2	True	AATAAA	-19	NA	90120959	90119973	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_90120048_90120227_90120352_90120499_90120609_90120916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081901	chr3	-	333	4	FSM	ENSMUSG00000090733.7	ENSMUST00000197361.5	329	4	0	-4	0	0	multi-exon	TRUE	canonical	2	296	junction_1	8530.83639249725	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTCTTGTTTAACTGG	NA	False	NA	-2	True	AATAAA	-19	NA	90120955	90119973	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_90120048_90120240_90120352_90120499_90120609_90120916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081905	chr3	-	575	4	FSM	ENSMUSG00000090733.7	ENSMUST00000200305.2	546	4	-25	-4	0	0	multi-exon	FALSE	canonical	3	63	junction_3	8789.54951443285	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTCTTGTTTAACTGG	NA	False	NA	-2	True	AATAAA	-19	NA	90120955	90119973	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_90120061_90120240_90120352_90120499_90120609_90120687
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081906	chr3	-	337	4	NNC	ENSMUSG00000090733.7	novel	458	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8818.28286383844	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTCTTGTTTAACTGG	NA	False	NA	-2	True	AATAAA	-19	NA	90120955	90119973	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_90120061_90120240_90120352_90120499_90120600_90120916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081912	chr3	-	389	4	NNC	ENSMUSG00000090733.7	novel	458	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	8817.37059571742	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTCTTGTTTAACTGG	NA	False	NA	-2	True	AATAAA	-19	NA	90120955	90119973	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_90120061_90120240_90120352_90120499_90120609_90120873
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081922	chr3	-	674	2	FSM	ENSMUSG00000090733.7	ENSMUST00000196196.2	279	2	-3	-392	0	0	multi-exon	FALSE	canonical	3	13930	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTCTTGTTTAACTGG	NA	False	NA	-2	True	AATAAA	-19	NA	90120955	90119973	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_90120609_90120916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081924	chr3	-	982	1	Genic_Genomic	ENSMUSG00000090733.7	novel	NA	NA	NA	NA	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTCTTGTTTAACTGG	NA	False	NA	-2	True	AATAAA	-19	NA	90120955	90119973	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr3_-_90120000_90121000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081962	chr3	+	1452	3	NIC	ENSMUSG00000027937.16	novel	1101	5	NA	NA	0	1	intron_retention	FALSE	canonical	3	314	junction_2	23	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTAGTGTAATCATTTGG	NA	False	NA	5	True	AATAAA	-15	NA	90138903	90143146	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_+_90139819_90141229_90141310_90142689
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000081980	chr3	+	255	1	ISM	ENSMUSG00000027936.19	ENSMUST00000029545.15	2747	14	9708	0	4906	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTGGCTATTTGGT	NA	False	NA	NA	False	AATAAA	-19	NA	90171177	90171432	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_90171200_90171400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082002	chr3	-	842	4	NNC	ENSMUSG00000027931.13	novel	4066	22	NA	NA	2369	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	63.2824356884805	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCTTCTTGGGAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	90362414	90357897	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_90358490_90358612_90358705_90362124_90362224_90362355
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082025	chr3	+	921	1	ISM	ENSMUSG00000001016.13	ENSMUST00000001042.10	2027	14	11312	0	6780	0	mono-exon	FALSE	NA	NA	NA	NA	NA	490	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTACAAGCATTTATTTA	NA	False	NA	18	True	AATAAA	-23	NA	90394765	90395686	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_90394800_90395700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082029	chr3	-	2079	2	FSM	ENSMUSG00000001018.16	ENSMUST00000107352.2	1843	2	-573	337	-8	7	multi-exon	FALSE	canonical	3	714	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTATTATGGTTTCA	NA	False	NA	-19	True	AATAAA	-30	NA	90398308	90395669	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_90396901_90397460
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082033	chr3	-	1804	3	FSM	ENSMUSG00000001018.16	ENSMUST00000107351.2	958	3	-209	-637	-8	7	multi-exon	FALSE	canonical	3	694	junction_2	10	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTATTATGGTTTCA	NA	False	NA	-19	True	AATAAA	-30	NA	90398308	90395669	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_90396901_90397460_90397580_90397854
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082040	chr3	-	313	1	Intergenic	novelGene_277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGAATCCTTACTTGAT	NA	False	NA	NA	False	AAGAAA	-22	NA	90406150	90405837	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr3_-_90405800_90406200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082044	chr3	-	1204	1	Genic_Genomic	ENSMUSG00000001017.16	novel	NA	NA	NA	NA	8913	50	mono-exon	FALSE	NA	NA	NA	NA	NA	262	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGTGTGTTAATATGT	NA	False	NA	-2	True	NA	NA	NA	90407416	90406212	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr3_-_90406200_90407400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082069	chr3	-	462	2	NIC	ENSMUSG00000044080.10	novel	677	3	NA	NA	-52	1	combination_of_known_splicesites	FALSE	canonical	2	13	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTCTGTACCCTCTGG	NA	False	NA	-2	True	AATAAA	-21	NA	90421637	90418339	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_-_90418672_90421507
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082092	chr3	+	499	3	NNC	ENSMUSG00000042312.11	novel	715	4	NA	NA	513	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	114.5	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTTATTTATTTATTTAT	NA	False	NA	16	True	AATAAA	-21	NA	90422254	90431889	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_90422327_90423156_90423354_90431659
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082103	chr3	+	1282	2	NIC	ENSMUSG00000042312.11	novel	715	4	NA	NA	557	2	intron_retention	FALSE	canonical	3	396	junction_1	0	843	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTATTTATTTATTTATT	NA	False	NA	17	True	AATAAA	-22	NA	90422298	90431890	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_+_90423350_90431659
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082110	chr3	+	231	1	NIC	ENSMUSG00000042312.11	novel	715	4	NA	NA	9916	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTTATTTATTTATTTA	NA	False	NA	15	True	AATAAA	-20	NA	90431657	90431888	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_+_90431700_90431900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082114	chr3	+	425	1	ISM	ENSMUSG00000042306.12	ENSMUST00000164481.7	915	3	1546	0	1541	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGTCTTGACTCTTTA	1914	False	NA	15	True	AATAAA	-20	NA	90435719	90436144	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_90435700_90436100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082122	chr3	+	997	3	FSM	ENSMUSG00000074457.11	ENSMUST00000107331.8	723	3	15	-289	3	0	multi-exon	FALSE	canonical	0	0	junction_1	11.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTGCTTCCTTTGT	NA	False	NA	11	True	AATAAA	-22	NA	90448470	90450458	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_90448502_90449300_90449480_90449671
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082144	chr3	-	2685	2	Genic_Genomic	ENSMUSG00000104028.2_ENSMUSG00000103286.2	novel	1206	1	NA	NA	-29	68	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATCAAAGGGGAAGAAAGT	NA	False	NA	NA	False	AATGAA	-23	NA	92170810	92134707	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr3_-_92136074_92169491
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082151	chr3	+	1896	1	FSM	ENSMUSG00000091421.4	ENSMUST00000169025.4	733	1	-129	-1034	-129	1034	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGAGAGATGAATCCAT	NA	False	NA	NA	False	AAAAAG	-5	NA	92596603	92598499	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_92596600_92598500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082162	chr3	+	748	3	FSM	ENSMUSG00000041959.15	ENSMUST00000045756.14	685	3	-56	-7	-56	7	multi-exon	TRUE	canonical	3	427	junction_2	41.5	1501	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTAGAGTGTTTCTTGCTCC	NA	False	NA	27	True	AATAAA	-31	NA	93462330	93471957	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_93462519_93468250_93468403_93471549
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082231	chr3	-	1010	2	NNC	ENSMUSG00000081355.2	novel	502	6	NA	NA	-32	-25634	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTGTCCCGTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	94665455	94652963	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_94653860_94665341
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082248	chr3	-	815	7	NNC	ENSMUSG00000005779.13	novel	1183	7	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	673.124720158819	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGAGTTGGATTTTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	94794284	94791634	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_94791752_94791981_94792071_94792227_94792345_94792970_94793053_94793385_94793533_94793751_94793959_94794228
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082286	chr3	-	1302	10	NNC	ENSMUSG00000005625.16	novel	1276	10	NA	NA	-20	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	690.380589258339	147	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGATAGCTTTGCACACA	NA	False	NA	-4	True	AATAAA	-31	NA	94949883	94939998	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_94940293_94940792_94940858_94940943_94941076_94941219_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082321	chr3	-	855	2	NNC	ENSMUSG00000028126.17	novel	724	2	NA	NA	-14	4	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTAGAGGAGTTGGTCC	1239	False	NA	NA	False	AATAAA	-37	NA	95014200	95004349	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_95004691_95013686
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082324	chr3	+	1505	6	FSM	ENSMUSG00000008958.15	ENSMUST00000009102.9	1456	6	-10	-39	-10	39	multi-exon	FALSE	canonical	0	0	junction_1	358.969413738831	1517	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGCTAATTTATCCAG	2550	False	NA	NA	False	NA	NA	NA	95018322	95030401	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_95018526_95025535_95025689_95025959_95026075_95026441_95026619_95028572_95028718_95029689
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082354	chr3	-	862	7	NNC	ENSMUSG00000092607.10	novel	1054	7	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_2	139.962395743365	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGAGTCCGGTTCCTTG	1281	False	NA	-23	True	AATAAA	-28	NA	95041279	95037029	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_95037195_95037474_95037670_95040101_95040225_95040327_95040423_95040510_95040600_95040868_95040940_95041155
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082413	chr3	-	1311	1	ISM	ENSMUSG00000015711.9	ENSMUST00000015855.8	3140	8	27092	0	13960	0	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTGTTTCTTTTTAAAA	NA	False	NA	NA	False	ATTAAA	-19	NA	95162295	95160984	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_95161000_95162300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082416	chr3	-	2835	8	FSM	ENSMUSG00000015711.9	ENSMUST00000015855.8	3140	8	305	0	305	0	multi-exon	FALSE	canonical	3	150	junction_5	23.7538396466589	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTGTTTCTTTTTAAAA	4655	False	NA	NA	False	ATTAAA	-19	NA	95189082	95160984	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_95162739_95165337_95165497_95166550_95166646_95169521_95169681_95170902_95171088_95172728_95172932_95175541_95175635_95188895
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082427	chr3	-	565	2	FSM	ENSMUSG00000093424.4	ENSMUST00000176569.3	555	2	-8	-2	-8	2	multi-exon	FALSE	canonical	2	7	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTACATTGTTGCT	9727	False	NA	NA	False	NA	NA	NA	95222446	95218686	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_95218919_95222113
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082441	chr3	-	621	1	ISM	ENSMUSG00000015697.15	ENSMUST00000124638.8	5652	21	33010	0	32944	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGTCTGAAATGGTC	9714	False	NA	-4	True	ATTAAA	-15	NA	95231456	95230835	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_95230800_95231500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082445	chr3	+	196	1	Intergenic	novelGene_278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAACAAGTCAGTCAACAT	NA	False	NA	NA	False	NA	NA	NA	95259142	95259338	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr3_+_95259100_95259300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082461	chr3	+	1300	1	ISM	ENSMUSG00000015522.19	ENSMUST00000090804.12	4325	21	61551	0	6536	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95403251	95404551	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_95403300_95404600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082476	chr3	+	1243	14	NIC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	92.4469462438997	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTTTACCTGAGATA	NA	False	NA	NA	False	AATAAA	-15	NA	95466989	95494907	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_+_95467044_95468538_95468592_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082507	chr3	+	665	5	NNC	ENSMUSG00000038619.13	novel	1130	4	NA	NA	-13	-1604	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_4	225.514411956309	77	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCGATCTTCTCGAATTC	369	False	NA	27	True	NA	NA	NA	95532290	95537809	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_95532488_95534059_95534186_95535851_95536019_95536546_95536610_95537697
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082560	chr3	-	540	4	NNC	ENSMUSG00000015748.14	novel	2548	13	NA	NA	-1328	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	214.324261083268	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATATTTTTCATATGG	NA	False	NA	-31	True	ATTAAA	-19	NA	95741448	95737926	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_95738278_95739872_95739935_95741064_95741149_95741405
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082567	chr3	-	736	5	NNC	ENSMUSG00000015748.14	novel	2548	13	NA	NA	193	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	197.718233858185	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTATGATATTTTTCATA	NA	False	NA	-34	True	ATTAAA	-16	NA	95742784	95737929	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741515_95742661
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082596	chr3	-	1433	6	NIC	ENSMUSG00000038550.11	novel	1398	6	NA	NA	13	3	combination_of_known_junctions	FALSE	canonical	3	53	junction_5	52.0292225580971	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTTTTTTTTTTTTT	NA	False	NA	2	True	ATTAAA	-18	NA	95789373	95785811	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788902_95789266
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082597	chr3	-	1024	5	NIC	ENSMUSG00000038550.11	novel	1939	5	NA	NA	13	3	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	78.2959130478724	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTTTTTTTTTTTTT	NA	False	NA	2	True	ATTAAA	-18	NA	95789373	95785811	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95789266
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082649	chr3	+	1409	7	NNC	ENSMUSG00000015749.13	novel	3274	7	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	605.073939467089	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGGTGTAGTTTGGTGCA	NA	False	NA	13	True	ATTAAA	-16	NA	95836602	95852878	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_95836963_95841220_95841371_95842087_95842215_95844335_95844508_95845193_95845352_95851618_95851674_95852491
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082661	chr3	-	2040	15	FSM	ENSMUSG00000015747.6	ENSMUST00000015891.6	2637	15	597	0	-39	0	multi-exon	TRUE	canonical	3	42	junction_11	13.9571136130707	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTTCAGTGTTTGATGG	NA	False	NA	-5	True	AATAAA	-26	NA	95965181	95907143	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_95907464_95926920_95927053_95938317_95938440_95940090_95940199_95940976_95941136_95948649_95948818_95949620_95949735_95950105_95950241_95953663_95953775_95954309_95954448_95954558_95954628_95955619_95955700_95960350_95960412_95964291_95964427_95964993
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082669	chr3	+	2144	6	FSM	ENSMUSG00000068856.4	ENSMUST00000076372.5	1915	6	174	-403	-41	403	multi-exon	FALSE	canonical	3	1297	junction_3	204.272758829953	1065	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGCCATTTTATTTT	NA	False	NA	11	True	ATTAAA	-13	NA	96079821	96085283	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_96079924_96080286_96080416_96080856_96081400_96081638_96081846_96083950_96084125_96084294
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082679	chr3	-	932	3	NIC	ENSMUSG00000015943.12	novel	995	4	NA	NA	7	6	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	219	2410	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCTCTTAATACCTGTTA	NA	False	NA	NA	False	AATAAA	-27	NA	96105798	96103897	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_-_96104596_96104865_96105054_96105752
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082699	chr3	+	214	1	Intergenic	novelGene_279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAATGGAATCTACCTAA	1786	False	NA	NA	False	NA	NA	NA	96249638	96249852	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr3_+_96249600_96249900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082701	chr3	+	1768	7	NNC	ENSMUSG00000038374.11	novel	2604	6	NA	NA	-187659	-879	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1674.23017135239	10625	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCCCTTCTCTTCCTTTT	NA	False	NA	11	True	ATTAAA	-23	NA	96349589	96540228	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_96349635_96537257_96537345_96537617_96537678_96537792_96537871_96538181_96538319_96538747_96538885_96539004
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082742	chr3	+	528	2	ISM	ENSMUSG00000049288.5	ENSMUST00000062058.5	3312	6	20923	2129	3771	1814	3prime_fragment	FALSE	canonical	3	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGCTCCCTATTTGCT	774	False	NA	NA	False	TATAAA	-6	NA	96529387	96531358	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_96529537_96530979
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082792	chr3	+	714	6	NNC	ENSMUSG00000038374.11	novel	2604	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1756.05239101799	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTACTTTACTGTTC	8642	False	NA	16	True	AATAAA	-20	NA	96537255	96539216	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_96537345_96537617_96537684_96537797_96537871_96538181_96538319_96538747_96538885_96539004
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082793	chr3	+	828	5	NIC	ENSMUSG00000038374.11	novel	2604	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	4271	junction_2	82.5359770039708	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTACTTTACTGTTC	8642	False	NA	16	True	AATAAA	-20	NA	96537255	96539216	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_+_96537345_96537617_96537871_96538181_96538319_96538747_96538885_96539004
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082795	chr3	+	717	6	NNC	ENSMUSG00000038374.11	novel	2604	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1770.33890540766	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTACTTTACTGTTC	8642	False	NA	16	True	AATAAA	-20	NA	96537255	96539216	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_96537345_96537617_96537678_96537792_96537875_96538181_96538319_96538747_96538885_96539004
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082796	chr3	+	714	6	NNC	ENSMUSG00000038374.11	novel	2608	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1756.05239101799	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTACTTTACTGTTC	8642	False	NA	16	True	AATAAA	-20	NA	96537255	96539216	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_96537345_96537617_96537682_96537795_96537871_96538181_96538319_96538747_96538885_96539004
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082806	chr3	+	706	6	NIC	ENSMUSG00000038374.11	novel	2608	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	1727.48619676106	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTACTTTACTGTTC	8642	False	NA	16	True	AATAAA	-20	NA	96537255	96539216	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_+_96537345_96537621_96537678_96537795_96537871_96538181_96538319_96538747_96538885_96539004
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082823	chr3	+	747	6	NIC	ENSMUSG00000038374.11	novel	2608	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	54	junction_1	1712.2576208036	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTACTTTACTGTTC	8642	False	NA	16	True	AATAAA	-20	NA	96537255	96539216	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_+_96537382_96537617_96537678_96537795_96537871_96538181_96538319_96538747_96538885_96539004
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082872	chr3	+	187	1	Intergenic	novelGene_280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATAGCTGACTGATCTT	NA	False	NA	NA	False	NA	NA	NA	96593600	96593787	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr3_+_96593600_96593800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082874	chr3	+	500	5	NNC	ENSMUSG00000038354.14	novel	4052	13	NA	NA	8900	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.2861120915242	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTTGTGGTTTTTGTC	NA	False	NA	18	True	AATAAA	-18	NA	96596308	96598350	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_96596352_96596461_96596552_96596760_96596827_96597507_96597613_96598154
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082885	chr3	-	1149	8	FSM	ENSMUSG00000028100.12	ENSMUST00000029742.9	1039	8	-9	-101	-1	0	multi-exon	FALSE	canonical	3	11	junction_6	22.7075461699679	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTAAGTGAA	NA	False	NA	0	True	AATAAA	-15	NA	96615864	96613382	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_96613560_96613683_96613845_96614225_96614363_96614517_96614617_96614873_96614967_96615125_96615203_96615307_96615492_96615643
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082901	chr3	-	2210	15	FSM	ENSMUSG00000028099.9	ENSMUST00000029741.9	2390	15	150	30	-2	3	multi-exon	FALSE	canonical	3	175	junction_5	23.0394515240839	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATCTGTTCTTAGCAA	NA	False	NA	NA	False	AATAAA	-20	NA	96634794	96618835	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149_96633316_96634664
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082910	chr3	-	929	3	FSM	ENSMUSG00000028099.9	ENSMUST00000125183.2	923	3	-3	-3	-2	0	multi-exon	FALSE	canonical	3	207	junction_1	7.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTGTGTGCCAGTCAT	NA	False	NA	-1	True	AATGAA	-22	NA	96634794	96630735	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_96631369_96633149_96633316_96634664
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082962	chr3	+	267	1	ISM	ENSMUSG00000038205.13	ENSMUST00000045743.13	5006	8	15334	0	3348	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAGTTACTTACTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	97580861	97581128	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_97580900_97581100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082967	chr3	-	1195	1	Genic_Genomic	ENSMUSG00000038170.16	novel	NA	NA	NA	NA	27889	6	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTTCTTATAGAAGTTT	NA	False	NA	-3	True	AATAAA	-21	NA	97647358	97646163	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr3_-_97646200_97647400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082974	chr3	+	955	6	NNC	ENSMUSG00000027879.10	novel	2810	5	NA	NA	0	1724	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	137.190378671392	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATATTTTCTGTGCAGT	NA	False	NA	NA	False	AATATA	-17	NA	97808542	97832316	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_97808737_97814536_97814647_97819894_97820056_97821815_97821963_97828431_97828562_97832103
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082985	chr3	-	1823	12	NNC	ENSMUSG00000053398.12	novel	1893	12	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	546.899087190908	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGTCTGTGTGATCAT	NA	False	NA	-2	True	AGTAAA	-16	NA	98247240	98220485	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_98220774_98221483_98221722_98222380_98222512_98223721_98223855_98226935_98227089_98227961_98228111_98228528_98228662_98235362_98235462_98235604_98235656_98240550_98240617_98241822_98241975_98247010
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000082986	chr3	-	1831	12	NNC	ENSMUSG00000053398.12	novel	1893	12	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	540.249743289126	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGTCTGTGTGATCAT	NA	False	NA	-2	True	AGTAAA	-16	NA	98247240	98220485	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_98220774_98221483_98221722_98222380_98222512_98223721_98223855_98226931_98227089_98227961_98228111_98228528_98228662_98235362_98235462_98235604_98235660_98240550_98240617_98241822_98241975_98247010
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083020	chr3	-	3432	27	FSM	ENSMUSG00000033285.16	ENSMUST00000052120.14	3432	27	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_13	50.4098586206493	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGGTTCCCTGAATAT	NA	False	NA	-15	True	ATTAAA	-15	NA	100069723	100045495	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083043	chr3	-	1263	8	ISM	ENSMUSG00000033161.11	ENSMUST00000036493.8	3679	23	22532	4	-4592	-4	3prime_fragment	FALSE	canonical	3	330	junction_6	53.0409930032943	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTGAGTCCTTGTC	NA	False	NA	-10	True	AATAAA	-20	NA	101489468	101483538	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_101483901_101484234_101484327_101486309_101486412_101486836_101486968_101487089_101487236_101488462_101488587_101489040_101489196_101489317
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083114	chr3	+	2382	5	FSM	ENSMUSG00000027854.13	ENSMUST00000029447.12	7375	5	17	4976	-5	1289	multi-exon	FALSE	canonical	3	364	junction_4	22.0609949911603	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTCATTTTACTGAGAA	NA	False	NA	20	True	AATAAA	-17	NA	102903040	102910799	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_102903284_102903471_102903578_102904558_102904702_102905805_102905920_102909023
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083155	chr3	+	465	2	ISM	ENSMUSG00000070385.13	ENSMUST00000177250.2	751	6	4405	-16	4405	2	3prime_fragment	FALSE	canonical	3	22	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCGAGTGGGTTTTTCATT	NA	False	NA	NA	False	AATAAA	-20	NA	103006170	103007038	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_103006453_103006855
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083158	chr3	-	457	2	Antisense	novelGene_ENSMUSG00000007379.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_1	0	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTTACATTTTTATGA	NA	False	NA	NA	False	AATAAA	-35	NA	103029424	103026095	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr3_-_103026360_103029231
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083171	chr3	+	1438	7	FSM	ENSMUSG00000005687.15	ENSMUST00000135017.2	1405	7	-36	3	-13	-3	multi-exon	FALSE	canonical	3	101	junction_2	1366.36225268249	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATGTTTTCATTTTAAT	5010	False	NA	NA	False	NA	NA	NA	103079051	103086479	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_103079182_103079263_103079357_103080549_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083193	chr3	+	809	1	ISM	ENSMUSG00000005687.15	ENSMUST00000135017.2	1405	7	6583	3	6570	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	301	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATGTTTTCATTTTAAT	NA	False	NA	NA	False	NA	NA	NA	103085670	103086479	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_103085700_103086500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083209	chr3	-	656	2	NNC	ENSMUSG00000054379.8	novel	669	5	NA	NA	-20578	117	intron_retention	FALSE	canonical	3	80	junction_1	0	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCCTTGCAATTTTATT	NA	False	NA	-23	True	NA	NA	NA	103126869	103105424	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_103106004_103126792
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083241	chr3	-	468	1	Genic_Genomic	ENSMUSG00000054379.8	novel	NA	NA	NA	NA	286	4	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCGTCCCAGGTTTCTTC	NA	False	NA	1	True	NA	NA	NA	103106005	103105537	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr3_-_103105500_103106000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083243	chr3	+	540	2	Antisense	novelGene_ENSMUSG00000054379.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTGGAAGGCAGACATGC	2858	False	NA	NA	False	NA	NA	NA	103105537	103106156	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr3_+_103106032_103106110
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083246	chr3	-	656	2	NNC	ENSMUSG00000054379.8	novel	669	5	NA	NA	-20577	4	intron_retention	FALSE	canonical	3	58	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCGTCCCAGGTTTCTTC	NA	False	NA	1	True	NA	NA	NA	103126868	103105537	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_103106118_103126792
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083262	chr3	-	309	2	ISM	ENSMUSG00000008730.18	ENSMUST00000135634.2	2430	9	32614	-16	-7596	16	3prime_fragment	FALSE	canonical	3	77	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTATTTGCTTTGACTAT	NA	False	NA	NA	False	NA	NA	NA	103665977	103661456	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_103661639_103665850
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083280	chr3	+	3222	5	FSM	ENSMUSG00000032902.2	ENSMUST00000046212.2	4426	5	0	1204	0	-1204	multi-exon	FALSE	canonical	3	470	junction_2	50.2462685181696	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCTTCCGCATGTTTAT	NA	False	NA	23	True	AATAAA	-24	NA	104545983	104564574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_104546145_104556573_104556834_104558201_104558346_104560057_104560904_104562763
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083287	chr3	-	924	1	FSM	ENSMUSG00000089999.2	ENSMUST00000160676.2	439	1	-131	-354	-131	354	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGCTCACAGTTTTG	NA	False	NA	0	True	AATAAA	-24	NA	104660612	104659688	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_104659700_104660600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083298	chr3	+	1354	5	FSM	ENSMUSG00000002233.14	ENSMUST00000002303.12	1202	5	-134	-18	-134	18	multi-exon	FALSE	canonical	3	201	junction_3	22.8965062837106	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGGCCTACCTTGGCTG	NA	False	NA	31	True	AATAAA	-38	NA	104696069	104701793	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_104696400_104699204_104699369_104699880_104700002_104700215_104700347_104701185
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083305	chr3	+	1050	5	NNC	ENSMUSG00000002233.14	novel	1202	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	103.366762065956	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTCCTGTCTTT	NA	False	NA	13	True	AATAAA	-20	NA	104696349	104701775	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_104696400_104699210_104699369_104699880_104700002_104700215_104700347_104701185
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083308	chr3	+	1074	5	FSM	ENSMUSG00000002233.14	ENSMUST00000106787.8	959	5	0	-115	0	0	multi-exon	FALSE	canonical	2	16	junction_1	97.4586450757448	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTCCTGTCTTT	NA	False	NA	13	True	AATAAA	-20	NA	104696349	104701775	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_104696418_104699204_104699369_104699880_104700002_104700215_104700347_104701185
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083324	chr3	-	2941	10	FSM	ENSMUSG00000070372.12	ENSMUST00000094028.10	3193	10	98	154	-7	-154	multi-exon	FALSE	canonical	3	308	junction_2	396.900211360208	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGTCCTTTCTGTC	9271	False	NA	-11	True	AATACA	-18	NA	104771723	104730248	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_104732441_104732722_104732786_104735842_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083339	chr3	-	560	1	ISM	ENSMUSG00000027905.16	ENSMUST00000090680.11	2905	11	8745	0	8615	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTTTATTCTGTCGAG	NA	False	NA	0	True	AATAAA	-23	NA	105586145	105585585	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_105585600_105586100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083348	chr3	-	2441	8	FSM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	-30	-4	-30	4	multi-exon	TRUE	canonical	3	409	junction_7	23.7667234354495	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCTTCTCTTTATCCAG	NA	False	NA	-14	True	AATAAA	-16	NA	105708682	105634578	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829_105646971_105648661_105648719_105653219_105653289_105657560_105657645_105708554
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083352	chr3	-	472	1	ISM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	72583	1015	21575	32	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTGTGTCTTTTTGT	NA	False	NA	-12	True	ATTAAA	-41	NA	105636069	105635597	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_105635600_105636100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083381	chr3	-	1156	7	NNC	ENSMUSG00000000563.18	novel	1604	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_6	1728.67248359993	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATAAGTTTCATACTCTG	NA	False	NA	-20	True	AATAAA	-16	NA	105866580	105850013	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866443
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083382	chr3	-	1163	7	NNC	ENSMUSG00000000563.18	novel	1604	8	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1716.15572493356	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATAAGTTTCATACTCTG	NA	False	NA	-20	True	AATAAA	-16	NA	105866603	105850013	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866173_105866215_105866463
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083389	chr3	-	1123	6	NNC	ENSMUSG00000000563.18	novel	1604	8	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1822.08072269041	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATAAGTTTCATACTCTG	NA	False	NA	-20	True	AATAAA	-16	NA	105866584	105850013	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866443
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083419	chr3	+	3250	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	45	387	45	-387	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTGGGGGCTCTATCT	NA	False	NA	8	True	AATAAA	-19	NA	105866729	105876689	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083425	chr3	+	1137	8	FSM	ENSMUSG00000000561.15	ENSMUST00000127464.8	1095	8	-39	-3	-39	3	multi-exon	FALSE	canonical	3	910	junction_4	52.8737425671876	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGAGTCTGAGTAACT	NA	False	NA	NA	False	AATATA	-19	NA	105866784	105873411	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083441	chr3	+	434	1	FSM	ENSMUSG00000092072.4	ENSMUST00000170669.4	429	1	-5	0	-5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	682	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATTATTTATTCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105941974	105942408	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_105942000_105942400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083447	chr3	-	580	1	ISM	ENSMUSG00000040774.16	ENSMUST00000068301.11	2814	9	44243	720	44023	3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTTTCTCAATTTTATT	NA	False	NA	-2	True	AATAAA	-19	NA	106410875	106410295	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_106410300_106410900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083487	chr3	+	746	4	NNC	ENSMUSG00000087260.6	novel	743	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	565.449870064142	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTCATTTCTGGTCT	3152	False	NA	12	True	AATAAA	-16	NA	107186315	107191398	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_107186430_107187185_107187252_107189224_107189343_107190950
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083491	chr3	+	746	4	NNC	ENSMUSG00000087260.6	novel	743	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	536.126850661296	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTCATTTCTGGTCT	3152	False	NA	12	True	AATAAA	-16	NA	107186315	107191398	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_107186430_107187185_107187248_107189224_107189347_107190950
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083509	chr3	-	946	2	NNC	ENSMUSG00000048109.11	novel	4343	2	NA	NA	37	-516	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	30	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCCTGGAAGTGAATT	NA	False	NA	-1	True	AATAAA	-24	NA	107240380	107233252	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_107233621_107239802
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083514	chr3	-	2649	9	ISM	ENSMUSG00000027893.15	ENSMUST00000144864.8	1689	10	655	-1367	-410	2	3prime_fragment	FALSE	canonical	3	702	junction_5	32.961862432211	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTCGTGTGTCTTTTTTG	NA	False	NA	0	True	ATTAAA	-27	NA	107577235	107570431	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083529	chr3	-	1161	8	FSM	ENSMUSG00000068762.12	ENSMUST00000106685.9	1153	8	-8	0	-8	0	multi-exon	FALSE	canonical	3	28	junction_3	8.51649060616507	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCCTGTCGTATT	1782	False	NA	-1	True	AGTAAA	-16	NA	107851073	107846162	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_107846633_107848308_107848420_107848504_107848601_107849448_107849550_107849648_107849731_107850017_107850083_107850560_107850637_107850913
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083541	chr3	-	1118	7	NIC	ENSMUSG00000004038.10	novel	1311	8	NA	NA	111	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_4	86.6033422501054	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTCTTTTTCTTTTGC	NA	False	NA	0	True	AATAAA	-20	NA	107876488	107871011	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_-_107871613_107873402_107873514_107873594_107873691_107874890_107874992_107875451_107875517_107876078_107876155_107876420
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083544	chr3	-	1198	8	NNC	ENSMUSG00000004038.10	novel	1311	8	NA	NA	111	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	92.8850507512443	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTCTTTTTCTTTTGC	NA	False	NA	0	True	AATAAA	-20	NA	107876488	107871011	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_107871613_107873402_107873514_107873594_107873691_107874890_107874992_107875083_107875164_107875451_107875517_107876078_107876155_107876420
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083613	chr3	-	1482	8	FSM	ENSMUSG00000027890.18	ENSMUST00000178808.8	1462	8	-18	-2	-11	0	multi-exon	FALSE	canonical	3	22	junction_7	32.937169624258	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGATGTCTTTTCCTAC	NA	False	NA	-4	True	AATAAA	-20	NA	107952193	107947723	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950835_107950918_107951210_107951276_107951668_107951745_107952160
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083647	chr3	+	1037	9	NNC	ENSMUSG00000068749.10	novel	1239	9	NA	NA	214	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	973.551544282582	1457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCTGTGATCTTATAATT	NA	False	NA	19	True	AATAAA	-23	NA	108164455	108187298	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_108164626_108169001_108169069_108172381_108172509_108173748_108173817_108175108_108175217_108175348_108175408_108176143_108176247_108179606_108179694_108187050
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083651	chr3	+	920	8	ISM	ENSMUSG00000068749.10	ENSMUST00000090569.10	1239	9	237	7439	237	-7361	5prime_fragment	FALSE	canonical	3	2544	junction_4	262.505898864722	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGGACTGGGTGTGCTT	NA	False	NA	NA	False	AATGAA	-43	NA	108164478	108179851	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_108164622_108169001_108169069_108172381_108172509_108173748_108173817_108175108_108175217_108175348_108175408_108176143_108176247_108179606
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083657	chr3	+	993	9	NNC	ENSMUSG00000068749.10	novel	1239	9	NA	NA	238	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	973.551544282582	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAATAGTCTGTGATCT	NA	False	NA	12	True	AATAAA	-16	NA	108164479	108187291	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_108164613_108169001_108169069_108172381_108172509_108173748_108173817_108175108_108175217_108175348_108175408_108176143_108176247_108179606_108179694_108187050
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083682	chr3	+	242	1	NIC	ENSMUSG00000068749.10	novel	1239	9	NA	NA	10858	0	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTAATAGTCTGTGATC	631	False	NA	11	True	AATAAA	-15	NA	108187048	108187290	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_+_108187000_108187300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083741	chr3	+	1327	4	FSM	ENSMUSG00000048100.14	ENSMUST00000143054.2	2443	4	-29	1145	-28	8	multi-exon	FALSE	canonical	3	149	junction_1	10.4986771653491	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTGTTTGCTTGTTTGT	NA	False	NA	22	True	AATAAA	-31	NA	108478985	108489393	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_108479065_108480195_108480275_108485431_108485530_108488322
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083749	chr3	+	1210	3	NIC	ENSMUSG00000048100.14	novel	1655	4	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	86	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTTGAGTTTGTGTTTGC	NA	False	NA	14	True	AATAAA	-23	NA	108479015	108489385	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_+_108479065_108485431_108485530_108488322
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083750	chr3	+	1191	3	NIC	ENSMUSG00000048100.14	novel	1655	4	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	74.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTTGAGTTTGTGTTTGC	NA	False	NA	14	True	AATAAA	-23	NA	108479015	108489385	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_+_108479065_108480195_108480275_108488322
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083762	chr3	+	2087	12	NIC	ENSMUSG00000027884.17	novel	2224	13	NA	NA	-9	0	combination_of_known_junctions	TRUE	canonical	3	126	junction_1	23.1716555264122	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTGGTGTGCAGTC	6623	False	NA	6	True	AATAAA	-18	NA	108561255	108586156	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_+_108561368_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083803	chr3	-	761	3	FSM	ENSMUSG00000054426.12	ENSMUST00000188260.7	739	3	-19	-3	-9	3	multi-exon	FALSE	canonical	2	5	junction_2	22	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGCTATGGTGATT	925	False	NA	-2	True	NA	NA	NA	115681762	115675226	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_115675488_115679862_115680025_115681424
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083826	chr3	+	1067	9	NNC	ENSMUSG00000033554.18	novel	1576	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	90.812220405626	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTTTTATAATCTCC	7769	False	NA	8	True	AATAAA	-18	NA	115681842	115722737	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115718901_115720345_115720450_115722157_115722227_115722480
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083830	chr3	+	585	1	NIC	ENSMUSG00000033554.18	novel	1576	8	NA	NA	40311	2	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTTTTATAATCTCCTT	6990	False	NA	10	True	AATAAA	-20	NA	115722154	115722739	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_+_115722200_115722700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083839	chr3	-	639	4	NNC	ENSMUSG00000000339.15	novel	1594	11	NA	NA	271	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	152.737247149039	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGCTGCTGCTTTTTTA	NA	False	NA	0	True	AATAAA	-20	NA	116289343	116282611	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_116282988_116286627_116286737_116287731_116287827_116289284
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083858	chr3	-	703	1	FSM	ENSMUSG00000034437.9	ENSMUST00000075650.7	492	1	-118	-93	-118	93	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGGTGCATTTTTAAGAT	NA	False	NA	NA	False	ATTAAA	-22	NA	116355193	116354490	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_116354500_116355200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083861	chr3	-	1871	11	ISM	ENSMUSG00000033439.13	ENSMUST00000041524.11	3402	12	19700	-4	0	4	3prime_fragment	FALSE	canonical	3	87	junction_7	13.8524366087703	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGTGAGGCTTTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	116388536	116374737	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083894	chr3	-	552	4	NIC	ENSMUSG00000028133.18	novel	1484	5	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	47.7702836499847	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTCATGTTTACTTT	NA	False	NA	1	True	ATTAAA	-17	NA	120965344	120949490	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_-_120949707_120949835_120949952_120950049_120950166_120965240
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083900	chr3	-	218	1	NIC	ENSMUSG00000028133.18	novel	1484	5	NA	NA	761	1	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTCATGTTTACTTT	NA	False	NA	1	True	ATTAAA	-17	NA	120949708	120949490	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_-_120949500_120949700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083901	chr3	-	1169	4	FSM	ENSMUSG00000028133.18	ENSMUST00000039761.12	1145	4	-1	-23	0	1	multi-exon	FALSE	canonical	3	76	junction_2	14.8548533034381	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTCATGTTTACTTT	NA	False	NA	1	True	ATTAAA	-17	NA	120965344	120949490	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_120949952_120950049_120950166_120952416_120952905_120965240
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083905	chr3	-	457	3	FSM	ENSMUSG00000028133.18	ENSMUST00000098650.4	2260	3	-7	1810	-6	-1810	multi-exon	FALSE	canonical	1	3	junction_2	1	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACTTTTAAATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	120965350	120964629	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_120964832_120964923_120965069_120965240
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083929	chr3	+	2046	7	NNC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	1	2	intron_retention	FALSE	canonical	0	0	junction_2	1943.38061692048	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAACCACAGGCTGGTTA	NA	False	NA	21	True	AATAAA	-21	NA	121220146	121251850	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_121220478_121243597_121243724_121243940_121244008_121245031_121245170_121245531_121245649_121248595_121248743_121250730
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083938	chr3	+	1213	8	NNC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	22	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1799.22883707528	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGATTACATGTGTACT	NA	False	NA	NA	False	AATAAA	-18	NA	121220167	121251599	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245170_121245531_121245649_121248595_121248743_121250730_121250881_121251437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083956	chr3	-	1405	1	NIC	ENSMUSG00000028127.11	novel	3156	19	NA	NA	8541	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATGTGCCTGACCTTTT	NA	False	NA	-1	True	ATTAAA	-22	NA	121553960	121552555	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_-_121552600_121554000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083969	chr3	+	861	3	ISM	ENSMUSG00000028124.16	ENSMUST00000176761.3	495	4	988	-682	988	-6	3prime_fragment	FALSE	canonical	3	448	junction_2	47	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAATTTAATGTGTGTGT	NA	False	NA	10	True	AATAAA	-22	NA	122056415	122060586	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_122056452_122058442_122058558_122059876
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000083990	chr3	-	846	1	ISM	ENSMUSG00000039735.17	ENSMUST00000197259.5	3553	12	24317	0	15548	0	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTACTTATCTTTTAC	NA	False	NA	1	True	AATAAA	-24	NA	122333213	122332367	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_122332400_122333200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084007	chr3	+	536	2	NNC	ENSMUSG00000054091.10	novel	1160	2	NA	NA	180	-448	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGTTATCTTT	NA	False	NA	107	True	AATAAA	-8	NA	122718031	122719385	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_122718310_122719127
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084045	chr3	-	374	3	NNC	ENSMUSG00000104960.2	novel	448	3	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	229	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTCCTGTTTCTGGAG	NA	False	NA	49	True	AATAAA	-22	NA	123301986	123301199	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_123301310_123301473_123301512_123301760
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084051	chr3	-	372	3	NNC	ENSMUSG00000104960.2	novel	448	3	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	229	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGTCCTGTTTCTGGA	NA	False	NA	48	True	AATAAA	-21	NA	123301986	123301200	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_123301301_123301465_123301512_123301760
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084075	chr3	+	1195	1	FSM	ENSMUSG00000096544.3	ENSMUST00000178993.3	331	1	-158	-706	-158	706	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACACTCTTTTAGTATAC	NA	False	NA	101	True	NA	NA	NA	124179157	124180352	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_124179200_124180400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084079	chr3	-	349	2	Antisense	novelGene_ENSMUSG00000105233.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGCCACTTCTGACTGGC	NA	False	NA	NA	False	NA	NA	NA	126244916	126241370	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr3_-_126241701_126244897
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084084	chr3	-	2126	13	FSM	ENSMUSG00000027968.12	ENSMUST00000029588.10	2121	13	-3	-2	-3	2	multi-exon	FALSE	canonical	3	466	junction_6	145.639680948108	588	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGGTTTTATTTACAAA	NA	False	NA	1	True	AATAAA	-19	NA	127347001	127330360	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346831
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084114	chr3	-	662	1	Intergenic	novelGene_281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCATTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	129267086	129266424	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr3_-_129266400_129267100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084143	chr3	+	252	1	ISM	ENSMUSG00000105960.2	ENSMUST00000199846.2	3871	5	7890	1985	7890	-1985	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATCCCTGTTTGCTTTG	1836	False	NA	16	True	NA	NA	NA	129555296	129555548	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_129555300_129555500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084153	chr3	-	302	1	Genic_Genomic	ENSMUSG00000028010.17	novel	NA	NA	NA	NA	462	1	mono-exon	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATTGAACGGAACCTAT	NA	False	NA	0	True	AATAAA	-23	NA	129618861	129618559	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr3_-_129618600_129618900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084166	chr3	-	993	6	NNC	ENSMUSG00000028010.17	novel	1271	7	NA	NA	78	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	705.777982087852	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTTATTGAACGGAACCTA	NA	False	NA	-1	True	AATAAA	-22	NA	129624503	129618560	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_129618859_129619196_129619256_129620462_129620624_129622553_129622614_129622985_129623141_129624243
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084176	chr3	-	979	6	NNC	ENSMUSG00000028010.17	novel	1271	7	NA	NA	78	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	705.777982087852	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACGTTTATTGAACGGAA	NA	False	NA	-5	True	AATAAA	-18	NA	129624503	129618564	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_129618859_129619196_129619256_129620472_129620624_129622553_129622614_129622985_129623141_129624243
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084187	chr3	-	173	1	Intergenic	novelGene_282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTCTTAA	9981	False	NA	-1	True	NA	NA	NA	129668459	129668286	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr3_-_129668300_129668500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084207	chr3	-	1089	4	FSM	ENSMUSG00000041084.9	ENSMUST00000043937.9	1067	4	-22	0	-22	0	multi-exon	FALSE	canonical	3	1781	junction_1	135.7063823931	5587	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGGACTTTTTGTTGT	NA	False	NA	1	True	AATAAA	-24	NA	130503115	130489560	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_130490128_130496964_130497163_130499598_130499693_130502885
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084257	chr3	-	474	5	NNC	ENSMUSG00000062006.13	novel	480	5	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3703.35985964097	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCGTTATCTGTGATTT	NA	False	NA	-12	True	AATAAA	-19	NA	130524030	130520480	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_130520609_130522392_130522501_130522699_130522800_130522877_130522952_130523966
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084260	chr3	-	463	6	NNC	ENSMUSG00000062006.13	novel	480	5	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	4162.83352537668	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCGTTATCTGTGATTT	NA	False	NA	-12	True	AATAAA	-19	NA	130523997	130520480	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523413_130523440_130523966
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084266	chr3	-	474	5	NNC	ENSMUSG00000062006.13	novel	480	5	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3532.27450624948	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCGTTATCTGTGATTT	NA	False	NA	-12	True	AATAAA	-19	NA	130524030	130520480	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_130520609_130522396_130522501_130522695_130522800_130522877_130522952_130523966
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084294	chr3	-	614	5	NNC	ENSMUSG00000062006.13	novel	624	5	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3726.79037510832	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTCCGTTATCTGTGATT	NA	False	NA	-13	True	AATAAA	-18	NA	130523974	130520481	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523765
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084367	chr3	+	2503	12	FSM	ENSMUSG00000028032.14	ENSMUST00000029666.14	2600	12	97	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	6.54292880561694	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGGTTTGTGTGCATAT	NA	False	NA	7	True	AATAAA	-18	NA	131270625	131349432	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_131270745_131285071_131285187_131288141_131288378_131288847_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781_131325051_131337346_131337577_131348724
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084381	chr3	-	1090	7	NNC	ENSMUSG00000028029.12	novel	1126	7	NA	NA	-14	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	349.68338854201	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGCTCATTTTTTGTG	NA	False	NA	-14	True	AATAAA	-33	NA	132389612	132366257	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_132366503_132373145_132373315_132377739_132377944_132379725_132379891_132380509_132380624_132382765_132382900_132389553
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084384	chr3	-	1082	7	NNC	ENSMUSG00000028029.12	novel	1126	7	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	349.99654760202	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGCTCATTTTTTGTG	NA	False	NA	-14	True	AATAAA	-33	NA	132389595	132366257	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_132366503_132373145_132373315_132377739_132377949_132379725_132379891_132380509_132380624_132382765_132382900_132389549
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084401	chr3	-	1192	8	NNC	ENSMUSG00000028029.12	novel	1126	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	420.18387617318	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTTGCTCATTTTTTG	NA	False	NA	-16	True	AATAAA	-31	NA	132389598	132366259	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_132366503_132373145_132373315_132377739_132377949_132379725_132379891_132380509_132380624_132382765_132382900_132383016_132383130_132389553
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084410	chr3	-	524	1	ISM	ENSMUSG00000028018.16	ENSMUST00000029651.11	3503	12	109550	0	23402	0	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGACTCCTCTCAGAT	NA	False	NA	-3	True	NA	NA	NA	132688036	132687512	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_132687500_132688000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084412	chr3	-	1652	4	ISM	ENSMUSG00000028018.16	ENSMUST00000161577.8	1975	10	-80	72835	-2	9563	5prime_fragment	FALSE	canonical	3	184	junction_1	16.8720676464584	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACATCCTATCTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	132797588	132777426	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_132777913_132787799_132788268_132790336_132790787_132797340
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084429	chr3	-	488	1	ISM	ENSMUSG00000040943.13	ENSMUST00000098603.8	9179	11	80221	3	7648	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTATTCTGTTGCAGA	NA	False	NA	-8	True	AATAAA	-21	NA	133169930	133169442	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_133169400_133169900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084433	chr3	-	451	2	NNC	ENSMUSG00000040943.13	novel	423	3	NA	NA	-25990	208	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAAGGGAGAAAGCAATAT	NA	False	NA	NA	False	NA	NA	NA	133212433	133194087	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_133194479_133212373
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084444	chr3	+	195	1	Intergenic	novelGene_283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTGACTTTCCTGCCT	NA	False	NA	NA	False	NA	NA	NA	134770092	134770287	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr3_+_134770100_134770300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084445	chr3	+	1725	16	ISM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	43	40557	43	-13591	5prime_fragment	FALSE	canonical	3	163	junction_13	22.2784400012409	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATCAAGAGGTAAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	134918340	134938815	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084453	chr3	+	1111	10	FSM	ENSMUSG00000028167.16	ENSMUST00000120397.8	1172	10	62	-1	0	1	multi-exon	FALSE	canonical	3	49	junction_1	10.4880884817015	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAGTTTTTTTTCTTAAG	NA	False	NA	22	True	AATAAA	-32	NA	134987043	135010188	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_134987130_134991275_134991429_134994021_134994101_134995315_134995413_134996754_134996864_135000988_135001050_135002580_135002695_135006434_135006494_135007322_135007416_135009928
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084489	chr3	+	1853	11	NIC	ENSMUSG00000050150.17	novel	2072	11	NA	NA	3	1035	combination_of_known_junctions	FALSE	canonical	3	24	junction_9	33.6964389809962	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGCTTTATTTTTGTTT	NA	False	NA	6	True	AATACA	-16	NA	135053809	135099879	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_+_135053884_135054087_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097921_135098011_135099720
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084526	chr3	+	2552	7	NNC	ENSMUSG00000078578.10	novel	2493	8	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1020.43575931505	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTTTGACAAGTGC	NA	False	NA	13	True	AATAAA	-14	NA	135144866	135172436	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_135145560_135160946_135161011_135161106_135161139_135164558_135164641_135165735_135165842_135168710_135168805_135170955
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084533	chr3	+	584	1	ISM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	29050	0	5157	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTCTTACTCAGTAAT	NA	False	NA	5	True	ATTAAA	-18	NA	135173375	135173959	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_135173400_135174000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084538	chr3	+	2437	9	ISM	ENSMUSG00000028164.16	ENSMUST00000029814.10	3675	17	59171	0	126	0	3prime_fragment	TRUE	canonical	3	121	junction_1	15.4793208830362	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCATTGAACACCATGTC	8294	False	NA	11	True	AATAAA	-19	NA	135250542	135277165	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084541	chr3	+	520	1	ISM	ENSMUSG00000028164.16	ENSMUST00000029814.10	3675	17	85274	0	7694	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCATTGAACACCATGTC	NA	False	NA	11	True	AATAAA	-19	NA	135276645	135277165	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_135276600_135277200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084566	chr3	+	1015	5	NNC	ENSMUSG00000037894.14	novel	1069	5	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6125.95067622161	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTGGTACTTTTGTTGT	NA	False	NA	32	True	ATTAAA	-21	NA	137570305	137572683	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_137570458_137570893_137570976_137571280_137571395_137571771_137571902_137572146
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084583	chr3	+	962	5	NIC	ENSMUSG00000037894.14	novel	1069	5	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_1	6367.41546371053	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTGGTACTTTTGTTGT	NA	False	NA	32	True	ATTAAA	-21	NA	137570344	137572683	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_+_137570448_137570893_137570972_137571280_137571395_137571771_137571902_137572146
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084586	chr3	+	960	5	NNC	ENSMUSG00000037894.14	novel	1069	5	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	501	junction_1	6213.99969323302	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTGGTACTTTTGTTGT	NA	False	NA	32	True	ATTAAA	-21	NA	137570344	137572683	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_137570458_137570905_137570972_137571280_137571395_137571771_137571902_137572146
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084589	chr3	+	1217	4	ISM	ENSMUSG00000037894.14	ENSMUST00000041045.14	1069	5	97	0	-7	0	intron_retention	FALSE	canonical	3	13832	junction_1	803.393220451023	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTGGTACTTTTGTTGT	NA	False	NA	32	True	ATTAAA	-21	NA	137570344	137572683	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_137570458_137570893_137570972_137571280_137571395_137571771
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084611	chr3	+	951	5	NNC	ENSMUSG00000037894.14	novel	1069	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6351.56427090996	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTGGTACTTTTGTTGT	NA	False	NA	32	True	ATTAAA	-21	NA	137570349	137572683	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_137570458_137570893_137570972_137571280_137571395_137571787_137571902_137572146
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084639	chr3	+	1348	7	FSM	ENSMUSG00000091512.6	ENSMUST00000168345.6	1295	7	-48	-5	-28	5	multi-exon	FALSE	canonical	3	124	junction_3	73.5090697351921	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTATAGGCCTCTTTT	32	False	NA	7	True	AATAAA	-27	NA	137624238	137634531	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_137624425_137624633_137624680_137625681_137625717_137630872_137630932_137632569_137632704_137633107_137633172_137633707
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084655	chr3	+	823	1	FSM	ENSMUSG00000091512.6	ENSMUST00000200656.2	2726	1	1770	133	1770	2	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCTGTATAGGCCTCT	7072	False	NA	4	True	AATAAA	-24	NA	137633705	137634528	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_137633700_137634500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084678	chr3	+	1412	9	NNC	ENSMUSG00000028138.9	novel	1604	9	NA	NA	7	77	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	714.735342189681	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTTGAACATCTTG	4931	False	NA	21	True	AATAAA	-18	NA	138148860	138161081	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_138148955_138151050_138151153_138152843_138152986_138153612_138153705_138156669_138156880_138157004_138157266_138159502_138159639_138160428_138160568_138160845
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084680	chr3	+	1412	9	NNC	ENSMUSG00000028138.9	novel	1604	9	NA	NA	-1	77	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	719.202292474099	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTTGAACATCTTG	4941	False	NA	21	True	AATAAA	-18	NA	138148870	138161081	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_138148955_138151050_138151153_138152843_138152986_138153612_138153701_138156659_138156880_138157004_138157270_138159502_138159639_138160428_138160568_138160845
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084714	chr3	+	1569	6	NIC	ENSMUSG00000028156.13	novel	856	8	NA	NA	-9	248	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	780.454482977707	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGATTTGTCCTTTATTTC	NA	False	NA	29	True	AATAAA	-30	NA	138233036	138262223	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_+_138233076_138252081_138252189_138253419_138253516_138256653_138256768_138259342_138259483_138261150
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084721	chr3	+	1523	1	NIC	ENSMUSG00000028156.13	novel	4991	8	NA	NA	4534	697	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGGTCAATTGTTGCA	NA	False	NA	14	True	AATAAA	-29	NA	138261149	138262672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_+_138261100_138262700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084760	chr3	+	1273	7	NNC	ENSMUSG00000028271.10	novel	1455	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	71.1612019759831	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGTTATAGTATTAAT	NA	False	NA	8	True	AATAAA	-15	NA	142470983	142489367	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_142471050_142477146_142477250_142483951_142484086_142485452_142485600_142485730_142485861_142487100_142487383_142488956
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084764	chr3	+	1267	7	NNC	ENSMUSG00000028271.10	novel	1455	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	68.5851052829014	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGTTATAGTATTAAT	NA	False	NA	8	True	AATAAA	-15	NA	142470986	142489367	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_142471050_142477146_142477254_142483951_142484086_142485459_142485600_142485730_142485861_142487100_142487383_142488956
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084766	chr3	+	1278	7	NNC	ENSMUSG00000028271.10	novel	1455	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	71.1612019759831	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGTTATAGTATTAAT	NA	False	NA	8	True	AATAAA	-15	NA	142470986	142489367	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_142471050_142477146_142477258_142483951_142484086_142485452_142485600_142485730_142485861_142487100_142487383_142488956
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084774	chr3	+	1282	1	FSM	ENSMUSG00000078162.7	ENSMUST00000181051.3	1002	1	-74	-206	-74	206	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGCATAGGGCATGAACA	NA	False	NA	NA	False	AATAAA	-40	NA	142668297	142669579	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_142668300_142669600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084796	chr3	+	1213	5	NNC	ENSMUSG00000037072.17	novel	1514	5	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	580.877084674546	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTCTGCTTTGTCCTTTC	NA	False	NA	25	True	AATAAA	-27	NA	144276474	144303438	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_144276561_144283346_144283515_144296382_144296437_144300661_144300712_144302583
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084815	chr3	-	1515	9	FSM	ENSMUSG00000037062.14	ENSMUST00000163279.6	3961	9	225	2221	0	281	multi-exon	TRUE	canonical	3	282	junction_5	25.8444868395563	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTGACTCATTTATTAGA	NA	False	NA	-1	True	AATAAA	-17	NA	144425871	144396825	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347_144418490_144425742
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084820	chr3	+	889	2	NNC	ENSMUSG00000085773.4	novel	1623	4	NA	NA	242	12993	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAATATGTATAGTAATT	NA	False	NA	NA	False	ATTAAA	-23	NA	144653563	144673632	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_144653831_144673010
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084874	chr3	+	214	1	Intergenic	novelGene_284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGTCTCTGTTGCCTCCC	661	False	NA	NA	False	AATAAA	-21	NA	145293407	145293621	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr3_+_145293400_145293600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084882	chr3	-	919	2	Intergenic	novelGene_285	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTTTTATGTTTCTGAG	NA	False	NA	NA	False	NA	NA	NA	145338748	145335211	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr3_-_145335690_145338307
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084886	chr3	-	2024	5	FSM	ENSMUSG00000028195.5	ENSMUST00000029846.5	2019	5	-3	-2	-3	2	multi-exon	FALSE	canonical	3	41	junction_2	2.58602010819715	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGTATGTTGTTTGG	NA	False	NA	NA	False	AATAAA	-18	NA	145355739	145352728	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_145353724_145353951_145354167_145354287_145354633_145354976_145355191_145355484
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084895	chr3	+	425	1	FSM	ENSMUSG00000105388.2	ENSMUST00000197973.2	321	1	-43	-61	-43	61	mono-exon	FALSE	NA	NA	NA	NA	NA	10433	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTCACAGAGGACCTG	8258	False	NA	NA	False	AATAAA	-36	NA	145584731	145585156	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_145584700_145585200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084909	chr3	+	1848	3	NNC	ENSMUSG00000028191.12	novel	1949	3	NA	NA	26	-72	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	167	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGTGTCTGAGTCAGAA	NA	False	NA	15	True	NA	NA	NA	145630042	145640039	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_145630275_145636167_145636450_145638705
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084925	chr3	+	1137	4	FSM	ENSMUSG00000036873.14	ENSMUST00000152783.2	514	4	-156	-467	-8	35	multi-exon	FALSE	canonical	3	74	junction_3	20.0388511535855	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTATTACTGAATGCC	NA	False	NA	25	True	AATAAA	-15	NA	145643788	145650032	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_+_145644084_145644297_145644425_145644652_145644852_145649516
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084929	chr3	+	1040	1	Genic_Genomic	ENSMUSG00000036873.14	novel	NA	NA	NA	NA	4709	5	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCATCTTGTTTATTTG	NA	False	NA	10	True	ATTAAA	-24	NA	145649549	145650589	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr3_+_145649500_145650600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084931	chr3	+	2188	6	ISM	ENSMUSG00000036825.13	ENSMUST00000106153.9	3446	14	26326	5	439	-5	3prime_fragment	FALSE	canonical	3	150	junction_2	16.9162643630324	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGCCTTGTGTTGTCCA	NA	False	NA	17	True	ATTAAA	-19	NA	146136722	146145894	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_+_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084942	chr3	+	533	3	NNC	ENSMUSG00000068523.13	novel	593	3	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1786.5	104	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGCCTCCTTACTGATG	NA	False	NA	1	True	AATAAA	-14	NA	146205590	146211302	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_+_146205770_146209014_146209155_146211088
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084962	chr3	-	1316	9	FSM	ENSMUSG00000028187.11	ENSMUST00000029838.11	1661	9	-3	348	-3	40	multi-exon	FALSE	canonical	3	514	junction_1	36.008462547018	767	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAGCTGAAAATAATTTT	NA	False	NA	37	True	ATTAAA	-25	NA	146227187	146212058	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_146212331_146212826_146212954_146213268_146213451_146213896_146213980_146217896_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226923
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000084988	chr3	-	1055	1	FSM	ENSMUSG00000047676.7	ENSMUST00000057740.7	885	1	-78	-92	-78	92	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCTATAATATCATAATTT	NA	False	NA	NA	False	AATAAA	-39	NA	149779257	149778202	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_149778200_149779300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085050	chr3	-	499	1	ISM	ENSMUSG00000052544.10	ENSMUST00000200397.5	8169	5	521209	5201	21818	1899	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGCGTTGTTTTCTCTC	NA	False	NA	-4	True	AATAAA	-24	NA	152909602	152909103	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_152909100_152909600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085080	chr3	-	1330	9	NNC	ENSMUSG00000038975.15	novel	1381	9	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	338.217755299748	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTATATAGCTTTTT	6157	False	NA	0	True	AATAAA	-17	NA	153618589	153612923	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_153613379_153613687_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618570
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085082	chr3	-	1428	10	NNC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	303.738963626156	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTATATAGCTTTTT	6157	False	NA	0	True	AATAAA	-17	NA	153618589	153612923	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr3_-_153613379_153613687_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618570
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085088	chr3	-	1349	9	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_8	331.806584285183	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTATATAGCTTTTT	6154	False	NA	0	True	AATAAA	-17	NA	153618592	153612923	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618550
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085093	chr3	-	1310	9	NIC	ENSMUSG00000038975.15	novel	1381	9	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	355	junction_5	287.890359989702	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTATATAGCTTTTT	6157	False	NA	0	True	AATAAA	-17	NA	153618589	153612923	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618570
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085096	chr3	-	1428	10	FSM	ENSMUSG00000038975.15	ENSMUST00000198350.5	1399	10	-25	-4	3	0	multi-exon	FALSE	canonical	3	72	junction_9	303.195735987477	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTATATAGCTTTTT	6157	False	NA	0	True	AATAAA	-17	NA	153618589	153612923	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618550
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085110	chr3	-	456	1	NIC	ENSMUSG00000038975.15	novel	1992	8	NA	NA	4291	0	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTATATAGCTTTTT	NA	False	NA	0	True	AATAAA	-17	NA	153613379	153612923	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_-_153612900_153613400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085112	chr3	-	1328	9	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_8	345.260771012289	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6157	False	NA	-2	True	AATAAA	-15	NA	153618589	153612925	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618550
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085121	chr3	-	1151	6	ISM	ENSMUSG00000038975.15	ENSMUST00000196266.5	1271	9	1744	-165	1696	0	intron_retention	FALSE	canonical	3	426	junction_3	241.090854243789	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	8772	False	NA	-2	True	AATAAA	-15	NA	153615974	153612925	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085168	chr3	-	1126	6	FSM	ENSMUSG00000047583.10	ENSMUST00000052774.8	4490	6	-28	3392	-19	22	multi-exon	FALSE	canonical	3	59	junction_2	5.35163526410386	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTACTTCTTCTCTGAGG	NA	False	NA	7	True	AATAAA	-43	NA	154302760	154285459	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_154285929_154293113_154293248_154296720_154296793_154299353_154299453_154300090_154300172_154302489
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085225	chr3	-	2623	12	FSM	ENSMUSG00000055436.19	ENSMUST00000072875.15	2654	12	31	0	19	0	multi-exon	TRUE	canonical	3	573	junction_1	36.7913482463625	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCTTCTGTAGAGCTG	NA	False	NA	-27	True	AATAAA	-17	NA	157737372	157716555	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085252	chr3	+	341	1	NIC	ENSMUSG00000028175.16	novel	3323	12	NA	NA	28293	-5368	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTTGCCCATATGTAC	NA	False	NA	NA	False	NA	NA	NA	159229387	159229728	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr3_+_159229400_159229700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085262	chr4	-	2405	8	FSM	ENSMUSG00000028232.14	ENSMUST00000029891.12	2690	8	49	236	0	-236	multi-exon	FALSE	canonical	3	50	junction_4	11.6233403467474	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTCTAGTAAAAATGTTAT	-6	True	NA	NA	False	AATAAA	-17	NA	3574804	3549276	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_3550580_3551751_3551892_3554353_3554415_3560498_3560693_3564092_3564258_3569363_3569753_3570320_3570373_3574703
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085263	chr4	-	2402	8	NNC	ENSMUSG00000028232.14	novel	2773	9	NA	NA	0	-236	intron_retention	FALSE	canonical	0	0	junction_6	25.7840323946937	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTCTAGTAAAAATGTTAT	-11	True	NA	NA	False	AATAAA	-17	NA	3574809	3549276	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_3550580_3551751_3551892_3554353_3554415_3560498_3560693_3564092_3564258_3569363_3569753_3570328_3570373_3574703
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085268	chr4	-	1473	5	NNC	ENSMUSG00000028232.14	novel	2773	9	NA	NA	0	9419	intron_retention	FALSE	canonical	0	0	junction_3	28.3460755661167	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTACTGTAGATAATTGC	-11	True	NA	NA	False	AATAAA	-18	NA	3574809	3559923	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_3560693_3564092_3564258_3569363_3569753_3570328_3570373_3574703
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085294	chr4	-	228	1	NIC	ENSMUSG00000028234.7	novel	3706	4	NA	NA	542	6	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTTGTTCAGGTTTTT	907	False	NA	-31	True	AATAAA	-24	NA	3834691	3834463	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_3834500_3834700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085299	chr4	-	694	3	NIC	ENSMUSG00000028234.7	novel	3706	4	NA	NA	63	5	intron_retention	FALSE	canonical	3	8309	junction_2	3.5	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTTTGTTCAGGTTTT	-4	False	NA	-32	True	AATAAA	-23	NA	3835602	3834464	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_3834684_3834935_3835292_3835483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085321	chr4	-	486	4	NNC	ENSMUSG00000028234.7	novel	3706	4	NA	NA	63	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3592.95350497176	91	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTTTTGTTCAGGTTT	-4	False	NA	-33	True	AATAAA	-22	NA	3835602	3834465	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_3834684_3834935_3835010_3835191_3835292_3835508
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085323	chr4	-	522	4	NNC	ENSMUSG00000028234.7	novel	3706	4	NA	NA	63	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3590.79418637283	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTTTTGTTCAGGTTT	-4	False	NA	-33	True	AATAAA	-22	NA	3835602	3834465	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_3834684_3834924_3835010_3835191_3835292_3835483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085327	chr4	-	496	4	NNC	ENSMUSG00000028234.7	novel	3706	4	NA	NA	63	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3918.55112112741	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTTTTGTTCAGGTTT	-4	False	NA	-33	True	AATAAA	-22	NA	3835602	3834465	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_3834684_3834935_3834991_3835187_3835292_3835483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085379	chr4	-	439	4	NNC	ENSMUSG00000028234.7	novel	3706	4	NA	NA	65	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3590.79418637283	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTTTGTTCAG	-2	True	NA	-37	True	AATAAA	-18	NA	3835600	3834469	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_3834618_3834935_3835010_3835191_3835292_3835483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085388	chr4	-	498	4	NNC	ENSMUSG00000028234.7	novel	3706	4	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3590.79418637283	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTTTGTTCAG	-4	False	NA	-37	True	AATAAA	-18	NA	3835602	3834469	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_3834664_3834924_3835010_3835191_3835292_3835483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085389	chr4	-	506	4	NNC	ENSMUSG00000028234.7	novel	3706	4	NA	NA	65	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3590.79418637283	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTTTGTTCAG	-2	True	NA	-37	True	AATAAA	-18	NA	3835600	3834469	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_3834664_3834914_3835010_3835191_3835292_3835483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085409	chr4	-	483	4	NNC	ENSMUSG00000028234.7	novel	3706	4	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3592.95350497176	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTTTGTTCAG	-1	True	NA	-37	True	AATAAA	-18	NA	3835599	3834469	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_3834684_3834935_3835010_3835191_3835271_3835483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085414	chr4	-	558	5	NNC	ENSMUSG00000028234.7	novel	3706	4	NA	NA	-13003	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3427.51458786101	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTTTGTTCAG	NA	False	NA	-37	True	AATAAA	-18	NA	3848668	3834469	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_3834684_3834935_3835010_3835191_3835292_3835483_3835623_3848637
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085420	chr4	-	404	3	NIC	ENSMUSG00000028234.7	novel	3706	4	NA	NA	66	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	4158	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTTTGTTCAG	-1	True	NA	-37	True	AATAAA	-18	NA	3835599	3834469	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_3834684_3834935_3835010_3835483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085430	chr4	-	473	3	NNC	ENSMUSG00000028234.7	novel	3706	4	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4154.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTTTGTTCAG	-1	True	NA	-37	True	AATAAA	-18	NA	3835599	3834469	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_3834684_3835148_3835292_3835483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085439	chr4	-	504	4	NNC	ENSMUSG00000028234.7	novel	3706	4	NA	NA	65	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3919.72867541733	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTTTGTTCAG	-2	True	NA	-37	True	AATAAA	-18	NA	3835600	3834469	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_3834684_3834935_3835010_3835187_3835282_3835478
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085441	chr4	-	496	4	NNC	ENSMUSG00000028234.7	novel	3706	4	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3918.55112112741	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTTTGTTCAG	-4	False	NA	-37	True	AATAAA	-18	NA	3835602	3834469	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_3834684_3834935_3834981_3835173_3835292_3835483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085442	chr4	-	585	5	NNC	ENSMUSG00000028234.7	novel	3706	4	NA	NA	-13003	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3427.51458786101	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTTTGTTCAG	NA	False	NA	-37	True	AATAAA	-18	NA	3848668	3834469	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_3834684_3834935_3835010_3835191_3835292_3835483_3835650_3848637
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085451	chr4	-	703	5	NNC	ENSMUSG00000028234.7	novel	3706	4	NA	NA	-997	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3427.51458786101	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTTTGTTCAG	NA	False	NA	-37	True	AATAAA	-18	NA	3836662	3834469	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_3834684_3834935_3835010_3835191_3835292_3835483_3835785_3836648
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085455	chr4	-	541	5	NNC	ENSMUSG00000028234.7	novel	3706	4	NA	NA	-7127	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3427.51458786101	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTTTGTTCAG	NA	False	NA	-37	True	AATAAA	-18	NA	3842792	3834469	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_3834684_3834935_3835010_3835191_3835292_3835483_3835623_3842778
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085489	chr4	-	514	4	NNC	ENSMUSG00000028234.7	novel	3706	4	NA	NA	65	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3590.79418637283	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTTTGTTCAG	-2	True	NA	-37	True	AATAAA	-18	NA	3835600	3834469	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_3834711_3834953_3835010_3835191_3835292_3835483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085552	chr4	+	787	6	NNC	ENSMUSG00000042198.13	novel	711	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	190.84695439016	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGGGGTTTTTTTT	-5	True	NA	28	True	ATTAAA	-21	NA	3938913	3943526	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_3939132_3939378_3939527_3940766_3940884_3941245_3941312_3942720_3942820_3943387
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085553	chr4	+	675	5	NNC	ENSMUSG00000042198.13	novel	672	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	174.859050380585	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGGGGTTTTTTTT	-5	True	NA	28	True	ATTAAA	-21	NA	3938913	3943526	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_3939132_3939378_3939527_3941245_3941317_3942720_3942820_3943387
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085555	chr4	+	666	5	NNC	ENSMUSG00000042198.13	novel	672	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	174.066079406644	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGGGGTTTTTTTT	-5	True	NA	28	True	ATTAAA	-21	NA	3938913	3943526	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_3939132_3939378_3939527_3941249_3941312_3942720_3942820_3943387
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085559	chr4	+	620	5	NNC	ENSMUSG00000042198.13	novel	672	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	188.64782002451	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGGGGTTTTTTTT	-5	True	NA	28	True	ATTAAA	-21	NA	3938913	3943526	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_3939132_3939428_3939527_3941245_3941312_3942720_3942820_3943387
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085567	chr4	+	1485	3	ISM	ENSMUSG00000042198.13	ENSMUST00000119307.8	889	4	-6	-22	0	0	intron_retention	FALSE	canonical	3	436	junction_2	8	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGGGGTTTTTTTT	-5	True	NA	28	True	ATTAAA	-21	NA	3938913	3943526	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_3939527_3941245_3941312_3942720
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085580	chr4	-	1913	1	ISM	ENSMUSG00000066324.3	ENSMUST00000084949.3	6543	5	27412	1547	27412	-1547	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTCTAATTCTCTGGA	NA	False	NA	-8	True	AATAAA	-19	NA	4765943	4764030	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_4764000_4765900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085583	chr4	+	353	1	ISM	ENSMUSG00000049119.15	ENSMUST00000054857.13	3210	3	155580	1048	1617	107	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAGAGCAGAATCTTTTT	NA	False	NA	9	True	ATTAAA	-23	NA	5799700	5800053	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_5799700_5800100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085606	chr4	-	1884	14	ISM	ENSMUSG00000028245.16	ENSMUST00000029910.12	3507	31	35956	-3	5673	3	3prime_fragment	FALSE	canonical	3	82	junction_12	9.26851257990121	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTTATCTTATTTAAATAA	NA	False	NA	NA	False	ATTAAA	-24	NA	6418315	6396203	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085611	chr4	-	1939	9	FSM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	0	1914	0	-1914	multi-exon	FALSE	canonical	3	29	junction_2	2.31503239718152	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCACTCTCAATTTGG	-1	True	NA	NA	False	AATAAA	-19	NA	8239041	8145275	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296_8189393_8221549_8221675_8237918_8238111_8238851
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085715	chr4	+	1844	2	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-52	739	multi-exon	FALSE	canonical	3	4269	junction_1	0	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	-4	True	NA	NA	False	AAAAAG	-13	NA	12232780	12234690	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_+_12232839_12232904
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085719	chr4	+	1912	1	FSM	ENSMUSG00000060989.9	ENSMUST00000125165.2	1119	1	-52	-741	-52	741	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTTTTGTGCATTT	-4	True	NA	NA	False	AAAAAG	-15	NA	12232780	12234692	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_12232800_12234700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085737	chr4	-	3111	7	FSM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	148	-2	-44	2	multi-exon	FALSE	canonical	3	323	junction_3	17.5752351019521	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTATATTCAAATTGT	-21	True	NA	2	True	AATAAA	-21	NA	14826439	14809504	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085767	chr4	-	1206	10	FSM	ENSMUSG00000028223.9	ENSMUST00000029877.9	2959	10	93	1660	93	-1660	multi-exon	FALSE	canonical	3	139	junction_6	12.6207745648706	255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTCTGCTCTGCTCATT	NA	False	NA	-1	True	AATAAA	-43	NA	15945414	15918899	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_15919095_15919193_15919257_15919831_15919979_15922484_15922558_15924253_15924354_15929726_15929875_15930913_15931001_15931124_15931183_15932892_15933096_15945282
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085793	chr4	+	1225	10	FSM	ENSMUSG00000028229.12	ENSMUST00000029888.4	1734	10	-144	653	-99	-653	multi-exon	FALSE	canonical	3	39	junction_9	10.5736686696625	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTCTTCACAAGTAAATAA	-9	True	NA	82	True	AATAAA	-15	NA	19575062	19606279	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_19575328_19580389_19580508_19586775_19586864_19588525_19588686_19595069_19595160_19599613_19599670_19601355_19601444_19602642_19602674_19605402_19605537_19606084
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085833	chr4	-	1013	1	Genic_Genomic	ENSMUSG00000028251.6	novel	NA	NA	NA	NA	8821	3	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGTATTTCTTTAAAGT	8804	False	NA	3	True	AATAAA	-27	NA	21758391	21757378	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_21757400_21758400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085854	chr4	+	980	1	ISM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	27913	0	1292	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGCTATGATACATACA	960	False	NA	18	True	AATAAA	-18	NA	21875495	21876475	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_21875500_21876500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085857	chr4	+	2687	7	FSM	ENSMUSG00000028247.3	ENSMUST00000029909.3	2651	7	-35	-1	-35	1	multi-exon	FALSE	canonical	3	302	junction_5	29.1414176426306	1074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGCCATTGTGCT	5102	False	NA	12	True	NA	NA	NA	21879637	21912163	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_21879797_21892808_21892936_21896554_21896708_21899057_21899158_21900263_21900507_21908482_21908643_21910418
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085872	chr4	+	310	1	Genic_Genomic	ENSMUSG00000028247.3	novel	NA	NA	NA	NA	13142	1	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGCCATTGTGCT	NA	False	NA	12	True	NA	NA	NA	21911853	21912163	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_+_21911900_21912200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085901	chr4	+	576	1	Intergenic	novelGene_286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCGAGTTTTAATTTTAG	NA	False	NA	NA	False	AAGAAA	-23	NA	24645630	24646206	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_24645600_24646200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085916	chr4	+	400	1	ISM	ENSMUSG00000028261.14	ENSMUST00000029925.10	3632	3	5018	1501	4925	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCACTTTTCTGGTTTTTT	4981	False	NA	9	True	AATAAA	-22	NA	24903100	24903500	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_24903100_24903500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085960	chr4	+	271	1	ISM	ENSMUSG00000028277.14	ENSMUST00000124992.8	3530	8	18343	2334	13031	-2334	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTGTTTACAAAAAGATT	4577	False	NA	25	True	ATTAAA	-25	NA	33049758	33050029	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_33049800_33050000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085968	chr4	-	603	2	Intergenic	novelGene_287	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGTTTCAACGTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	33193624	33192655	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_-_33193159_33193524
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085989	chr4	+	910	1	FSM	ENSMUSG00000062554.8	ENSMUST00000122336.2	381	1	-66	-463	-66	463	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGAATTGTGGGGAGCGG	NA	False	NA	NA	False	NA	NA	NA	34353976	34354886	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_34354000_34354900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085991	chr4	-	1312	2	Genic_Genomic	ENSMUSG00000082649.2	novel	454	1	NA	NA	-96668	10	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTTTTGTCTGTGTGAT	NA	False	NA	NA	False	NA	NA	NA	34486515	34389383	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_34389871_34485690
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000085992	chr4	-	1295	2	Genic_Genomic	ENSMUSG00000082649.2	novel	454	1	NA	NA	-96669	10	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTTTTGTCTGTGTGAT	NA	False	NA	NA	False	NA	NA	NA	34486516	34389383	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_34389871_34485708
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086000	chr4	-	1309	2	Genic_Genomic	ENSMUSG00000082649.2	novel	454	1	NA	NA	-96669	10	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTTTTGTCTGTGTGAT	NA	False	NA	NA	False	NA	NA	NA	34486516	34389383	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_34389961_34485784
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086005	chr4	+	728	1	FSM	ENSMUSG00000095588.2	ENSMUST00000121208.3	462	1	-42	-224	-42	224	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAAAACCCACTTCCACA	0	True	NA	27	True	AATAAA	-29	NA	34485789	34486517	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_34485800_34486500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086009	chr4	+	478	1	Genic_Genomic	ENSMUSG00000028291.8	novel	NA	NA	NA	NA	15481	1	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTGTTTCCGAATTGT	NA	False	NA	14	True	AATAAA	-15	NA	34566431	34566909	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_+_34566400_34566900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086044	chr4	+	182	1	NIC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	12271	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTGTAGTAGTGTGT	NA	False	NA	9	True	AATAGA	-24	NA	34659982	34660164	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_34660000_34660200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086070	chr4	+	612	2	NNC	ENSMUSG00000028298.11	novel	687	4	NA	NA	12609	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	0	34	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGATGTGCCGCCTTCT	1243	False	NA	NA	False	AATAAA	-18	NA	34906396	34907370	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_34906704_34907065
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086077	chr4	-	2068	4	ISM	ENSMUSG00000028300.15	ENSMUST00000108126.8	2644	10	28750	-6	9046	4	3prime_fragment	FALSE	canonical	3	79	junction_3	11.0252236056942	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAGTTCATTATTTAG	9767	False	NA	1	True	AATAAA	-22	NA	35197084	35191280	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_35193069_35193184_35193295_35194136_35194195_35196972
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086087	chr4	+	243	2	ISM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	293	34545	293	-5567	5prime_fragment	FALSE	canonical	3	304	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCAGGAAAGAGGTTCTT	-33	True	NA	NA	False	NA	NA	NA	40143373	40163793	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_40143542_40163718
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086093	chr4	-	2459	9	FSM	ENSMUSG00000040296.16	ENSMUST00000137903.8	3533	9	2	1072	2	0	multi-exon	FALSE	canonical	3	61	junction_4	6.68487097856047	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTCCAATTCATTCCCT	-7	True	NA	-10	True	AATAAA	-22	NA	40220598	40204848	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_40206107_40208450_40208595_40208770_40208923_40209878_40210050_40211549_40211641_40213730_40213880_40216354_40216491_40217329_40217488_40220398
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086108	chr4	-	707	4	FSM	ENSMUSG00000071014.11	ENSMUST00000095128.10	659	4	-48	0	-48	0	multi-exon	FALSE	canonical	3	2502	junction_3	28.8251433455046	13958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTAGCTACTTTTTTCT	NA	False	NA	63	True	AGTAAA	-20	NA	40279469	40270590	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_40270848_40272809_40272855_40277652_40277746_40279157
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086123	chr4	-	186	1	ISM	ENSMUSG00000071014.11	ENSMUST00000095128.10	659	4	8574	71	8562	3	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTCCGTGTTACTGTC	8564	False	NA	-8	True	AATAAA	-20	NA	40270847	40270661	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_40270700_40270800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086128	chr4	-	572	4	NNC	ENSMUSG00000071014.11	novel	659	4	NA	NA	8	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1196.294649695	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTCCGTGTTACTGTC	10	True	NA	-8	True	AATAAA	-20	NA	40279401	40270661	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_40270848_40272805_40272855_40277652_40277746_40279157
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086145	chr4	-	1391	8	FSM	ENSMUSG00000028411.16	ENSMUST00000129021.9	1378	8	-10	-3	-3	3	multi-exon	FALSE	canonical	3	41	junction_6	41.4453168128111	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGATTGTGTAGTATCTG	-2	True	NA	-5	True	AATATA	-20	NA	40703197	40686238	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695137_40695376_40695419_40697216_40697354_40703136
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086146	chr4	-	1399	8	FSM	ENSMUSG00000028411.16	ENSMUST00000030119.10	5250	8	-6	3857	-6	3	multi-exon	FALSE	canonical	3	144	junction_6	8.59757915618919	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGATTGTGTAGTATCTG	-5	True	NA	-5	True	AATATA	-20	NA	40703200	40686238	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695137_40695376_40695424_40697216_40697354_40703136
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086184	chr4	+	1287	8	NIC	ENSMUSG00000028410.14	novel	3376	9	NA	NA	-26	-794	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	994.047980610142	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGCCCTGTATGTAT	-4	True	NA	12	True	AATAAA	-18	NA	40722532	40733106	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_40722634_40723702_40723845_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086222	chr4	-	109	1	ISM	ENSMUSG00000028413.14	ENSMUST00000030121.13	3983	6	49295	0	49295	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTCTTTTCTTTTTTG	1862	False	NA	-1	True	AATAAA	-18	NA	40804710	40804601	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_40804600_40804700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086239	chr4	-	1140	8	NNC	ENSMUSG00000028416.14	novel	1348	7	NA	NA	-14	-16	at_least_one_novel_splicesite	FALSE	canonical	1	50	junction_7	707.264347428072	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGACTTGTGTTTTCTCAT	1	True	NA	-25	True	AAAAAG	-21	NA	40948308	40936416	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721_40948068_40948271
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086271	chr4	+	1562	5	FSM	ENSMUSG00000036241.4	ENSMUST00000040008.4	3600	5	278	1760	278	584	multi-exon	FALSE	canonical	3	428	junction_4	37.5857353260516	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTGGTTGCTATTTATT	-11	True	NA	36	True	AATAAA	-25	NA	41136020	41191620	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_41136247_41174040_41174128_41183244_41183343_41189151_41189287_41190604
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086312	chr4	+	844	3	NNC	ENSMUSG00000028443.7	novel	845	3	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_1	88.5	44	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGATGCTTTCTTGGAC	1	True	NA	32	True	AATAAA	-28	NA	41465147	41480926	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_41465181_41477517_41477648_41480245
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086329	chr4	+	198	1	Intergenic	novelGene_288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCTTCACAAACAAGCCCA	NA	False	NA	NA	False	NA	NA	NA	41485040	41485238	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_41485000_41485200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086352	chr4	-	812	7	NNC	ENSMUSG00000028447.12	novel	973	7	NA	NA	0	-146	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_4	335.582081365101	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGGCCTGCTGATGT	-9	True	NA	NA	False	AATAAA	-21	NA	41723163	41714943	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_41715260_41715395_41715456_41716395_41716455_41717356_41717433_41719836_41719924_41720782_41720868_41723034
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086359	chr4	-	313	1	NIC	ENSMUSG00000028447.12	novel	885	6	NA	NA	7878	-149	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCTGTTGGCCTGCTGA	7895	False	NA	NA	False	AATAAA	-18	NA	41715259	41714946	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_41714900_41715300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086361	chr4	-	967	8	NNC	ENSMUSG00000028447.12	novel	973	7	NA	NA	0	-149	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	400.02408090779	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCTGTTGGCCTGCTGA	-9	True	NA	NA	False	AATAAA	-18	NA	41723163	41714946	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_41715260_41715395_41715456_41716395_41716455_41716968_41717119_41717356_41717441_41719836_41719924_41720782_41720868_41723034
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086382	chr4	-	1563	4	NIC	ENSMUSG00000036078.17	novel	1640	4	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	41	junction_2	247.10906274131	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTTTCCTTATGTGTCTA	-7	True	NA	NA	False	AATAAA	-16	NA	41741330	41738493	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_41739581_41740549_41740643_41740822_41740977_41741101
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086387	chr4	-	1092	1	NIC	ENSMUSG00000036078.17	novel	1640	4	NA	NA	1463	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTTTCCTTATGTGTCTA	5521	False	NA	NA	False	AATAAA	-16	NA	41739585	41738493	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_41738500_41739600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086401	chr4	-	1457	4	NNC	ENSMUSG00000036078.17	novel	1640	4	NA	NA	28	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	266.241744785949	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGTTTCCTTATGTGTC	-3	True	NA	NA	False	AATAAA	-14	NA	41741292	41738495	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_41739581_41740549_41740643_41740888_41740977_41741101
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086408	chr4	+	1344	11	NNC	ENSMUSG00000036073.19	novel	1595	11	NA	NA	237	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	94.6033826033721	539	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTAGTGTGGACTCTTAC	-3	True	NA	39	True	AATAAA	-40	NA	41755489	41758702	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_41755653_41755960_41756131_41756346_41756423_41756512_41756562_41756681_41756812_41756938_41757000_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086413	chr4	+	1337	11	NNC	ENSMUSG00000036073.19	novel	1595	11	NA	NA	245	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	117.361152005253	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGTAGTGTGGACTCTT	5	True	NA	37	True	AATAAA	-38	NA	41755497	41758700	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_41755653_41755960_41756131_41756343_41756423_41756512_41756562_41756681_41756812_41756938_41757000_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086438	chr4	-	620	6	FSM	ENSMUSG00000073888.14	ENSMUST00000108037.9	590	6	-30	0	-2	0	multi-exon	FALSE	canonical	3	53	junction_3	16.7020956768904	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTCTCTTTTATTTCA	-2	True	NA	5	True	AATAAA	-28	NA	41774172	41769466	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_41769655_41769843_41769977_41771137_41771236_41773464_41773525_41773735_41773804_41774099
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086444	chr4	-	587	6	NNC	ENSMUSG00000073888.14	novel	590	6	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	32.8182875848208	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAAAAACTTCCGTCTC	3	True	NA	-5	True	AATAAA	-18	NA	41774167	41769476	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_41769655_41769843_41769977_41771137_41771218_41773464_41773525_41773735_41773804_41774099
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086470	chr4	-	691	1	Genic_Genomic	ENSMUSG00000028452.8	novel	NA	NA	NA	NA	5184	16	mono-exon	FALSE	NA	NA	NA	NA	NA	2487	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGCCTCATCTTTTTCTG	NA	False	NA	1	True	AATAAA	-34	NA	42980637	42979946	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_42979900_42980600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086496	chr4	-	1237	10	NNC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	31	7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	991.774553732903	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCTCATTGATTGGGGG	-3	True	NA	0	True	AATAAA	-23	NA	43031405	43028018	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_43028294_43028937_43029067_43029278_43029356_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086498	chr4	-	1235	10	NNC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	31	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	993.318568122925	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCTCATTGATTGGGGG	-3	True	NA	0	True	AATAAA	-23	NA	43031405	43028018	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030146_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086509	chr4	-	1260	10	NNC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	7	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	976.214811414317	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCTCATTGATTGGGGG	2	True	NA	0	True	AATAAA	-23	NA	43031429	43028018	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029634_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086545	chr4	+	805	6	NNC	ENSMUSG00000028461.13	novel	817	6	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	134.197764511932	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTCCTCTGTGCTT	-21	True	NA	14	True	AGTAAA	-45	NA	43493366	43495921	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_43493537_43493607_43493760_43495194_43495256_43495341_43495433_43495508_43495622_43495703
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086547	chr4	+	887	5	FSM	ENSMUSG00000028461.13	ENSMUST00000107922.3	865	5	-22	0	5	0	multi-exon	FALSE	canonical	3	315	junction_4	11.5433963806152	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTCCTCTGTGCTT	-21	True	NA	14	True	AGTAAA	-45	NA	43493366	43495921	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_43493537_43493607_43493760_43495194_43495256_43495341_43495433_43495508
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086641	chr4	+	1086	5	FSM	ENSMUSG00000028478.19	ENSMUST00000107845.4	1031	5	-42	-13	1	13	multi-exon	FALSE	canonical	3	59	junction_1	565.255860208455	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATTGATCTGAAAATGG	8197	False	NA	34	True	AATAAA	-34	NA	44012643	44032859	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_44013003_44018812_44018851_44019873_44019992_44025448_44025561_44032400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086647	chr4	+	1085	5	NNC	ENSMUSG00000028478.19	novel	1079	5	NA	NA	7	13	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_4	560.104175578079	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATTGATCTGAAAATGG	8203	False	NA	34	True	AATAAA	-34	NA	44012649	44032859	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_44013009_44018812_44018851_44019873_44019992_44025448_44025565_44032405
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086672	chr4	+	1043	5	NNC	ENSMUSG00000028478.19	novel	1710	6	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	562.693244583583	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	-6	True	NA	21	True	AATAAA	-21	NA	44012671	44032846	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_44013009_44018812_44018851_44019873_44019992_44025448_44025561_44032408
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086682	chr4	+	449	1	NIC	ENSMUSG00000028478.19	novel	1710	6	NA	NA	19712	0	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	31	False	NA	21	True	AATAAA	-21	NA	44032397	44032846	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_44032400_44032800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086721	chr4	+	1068	8	ISM	ENSMUSG00000035637.15	ENSMUST00000045078.13	1280	9	2	1536	2	188	5prime_fragment	FALSE	canonical	3	277	junction_3	35.5045268743498	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGAAGTGGATGCGTTT	-29	True	NA	NA	False	AATAGA	-39	NA	44981396	44989198	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_44981535_44982878_44983010_44983873_44983947_44984429_44984547_44985306_44985396_44986285_44986391_44987215_44987352_44988919
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086726	chr4	+	842	5	ISM	ENSMUSG00000035637.15	ENSMUST00000045078.13	1280	9	3856	33	3751	-33	3prime_fragment	FALSE	canonical	3	317	junction_2	25.7147817412476	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCCTATGACTTGGGG	3769	False	NA	15	True	ATTAAA	-18	NA	44985250	44990701	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_44985396_44986285_44986391_44987215_44987352_44988919_44989051_44990376
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086738	chr4	-	637	2	FSM	ENSMUSG00000078713.9	ENSMUST00000107807.2	442	2	-7	-188	-1	1	multi-exon	FALSE	canonical	3	56	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTTGTGTTTTTAATC	-17	True	NA	NA	False	AATAAA	-19	NA	45108115	45105206	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_45105645_45107916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086751	chr4	-	719	3	NNC	ENSMUSG00000078713.9	novel	679	3	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGGTTTTGTGTTTTTAA	-15	True	NA	NA	False	AATAAA	-17	NA	45108113	45105208	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_45105645_45107548_45107631_45107912
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086760	chr4	+	1415	9	FSM	ENSMUSG00000035601.10	ENSMUST00000044673.9	2064	9	7	642	7	347	multi-exon	FALSE	canonical	3	203	junction_1	41.8103979292233	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCGATTTCCACCAGCT	NA	False	NA	12	True	CATAAA	-21	NA	45297133	45315489	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_45297196_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086791	chr4	-	1946	3	FSM	ENSMUSG00000045973.19	ENSMUST00000116341.4	4438	3	0	2492	0	826	multi-exon	FALSE	canonical	3	68	junction_2	5.5	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTTAATGCAACCCCAAG	-22	True	NA	NA	False	AATAAA	-26	NA	45408766	45398414	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_45400180_45404726_45404836_45408694
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086804	chr4	+	203	1	ISM	ENSMUSG00000035561.6	ENSMUST00000044384.5	2298	2	5380	0	5281	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTATCACTGTTTTCCTT	5297	False	NA	12	True	ATTAAA	-26	NA	45804401	45804604	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_45804400_45804600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086805	chr4	-	153	1	ISM	ENSMUSG00000035495.16	ENSMUST00000107772.8	3726	10	23577	0	17025	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGTGGGAAGAGTGCTCT	NA	False	NA	-3	True	AATAAA	-25	NA	46114898	46114745	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_46114700_46114900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086813	chr4	+	293	1	ISM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	33498	0	6915	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGGAGTCATGGTTTAT	6038	False	NA	21	True	AATAAA	-21	NA	46172110	46172403	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_46172100_46172400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086889	chr4	-	3029	2	FSM	ENSMUSG00000039740.7	ENSMUST00000044148.3	3021	2	-8	0	-8	0	multi-exon	FALSE	canonical	3	118	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCAGTTTATGGTTGCG	-25	True	NA	-2	True	AATAAA	-15	NA	47474341	47469832	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_47472459_47473938
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086914	chr4	+	604	4	FSM	ENSMUSG00000053317.12	ENSMUST00000137461.8	430	4	-62	-112	44	-2	multi-exon	FALSE	canonical	0	0	junction_1	1134.39528677911	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTTGCCTGTGCTTTA	22	True	NA	NA	False	AATAAA	-23	NA	47474701	47483240	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_47474840_47474911_47475010_47480130_47480233_47482974
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086922	chr4	+	268	1	ISM	ENSMUSG00000053317.12	ENSMUST00000065678.6	564	4	8317	0	8027	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGCCTGTGCTTTATT	2937	False	NA	NA	False	AATAAA	-25	NA	47482974	47483242	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_47483000_47483200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000086932	chr4	-	2675	12	FSM	ENSMUSG00000028343.11	ENSMUST00000030028.5	2624	12	-61	10	-61	-10	multi-exon	TRUE	canonical	3	625	junction_9	43.7020339182862	277	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAATAACTATCAGCTT	NA	False	NA	NA	False	AATAAA	-19	NA	48279619	48193332	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48279383
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087003	chr4	+	1637	11	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	0	29686	0	0	5prime_fragment	FALSE	canonical	3	347	junction_1	42.0171393600278	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTCTTAAATGTCCTTA	-19	True	NA	21	True	AAGAAA	-37	NA	52439242	52458574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087007	chr4	+	2191	4	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	39152	0	39126	0	3prime_fragment	FALSE	canonical	3	424	junction_1	46.7641838257538	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAGTACTACAGTTT	NA	False	NA	21	True	ATTAAA	-21	NA	52478394	52488260	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_52478513_52481669_52481831_52484039_52484188_52486496
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087009	chr4	+	1668	1	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	47350	0	47324	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAGTACTACAGTTT	NA	False	NA	21	True	ATTAAA	-21	NA	52486592	52488260	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_52486600_52488300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087013	chr4	+	188	1	Intergenic	novelGene_289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGTTTGTGGCTGAATC	NA	False	NA	NA	False	NA	NA	NA	52517961	52518149	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_52518000_52518100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087015	chr4	+	1554	6	FSM	ENSMUSG00000015247.11	ENSMUST00000015391.10	1552	6	9	-11	9	11	multi-exon	FALSE	canonical	3	527	junction_3	32.5785205311721	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCTTCTATATTTATC	NA	False	NA	21	True	AATAAA	-32	NA	53011888	53022071	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_53012048_53015014_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087025	chr4	+	1412	6	NNC	ENSMUSG00000015247.11	novel	444	2	NA	NA	420	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	210.438589617019	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATCAAGTGAGTCTT	422	False	NA	10	True	AATAAA	-21	NA	53012369	53022060	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_53012398_53015014_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087051	chr4	+	2761	4	ISM	ENSMUSG00000028412.18	ENSMUST00000107651.9	4382	16	112914	18	17973	-18	3prime_fragment	FALSE	canonical	3	334	junction_3	24.9443825784929	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGTTTAGAAATTATG	NA	False	NA	15	True	AATAAA	-15	NA	53553584	53567800	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_53553624_53560914_53561152_53563140_53563222_53565396
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087090	chr4	-	1699	3	ISM	ENSMUSG00000003032.9	ENSMUST00000107619.3	3029	5	2092	0	1396	0	3prime_fragment	FALSE	canonical	3	1140	junction_2	58	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACAATCTCTTTGTTTTTT	2952	False	NA	-7	True	AATAAA	-21	NA	55530374	55527142	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_55528301_55529717_55529883_55529998
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087102	chr4	-	270	1	ISM	ENSMUSG00000038816.15	ENSMUST00000045142.15	3664	19	53984	0	3115	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACCGACTGGCTTAAT	NA	False	NA	-6	True	AATAAA	-21	NA	56811204	56810934	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_56810900_56811200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087104	chr4	-	1257	5	FSM	ENSMUSG00000038816.15	ENSMUST00000131231.2	654	5	52	-655	52	-550	multi-exon	FALSE	canonical	3	19	junction_4	112.62548557054	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTAAACCTTTTCTTGG	NA	False	NA	1	True	AATAAA	-24	NA	56814267	56811484	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56814169
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087135	chr4	-	221	1	NIC	ENSMUSG00000028367.6	novel	1051	5	NA	NA	12437	-381	mono-exon	FALSE	NA	NA	NA	NA	NA	583	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGATGTGTTTTAATATAA	9552	False	NA	0	True	AATAAA	-28	NA	57943974	57943753	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_57943800_57944000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087140	chr4	-	605	5	NNC	ENSMUSG00000028367.6	novel	1051	5	NA	NA	59	-383	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	2063.26585780893	283	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGATGTGTTTTAATAT	-18	True	NA	-2	True	AATAAA	-26	NA	57956352	57943755	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_57943968_57945146_57945213_57950838_57950899_57951796_57951898_57956186
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087150	chr4	-	702	6	NNC	ENSMUSG00000028367.6	novel	1051	5	NA	NA	82	-384	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	2303.51111132549	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGATGTGTTTTAATA	5	True	NA	-3	True	AATAAA	-25	NA	57956329	57943756	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_57943968_57945146_57945213_57949965_57950083_57950838_57950899_57951796_57951902_57956186
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087163	chr4	-	519	4	NIC	ENSMUSG00000028367.6	novel	1051	5	NA	NA	82	-384	combination_of_known_splicesites	FALSE	canonical	3	163	junction_1	2159.63798406636	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGATGTGTTTTAATA	5	True	NA	-3	True	AATAAA	-25	NA	57956329	57943756	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_57943968_57950838_57950899_57951796_57951902_57956186
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087166	chr4	-	589	5	NNC	ENSMUSG00000028367.6	novel	1051	5	NA	NA	82	-384	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2050.14749469398	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGATGTGTTTTAATA	5	True	NA	-3	True	AATAAA	-25	NA	57956329	57943756	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_57943968_57945146_57945213_57950834_57950899_57951796_57951902_57956186
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087168	chr4	-	573	5	NNC	ENSMUSG00000028367.6	novel	1051	5	NA	NA	82	-384	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2063.26585780893	123	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGATGTGTTTTAATA	5	True	NA	-3	True	AATAAA	-25	NA	57956329	57943756	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_57943968_57945146_57945213_57950838_57950899_57951796_57951890_57956186
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087172	chr4	-	530	4	NNC	ENSMUSG00000028367.6	novel	1051	5	NA	NA	112	-384	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2198.06702961185	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGATGTGTTTTAATA	136	False	NA	-3	True	AATAAA	-25	NA	57956299	57943756	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_57943968_57945146_57945213_57951761_57951902_57956186
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087196	chr4	-	507	4	NNC	ENSMUSG00000028367.6	novel	1051	5	NA	NA	120	-384	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2236.39133923878	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGATGTGTTTTAATA	-1	True	NA	-3	True	AATAAA	-25	NA	57956291	57943756	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_57943987_57950831_57950899_57951796_57951902_57956186
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087211	chr4	-	493	1	Genic_Genomic	ENSMUSG00000038668.15	novel	NA	NA	NA	NA	63659	3	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTTCTGGTCTGTGC	8374	False	NA	-2	True	AATAAA	-25	NA	58435744	58435251	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_58435300_58435700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087216	chr4	-	480	1	Genic_Genomic	ENSMUSG00000028378.7	novel	NA	NA	NA	NA	21204	3	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGTGCCTTCTCTTAT	NA	False	NA	NA	False	NA	NA	NA	58965915	58965435	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_58965400_58965900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087232	chr4	-	1179	10	NNC	ENSMUSG00000028378.7	novel	2296	10	NA	NA	39	-1078	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	133.777962347602	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGTGATAGAGAATGAAAT	-3	True	NA	-5	True	AATAAA	-24	NA	58987080	58966516	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_58966764_58968758_58968878_58970990_58971096_58973530_58973691_58975860_58975979_58978013_58978182_58981826_58981884_58982879_58982926_58984743_58984860_58987037
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087245	chr4	+	568	2	ISM	ENSMUSG00000070972.14	ENSMUST00000153467.3	2393	5	17201	748	17201	309	3prime_fragment	FALSE	canonical	3	112	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAAGTGTTTCTTCTT	2704	False	NA	13	True	TTTAAA	-6	NA	59020393	59022992	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_59020530_59022560
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087257	chr4	-	778	3	ISM	ENSMUSG00000038578.16	ENSMUST00000107544.2	3220	17	88642	14453	12991	3	internal_fragment	FALSE	canonical	3	68	junction_2	8.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGCATTTACCTTTCT	1747	False	NA	NA	False	NA	NA	NA	59349991	59329206	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_59329722_59332936_59333034_59349825
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087262	chr4	-	229	1	Intergenic	novelGene_290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATGAATTTTTACATTT	NA	False	NA	NA	False	AATAAA	-18	NA	59368028	59367799	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_-_59367800_59368000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087267	chr4	+	196	1	Intergenic	novelGene_291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAGATACTAGTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	59570744	59570940	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_59570700_59570900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087279	chr4	-	1498	4	FSM	ENSMUSG00000038544.15	ENSMUST00000107526.8	1438	4	-59	-1	-1	1	multi-exon	FALSE	canonical	3	138	junction_3	91.8416511659546	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTTTGTAAGGATCCTG	-29	True	NA	-5	True	ATTAAA	-19	NA	59783867	59771295	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59783727
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087287	chr4	-	1396	4	NNC	ENSMUSG00000038544.15	novel	1654	3	NA	NA	-7	-142	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	109.77552854196	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGGTTATTCAGTTTG	-18	True	NA	-3	True	NA	NA	NA	59783856	59774229	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_59775313_59775446_59775550_59782253_59782335_59783727
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087292	chr4	+	1178	3	ISM	ENSMUSG00000028385.15	ENSMUST00000145199.8	2303	6	7794	662	7708	-662	3prime_fragment	FALSE	canonical	3	102	junction_2	7	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGTGCCCGCTGACTGT	1694	False	NA	NA	False	NA	NA	NA	59892487	59899871	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_59892549_59894524_59894678_59898907
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087294	chr4	+	1046	2	ISM	ENSMUSG00000028385.15	ENSMUST00000143185.2	713	4	7708	-955	7708	955	3prime_fragment	FALSE	canonical	3	116	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGACCTCAGAGTTAGCAT	1694	False	NA	NA	False	TTTAAA	-10	NA	59892487	59895509	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_59892549_59894524
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087306	chr4	+	1847	4	FSM	ENSMUSG00000066152.12	ENSMUST00000084530.9	1820	4	-27	0	-27	0	multi-exon	FALSE	canonical	3	73	junction_3	15.369522511198	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGTTGGTCCGTTTC	NA	False	NA	9	True	AATAAA	-20	NA	62204658	62216648	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_62204812_62210868_62210936_62214123_62214314_62215211
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087314	chr4	+	1321	1	ISM	ENSMUSG00000066152.12	ENSMUST00000084530.9	1820	4	10642	0	5544	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGTTGGTCCGTTTC	7290	False	NA	9	True	AATAAA	-20	NA	62215327	62216648	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_62215300_62216600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087323	chr4	+	3758	5	FSM	ENSMUSG00000066150.13	ENSMUST00000084526.12	3718	5	-40	0	-40	0	multi-exon	FALSE	canonical	3	753	junction_3	40.1932830209228	492	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGTCTGTCTACACACT	NA	False	NA	23	True	AATAAA	-23	NA	62278923	62310006	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_62279081_62303728_62303916_62304327_62304401_62306103_62306273_62306834
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087355	chr4	-	1368	11	FSM	ENSMUSG00000028391.17	ENSMUST00000030087.14	1440	11	-24	96	-15	-96	multi-exon	FALSE	canonical	3	150	junction_2	19.4548194543152	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGCTTTGTGTTTTTC	NA	False	NA	0	True	NA	NA	NA	62389148	62371966	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087411	chr4	+	1033	3	NNC	ENSMUSG00000039105.7	novel	1135	3	NA	NA	48	-49	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2124.5	21	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCTGGCTCCTTTTTTT	NA	False	NA	NA	False	AGTAAA	-19	NA	63463056	63468938	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_63463237_63466826_63466923_63468181
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087437	chr4	+	713	1	FSM	ENSMUSG00000082998.4	ENSMUST00000117230.2	597	1	-25	-91	-25	91	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGGAAACAATTCCCTTA	NA	False	NA	NA	False	ATTAAA	-30	NA	69610189	69610902	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_69610200_69610900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087440	chr4	-	893	2	Genic_Genomic	ENSMUSG00000046341.6	novel	450	1	NA	NA	-92	456	multi-exon	FALSE	canonical	2	25	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAGGGAAGGATGTGAT	NA	False	NA	NA	False	AATAAA	-43	NA	69844408	69843410	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_69844191_69844295
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087442	chr4	-	896	2	Genic_Genomic	ENSMUSG00000046341.6	novel	450	1	NA	NA	-92	456	multi-exon	FALSE	canonical	2	29	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAGGGAAGGATGTGAT	NA	False	NA	NA	False	AATAAA	-43	NA	69844408	69843410	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_69844194_69844295
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087451	chr4	-	963	1	FSM	ENSMUSG00000046341.6	ENSMUST00000120560.2	450	1	-92	-421	-92	421	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTGCTGTTAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-8	NA	69844408	69843445	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_69843400_69844400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087454	chr4	-	251	1	ISM	ENSMUSG00000008305.19	ENSMUST00000074216.14	4369	20	82864	663	2679	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTTCCTCCTTGACTC	NA	False	NA	81	True	AGTAAA	-18	NA	72036292	72036041	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_72036000_72036300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087490	chr4	-	387	1	NIC	ENSMUSG00000038172.15	novel	8831	20	NA	NA	-7026	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAAATTCAATTTTCCAT	NA	False	NA	NA	False	AATAAA	-22	NA	83158433	83158046	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_83158000_83158400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087518	chr4	-	351	2	NNC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	3274	22172	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGCTGGGTGGTGGTG	NA	False	NA	NA	False	NA	NA	NA	83375255	83351744	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_83352058_83375217
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087521	chr4	-	2621	1	Genic_Genomic	ENSMUSG00000028484.17	novel	NA	NA	NA	NA	3213	1221	mono-exon	FALSE	NA	NA	NA	NA	NA	586	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTTTATCTGTCATCT	NA	False	NA	-2	True	AATAAA	-20	NA	83375316	83372695	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_83372700_83375300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087524	chr4	-	1989	7	ISM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	22831	0	1336	0	3prime_fragment	FALSE	canonical	3	958	junction_5	83.2986594529988	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTATTAGTAAGTTATTAT	8136	False	NA	-4	True	ATTAAA	-16	NA	83381865	83373916	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087527	chr4	-	423	2	ISM	ENSMUSG00000028484.17	ENSMUST00000126706.8	463	3	1251	0	1251	0	3prime_fragment	FALSE	canonical	3	78	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTTTAGGTATTTTT	8051	False	NA	94	True	AATAAA	-19	NA	83381950	83380107	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_83380412_83381831
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087532	chr4	-	999	4	ISM	ENSMUSG00000028484.17	ENSMUST00000107215.9	1898	11	19700	0	-1715	0	3prime_fragment	FALSE	canonical	3	354	junction_1	695.584326703496	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTTTAGGTATTTTT	5006	False	NA	94	True	AATAAA	-19	NA	83384995	83380107	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_83380711_83381831_83381951_83383161_83383388_83384944
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087574	chr4	-	403	4	NNC	ENSMUSG00000028494.13	novel	996	3	NA	NA	-13	478	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	281.127491837185	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATT	NA	False	NA	NA	False	NA	NA	NA	86588236	86585423	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_86585520_86586603_86586800_86586886_86586943_86588181
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087582	chr4	-	1461	5	NNC	ENSMUSG00000028495.15	novel	878	5	NA	NA	-27	559	at_least_one_novel_splicesite	FALSE	canonical	3	114	junction_2	9053.20085315133	2895	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCTGCTCTTGATTTTTG	NA	False	NA	-2	True	AGTAAA	-20	NA	86775676	86772337	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_86773193_86774103_86774248_86774382_86774594_86774964_86775097_86775557
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087598	chr4	-	862	5	NNC	ENSMUSG00000028495.15	novel	878	5	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9098.38236652538	152	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTTTCATTAATAGTGT	NA	False	NA	NA	False	AATAAA	-21	NA	86775641	86772896	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_86773193_86774103_86774243_86774382_86774594_86774964_86775097_86775557
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087686	chr4	+	591	1	NIC	ENSMUSG00000038007.15	novel	2943	2	NA	NA	1340	130	mono-exon	FALSE	NA	NA	NA	NA	NA	333	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGGTGTGGTTCAAGAT	5460	False	NA	23	True	NA	NA	NA	86850267	86850858	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_86850300_86850900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087703	chr4	+	2555	8	FSM	ENSMUSG00000062937.8	ENSMUST00000058030.10	2797	8	247	-5	247	5	multi-exon	FALSE	canonical	3	513	junction_1	29.2609651521041	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATTATACTTGAGCGTT	5295	False	NA	NA	False	NA	NA	NA	89055605	89099323	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_89055762_89066425_89066513_89070245_89070305_89074682_89074851_89089364_89089468_89090381_89090622_89095039_89095163_89097704
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087706	chr4	+	2558	8	NNC	ENSMUSG00000062937.8	novel	2797	8	NA	NA	248	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	201.206666015268	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATTATACTTGAGCGTT	5296	False	NA	NA	False	NA	NA	NA	89055606	89099323	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_89055762_89066425_89066513_89070245_89070305_89074682_89074851_89089364_89089472_89090381_89090622_89095039_89095163_89097704
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087729	chr4	-	1898	1	ISM	ENSMUSG00000008489.19	ENSMUST00000107110.8	3671	6	119371	3	1919	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGTGTATCTTTAAATA	NA	False	NA	-1	True	AATAAA	-17	NA	91140900	91139002	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_91139000_91140900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087750	chr4	-	237	1	ISM	ENSMUSG00000028577.14	ENSMUST00000129748.2	3886	4	6985	1653	6985	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGAGGTTTTCCTGTG	NA	False	NA	-12	True	AATAAA	-15	NA	94457640	94457403	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_94457400_94457600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087764	chr4	-	1286	3	FSM	ENSMUSG00000062627.10	ENSMUST00000136130.2	704	3	-3	-579	0	579	multi-exon	FALSE	canonical	3	64	junction_1	6	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCTTTTATAGTATATCT	NA	False	NA	NA	False	NA	NA	NA	94867315	94860090	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_94861226_94863453_94863530_94867240
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087818	chr4	+	188	1	Intergenic	novelGene_292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTAAGGGTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	99537445	99537633	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_99537400_99537600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087825	chr4	+	334	1	FSM	ENSMUSG00000067261.5	ENSMUST00000087285.5	2324	1	2041	-51	2041	51	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTGTTTTAATTAGGT	NA	False	NA	6	True	AATAAA	-16	NA	99546576	99546910	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_99546600_99546900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087828	chr4	+	700	5	ISM	ENSMUSG00000073792.12	ENSMUST00000144805.8	3947	14	4	22814	4	24	5prime_fragment	FALSE	canonical	3	166	junction_1	24.1557446583623	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTACTCTTGTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	99603905	99627734	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087850	chr4	-	752	9	NNC	ENSMUSG00000028549.18	novel	2806	9	NA	NA	2	-75	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	77.741157053391	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGCCTTTGTGTGCAAAA	NA	False	NA	-17	True	AATAAA	-14	NA	99717369	99655642	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99686932_99687000_99690333_99690470_99702294_99702338_99717315
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087872	chr4	+	824	3	NNC	ENSMUSG00000028527.19	novel	4360	6	NA	NA	20	-38028	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	4.5	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAAATGTTTCTATTCTT	NA	False	NA	NA	False	NA	NA	NA	101276535	101279750	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_101276754_101276925_101277163_101279381
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087901	chr4	+	1528	1	NIC	ENSMUSG00000035212.15	novel	1898	4	NA	NA	10044	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGTTGCATTTCATAAA	6919	False	NA	8	True	AATAAA	-20	NA	101515033	101516561	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_101515000_101516600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087917	chr4	-	1013	4	NNC	ENSMUSG00000046133.4	novel	913	3	NA	NA	-9901	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	190.51217517232	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTTCTTCTTGATGT	NA	False	NA	-2	True	ATTAAA	-26	NA	101760887	101747216	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_101747741_101747885_101748198_101760342_101760431_101760798
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087966	chr4	+	2947	1	ISM	ENSMUSG00000028522.17	ENSMUST00000106858.8	4830	15	48411	2	4220	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTGTGGTGTCTAGTT	NA	False	NA	15	True	ATTAAA	-16	NA	103020002	103022949	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_103020000_103022900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087974	chr4	+	1935	1	FSM	ENSMUSG00000059195.11	ENSMUST00000121430.2	1128	1	-78	-729	-78	729	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTTCAAGAGATATGAATA	NA	False	NA	NA	False	NA	NA	NA	103420520	103422455	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_103420500_103422500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000087999	chr4	+	893	1	ISM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	74521	4	74521	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGCACTGGTGCCTGAG	NA	False	NA	9	True	AATAAA	-19	NA	105089064	105089957	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_105089100_105090000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088000	chr4	+	405	2	Intergenic	novelGene_293	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTTTGTCTGGGGTGCA	NA	False	NA	NA	False	AATACA	-17	NA	105100463	105102960	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_105100572_105102663
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088010	chr4	+	115	1	Intergenic	novelGene_294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGGGCCCAAGAGAAGAG	NA	False	NA	NA	False	AATAAA	-22	NA	106146107	106146222	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_106146100_106146200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088014	chr4	+	331	1	ISM	ENSMUSG00000034926.4	ENSMUST00000047973.4	4028	9	27745	0	27745	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTGTCATTTATTCAG	NA	False	NA	18	True	AATAAA	-18	NA	106445979	106446310	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_106446000_106446300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088021	chr4	+	2217	2	FSM	ENSMUSG00000043572.8	ENSMUST00000106782.2	502	2	28	-1743	-1	0	multi-exon	FALSE	canonical	3	39	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGTGTGTGTGTGTG	NA	False	NA	5	True	AATAAA	-20	NA	106508293	106512479	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_106508346_106510314
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088085	chr4	-	965	6	NIC	ENSMUSG00000028617.11	novel	1755	8	NA	NA	-3853	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_5	81.3324043662795	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCTTTTGAATTGCAGA	NA	False	NA	-5	True	AATAAA	-20	NA	107104577	107090710	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_107091182_107092996_107093082_107096274_107096389_107096908_107096998_107098098_107098218_107104490
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088089	chr4	-	479	1	NIC	ENSMUSG00000028617.11	novel	1755	8	NA	NA	1988	0	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCTTTTGAATTGCAGA	NA	False	NA	-5	True	AATAAA	-20	NA	107091189	107090710	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_107090700_107091200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088118	chr4	+	649	6	NNC	ENSMUSG00000063172.14	novel	608	6	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	158.709798059225	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCATTTTTTTTATATAAA	NA	False	NA	9	True	ATTAAA	-20	NA	107111088	107137136	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_107111193_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135165_107136921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088132	chr4	+	1406	11	NNC	ENSMUSG00000057375.14	novel	1321	10	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	152.184887554579	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCCTTCAGCTCTT	NA	False	NA	29	True	AGTAAA	-19	NA	107171573	107217020	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107197523_107197622_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088133	chr4	+	1323	10	NNC	ENSMUSG00000057375.14	novel	1321	10	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	124.377660651484	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCCTTCAGCTCTT	NA	False	NA	29	True	AGTAAA	-19	NA	107171573	107217020	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201891_107202205_107202389_107207610_107207736_107216803
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088134	chr4	+	1327	10	NNC	ENSMUSG00000057375.14	novel	1321	10	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_9	123.24050560681	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCCTTCAGCTCTT	NA	False	NA	29	True	AGTAAA	-19	NA	107171573	107217020	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207755_107216803
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088193	chr4	+	778	8	NIC	ENSMUSG00000028608.16	novel	2997	8	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	253.100609180118	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTGAAGGTGGTCT	NA	False	NA	14	True	AATAAA	-19	NA	107747079	107754315	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_107747211_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088229	chr4	+	1280	10	NNC	ENSMUSG00000028601.19	novel	1307	10	NA	NA	-5	0	intron_retention	TRUE	canonical	3	26	junction_4	242.073909742	33	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGCTGGAATTGTTGG	NA	False	NA	24	True	AATAAA	-17	NA	108022657	108036505	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_108022859_108026911_108026980_108027057_108027146_108029285_108029373_108030079_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088250	chr4	-	1151	3	ISM	ENSMUSG00000034636.10	ENSMUST00000043616.7	8691	14	6	36064	6	-24322	5prime_fragment	FALSE	canonical	3	118	junction_2	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCAGGTTTTTTTTTCC	NA	False	NA	NA	False	ATTAAA	-18	NA	108158287	108122984	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_108123770_108129414_108129581_108158087
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088297	chr4	-	1310	9	NNC	ENSMUSG00000063800.6	novel	1516	10	NA	NA	202	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	182.781973947105	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTTTTTGTTTCTTC	NA	False	NA	-7	True	ATTAAA	-21	NA	108436331	108422065	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_108422465_108424101_108424151_108424619_108424718_108425532_108425668_108427352_108427464_108430002_108430089_108432565_108432688_108434125_108434286_108436181
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088335	chr4	-	987	7	NNC	ENSMUSG00000028568.17	novel	624	7	NA	NA	-22	274	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	515.895149769365	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTTTTTTTTCCTAAC	NA	False	NA	NA	False	AATAAA	-17	NA	108690783	108673640	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108688902_108688926_108690704
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088381	chr4	-	2803	23	NNC	ENSMUSG00000028559.18	novel	2903	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	118.53859607879	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTTCATTGTTTT	NA	False	NA	-1	True	CATAAA	-25	NA	109059431	108918846	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923057_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088385	chr4	-	483	4	ISM	ENSMUSG00000028559.18	ENSMUST00000162787.9	2408	23	38	71519	0	179	5prime_fragment	FALSE	canonical	3	84	junction_1	9.41629792788369	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCTATTTTCTATAG	NA	False	NA	NA	False	AATAAA	-15	NA	109059431	108990794	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_108991018_109013851_109013931_109029470_109029522_109059301
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088388	chr4	+	1742	9	NNC	ENSMUSG00000028558.15	novel	1606	8	NA	NA	-16148	2	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	5.12195031213697	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTTTTCTTTTGTTT	NA	False	NA	NA	False	TATAAA	-19	NA	109075533	109111544	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_109075716_109092970_109093073_109095974_109096179_109099353_109099449_109101248_109101459_109101885_109102000_109103344_109103489_109108523_109108617_109110946
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088413	chr4	+	1090	4	Intergenic	novelGene_296	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	3.2659863237109	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGCATGTGTCCTTATT	NA	False	NA	NA	False	NA	NA	NA	109862637	109866110	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_109862813_109863820_109863952_109864517_109864840_109865648
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088414	chr4	+	1271	3	Intergenic	novelGene_297	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	21.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTCTTGTGTTACATT	NA	False	NA	NA	False	NA	NA	NA	109862637	109879550	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_109862813_109864517_109864840_109878776
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088415	chr4	+	950	3	Intergenic	novelGene_295	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	21.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGGAGCATGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	109862637	109866106	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_109862813_109864517_109864840_109865653
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088430	chr4	+	439	1	Intergenic	novelGene_298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGGAGCATGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	109865667	109866106	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_109865700_109866100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088438	chr4	+	180	1	NIC	ENSMUSG00000028545.14	novel	1826	6	NA	NA	26429	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTTGCATTTTTTTTGT	NA	False	NA	8	True	AATAAA	-20	NA	111316944	111317124	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_111316900_111317100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088445	chr4	-	1848	6	FSM	ENSMUSG00000028719.9	ENSMUST00000030491.9	3170	6	49	1273	-43	-1273	multi-exon	FALSE	canonical	3	519	junction_1	39.0302446828098	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTCTTTTTTCTTTTTT	NA	False	NA	24	True	AATAAA	-43	NA	114844389	114817805	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_114818953_114820261_114820359_114820552_114820630_114822079_114822233_114826414_114826562_114844162
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088447	chr4	-	460	1	ISM	ENSMUSG00000028719.9	ENSMUST00000030491.9	3170	6	26144	1302	25975	-1302	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATTTTCTTTCTTTAAAA	NA	False	NA	-5	True	AATAAA	-14	NA	114818294	114817834	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_114817800_114818300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088452	chr4	+	955	1	Genic_Genomic	ENSMUSG00000028718.17	novel	NA	NA	NA	NA	26065	7	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTCTCTTCACTGAAT	NA	False	NA	NA	False	ATTAAA	-24	NA	114899445	114900400	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_+_114899400_114900400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088461	chr4	-	638	2	Antisense	novelGene_ENSMUSG00000028710.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTGTCATAACTATAAAT	NA	False	NA	NA	False	NA	NA	NA	115684394	115658315	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr4_-_115658823_115684263
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088491	chr4	-	609	4	FSM	ENSMUSG00000063882.13	ENSMUST00000134760.2	579	4	-29	-1	-4	1	multi-exon	FALSE	canonical	3	10	junction_2	488.184618993903	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTCCTTCCTTTGCCA	7665	False	NA	-6	True	AATAAA	-18	NA	115932260	115924160	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_115924370_115927059_115927222_115927864_115927955_115932112
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088496	chr4	-	209	1	Genic_Genomic	ENSMUSG00000063882.13	novel	NA	NA	NA	NA	2906	1	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTCCTTCCTTTGCCA	NA	False	NA	-6	True	AATAAA	-18	NA	115924369	115924160	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_115924200_115924400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088515	chr4	-	514	4	NNC	ENSMUSG00000063882.13	novel	547	4	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	492.893723050134	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTCCTTCCTTTGCC	7686	False	NA	-7	True	AATAAA	-17	NA	115932239	115924161	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_115924370_115927059_115927222_115927933_115927951_115932112
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088528	chr4	-	396	3	NNC	ENSMUSG00000063882.13	novel	579	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	536	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTTGTCCTTCCTTTGC	7694	False	NA	-8	True	AATAAA	-16	NA	115932231	115924162	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_115924370_115927059_115927117_115932099
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088539	chr4	+	510	1	FSM	ENSMUSG00000078238.5	ENSMUST00000128518.2	297	1	-66	-147	-66	147	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAAAATAATGTCAT	NA	False	NA	NA	False	AATAAA	-32	NA	115924398	115924908	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_115924400_115924900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088548	chr4	-	168	1	ISM	ENSMUSG00000028702.16	ENSMUST00000139147.2	4571	4	2936	2691	2936	20	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGCCTGGGAACACATT	9902	False	NA	-35	True	NA	NA	NA	115954319	115954151	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_115954200_115954300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088561	chr4	+	612	3	NNC	ENSMUSG00000028700.15	novel	557	3	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTTCATGCATATAACT	NA	False	NA	NA	False	AATGAA	-36	NA	115981029	115996047	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_115981314_115994842_115995026_115995902
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088603	chr4	-	748	1	Genic_Genomic	ENSMUSG00000028693.16	novel	NA	NA	NA	NA	3130	4	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTTCTGGAATTATAT	5220	False	NA	NA	False	AATAAA	-20	NA	116458992	116458244	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_116458200_116459000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088631	chr4	-	1249	8	NIC	ENSMUSG00000028692.15	novel	1420	9	NA	NA	51	0	combination_of_known_splicesites	FALSE	canonical	3	54	junction_6	574.994374417911	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGTGTGCCTGACTTA	NA	False	NA	-1	True	AATAAA	-15	NA	116508826	116493706	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_116493867_116494958_116495046_116495172_116495246_116496157_116496358_116497006_116497203_116498187_116498340_116502700_116502791_116508535
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088650	chr4	+	924	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	-1	243	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_5	9225.20289207777	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	31	True	ATTAAA	-16	NA	116542794	116556712	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556376
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088652	chr4	+	926	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	-1	243	at_least_one_novel_splicesite	FALSE	canonical	3	88	junction_1	9231.04725153111	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	31	True	ATTAAA	-16	NA	116542794	116556712	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_116542858_116544610_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088653	chr4	+	937	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	-1	243	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9399.24659533944	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	31	True	ATTAAA	-16	NA	116542794	116556712	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550207_116550913_116551045_116556367
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088654	chr4	+	927	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	-1	243	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9229.99602600131	126	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	31	True	ATTAAA	-16	NA	116542794	116556712	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550203_116550913_116551039_116556367
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088664	chr4	+	930	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	-1	243	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	9264.57490875863	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	31	True	ATTAAA	-16	NA	116542794	116556712	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_116542862_116544610_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088670	chr4	+	961	6	NIC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	0	243	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	9256.99122609501	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	31	True	ATTAAA	-16	NA	116542795	116556712	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_116542858_116544574_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088678	chr4	+	919	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	0	243	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9399.24659533944	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	31	True	ATTAAA	-16	NA	116542795	116556712	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550190_116550913_116551045_116556367
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088688	chr4	+	936	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	0	243	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9265.77233478138	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	31	True	ATTAAA	-16	NA	116542795	116556712	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_116542862_116544603_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088690	chr4	+	931	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	0	243	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9266.17147693696	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	31	True	ATTAAA	-16	NA	116542795	116556712	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_116542864_116544610_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088704	chr4	+	831	1	NIC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	11857	727	mono-exon	FALSE	NA	NA	NA	NA	NA	1845	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTCATGCCTAGCT	NA	False	NA	8	True	NA	NA	NA	116556365	116557196	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_116556400_116557200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088718	chr4	+	909	6	NIC	ENSMUSG00000028689.15	novel	1159	11	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	33.0187825335823	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCTCTGTAAATCTTG	5642	False	NA	16	True	AATAAA	-20	NA	116565791	116572301	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_116565854_116566634_116566817_116566920_116567003_116567297_116567482_116571212_116571347_116572036
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088729	chr4	+	492	2	ISM	ENSMUSG00000028689.15	ENSMUST00000156206.2	431	3	1133	-5	1133	0	3prime_fragment	FALSE	canonical	3	73	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCTCTGTAAATCTTG	NA	False	NA	16	True	AATAAA	-20	NA	116571119	116572301	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_116571347_116572036
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088783	chr4	-	1181	10	NNC	ENSMUSG00000028684.15	novel	1489	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	113.286264735747	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAGCATGTTCTTTTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	116851561	116847413	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850444_116850508_116850584_116850665_116850781_116850888_116851527
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088801	chr4	+	1522	12	NNC	ENSMUSG00000028683.15	novel	1555	12	NA	NA	24	0	at_least_one_novel_splicesite	TRUE	canonical	1	8	junction_2	188.500213735986	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCAGTGGTAGAG	NA	False	NA	20	True	AATAAA	-20	NA	116876628	116944049	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_116876674_116879351_116879510_116885610_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116938754_116938859_116943885
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088850	chr4	-	1157	5	NIC	ENSMUSG00000047675.16	novel	860	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	8358	junction_4	2114.54475005851	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTAGGTGTTTGGAG	NA	False	NA	-20	True	AATAAA	-23	NA	117013281	117011030	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_117011185_117011495_117011626_117011834_117012011_117012204_117012875_117013254
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088879	chr4	-	1736	10	NNC	ENSMUSG00000028677.20	novel	1842	10	NA	NA	-52	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	365.792425790136	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	9851	False	NA	NA	False	ATTAAA	-14	NA	117146362	117128660	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134935_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088893	chr4	+	1300	8	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-45	2	at_least_one_novel_splicesite	TRUE	canonical	3	22	junction_1	247.509142276006	45	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGTCTGGAGCCACC	NA	False	NA	11	True	AATAAA	-18	NA	117407516	117531480	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_117407560_117421823_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088940	chr4	+	896	1	ISM	ENSMUSG00000028542.18	ENSMUST00000030269.14	3479	14	33359	0	-5672	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGATGTGCTTTGTCT	NA	False	NA	27	True	AATGAA	-21	NA	117725606	117726502	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_117725600_117726500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088942	chr4	-	1009	3	ISM	ENSMUSG00000028541.15	ENSMUST00000106421.9	1801	8	5985	-171	5164	0	3prime_fragment	FALSE	canonical	3	58	junction_2	4.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTTGTCTGTCTGTGA	NA	False	NA	-9	True	AGTAAA	-17	NA	117734324	117730327	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_117731201_117734076_117734182_117734293
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000088960	chr4	-	1013	8	NNC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_7	893.324289222165	79	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	-1	True	AATAAA	-21	NA	117744543	117741522	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743836_117744370
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089006	chr4	-	249	1	Genic_Genomic	ENSMUSG00000033326.16	novel	NA	NA	NA	NA	9556	2	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTGTGGTCTGCCCCAT	NA	False	NA	1	True	AATAAA	-18	NA	117994400	117994151	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_117994200_117994400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089034	chr4	+	1285	7	NIC	ENSMUSG00000006392.17	novel	635	5	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	242.454577647489	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCATTCCTTGTCCTA	NA	False	NA	32	True	NA	NA	NA	118266585	118272308	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_118266747_118268081_118268201_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089082	chr4	+	1163	9	NNC	ENSMUSG00000028729.16	novel	2960	9	NA	NA	10	367	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	793.893845233731	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTGGGTTAAAACCAGAT	NA	False	NA	23	True	AATAAA	-23	NA	118478005	118483182	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480888_118481331_118481426_118482719_118482883_118483016
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089084	chr4	+	1148	9	NNC	ENSMUSG00000028729.16	novel	2960	9	NA	NA	19	368	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	796.449582522334	196	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGGGTTAAAACCAGATA	NA	False	NA	24	True	AATAAA	-24	NA	118478014	118483183	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_118478195_118478278_118478360_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089110	chr4	+	1120	9	NNC	ENSMUSG00000028729.16	novel	2960	9	NA	NA	-6	367	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	792.354156532923	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTGGGTTAAAACCAGAT	NA	False	NA	23	True	AATAAA	-23	NA	118478038	118483182	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_118478195_118478284_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089116	chr4	+	1129	9	NNC	ENSMUSG00000028729.16	novel	2960	9	NA	NA	-3	367	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	793.893845233731	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTGGGTTAAAACCAGAT	NA	False	NA	23	True	AATAAA	-23	NA	118478041	118483182	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480890_118481331_118481426_118482719_118482883_118483016
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089128	chr4	+	1026	7	ISM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	422	1791	-5	367	3prime_fragment	FALSE	canonical	3	2261	junction_3	107.131798371082	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTGGGTTAAAACCAGAT	NA	False	NA	23	True	AATAAA	-23	NA	118478417	118483182	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089132	chr4	+	173	1	NIC	ENSMUSG00000028729.16	novel	2960	9	NA	NA	4587	367	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTGGGTTAAAACCAGAT	NA	False	NA	23	True	AATAAA	-23	NA	118483009	118483182	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_118483000_118483200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089136	chr4	-	315	3	Antisense	novelGene_ENSMUSG00000083336.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2.5	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTGGCTACATTCTTT	NA	False	NA	NA	False	NA	NA	NA	118770991	118602444	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr4_-_118602635_118767756_118767840_118770949
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089141	chr4	-	304	3	Antisense	novelGene_ENSMUSG00000083336.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2.5	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	118770991	118602448	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr4_-_118602635_118767756_118767833_118770949
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089195	chr4	-	846	4	NIC	ENSMUSG00000078584.10	novel	7151	5	NA	NA	-2	376	combination_of_known_splicesites	FALSE	canonical	3	29	junction_3	165.023903992388	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTTTCTTTGTGTCTT	NA	False	NA	-2	True	NA	NA	NA	119089884	119083202	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_119083725_119083997_119084130_119085223_119085311_119089779
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089228	chr4	+	1091	1	Genic_Genomic	ENSMUSG00000028641.17	novel	NA	NA	NA	NA	1025	2	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGTTTGTGTATCT	NA	False	NA	6	True	NA	NA	NA	119105083	119106174	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_+_119105100_119106200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089234	chr4	-	1954	8	FSM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	327	-653	203	653	multi-exon	FALSE	canonical	3	9851	junction_2	327.608589257214	8022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTTGATTGTGTTTAAT	NA	False	NA	NA	False	NA	NA	NA	119151474	119134524	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089241	chr4	-	392	1	Genic_Genomic	ENSMUSG00000028639.15	novel	NA	NA	NA	NA	1080	2	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTTTTGTCATAATTGA	NA	False	NA	NA	False	AATAAA	-18	NA	119135567	119135175	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_119135200_119135600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089245	chr4	-	732	3	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	542	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4925.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	False	NA	NA	False	AATAAA	-16	NA	119138841	119135177	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_119135565_119136126_119136397_119138766
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089247	chr4	-	890	5	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4529.00703107204	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	False	NA	NA	False	AATAAA	-16	NA	119151697	119135177	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139425_119151625
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089266	chr4	-	970	10	NNC	ENSMUSG00000060288.14	novel	800	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	168.863521486699	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTGTAGTTACTATT	9628	False	NA	-3	True	AATAAA	-19	NA	119177697	119157206	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_119157381_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177267_119177365_119177431_119177605
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089271	chr4	-	765	9	NNC	ENSMUSG00000060288.14	novel	757	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	173.04402438397	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTGTAGTTACTATT	9629	False	NA	-3	True	AATAAA	-19	NA	119177696	119157206	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_119157400_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177348_119177431_119177605
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089277	chr4	-	1307	10	FSM	ENSMUSG00000060288.14	ENSMUST00000106321.9	1288	10	-16	-3	-1	3	multi-exon	TRUE	canonical	2	32	junction_8	172.260640876149	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCTTGTCTAGCCTGTCT	9628	False	NA	1	True	NA	NA	NA	119177697	119164353	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_119165081_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089299	chr4	-	771	1	Genic_Genomic	ENSMUSG00000028636.15	novel	NA	NA	NA	NA	3061	3	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGTTTCTGGTTTTTTGTT	8628	False	NA	-1	True	AATAAA	-33	NA	119276494	119275723	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_119275700_119276500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089307	chr4	+	186	1	ISM	ENSMUSG00000070806.6	ENSMUST00000094819.5	1464	8	30900	89	8994	-89	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCCCTTGGCTTTCCAA	NA	False	NA	NA	False	AATAAA	-18	NA	119310910	119311096	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_119310900_119311100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089315	chr4	+	197	1	Intergenic	novelGene_299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCGCTATCGCCCGTAGA	NA	False	NA	NA	False	NA	NA	NA	119390222	119390419	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_119390200_119390400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089316	chr4	+	1158	1	ISM	ENSMUSG00000032998.17	ENSMUST00000044564.15	4789	13	88301	0	6620	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCAGCCTGATGGTCTGT	NA	False	NA	23	True	AATAAA	-19	NA	119485158	119486316	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_119485200_119486300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089352	chr4	-	1276	1	ISM	ENSMUSG00000032870.9	ENSMUST00000043200.8	2905	10	47651	4	6112	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTGCTCGGCTGTCAC	NA	False	NA	-6	True	AATAAA	-17	NA	120826793	120825517	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_120825500_120826800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089354	chr4	+	1069	5	FSM	ENSMUSG00000028626.6	ENSMUST00000140119.2	752	5	190	-507	190	4	multi-exon	FALSE	canonical	3	62	junction_1	4.82182538049648	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGTGGATGAGGATGG	NA	False	NA	25	True	AATAAA	-26	NA	120910385	120912523	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_120910402_120910635_120910691_120910966_120911156_120911449_120911528_120911792
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089361	chr4	-	415	1	ISM	ENSMUSG00000043207.11	ENSMUST00000058754.9	3429	10	38590	0	18087	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCTGGTGTTGGGTTTGA	8143	False	NA	-1	True	ATTAAA	-20	NA	120916848	120916433	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_120916400_120916800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089372	chr4	+	2309	9	FSM	ENSMUSG00000028657.15	ENSMUST00000030412.11	2381	9	-13	85	-13	-85	multi-exon	FALSE	canonical	3	268	junction_2	20.6579282601136	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTATCATTTTCAGTAT	NA	False	NA	18	True	AATAAA	-16	NA	122730021	122752786	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_122730173_122737787_122737898_122738210_122738339_122739763_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122749598_122749671_122751302
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089377	chr4	+	1230	10	NNC	ENSMUSG00000028657.15	novel	2573	10	NA	NA	0	-87	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	96.4254973708193	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTATCATTTTCAGT	NA	False	NA	16	True	AATAAA	-14	NA	122730038	122752784	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_122730173_122737787_122737898_122738210_122738339_122739763_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122749598_122749671_122751302_122751478_122752537
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089382	chr4	-	922	1	ISM	ENSMUSG00000028656.15	ENSMUST00000069533.12	2620	13	25935	8	4656	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTATTCACCTGATGT	NA	False	NA	-15	True	AATAAA	-17	NA	122753769	122752847	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_122752800_122753800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089421	chr4	-	1166	9	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	354.711832865779	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGCCTCCTGCAAGTT	NA	False	NA	-15	True	AATAAA	-24	NA	123033739	123020908	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123031307_123031363_123032658_123032758_123033694
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089455	chr4	+	388	3	NNC	ENSMUSG00000087307.2	novel	678	3	NA	NA	-2647	3	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	3	34	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCGCCTTTTATTGTG	NA	False	NA	NA	False	NA	NA	NA	123557026	123562523	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_123557174_123561406_123561541_123562416
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089465	chr4	-	582	3	FSM	ENSMUSG00000028648.14	ENSMUST00000030401.14	525	3	-19	-38	-19	38	multi-exon	FALSE	canonical	3	1318	junction_2	395	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTCCTAGTTGCCTCTC	1813	False	NA	13	True	NA	NA	NA	123612014	123606464	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_123606720_123609656_123609875_123611905
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089468	chr4	-	615	3	FSM	ENSMUSG00000028648.14	ENSMUST00000106206.8	599	3	8	-24	3	24	multi-exon	FALSE	canonical	3	65	junction_2	1021.5	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGTGGTGAAAGGTTGT	1856	False	NA	-1	True	AATAAA	-41	NA	123611971	123606478	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_123606720_123609656_123609875_123611815
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089485	chr4	-	839	1	ISM	ENSMUSG00000023075.10	ENSMUST00000102636.4	3052	5	14156	792	7318	-792	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGATGCTGTGATGAT	NA	False	NA	-6	True	AATAAA	-27	NA	123629982	123629143	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_123629100_123630000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089518	chr4	-	1621	8	FSM	ENSMUSG00000028907.8	ENSMUST00000030738.8	1603	8	-14	-4	-14	4	multi-exon	FALSE	canonical	3	1259	junction_4	134.593264834372	3830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	AGTAAA	-2	NA	124587407	124571948	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_124572780_124573494_124573606_124575985_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089528	chr4	-	905	8	NNC	ENSMUSG00000028907.8	novel	1603	8	NA	NA	17	-12	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	515.414317192826	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTGGTCTTCCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	124587376	124572601	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_124572780_124573494_124573606_124575985_124576085_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089567	chr4	+	724	1	NIC	ENSMUSG00000028890.14	novel	7554	12	NA	NA	1980	3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATTCATGTTTATACTG	223	False	NA	7	True	AATAAA	-18	NA	124698450	124699174	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_124698400_124699200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089589	chr4	+	309	1	Genic_Genomic	ENSMUSG00000028889.18	novel	NA	NA	NA	NA	3052	13	mono-exon	FALSE	NA	NA	NA	NA	NA	454	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTCTTTTGAGTTATT	5802	False	NA	56	True	ATTAAA	-31	NA	124748739	124749048	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_+_124748700_124749000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089706	chr4	+	755	2	NNC	ENSMUSG00000050188.9	novel	943	2	NA	NA	59	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTCTGTGCCTGATGCCC	NA	False	NA	28	True	CATAAA	-19	NA	125990511	125992375	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_125990603_125991711
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089714	chr4	+	757	1	NIC	ENSMUSG00000050188.9	novel	943	2	NA	NA	1168	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGTGCCTGATGCCCTG	NA	False	NA	30	True	CATAAA	-21	NA	125991620	125992377	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_125991600_125992400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089735	chr4	-	428	3	ISM	ENSMUSG00000073758.11	ENSMUST00000152402.8	2071	12	11410	-6	11410	0	3prime_fragment	FALSE	canonical	2	5	junction_2	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCAGTCTGGTCCTTGTGG	NA	False	NA	0	True	AGTAAA	-21	NA	126044984	126044394	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_126044590_126044669_126044728_126044809
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089742	chr4	-	1541	1	Genic_Genomic	ENSMUSG00000043962.17	novel	NA	NA	NA	NA	1858	4	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTGTTGCTTGTGTG	NA	False	NA	1	True	AATAAA	-32	NA	126059411	126057870	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_126057900_126059400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089753	chr4	-	519	1	ISM	ENSMUSG00000028849.18	ENSMUST00000125981.8	2363	12	7426	0	863	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126126478	126125959	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_126126000_126126500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089796	chr4	-	1474	2	Genic_Genomic	ENSMUSG00000081319.2	novel	301	1	NA	NA	-81369	106	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATCAATCAATCAAACCC	NA	False	NA	NA	False	AATAAA	-33	NA	126559971	126478195	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_126478688_126558989
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089801	chr4	-	1474	2	Genic_Genomic	ENSMUSG00000081319.2	novel	301	1	NA	NA	-81369	106	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATCAATCAATCAAACCC	NA	False	NA	NA	False	AATAAA	-33	NA	126559971	126478195	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_126478714_126559015
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089810	chr4	-	1435	2	Genic_Genomic	ENSMUSG00000081319.2	novel	301	1	NA	NA	-81369	41	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGCAGTTGTTCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	126559971	126478260	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_126478714_126558989
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089819	chr4	+	731	5	NIC	ENSMUSG00000028837.9	novel	859	6	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	136	junction_1	1450.30695026949	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGGGTTTGGCCTTA	5385	False	NA	19	True	AATAAA	-21	NA	126571427	126603507	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_126571639_126580821_126580893_126599850_126600014_126601346_126601397_126603271
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089823	chr4	+	841	6	NNC	ENSMUSG00000028837.9	novel	859	6	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1426.83467858053	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGGGTTTGGCCTTA	5392	False	NA	19	True	AATAAA	-21	NA	126571434	126603507	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_126571639_126577914_126578038_126580821_126580893_126599850_126600014_126601346_126601397_126603277
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089844	chr4	+	826	6	NNC	ENSMUSG00000028837.9	novel	859	6	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1426.83467858053	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGGGTTTGGCCTTA	5417	False	NA	19	True	AATAAA	-21	NA	126571459	126603507	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_126571639_126577914_126578038_126580821_126580893_126599850_126600014_126601346_126601401_126603271
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089853	chr4	+	238	1	NIC	ENSMUSG00000028837.9	novel	859	6	NA	NA	31773	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGGGTTTGGCCTTA	NA	False	NA	19	True	AATAAA	-21	NA	126603269	126603507	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_126603300_126603500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089867	chr4	+	1981	6	ISM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	4531	0	-69	0	3prime_fragment	FALSE	canonical	3	823	junction_1	95.3603691268024	2725	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTTCTTCCCAGTGT	NA	False	NA	26	True	AATAAA	-22	NA	126919647	126925029	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089871	chr4	+	742	2	ISM	ENSMUSG00000028820.14	ENSMUST00000125453.2	644	3	827	-544	827	78	3prime_fragment	FALSE	canonical	3	1050	junction_1	0	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTGATGTTTCTACTTT	NA	False	NA	NA	False	AAAAAG	-2	NA	126921064	126921886	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_126921110_126921189
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089931	chr4	-	1041	3	NNC	ENSMUSG00000042367.13	novel	1623	2	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	470	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGTTCTTCCCTCCATTC	NA	False	NA	-5	True	AATAAA	-17	NA	127222929	127219027	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_127219156_127219712_127220565_127222868
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089944	chr4	-	1601	2	NNC	ENSMUSG00000042367.13	novel	1623	2	NA	NA	83	0	at_least_one_novel_splicesite	FALSE	canonical	2	56	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGTTCTTCCCTCCATTC	NA	False	NA	-5	True	AATAAA	-17	NA	127222871	127219027	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_127220565_127222807
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089969	chr4	+	557	4	Antisense	novelGene_ENSMUSG00000042367.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_3	35.3679076125361	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTAGTGTTTTTATTTTG	9238	False	NA	12	True	AATATA	-24	NA	127223999	127237055	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr4_+_127224096_127225680_127225785_127226134_127226258_127236821
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000089971	chr4	+	449	4	Antisense	novelGene_ENSMUSG00000042367.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_3	31.7104959840674	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGCGTGTGTTTGTGTGT	9242	False	NA	NA	False	AATAAA	-21	NA	127224003	127232837	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr4_+_127224096_127225680_127225785_127226134_127226258_127232707
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090010	chr4	-	208	1	ISM	ENSMUSG00000061894.16	ENSMUST00000084276.12	3962	4	6216	0	6216	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTATTTCTTTCTGT	NA	False	NA	2	True	NA	NA	NA	128477539	128477331	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_128477300_128477500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090016	chr4	+	1811	7	FSM	ENSMUSG00000028792.15	ENSMUST00000102604.11	1781	7	-23	-7	-23	7	multi-exon	FALSE	canonical	3	1917	junction_3	122.234746833023	2356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGTTTTTTGAGGAAT	2846	False	NA	36	True	AATAAA	-26	NA	128886993	128905329	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090039	chr4	+	346	1	ISM	ENSMUSG00000028792.15	ENSMUST00000030583.13	986	6	14832	0	14703	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGCACTCATCTATGT	NA	False	NA	22	True	ATTAAA	-26	NA	128901848	128902194	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_128901800_128902200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090060	chr4	-	508	1	Genic_Genomic	ENSMUSG00000040928.16	novel	NA	NA	NA	NA	29799	3	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTACTGTGGCCGTCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	129042302	129041794	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_129041800_129042300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090087	chr4	-	260	1	ISM	ENSMUSG00000050390.13	ENSMUST00000106051.8	5049	7	8074	0	7643	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGCTGTTTTCCA	8449	False	NA	0	True	ATTAAA	-28	NA	129113630	129113370	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_129113400_129113600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090100	chr4	-	1269	8	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	-60	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	365.178904994608	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGTGGGTTTTATTTAG	2553	False	NA	-21	True	AATAAA	-22	NA	129229102	129203301	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_129203670_129215709_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090210	chr4	-	2052	14	FSM	ENSMUSG00000028800.16	ENSMUST00000102597.5	2038	14	-11	-3	-11	3	multi-exon	FALSE	canonical	3	1463	junction_10	202.513203601978	918	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTGGTTTAAGTTCTT	8797	False	NA	-2	True	AATAAA	-25	NA	129436517	129409893	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090234	chr4	-	1143	11	FSM	ENSMUSG00000028798.17	ENSMUST00000102593.11	1123	11	-19	-1	-19	1	multi-exon	FALSE	canonical	3	822	junction_10	179.667915889287	3463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGCAGCCTGTCTGTT	6358	False	NA	1	True	AATAAA	-33	NA	129494460	129485751	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490666_129490733_129492747_129492836_129494201_129494295_129494386
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090245	chr4	-	1152	10	ISM	ENSMUSG00000028798.17	ENSMUST00000102593.11	1123	11	49	14	0	-14	intron_retention	FALSE	canonical	3	1341	junction_3	45.5241083871441	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTTGTCAGGCATTTTG	6426	False	NA	-14	True	AATAAA	-18	NA	129494392	129485766	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490666_129490733_129492747_129492836_129494201
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090248	chr4	-	1079	11	NNC	ENSMUSG00000028798.17	novel	1123	11	NA	NA	-11	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	440.33647361989	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTTGTCAGGCATTTTG	6398	False	NA	-14	True	AATAAA	-18	NA	129494420	129485766	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490675_129490733_129492747_129492836_129494201_129494295_129494386
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090249	chr4	-	994	11	NNC	ENSMUSG00000028798.17	novel	1123	11	NA	NA	-4	-14	at_least_one_novel_splicesite	FALSE	canonical	2	43	junction_7	428.58488074126	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTTGTCAGGCATTTTG	6405	False	NA	-14	True	AATAAA	-18	NA	129494413	129485766	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489120_129490666_129490733_129492747_129492836_129494201_129494295_129494386
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090254	chr4	-	1105	11	NNC	ENSMUSG00000028798.17	novel	1123	11	NA	NA	0	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	438.513181101777	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTTGTCAGGCATTTTG	6377	False	NA	-14	True	AATAAA	-18	NA	129494441	129485766	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488976_129489056_129489207_129490666_129490733_129492747_129492836_129494201_129494295_129494386
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090267	chr4	-	163	1	NIC	ENSMUSG00000028798.17	novel	1123	11	NA	NA	3632	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTTGTCAGGCATTTTG	5201	False	NA	-14	True	AATAAA	-18	NA	129485929	129485766	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_129485800_129485900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090319	chr4	-	795	6	FSM	ENSMUSG00000028795.16	ENSMUST00000151838.8	744	6	-49	-2	0	0	multi-exon	FALSE	canonical	1	5	junction_3	33.5535393066067	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTCGGTGCTCTCCTTGT	NA	False	NA	-2	True	ATTAAA	-16	NA	129517679	129513066	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_129513240_129514249_129514273_129514475_129514647_129514776_129514944_129516392_129516581_129517606
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090324	chr4	-	838	6	NNC	ENSMUSG00000028795.16	novel	879	6	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	35.3530762452152	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTCGGTGCTCTCCTTGT	NA	False	NA	-2	True	ATTAAA	-16	NA	129517695	129513066	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_129513240_129514249_129514273_129514475_129514670_129514776_129514944_129516392_129516581_129517602
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090359	chr4	+	197	1	ISM	ENSMUSG00000028788.15	ENSMUST00000030578.14	3646	6	28016	1545	9086	-1545	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGTGGCGCATATATTCT	NA	False	NA	5	True	NA	NA	NA	129742029	129742226	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_129742000_129742200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090368	chr4	+	197	1	Intergenic	novelGene_300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	6448	False	NA	NA	False	NA	NA	NA	129779003	129779200	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_129779000_129779200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090417	chr4	+	672	4	NNC	ENSMUSG00000028773.9	novel	823	4	NA	NA	143	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2098.00609044768	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTTGGTCCTC	NA	False	NA	31	True	AATAAA	-20	NA	130202530	130209256	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_130202636_130206083_130206257_130207746_130207849_130208964
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090469	chr4	+	456	1	Genic_Genomic	ENSMUSG00000074088.7	novel	NA	NA	NA	NA	4556	7	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGACTTGGATTTATT	NA	False	NA	29	True	ATTAAA	-30	NA	130283370	130283826	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_+_130283400_130283800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090480	chr4	-	458	1	Intergenic	novelGene_301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACTGGAGAAGTCCTAG	NA	False	NA	NA	False	NA	NA	NA	130360110	130359652	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_-_130359700_130360100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090482	chr4	-	158	1	Intergenic	novelGene_302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTAGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	130362535	130362377	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_-_130362400_130362500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090512	chr4	+	1348	10	FSM	ENSMUSG00000028910.13	ENSMUST00000030742.11	1337	10	-5	-6	-5	6	multi-exon	FALSE	canonical	3	105	junction_6	17.6243378301319	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTGTGGAGGAATGCTGT	NA	False	NA	39	True	AATAAA	-39	NA	131570775	131595103	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_131570990_131581026_131581125_131581895_131582028_131585067_131585212_131588071_131588175_131589086_131589190_131590228_131590303_131592367_131592429_131592566_131592640_131594757
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090550	chr4	-	974	2	Genic_Genomic	ENSMUSG00000083757.3	novel	502	1	NA	NA	-327525	-5	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCAGAATCCTTGATCT	NA	False	NA	NA	False	AATAAA	-35	NA	132275325	131947303	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_131947816_132274863
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090565	chr4	-	233	1	ISM	ENSMUSG00000028901.14	ENSMUST00000168553.8	6523	10	26634	4603	9046	43	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGTTGTAACTGCAAATG	7165	False	NA	-15	True	NA	NA	NA	131953171	131952938	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_131952900_131953200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090572	chr4	+	1351	6	FSM	ENSMUSG00000028899.12	ENSMUST00000030731.11	3787	6	-1	2437	-1	617	multi-exon	FALSE	canonical	3	439	junction_3	32.7987804651331	347	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTGTCCATAGGACCT	NA	False	NA	26	True	AATAAA	-22	NA	132001684	132020640	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_132001799_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090589	chr4	+	855	4	NIC	ENSMUSG00000086290.10	novel	606	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	139	junction_1	29.698484809835	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTTTTTATTTATTTA	NA	False	NA	27	True	AATAAA	-16	NA	132035986	132038335	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_132036219_132037148_132037527_132037761_132037816_132038144
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090591	chr4	+	595	4	NNC	ENSMUSG00000086290.10	novel	935	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	84.7388144044196	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTTTTTATTTATTTA	NA	False	NA	27	True	AATAAA	-16	NA	132035986	132038335	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_132036219_132037148_132037215_132037461_132037527_132038103
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090595	chr4	+	937	4	FSM	ENSMUSG00000086290.10	ENSMUST00000144705.9	935	4	-2	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	29.9369708257569	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTTTTTATTTATTTA	NA	False	NA	27	True	AATAAA	-16	NA	132035986	132038335	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_132036219_132037148_132037215_132037461_132037527_132037761
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090599	chr4	+	588	4	NNC	ENSMUSG00000086290.10	novel	935	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	84.7388144044196	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTTTTTATTTATTTA	NA	False	NA	27	True	AATAAA	-16	NA	132035986	132038335	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_132036219_132037148_132037215_132037461_132037527_132038110
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090611	chr4	+	614	5	NNC	ENSMUSG00000086290.10	novel	606	5	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.6138544980188	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTTTATTTATTTATT	NA	False	NA	29	True	AATAAA	-18	NA	132035986	132038337	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_132036223_132037148_132037215_132037461_132037527_132037761_132037816_132038144
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090613	chr4	+	644	5	FSM	ENSMUSG00000086290.10	ENSMUST00000128000.9	422	5	-220	-2	0	2	multi-exon	FALSE	canonical	1	2	junction_1	86.7478385897885	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTTTATTTATTTATT	NA	False	NA	29	True	AATAAA	-18	NA	132035986	132038337	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_132036253_132037148_132037215_132037461_132037527_132037761_132037816_132038144
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090631	chr4	-	1139	9	FSM	ENSMUSG00000028898.16	ENSMUST00000030730.14	1130	9	-9	0	-9	0	multi-exon	FALSE	canonical	3	451	junction_8	39.2324801663112	386	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCTTCTTCAACTGTAT	2307	False	NA	0	True	AATAAA	-17	NA	132056858	132039073	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132053256_132053357_132055779_132055878_132056663
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090674	chr4	-	391	3	NNC	ENSMUSG00000085241.8	novel	437	3	NA	NA	-2	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	500.5	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGTGTGTGTGTGAGC	NA	False	NA	1	True	ATTAAA	-25	NA	132080946	132079233	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_132079550_132079973_132080010_132080907
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090712	chr4	-	353	2	NNC	ENSMUSG00000085241.8	novel	426	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTGATTTAATGTG	NA	False	NA	-10	True	ATTAAA	-14	NA	132080946	132079244	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_132079555_132080903
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090716	chr4	-	424	3	NNC	ENSMUSG00000085241.8	novel	426	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	497.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTGATTTAATGTG	NA	False	NA	-10	True	ATTAAA	-14	NA	132080944	132079244	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_132079596_132079973_132080010_132080907
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090739	chr4	-	725	1	ISM	ENSMUSG00000028893.9	ENSMUST00000030724.9	3475	10	17745	0	17745	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGCTAATGGGATGTT	402	False	NA	-31	True	AATAAA	-22	NA	132220067	132219342	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_132219300_132220100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090754	chr4	-	271	1	Genic_Genomic	ENSMUSG00000054428.13	novel	NA	NA	NA	NA	2664	1	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGCCTTCTACTGTCTA	3474	False	NA	-19	True	AATAAA	-20	NA	132258135	132257864	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_132257900_132258100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090756	chr4	-	499	3	NNC	ENSMUSG00000054428.13	novel	539	3	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	1	79	junction_1	3895	62	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATGCCTTCTACTGTCT	9274	False	NA	-20	True	AATAAA	-19	NA	132260937	132257865	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_132258128_132260606_132260699_132260792
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090806	chr4	+	1403	9	NNC	ENSMUSG00000054405.15	novel	1401	9	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	1044.63689116123	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGTCTCCTCCTCGGGT	2333	False	NA	19	True	AATAAA	-19	NA	132262862	132281053	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278926_132280327
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090809	chr4	+	1394	9	NNC	ENSMUSG00000054405.15	novel	1401	9	NA	NA	3	1	at_least_one_novel_splicesite	TRUE	canonical	1	77	junction_1	996.416077750655	238	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTCTCCTCCTCGGGTG	2334	False	NA	20	True	AATAAA	-20	NA	132262863	132281054	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_132262970_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090833	chr4	+	1371	9	NNC	ENSMUSG00000054405.15	novel	1401	9	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1044.07961112886	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGATGGTCTCCTCCT	2346	False	NA	14	True	AATAAA	-14	NA	132262875	132281048	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278855_132278922_132280327
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090863	chr4	-	1836	3	FSM	ENSMUSG00000037752.5	ENSMUST00000045550.5	4245	3	12	2397	-6	1212	multi-exon	FALSE	canonical	3	48	junction_1	6.5	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACCACTAAGTGTAGTCT	4056	False	NA	-3	True	ATTAAA	-27	NA	132459845	132454604	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_132455882_132458186_132458384_132459483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090892	chr4	+	1744	8	NIC	ENSMUSG00000028884.15	novel	1813	9	NA	NA	13	-269	intron_retention	FALSE	canonical	3	1317	junction_6	60.4871381167188	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCTGAAATGTTGGTT	NA	False	NA	26	True	GATAAA	-16	NA	132495658	132505794	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090905	chr4	-	908	1	Genic_Genomic	ENSMUSG00000028882.14	novel	NA	NA	NA	NA	5144	5	mono-exon	FALSE	NA	NA	NA	NA	NA	376	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTCTTGAGTCTTACTG	NA	False	NA	-1	True	ATTAAA	-21	NA	132555142	132554234	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_132554200_132555100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090913	chr4	-	1997	7	NNC	ENSMUSG00000028882.14	novel	2037	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	66.7607669218981	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTATGGTCTTGAGTCT	NA	False	NA	-6	True	ATTAAA	-16	NA	132570445	132554239	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_132555518_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568011_132570367
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090919	chr4	-	360	1	ISM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	30649	0	9400	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTTGCACTTGATTGT	NA	False	NA	-4	True	AATAAA	-14	NA	132581171	132580811	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_132580800_132581200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090946	chr4	+	1098	1	ISM	ENSMUSG00000028868.14	ENSMUST00000084241.12	5642	9	68154	0	9641	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGGTGTCTGTGTGTGT	7821	False	NA	44	True	GATAAA	-22	NA	132925969	132927067	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_132926000_132927100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090948	chr4	+	936	6	FSM	ENSMUSG00000028865.15	ENSMUST00000105910.2	986	6	50	0	50	0	multi-exon	FALSE	canonical	3	29	junction_1	9.2736184954957	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGACCTATGTCTTGGG	NA	False	NA	20	True	AATAAA	-22	NA	132948170	132951866	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_132948379_132948753_132948916_132949015_132949088_132949479_132949525_132950913_132951059_132951562
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000090982	chr4	+	802	1	ISM	ENSMUSG00000046694.7	ENSMUST00000051676.7	2287	2	7005	0	7005	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAACTGTATCTTTCTCCT	NA	False	NA	13	True	AATAAA	-17	NA	133214447	133215249	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_133214400_133215200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091048	chr4	-	961	1	ISM	ENSMUSG00000037553.15	ENSMUST00000084238.5	4580	8	25517	1693	5082	1677	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTAGTTTTT	4045	False	NA	-14	True	AATAAA	-21	NA	133335263	133334302	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_133334300_133335300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091066	chr4	-	726	1	ISM	ENSMUSG00000003644.18	ENSMUST00000105894.11	3135	22	39782	0	12915	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCCGCTCTTCCTTCTGC	NA	False	NA	-5	True	AATAAA	-18	NA	133575326	133574600	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_133574600_133575300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091068	chr4	-	1019	2	NNC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	12269	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCCGCTCTTCCTTCTGC	NA	False	NA	-5	True	AATAAA	-18	NA	133575972	133574600	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_133575486_133575838
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091078	chr4	-	1167	6	NNC	ENSMUSG00000003038.16	novel	1265	6	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	105	junction_2	1075.89802490757	44	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCTCTGATCTTTCCC	NA	False	NA	NA	False	AATAAA	-24	NA	133695218	133692049	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_133692885_133693261_133693355_133693739_133693791_133694076_133694107_133694267_133694313_133695105
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091130	chr4	+	995	8	NNC	ENSMUSG00000012126.17	novel	685	3	NA	NA	-5374	7	at_least_one_novel_splicesite	TRUE	canonical	3	16	junction_1	29.7506645441127	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAAGGCTCTCCAGAGAG	NA	False	NA	22	True	AATAAA	-22	NA	133845405	133854094	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_133845473_133850702_133850915_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091159	chr4	-	1543	1	ISM	ENSMUSG00000037443.14	ENSMUST00000040271.12	3893	14	55712	0	1242	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGTTTCCTAGTGCCTC	6615	False	NA	NA	False	AATAAA	-15	NA	133858711	133857168	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_133857200_133858700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091234	chr4	+	1468	4	NIC	ENSMUSG00000028832.12	novel	1060	5	NA	NA	0	-4	intron_retention	FALSE	canonical	3	455	junction_1	267.265577448516	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTCTTTCTGTTCAGG	NA	False	NA	7	True	AATAAA	-23	NA	134195709	134201150	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_134195741_134197413_134198151_134200114_134200307_134200642
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091235	chr4	+	987	5	FSM	ENSMUSG00000028832.12	ENSMUST00000105867.8	802	5	-10	-175	0	-4	multi-exon	FALSE	canonical	1	1	junction_4	432.634011030108	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTCTTTCTGTTCAGG	NA	False	NA	7	True	AATAAA	-23	NA	134195709	134201150	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_134195741_134197413_134197487_134197977_134198151_134200114_134200307_134200632
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091236	chr4	+	1059	5	NIC	ENSMUSG00000028832.12	novel	1060	5	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	447.628473178371	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTCTTTCTGTTCAGG	NA	False	NA	7	True	AATAAA	-23	NA	134195709	134201150	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_134195741_134197331_134197487_134197977_134198151_134200114_134200307_134200642
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091238	chr4	+	1699	2	FSM	ENSMUSG00000028832.12	ENSMUST00000130253.2	612	2	0	-1087	0	1087	multi-exon	FALSE	canonical	3	455	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAATGAAAAGTTTAACAAA	NA	False	NA	NA	False	NA	NA	NA	134195709	134199081	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_134195741_134197413
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091258	chr4	+	1203	3	NNC	ENSMUSG00000078521.3	novel	1275	3	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	224	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTGGTGTCGTGCTT	NA	False	NA	18	True	AATAAA	-18	NA	134238334	134251236	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_134238481_134248782_134248913_134250309
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091283	chr4	-	539	1	ISM	ENSMUSG00000028826.15	ENSMUST00000150031.2	4132	3	7916	0	7916	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCCTGCCTTTTTAA	8017	False	NA	NA	False	AATAAA	-20	NA	134530608	134530069	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_134530100_134530600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091307	chr4	-	1201	7	NNC	ENSMUSG00000028822.12	novel	1204	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	246.412932561043	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCTCGTTATACCTT	NA	False	NA	-20	True	ATTAAA	-19	NA	134642326	134625159	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_134625788_134628010_134628072_134630954_134631054_134632654_134632723_134636923_134637037_134640401_134640507_134642199
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091309	chr4	-	1071	6	NIC	ENSMUSG00000028822.12	novel	1204	7	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	246.504685553845	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCTCGTTATACCTT	NA	False	NA	-20	True	ATTAAA	-19	NA	134642307	134625159	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923_134637037_134642199
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091320	chr4	+	2726	4	FSM	ENSMUSG00000037266.19	ENSMUST00000148900.8	3051	4	33	292	-1	7	multi-exon	FALSE	canonical	3	813	junction_2	40.8493165997507	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTTGAATGTGTCTGTC	NA	False	NA	28	True	AATAAA	-28	NA	134650935	134654690	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_134651079_134651185_134651794_134652603_134654130_134654241
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091326	chr4	+	1390	4	ISM	ENSMUSG00000037266.19	ENSMUST00000145364.8	2151	6	1678	0	-123	0	3prime_fragment	FALSE	canonical	3	46	junction_2	388.257932594071	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134652633	134654683	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_134652744_134653087_134653133_134653336_134654130_134654241
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091328	chr4	+	680	4	ISM	ENSMUSG00000037266.19	ENSMUST00000154837.8	734	5	864	0	-122	0	3prime_fragment	FALSE	canonical	3	31	junction_2	392.429469954652	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134652634	134654683	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_134652744_134653087_134653133_134654045_134654130_134654241
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091336	chr4	+	1407	7	FSM	ENSMUSG00000028821.9	ENSMUST00000030622.3	1369	7	-38	0	-38	0	multi-exon	FALSE	canonical	3	670	junction_5	39.6628149390445	1443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGTCTGTAACTTAAACA	NA	False	NA	NA	False	AATAAA	-24	NA	134658170	134664859	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_134658330_134658490_134658596_134661766_134661893_134662242_134662361_134662684_134662776_134663293_134663393_134664150
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091339	chr4	+	1296	7	NNC	ENSMUSG00000028821.9	novel	1369	7	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	273.66808769424	656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGTCTGTAACTTAAACA	NA	False	NA	NA	False	AATAAA	-24	NA	134658278	134664859	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_134658327_134658490_134658596_134661766_134661893_134662242_134662361_134662684_134662776_134663293_134663393_134664150
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091358	chr4	+	603	3	Intergenic	novelGene_303	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCGTTGTCATTCATGA	NA	False	NA	NA	False	AATAAA	-16	NA	134697545	134710999	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_134697650_134701540_134701704_134710663
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091363	chr4	-	613	4	Intergenic	novelGene_304	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	1.63299316185545	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCCTTAGTCCTGGTGT	NA	False	NA	NA	False	NA	NA	NA	134778969	134772987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_-_134773142_134773325_134773387_134778475_134778691_134778786
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091392	chr4	+	405	2	Antisense	novelGene_ENSMUSG00000043924.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTTGTTGGCTTGGAG	NA	False	NA	NA	False	NA	NA	NA	135095909	135098804	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr4_+_135096077_135098566
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091404	chr4	-	317	1	ISM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	45415	0	5855	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGGGTCCTGTGTTGCAC	NA	False	NA	-3	True	ATTAAA	-22	NA	135176519	135176202	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_135176200_135176500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091406	chr4	-	211	1	ISM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	42904	2617	3344	377	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCAGCTTTCTTCCTGTT	NA	False	NA	1	True	NA	NA	NA	135179030	135178819	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_135178800_135179000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091431	chr4	+	307	1	ISM	ENSMUSG00000062157.7	ENSMUST00000074408.7	4182	7	21588	0	21588	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAATGTGCACGCAGTTGT	1167	False	NA	7	True	AATAAA	-21	NA	135435185	135435492	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_135435200_135435500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091436	chr4	+	313	1	Genic_Genomic	ENSMUSG00000037139.16	novel	NA	NA	NA	NA	14612	4	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCGTGGTCTCTGAAAT	NA	False	NA	NA	False	AATAAA	-33	NA	135542566	135542879	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_+_135542600_135542900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091467	chr4	+	1406	1	Genic_Genomic	ENSMUSG00000028676.18	novel	NA	NA	NA	NA	1131	16	mono-exon	FALSE	NA	NA	NA	NA	NA	718	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATAGTTCTGAATGAG	NA	False	NA	NA	False	AATAAA	-33	NA	135591736	135593142	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_+_135591700_135593100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091471	chr4	+	858	1	ISM	ENSMUSG00000028676.18	ENSMUST00000126641.2	3754	6	13304	0	5756	0	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTTTCTGTAGACT	NA	False	NA	23	True	AATAAA	-28	NA	135596361	135597219	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_135596400_135597200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091496	chr4	+	1426	9	FSM	ENSMUSG00000028672.14	ENSMUST00000030432.8	1418	9	-2	-6	-2	6	multi-exon	FALSE	canonical	3	659	junction_3	79.965617611571	320	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTTATGGGTGGAGG	NA	False	NA	NA	False	ATTAAA	-29	NA	135673756	135689934	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_135673852_135677860_135677945_135679681_135679790_135681167_135681264_135682897_135683047_135686033_135686098_135687287_135687477_135688093_135688220_135689419
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091504	chr4	+	1444	11	FSM	ENSMUSG00000028671.17	ENSMUST00000102541.10	1430	11	-10	-4	-10	4	multi-exon	FALSE	canonical	3	107	junction_1	18.7712546197637	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTCACAGATGGCCACG	4552	False	NA	15	True	AATAAA	-23	NA	135691027	135695493	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_135691100_135692644_135692768_135692876_135692993_135693313_135693428_135693680_135693858_135694123_135694238_135694322_135694390_135694481_135694568_135694662_135694741_135694899_135695015_135695111
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091526	chr4	-	572	1	ISM	ENSMUSG00000028669.16	ENSMUST00000105851.9	1700	6	11091	142	2941	-142	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTCTTTTCTTCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	135703484	135702912	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_135702900_135703500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091528	chr4	-	1109	3	FSM	ENSMUSG00000028669.16	ENSMUST00000123737.2	530	3	213	-792	213	-142	multi-exon	FALSE	canonical	3	537	junction_2	20	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTCTTTTCTTCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	135706212	135702912	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_135703808_135704459_135704569_135706107
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091553	chr4	-	626	6	NNC	ENSMUSG00000059291.16	novel	833	6	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5002.5285446462	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGTGTGTTTGTGAAAG	NA	False	NA	1	True	AATAAA	-45	NA	135780704	135777252	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779032_135779877_135780029_135780654
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091574	chr4	-	773	6	NNC	ENSMUSG00000059291.16	novel	833	6	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5002.5285446462	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACAGTTGTGTGTTTGT	NA	False	NA	-4	True	AATAAA	-40	NA	135780667	135777257	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779032_135779877_135780029_135780465
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091576	chr4	-	587	6	NNC	ENSMUSG00000059291.16	novel	833	6	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4821.82436843152	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACAGTTGTGTGTTTGT	NA	False	NA	-4	True	AATAAA	-40	NA	135780686	135777257	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_135777328_135777590_135777686_135778477_135778614_135778924_135779032_135779877_135780029_135780658
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091580	chr4	-	590	6	NNC	ENSMUSG00000059291.16	novel	833	6	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4365.77095138991	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACAGTTGTGTGTTTGT	NA	False	NA	-4	True	AATAAA	-40	NA	135780684	135777257	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_135777328_135777590_135777702_135778484_135778614_135778924_135779028_135779877_135780029_135780658
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091581	chr4	-	1227	5	FSM	ENSMUSG00000059291.16	ENSMUST00000125726.8	807	5	-377	-43	20	0	multi-exon	FALSE	canonical	3	383	junction_1	4361.44284469027	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACAGTTGTGTGTTTGT	NA	False	NA	-4	True	AATAAA	-40	NA	135780684	135777257	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779032_135779877
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091598	chr4	-	1376	5	NIC	ENSMUSG00000059291.16	novel	833	6	NA	NA	21	0	intron_retention	FALSE	canonical	3	383	junction_1	4296.24384637325	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACAGTTGTGTGTTTGT	NA	False	NA	-4	True	AATAAA	-40	NA	135780683	135777257	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_135777328_135777590_135778614_135778924_135779032_135779877_135780029_135780658
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091662	chr4	+	1053	1	FSM	ENSMUSG00000066037.15	ENSMUST00000182327.2	3948	1	626	2269	626	16	mono-exon	FALSE	NA	NA	NA	NA	NA	490	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGTCTAAAACATTACTT	NA	False	NA	48	True	AATAAA	-42	NA	136066955	136068008	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_136067000_136068000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091682	chr4	-	2067	6	NNC	ENSMUSG00000006699.18	novel	2108	6	NA	NA	20	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	724.061765321164	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCTGAAGGTTATTTT	NA	False	NA	-5	True	ATTAAA	-20	NA	137084990	137047010	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063281_137063441_137084956
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091695	chr4	-	230	1	ISM	ENSMUSG00000006699.18	ENSMUST00000030417.10	1448	6	35708	0	35708	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTGGTGAAGCTTTATTC	NA	False	NA	NA	False	ATTAAA	-23	NA	137049302	137049072	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_137049100_137049300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091707	chr4	+	1085	7	ISM	ENSMUSG00000028763.19	ENSMUST00000171332.2	14176	97	38989	58546	-14667	-16814	internal_fragment	FALSE	canonical	3	21	junction_1	5.85234995535981	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGCCGTCCCTAGT	NA	False	NA	NA	False	ATTAAA	-15	NA	137235102	137239394	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_137235222_137235320_137235380_137235614_137235776_137237852_137237982_137238217_137238473_137238556_137238677_137239152
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091717	chr4	+	212	1	ISM	ENSMUSG00000043411.16	ENSMUST00000105840.8	5741	27	61992	2188	-1263	12	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTGTTTCAGATTTTCT	NA	False	NA	20	True	AATAAA	-32	NA	137383442	137383654	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_137383400_137383700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091755	chr4	+	463	1	ISM	ENSMUSG00000028759.14	ENSMUST00000105827.8	5155	13	26397	1528	13036	7	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACAGCTTAGTGAAAAGTT	5496	False	NA	27	True	AATAAA	-25	NA	137970003	137970466	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_137970000_137970500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091774	chr4	+	357	1	FSM	ENSMUSG00000083326.5	ENSMUST00000117723.2	215	1	-68	-74	-68	74	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACCACCACCACTGCCA	5563	False	NA	NA	False	NA	NA	NA	138153030	138153387	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_138153000_138153400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091796	chr4	+	1190	1	ISM	ENSMUSG00000046447.4	ENSMUST00000050918.4	4444	2	2641	1979	2641	-1979	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTCGTTAGCCTTGTTT	8385	False	NA	19	True	AATAAA	-19	NA	138184265	138185455	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_138184300_138185500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091815	chr4	-	167	1	Genic_Genomic	ENSMUSG00000043621.14	novel	NA	NA	NA	NA	6157	5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTGAAGGCGTCCAA	NA	False	NA	NA	False	AATAAA	-18	NA	138446010	138445843	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_138445800_138446000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091821	chr4	-	364	1	Genic_Genomic	ENSMUSG00000041193.16	novel	NA	NA	NA	NA	10219	3	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGTGTATGCTAGTG	NA	False	NA	3	True	AATAAA	-32	NA	138526915	138526551	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_138526600_138526900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091839	chr4	-	537	4	NNC	ENSMUSG00000050608.12	novel	2549	4	NA	NA	52	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1250.52877704682	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTATTCCTTTATGTT	5231	False	NA	-7	True	AATAAA	-29	NA	138858372	138831088	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_138831324_138832300_138832411_138833162_138833215_138858232
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091854	chr4	-	231	1	ISM	ENSMUSG00000050608.12	ENSMUST00000143971.2	2549	4	27101	1968	1947	9	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGCCTTTATTCCTTTA	5156	False	NA	-11	True	AATAAA	-25	NA	138831323	138831092	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_138831100_138831300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091856	chr4	-	502	4	NNC	ENSMUSG00000050608.12	novel	2549	4	NA	NA	-50	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1252.05573180891	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGCCTTTATTCCTTTA	5248	False	NA	-11	True	AATAAA	-25	NA	138858355	138831092	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_138831324_138832300_138832411_138833166_138833215_138858242
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091970	chr4	-	956	8	NNC	ENSMUSG00000028741.14	novel	1221	8	NA	NA	-15	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	363.817738625779	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTTTCTTTTTTTTTTT	5946	False	NA	-9	True	AATAAA	-37	NA	139079637	139074752	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_139075117_139075231_139075309_139075631_139075784_139076000_139076061_139076316_139076399_139076924_139077029_139077746_139077806_139079579
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091971	chr4	-	986	8	NNC	ENSMUSG00000028741.14	novel	1221	8	NA	NA	-15	3	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_6	362.89386765785	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTTTCTTTTTTTTTTT	5946	False	NA	-9	True	AATAAA	-37	NA	139079637	139074752	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_139075117_139075231_139075309_139075631_139075784_139075992_139076061_139076316_139076399_139076924_139077051_139077746_139077806_139079579
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000091974	chr4	-	1172	7	NIC	ENSMUSG00000028741.14	novel	1221	8	NA	NA	-14	3	intron_retention	FALSE	canonical	3	786	junction_4	127.076639167953	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTTTCTTTTTTTTTTT	5947	False	NA	-9	True	AATAAA	-37	NA	139079636	139074752	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_139075117_139075231_139075309_139075631_139076061_139076316_139076399_139076924_139077029_139077746_139077806_139079579
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092029	chr4	-	613	6	ISM	ENSMUSG00000040964.17	ENSMUST00000143614.8	706	8	32373	-86	78	86	3prime_fragment	FALSE	canonical	3	178	junction_1	18.8531164532551	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCACCGAGGGTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	140344298	140319156	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092038	chr4	-	300	1	Intergenic	novelGene_305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTAGGGGAGGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	140420996	140420696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_-_140420700_140421000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092054	chr4	+	1349	1	ISM	ENSMUSG00000040945.14	ENSMUST00000071169.9	3999	15	21331	0	7494	0	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGCTTTCATGATTCCT	NA	False	NA	28	True	AATAAA	-21	NA	140449182	140450531	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_140449200_140450500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092111	chr4	+	948	8	NNC	ENSMUSG00000009863.15	novel	1142	8	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1403.55637214752	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCGTTACTCTCCATTAT	NA	False	NA	NA	False	AATAAA	-14	NA	140688705	140706504	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_140688788_140693811_140693944_140698447_140698534_140700193_140700331_140700974_140701092_140703425_140703528_140704688_140704812_140706335
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092118	chr4	+	176	1	Genic_Genomic	ENSMUSG00000009863.15	novel	NA	NA	NA	NA	17620	5	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACTCTCCATTATTACCA	4106	False	NA	NA	False	AATAAA	-19	NA	140706333	140706509	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_+_140706300_140706500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092133	chr4	-	796	1	ISM	ENSMUSG00000040842.18	ENSMUST00000148204.8	3202	4	25917	14	25917	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTCCTCATTTCTG	4656	False	NA	-14	True	TATAAA	-33	NA	140841121	140840325	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_140840300_140841100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092142	chr4	-	458	1	ISM	ENSMUSG00000040842.18	ENSMUST00000148204.8	3202	4	23957	2312	23957	1254	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTCTTTTTTTTTTTTT	2696	False	NA	-19	True	NA	NA	NA	140843081	140842623	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_140842600_140843100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092147	chr4	-	932	4	FSM	ENSMUSG00000040842.18	ENSMUST00000148204.8	3202	4	-42	2312	-3	1254	multi-exon	FALSE	canonical	3	37	junction_2	172.554017307303	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTCTTTTTTTTTTTTT	NA	False	NA	-19	True	NA	NA	NA	140867080	140842623	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_140843176_140845837_140846090_140847634_140847685_140867002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092174	chr4	+	435	1	ISM	ENSMUSG00000006218.5	ENSMUST00000006380.5	1433	7	15520	1	15520	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAACTTGACCTGGTCTT	3948	False	NA	12	True	ATTAAA	-18	NA	141111050	141111485	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_141111000_141111500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092190	chr4	-	964	5	NNC	ENSMUSG00000006216.11	novel	2370	20	NA	NA	-2664	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.2182538049648	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTAGTGTCCCCTCTCC	4471	False	NA	-8	True	AATAAA	-14	NA	141135332	141131667	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_141131944_141132199_141132447_141132582_141132672_141134399_141134534_141135114
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092265	chr4	+	180	1	ISM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	20559	1626	-587	663	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGCCTGTATTGTCCCTA	NA	False	NA	11	True	AATAAA	-21	NA	141541481	141541661	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_141541500_141541700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092303	chr4	-	546	1	ISM	ENSMUSG00000040616.4	ENSMUST00000036572.4	1875	3	52767	0	52767	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGACCTCATTCAGTCA	NA	False	NA	-6	True	AATAAA	-18	NA	141758848	141758302	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_141758300_141758800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092315	chr4	-	183	1	Intergenic	novelGene_306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAGAAAGAGCTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	141893268	141893085	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_-_141893100_141893300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092318	chr4	+	104	1	Intergenic	novelGene_307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGGCACTGGGATTTTT	NA	False	NA	NA	False	AATAAA	-30	NA	142944779	142944883	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_142944800_142944900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092329	chr4	+	155	1	Intergenic	novelGene_308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTTTTTTTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	143069891	143070046	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_143069900_143070000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092343	chr4	+	915	2	Intergenic	novelGene_309	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCAGCTACAATCAGCTG	NA	False	NA	NA	False	NA	NA	NA	143714427	143715401	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_143715073_143715131
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092346	chr4	-	585	2	Intergenic	novelGene_310	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGAAAAGAAGAAAGATCGA	NA	False	NA	NA	False	NA	NA	NA	143715105	143714446	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_-_143714738_143714811
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092366	chr4	+	192	1	Intergenic	novelGene_311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGTCTGGTCGGT	NA	False	NA	6	True	NA	NA	NA	144130315	144130507	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_144130300_144130500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092391	chr4	+	2041	4	NNC	ENSMUSG00000085101.8	novel	545	3	NA	NA	16	4051	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	42.5910788780937	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCCTGATTTTTTTAAT	NA	False	NA	26	True	ATTAAA	-22	NA	145136851	145180377	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_145136997_145138756_145138851_145176036_145177478_145180016
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092408	chr4	+	2416	4	NNC	ENSMUSG00000082082.2	novel	1575	3	NA	NA	-14304	777	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	39.6007856263259	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	21	True	NA	NA	NA	145159005	145178235	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_145159032_145173065_145173342_145176036_145176277_145176361
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092418	chr4	+	1555	3	NNC	ENSMUSG00000082082.2	novel	1575	3	NA	NA	-14303	777	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	16.5	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	21	True	NA	NA	NA	145159006	145178235	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_145159032_145176036_145176529_145177197
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092422	chr4	+	1624	4	NNC	ENSMUSG00000082082.2	novel	1575	3	NA	NA	-14303	777	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	40.5490101262931	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	21	True	NA	NA	NA	145159006	145178235	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_145159032_145160315_145160385_145176036_145176529_145177197
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092429	chr4	+	2413	3	Fusion	ENSMUSG00000082082.2_ENSMUSG00000085101.8	novel	375	3	NA	NA	-14303	777	multi-exon	FALSE	canonical	3	28	junction_1	34.5	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	21	True	NA	NA	NA	145159006	145178235	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr4_+_145159152_145160315_145160385_145176036
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092455	chr4	+	1678	2	Fusion	ENSMUSG00000078503.10_ENSMUSG00000082352.2	novel	3044	5	NA	NA	-47	767	multi-exon	FALSE	canonical	1	4	junction_1	0	146	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTAGTATTGTTGTCCT	4972	False	NA	NA	False	AGTAAA	-10	NA	145241406	145302498	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr4_+_145241589_145301002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092464	chr4	+	818	5	Fusion	ENSMUSG00000078503.10_ENSMUSG00000058186.14	novel	1938	3	NA	NA	-20	-1375	multi-exon	FALSE	canonical	0	0	junction_2	212.74926556865	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAGTGAAATGAGCACTT	4999	False	NA	NA	False	AATAAA	-33	NA	145241433	145427835	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr4_+_145241589_145314001_145314095_145422723_145422806_145425813_145425941_145427474
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092512	chr4	+	809	7	Fusion	ENSMUSG00000078502.11_ENSMUSG00000084350.2	novel	2413	3	NA	NA	-13	-2021	multi-exon	TRUE	canonical	2	3	junction_5	75.0631215859174	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	145311759	145554491	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr4_+_145311905_145510590_145510684_145516045_145516128_145541336_145541406_145551778_145551837_145552678_145552806_145554256
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092514	chr4	+	744	6	Fusion	ENSMUSG00000078502.11_ENSMUSG00000084350.2	novel	2413	3	NA	NA	-13	-2021	multi-exon	FALSE	canonical	0	0	junction_3	88.6823545018963	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	145311759	145554491	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr4_+_145311905_145510590_145510684_145516045_145516132_145551778_145551837_145552678_145552806_145554256
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092515	chr4	+	772	7	Fusion	ENSMUSG00000078502.11_ENSMUSG00000084350.2	novel	2498	5	NA	NA	-13	-2021	multi-exon	FALSE	canonical	0	0	junction_5	75.5544321811912	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	145311759	145554491	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr4_+_145311905_145510590_145510684_145516045_145516128_145541336_145541383_145551778_145551841_145552696_145552806_145554256
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092516	chr4	+	740	6	Fusion	ENSMUSG00000078502.11_ENSMUSG00000084350.2	novel	2413	3	NA	NA	-13	-2021	multi-exon	FALSE	canonical	2	3	junction_4	86.7156271960251	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	145311759	145554491	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr4_+_145311905_145510590_145510684_145516045_145516128_145551778_145551837_145552678_145552806_145554256
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092517	chr4	+	708	6	Fusion	ENSMUSG00000078502.11_ENSMUSG00000084350.2	novel	2498	5	NA	NA	-13	-2021	multi-exon	FALSE	canonical	0	0	junction_4	98.4873595950262	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	145311759	145554491	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr4_+_145311905_145510590_145510684_145541336_145541383_145551778_145551841_145552678_145552806_145554256
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092520	chr4	+	727	6	Fusion	ENSMUSG00000078502.11_ENSMUSG00000084350.2	novel	2413	3	NA	NA	-13	-2021	multi-exon	FALSE	canonical	2	3	junction_4	98.0053059788091	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	145311759	145554491	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr4_+_145311905_145510590_145510684_145541336_145541406_145551778_145551837_145552678_145552806_145554256
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092531	chr4	+	834	4	NNC	ENSMUSG00000078502.11	novel	3595	4	NA	NA	-13	36461	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_3	44.5446093508768	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAACTTAAAAAGGTCTTT	NA	False	NA	NA	False	NA	NA	NA	145311759	145388376	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_145312083_145314001_145314095_145319501_145319572_145388028
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092533	chr4	+	904	6	Fusion	ENSMUSG00000078502.11_ENSMUSG00000084350.2	novel	2498	5	NA	NA	-13	-2021	multi-exon	FALSE	canonical	0	0	junction_4	87.2522779072272	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	145311759	145554491	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr4_+_145312083_145510590_145510684_145516045_145516128_145551778_145551841_145552696_145552806_145554256
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092534	chr4	+	868	6	Fusion	ENSMUSG00000078502.11_ENSMUSG00000084350.2	novel	2498	5	NA	NA	-13	-2021	multi-exon	FALSE	canonical	0	0	junction_4	98.5446091879206	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	145311759	145554491	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr4_+_145312083_145510590_145510684_145541336_145541383_145551778_145551841_145552696_145552806_145554256
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092536	chr4	+	1370	8	Fusion	ENSMUSG00000078502.11_ENSMUSG00000058186.14	novel	1938	3	NA	NA	-13	3476	multi-exon	FALSE	canonical	0	0	junction_6	40.3191350733275	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATTCTGATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	145311759	145434487	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr4_+_145312083_145314001_145314095_145319501_145319572_145399301_145399395_145406465_145406546_145422720_145422810_145425813_145425941_145433992
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092543	chr4	+	706	5	Fusion	ENSMUSG00000078502.11_ENSMUSG00000058186.14	novel	1938	3	NA	NA	-10	-1474	multi-exon	FALSE	canonical	0	0	junction_2	187.491833155474	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTCTTCTATCATTAGTC	NA	False	NA	NA	False	TATAAA	-21	NA	145311762	145427736	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr4_+_145311905_145314001_145314095_145422723_145422806_145425813_145425941_145427474
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092608	chr4	+	719	7	Fusion	ENSMUSG00000094417.2_ENSMUSG00000084350.2_ENSMUSG00000078500.4	novel	2413	3	NA	NA	-87	-799	multi-exon	FALSE	canonical	0	0	junction_6	109.620050882836	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	145501201	145625733	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr4_+_145501361_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256_145554395_145625635
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092642	chr4	+	914	6	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43778	-2018	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	111.708549359483	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGTAAACAGTTTAACTT	NA	False	NA	NA	False	AATACA	-5	NA	145508028	145554494	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_145508381_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092659	chr4	+	388	4	Intergenic	novelGene_312	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	50	junction_1	89.8480198260744	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTCTTCTCTGGTAA	NA	False	NA	NA	False	NA	NA	NA	145508060	145516099	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_145508131_145508209_145508381_145510590_145510684_145516045
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092681	chr4	+	658	5	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43742	-2021	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	173.748920859958	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	145508064	145554491	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_145508210_145510590_145510684_145551778_145551837_145552678_145552806_145554256
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092690	chr4	+	876	7	Fusion	ENSMUSG00000084350.2_ENSMUSG00000078500.4	novel	2413	3	NA	NA	-43742	-799	multi-exon	FALSE	canonical	0	0	junction_6	112.739744544681	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	145508064	145625733	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr4_+_145508381_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256_145554395_145625635
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092714	chr4	+	901	6	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43720	-2021	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	99.7428694193224	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	145508086	145554491	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_145508425_145510590_145510684_145541336_145541383_145551778_145551841_145552678_145552806_145554256
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092734	chr4	+	2744	3	NIC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	-23	3	combination_of_known_splicesites	FALSE	canonical	3	72	junction_2	50	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146033844	146063194	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_146034017_146054375_146054480_146060726
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092736	chr4	+	2872	4	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	-20	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	92.2761555814333	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146033847	146063194	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146034017_146054375_146054484_146058453_146058581_146060726
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092737	chr4	+	2699	5	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	-20	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	82.8322853723112	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146033847	146063194	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146034017_146054375_146054480_146058453_146058581_146060726_146061381_146061549
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092740	chr4	+	2948	5	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	-20	3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	79.6131270582936	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146033847	146063194	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146034017_146043550_146043631_146054375_146054480_146058453_146058581_146060726
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092765	chr4	+	718	6	Fusion	ENSMUSG00000085525.8_ENSMUSG00000066007.16	novel	4244	5	NA	NA	17	38389	multi-exon	FALSE	canonical	0	0	junction_1	97.1328986492218	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146093410	146253393	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr4_+_146093548_146209452_146209546_146214922_146215005_146250678_146250741_146251597_146251707_146253158
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092768	chr4	+	764	7	Fusion	ENSMUSG00000085525.8_ENSMUSG00000066007.16	novel	4244	5	NA	NA	17	38389	multi-exon	TRUE	canonical	0	0	junction_1	87.4890469335067	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146093410	146253393	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr4_+_146093548_146209452_146209546_146214922_146215005_146240246_146240293_146250678_146250741_146251597_146251707_146253158
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092770	chr4	+	682	6	Fusion	ENSMUSG00000085525.8_ENSMUSG00000066007.16	novel	4244	5	NA	NA	17	38389	multi-exon	FALSE	canonical	0	0	junction_1	40.5393635865192	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146093410	146253393	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr4_+_146093548_146209452_146209546_146240246_146240293_146250678_146250741_146251597_146251707_146253158
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092773	chr4	+	732	6	Fusion	ENSMUSG00000085525.8_ENSMUSG00000066007.16	novel	4244	5	NA	NA	17	38389	multi-exon	FALSE	canonical	0	0	junction_1	96.7131842098067	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146093410	146253393	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr4_+_146093548_146209452_146209546_146214922_146215005_146250678_146250737_146251579_146251707_146253158
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092862	chr4	+	708	6	Fusion	ENSMUSG00000070605.5_ENSMUSG00000085525.8	novel	4550	4	NA	NA	2	-4077	multi-exon	FALSE	canonical	3	35	junction_4	247.625039121653	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146206902	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr4_+_146207052_146209452_146209546_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092894	chr4	+	772	7	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	6	38389	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	154.074026219722	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146206906	146253393	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146207052_146209452_146209546_146214922_146215005_146240246_146240293_146250678_146250741_146251597_146251707_146253158
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092895	chr4	+	731	6	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	6	38389	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	160.827112142201	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146206906	146253393	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146207052_146209452_146209546_146240246_146240316_146250678_146250741_146251579_146251707_146253158
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092901	chr4	+	644	5	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	6	38389	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	178.045464699329	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146206906	146253393	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146207052_146209452_146209546_146250678_146250741_146251597_146251707_146253158
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092909	chr4	+	829	5	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	6	38389	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	94.4996693115907	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146206906	146253393	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146207223_146209452_146209546_146250678_146250737_146251579_146251707_146253158
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092914	chr4	+	534	3	NNC	ENSMUSG00000085525.8	novel	282	3	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_2	40	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTGCTGTTCACATTTC	NA	False	NA	35	True	NA	NA	NA	146206906	146215006	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146207267_146209452_146209546_146214925
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092948	chr4	+	615	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-309910	-4077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	317.812051376281	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146223569	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146223715_146533486_146533533_146547961_146548024_146548860_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000092972	chr4	+	720	6	Intergenic	novelGene_313	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	240.53723204527	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	2283	False	NA	NA	False	NA	NA	NA	146289341	146319730	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_146289526_146291416_146291510_146312866_146312972_146316363_146316491_146317966_146318083_146319635
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093006	chr4	+	2784	6	Intergenic	novelGene_314	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_4	46.9084214187602	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	146365086	146393561	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_146365259_146384326_146384431_146388486_146388614_146390758_146391620_146391956_146392589_146392673
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093013	chr4	+	1548	3	Intergenic	novelGene_315	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	21	junction_2	9.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTTGCTTAAATTTGC	NA	False	NA	NA	False	AATAAA	-23	NA	146370011	146387336	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_146370163_146384326_146384431_146386043
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093014	chr4	+	3058	3	Intergenic	novelGene_316	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	33	junction_2	3.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	146370011	146393561	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_146370163_146384326_146384431_146390758
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093016	chr4	+	3185	4	Intergenic	novelGene_317	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	40	junction_1	34.5864456430872	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	146370011	146393561	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_146370163_146384326_146384431_146388486_146388614_146390758
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093026	chr4	+	851	4	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-216469	3413	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	190.482428469283	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATTCTGATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	146370014	146627265	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146370163_146616529_146616611_146619877_146620005_146626770
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093034	chr4	+	687	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-163459	-4077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	304.759971124818	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146370020	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146370163_146502756_146502850_146533486_146533533_146547961_146548024_146548878_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093047	chr4	+	768	7	NNC	ENSMUSG00000063245.12	novel	387	3	NA	NA	-325381	5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	42.8330090778907	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146370036	146742069	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146370163_146697966_146698060_146703608_146703692_146728915_146728962_146739355_146739414_146740256_146740384_146741834
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093067	chr4	+	956	5	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159917	3413	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	167.298199332808	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATTCTGATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	146426566	146627265	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146426724_146597241_146597335_146616526_146616611_146619877_146620005_146626770
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093102	chr4	+	628	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-40310	-4077	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	313.418550025361	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146493169	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146493332_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093107	chr4	+	827	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-40307	-4077	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	270.75722007404	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146493172	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146493332_146502756_146502850_146508052_146508139_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093122	chr4	+	710	6	NNC	ENSMUSG00000063245.12	novel	387	3	NA	NA	-202237	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	92.6701677995675	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146493180	146742069	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146493332_146697966_146698060_146728915_146728962_146739355_146739414_146740256_146740384_146741834
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093207	chr4	+	798	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33256	-4077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	261.217927324209	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146500223	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146500373_146502756_146502850_146508052_146508139_146533486_146533533_146547961_146548024_146548860_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093262	chr4	+	774	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33252	-4077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	297.80154465684	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146500227	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146500373_146502756_146502850_146508052_146508143_146547935_146548020_146548860_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093263	chr4	+	752	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33252	-4077	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	278.838513600017	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146500227	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146500373_146502756_146502850_146533486_146533533_146541117_146541166_146547961_146548020_146548860_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093264	chr4	+	817	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33252	-4077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	272.549536781848	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146500227	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146500373_146502756_146502850_146508052_146508143_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093269	chr4	+	727	6	NNC	ENSMUSG00000063245.12	novel	387	3	NA	NA	-195190	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	141.157217314596	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146500227	146742069	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146500373_146697966_146698060_146703608_146703692_146739355_146739418_146740274_146740384_146741834
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093277	chr4	+	907	8	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33252	-4077	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_5	259.139628267804	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146500227	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146500373_146502756_146502850_146508052_146508139_146533486_146533533_146541048_146541166_146547961_146548020_146548860_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093280	chr4	+	565	4	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33252	-4077	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	371.72600423191	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146500227	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146500373_146547961_146548020_146548860_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093292	chr4	+	919	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33252	-4077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	300.402663104041	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146500227	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146500544_146502756_146502850_146508052_146508139_146547961_146548024_146548860_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093293	chr4	+	829	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33252	-4077	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	325.843904346851	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146500227	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146500544_146502756_146502850_146547961_146548020_146548860_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093297	chr4	+	992	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33252	-4077	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_4	278.893647591096	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146500227	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146500544_146502756_146502850_146533486_146533533_146541048_146541166_146547961_146548020_146548860_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093366	chr4	+	701	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33230	-4077	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	86.480055504145	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146500249	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146500373_146502756_146502850_146533486_146533556_146547961_146548020_146548860_146548984_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093418	chr4	+	560	4	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16645	-4074	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	376.009160644909	74	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGTAAACAGTTTAACTT	1849	False	NA	NA	False	AATACA	-5	NA	146516834	146550675	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146516986_146547961_146548024_146548878_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093429	chr4	+	663	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16645	-4077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	323.282384302022	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1849	False	NA	NA	False	AATACA	-2	NA	146516834	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146517032_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093448	chr4	+	735	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16642	-4077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	306.257016246159	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1852	False	NA	NA	False	AATACA	-2	NA	146516837	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146516986_146533486_146533533_146541048_146541166_146547961_146548024_146548860_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093454	chr4	+	696	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16642	-4074	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	309.343175130792	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGTAAACAGTTTAACTT	1852	False	NA	NA	False	AATACA	-5	NA	146516837	146550675	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146516986_146518646_146518740_146533486_146533533_146547961_146548024_146548878_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093467	chr4	+	606	4	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16642	-4077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	371.977000483752	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1852	False	NA	NA	False	AATACA	-2	NA	146516837	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146517001_146547938_146548020_146548860_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093494	chr4	+	596	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	300.651376181783	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146516986_146533486_146533533_146547961_146548005_146548860_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093495	chr4	+	727	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	300.952222121718	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146516986_146518646_146518740_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093496	chr4	+	593	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	141.34421636558	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146516986_146533486_146533533_146547961_146548024_146548878_146548984_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093498	chr4	+	591	4	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	371.977000483752	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146516986_146547935_146548020_146548860_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093499	chr4	+	636	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	307.038576566529	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146516986_146533486_146533556_146547961_146548005_146548843_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093501	chr4	+	484	4	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	139.628077405656	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146516986_146533486_146533533_146547961_146548020_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093502	chr4	+	609	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	300.651376181783	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146516986_146533486_146533533_146547961_146548005_146548847_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093503	chr4	+	561	4	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	13.0979218029257	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146516986_146547961_146548020_146548860_146548984_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093504	chr4	+	1452	4	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	intron_retention	FALSE	canonical	3	169	junction_1	268.827495286889	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146516986_146533486_146533533_146547961_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093508	chr4	+	613	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	300.651376181783	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146516986_146533486_146533533_146547961_146548005_146548843_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093511	chr4	+	644	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	344.313084270697	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146516986_146518646_146518740_146547961_146548024_146548878_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093512	chr4	+	659	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	302.101572322952	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146516986_146533486_146533533_146541117_146541166_146547961_146548020_146548860_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093513	chr4	+	682	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	304.669919749226	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146516986_146533486_146533556_146541117_146541166_146547961_146548020_146548860_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093517	chr4	+	658	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	339.27302795831	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146516986_146518646_146518740_146547961_146548020_146548860_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093532	chr4	+	638	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	325.728798235587	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146516986_146533486_146533560_146547961_146548020_146548860_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093563	chr4	+	641	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	326.360517679452	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146517030_146533486_146533533_146547961_146548024_146548878_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093565	chr4	+	772	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	311.838804512844	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146517030_146533486_146533533_146541048_146541166_146547961_146548020_146548860_146548988_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093568	chr4	+	651	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	140.60827678341	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146517030_146533486_146533533_146547961_146548020_146548860_146548984_146550437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093592	chr4	+	236	1	NIC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	16957	-4077	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146550436	146550672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_146550400_146550700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093606	chr4	+	916	5	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-12	3413	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	172.99620660581	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATTCTGATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	146586471	146627265	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146586602_146603534_146603615_146616526_146616611_146619877_146620005_146626770
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093607	chr4	+	836	4	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-12	3413	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	190.482428469283	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATTCTGATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	146586471	146627265	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146586602_146616526_146616611_146619877_146620005_146626770
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093609	chr4	+	833	4	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-12	3413	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	189.429553015245	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATTCTGATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	146586471	146627265	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146586602_146616529_146616611_146619877_146620005_146626770
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093617	chr4	+	911	5	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-10	3413	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	175.50124643432	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATTCTGATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	146586473	146627265	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146586602_146603534_146603615_146616529_146616611_146619877_146620005_146626770
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093646	chr4	+	572	4	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	-26	-15286	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	91.507133905262	291	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGTCCTCCCACATGCCC	NA	False	NA	NA	False	NA	NA	NA	146695391	146726778	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146695757_146697966_146698060_146703608_146703692_146726747
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093662	chr4	+	712	6	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	19	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	145.190357806571	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146695436	146742069	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146695586_146697966_146698060_146728915_146728962_146739355_146739418_146740256_146740384_146741834
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093674	chr4	+	384	4	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	23	-38402	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	71.1633488687978	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGAGTTCTTCTCTGGTA	NA	False	NA	NA	False	NA	NA	NA	146695440	146703662	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146695507_146695585_146695757_146697966_146698060_146703608
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093680	chr4	+	773	7	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	23	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	127.839417499716	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146695440	146742069	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_146695586_146697966_146698060_146703608_146703692_146728915_146728962_146739355_146739418_146740274_146740384_146741834
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093715	chr4	+	2406	1	Intergenic	novelGene_318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146803605	146806011	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_146803600_146806000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093720	chr4	-	652	5	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	0	61504	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	109.527393833689	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTTCTACCATTAGT	NA	False	NA	NA	False	AATACA	-22	NA	146994047	146914648	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_146914767_146976977_146977116_146978205_146978333_146982168_146982273_146993882
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093722	chr4	-	651	4	NNC	ENSMUSG00000045699.5	novel	1296	4	NA	NA	0	61504	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_1	42.4996732013579	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTTCTACCATTAGT	NA	False	NA	NA	False	AATACA	-22	NA	146994047	146914648	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_146914904_146978205_146978333_146982168_146982273_146993882
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093736	chr4	-	442	1	NIC	ENSMUSG00000045699.5	novel	750	5	NA	NA	0	-16743	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTCTTAACTCCCCTGT	NA	False	NA	NA	False	AATAAA	-16	NA	146994047	146993605	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_146993600_146994000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093781	chr4	+	757	6	NNC	ENSMUSG00000067919.9	novel	3993	5	NA	NA	-46108	-3274	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	261.061984976748	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTCTTCTATCATTAGTC	NA	False	NA	NA	False	TATAAA	-21	NA	147060198	147141977	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_147060315_147107818_147107913_147115003_147115080_147136965_147137048_147140055_147140183_147141715
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093791	chr4	+	716	5	FSM	ENSMUSG00000067919.9	ENSMUST00000075775.6	3993	5	3	3274	3	-3274	multi-exon	FALSE	canonical	1	1	junction_2	279.904894562421	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTCTTCTATCATTAGTC	2286	False	NA	NA	False	TATAAA	-21	NA	147106309	147141977	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_147106458_147107818_147107913_147136962_147137048_147140055_147140183_147141715
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093797	chr4	-	438	1	FSM	ENSMUSG00000094017.2	ENSMUST00000118441.2	627	1	567	-378	567	378	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATCATGAAGTTTGTAA	NA	False	NA	NA	False	AATAAA	-19	NA	147170874	147170436	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_147170400_147170900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093824	chr4	+	239	1	NIC	ENSMUSG00000067916.10	novel	2813	7	NA	NA	27830	1790	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGTAAACAGTTTAACTT	NA	False	NA	NA	False	AATACA	-5	NA	147262780	147263019	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_147262800_147263000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093839	chr4	+	698	6	NNC	ENSMUSG00000087207.9	novel	585	4	NA	NA	-11	817	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	216.169007954424	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	4099	False	NA	NA	False	NA	NA	NA	147314729	147344612	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_147314893_147316807_147316901_147337753_147337859_147341252_147341380_147342850_147342967_147344518
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093844	chr4	+	3051	6	Fusion	ENSMUSG00000078498.6_ENSMUSG00000087207.9	novel	585	4	NA	NA	-3	0	multi-exon	FALSE	canonical	0	0	junction_3	204.124079912195	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	4107	False	NA	NA	False	NA	NA	NA	147314737	147418191	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr4_+_147314893_147316807_147316901_147337753_147337859_147409230_147409335_147413438_147413566_147415724
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093845	chr4	+	731	5	Fusion	ENSMUSG00000078498.6_ENSMUSG00000087207.9	novel	585	4	NA	NA	-3	-950	multi-exon	FALSE	canonical	3	16	junction_2	211.134287835965	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTGTTTTCTACCATT	4107	False	NA	NA	False	AATACA	-19	NA	147314737	147415976	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr4_+_147314893_147316807_147316901_147409230_147409335_147413438_147413566_147415724
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093867	chr4	-	552	1	Intergenic	novelGene_319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCCTTTATGCATC	NA	False	NA	NA	False	NA	NA	NA	147359956	147359404	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_-_147359400_147360000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093872	chr4	+	2740	3	NIC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-67	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	22.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	147390063	147418191	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_147390233_147409230_147409335_147415724
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093876	chr4	+	942	5	Fusion	ENSMUSG00000078498.6_ENSMUSG00000078497.10	novel	2800	4	NA	NA	-35	5664	multi-exon	FALSE	canonical	0	0	junction_1	239.243991565097	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGTATAATGGTATTCT	NA	False	NA	12	True	NA	NA	NA	147390095	147481125	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr4_+_147390233_147447267_147447362_147469673_147469759_147472778_147472906_147480626
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093938	chr4	+	728	4	NNC	ENSMUSG00000078496.10	novel	1488	4	NA	NA	-7	-672	at_least_one_novel_splicesite	FALSE	canonical	3	110	junction_1	92.8906166771793	142	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGTGACTGTGACAAATG	NA	False	NA	NA	False	NA	NA	NA	147576866	147597205	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_147577009_147592042_147592098_147595209_147595337_147596801
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093947	chr4	+	774	4	NNC	ENSMUSG00000078496.10	novel	1488	4	NA	NA	-6	-672	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	117.848301736691	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGTGACTGTGACAAATG	NA	False	NA	NA	False	NA	NA	NA	147576867	147597205	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_147577009_147591995_147592098_147595209_147595337_147596801
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093954	chr4	+	603	1	Intergenic	novelGene_320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGTTGTTTTCAACTT	NA	False	NA	15	True	NA	NA	NA	147599925	147600528	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_147599900_147600500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000093982	chr4	-	2622	5	NNC	ENSMUSG00000066000.13	novel	2594	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	233.592058940367	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTTGCTTGTTTTTA	NA	False	NA	-5	True	AATAAA	-18	NA	147726968	147696393	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_147698506_147699736_147699864_147702873_147703015_147725368_147725463_147726820
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094013	chr4	-	2678	5	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	381	1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	100.961316849574	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	9904	False	NA	NA	False	NA	NA	NA	147893864	147838429	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_147840693_147842158_147842286_147845677_147845783_147891546_147891641_147893775
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094018	chr4	-	589	5	NNC	ENSMUSG00000078495.11	novel	2405	4	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	107.217069536525	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	8362	False	NA	NA	False	NA	NA	NA	147860301	147838430	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_147838525_147840576_147840693_147842158_147842286_147845677_147845783_147860154
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094029	chr4	-	581	4	NIC	ENSMUSG00000078495.11	novel	2405	4	NA	NA	-11	-1788	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	106.377733676847	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTTCTACCATTAGT	8362	False	NA	NA	False	AATACA	-22	NA	147860301	147840443	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_147840693_147842158_147842286_147845677_147845736_147860154
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094031	chr4	-	451	3	NIC	ENSMUSG00000078495.11	novel	2405	4	NA	NA	-11	-1791	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	9	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTGTTTTCTACCATT	8362	False	NA	NA	False	AATACA	-19	NA	147860301	147840446	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_147840693_147845677_147845736_147860154
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094032	chr4	-	625	4	FSM	ENSMUSG00000078495.11	ENSMUST00000122309.2	2405	4	-11	1791	-11	-1791	multi-exon	FALSE	canonical	0	0	junction_3	106.377733676847	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTGTTTTCTACCATT	8362	False	NA	NA	False	AATACA	-19	NA	147860301	147840446	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_147840693_147842158_147842286_147845677_147845783_147860154
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094043	chr4	-	344	4	NNC	ENSMUSG00000093594.2	novel	2516	4	NA	NA	50	-11536	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	48.3068893177314	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTGTTGGTTTTTT	9521	False	NA	NA	False	NA	NA	NA	147894247	147878311	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_147878372_147880114_147880182_147891546_147891641_147894124
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094044	chr4	-	315	4	NNC	ENSMUSG00000093594.2	novel	2516	4	NA	NA	431	-11536	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	19.4821855949366	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTGTTGGTTTTTT	9902	False	NA	NA	False	NA	NA	NA	147893866	147878311	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_147878372_147880114_147880185_147891546_147891641_147893775
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094049	chr4	-	1046	2	Genic_Genomic	ENSMUSG00000080059.5	novel	426	1	NA	NA	-71839	58	multi-exon	FALSE	canonical	0	0	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAATTTTTGTTTTTAT	NA	False	NA	NA	False	AATAAA	-35	NA	147978498	147906175	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_147906777_147978053
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094080	chr4	-	298	1	NIC	ENSMUSG00000029022.19	novel	1813	10	NA	NA	1694	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147945545	147945247	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_147945200_147945500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094084	chr4	-	1440	1	Genic_Genomic	ENSMUSG00000029020.14	novel	NA	NA	NA	NA	12487	2	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCTCTGCCTGCAGTA	NA	False	NA	-2	True	AATAAA	-21	NA	147959493	147958053	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_147958100_147959500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094115	chr4	-	1111	5	NNC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	492	603	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	512.132307123853	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCTGTCTTGGTATGAT	NA	False	NA	-18	True	NA	NA	NA	148168741	148164370	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148168658
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094137	chr4	+	1209	8	FSM	ENSMUSG00000029003.12	ENSMUST00000105707.2	949	8	-257	-3	-238	0	multi-exon	FALSE	canonical	3	65	junction_6	213.795439137317	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATGAACATGTGTATCG	NA	False	NA	30	True	AATAAA	-38	NA	148224942	148230156	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229582_148229654_148229828
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094242	chr4	-	1138	8	NIC	ENSMUSG00000041459.16	novel	1304	8	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	3	35	junction_2	407.75718064474	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTCATCACCTGTCATG	NA	False	NA	1	True	AATAAA	-29	NA	148711227	148701169	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_148701302_148702022_148702093_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094243	chr4	-	1147	8	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	41	junction_2	406.055741624377	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTCATCACCTGTCATG	NA	False	NA	1	True	AATAAA	-29	NA	148711227	148701169	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_148701302_148702022_148702093_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094245	chr4	-	2176	7	NIC	ENSMUSG00000041459.16	novel	1304	8	NA	NA	0	3	intron_retention	FALSE	canonical	3	409	junction_1	257.510949066033	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTCATCACCTGTCATG	NA	False	NA	1	True	AATAAA	-29	NA	148711227	148701169	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_148701302_148702022_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094249	chr4	-	1235	8	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	54	junction_2	402.382192164898	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTCATCACCTGTCATG	NA	False	NA	1	True	AATAAA	-29	NA	148711227	148701169	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_148701302_148702022_148702163_148703103_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094279	chr4	-	1107	9	NNC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	443.673708230497	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAGTCAAATGGATTC	NA	False	NA	-12	True	AATAAA	-16	NA	148711222	148701182	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_148701302_148702022_148702163_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709627_148709718_148709834_148711137
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094292	chr4	-	1182	8	NIC	ENSMUSG00000041459.16	novel	6425	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_2	478.472228524695	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTTGTTTTGCAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	148711222	148701319	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_148701501_148702022_148702093_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094294	chr4	-	1196	8	NIC	ENSMUSG00000041459.16	novel	6425	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	477.117792327117	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTTGTTTTGCAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	148711227	148701319	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_148701501_148702022_148702093_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094302	chr4	-	1779	7	FSM	ENSMUSG00000041459.16	ENSMUST00000105699.8	1904	7	-12	137	0	0	multi-exon	FALSE	canonical	3	168	junction_1	346.808024064547	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTTGTTTTGCAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	148711227	148701319	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_148702163_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094305	chr4	-	1899	7	ISM	ENSMUSG00000041459.16	ENSMUST00000191450.7	1304	8	-12	138	0	0	5prime_fragment	FALSE	canonical	3	29	junction_1	398.417285434924	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTTGTTTTGCAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	148711227	148701319	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_148702283_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094313	chr4	-	1250	8	NIC	ENSMUSG00000041459.16	novel	1904	7	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	449.793240482417	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTCTTTGTTTTGCAG	NA	False	NA	NA	False	AATAAA	-15	NA	148711222	148701321	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_148701501_148702022_148702163_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094315	chr4	-	2218	7	NIC	ENSMUSG00000041459.16	novel	1904	7	NA	NA	0	-2	intron_retention	FALSE	canonical	3	40	junction_1	394.331255277703	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTCTTTGTTTTGCAG	NA	False	NA	NA	False	AATAAA	-15	NA	148711222	148701321	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_-_148701501_148702022_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094320	chr4	-	1711	7	FSM	ENSMUSG00000041459.16	ENSMUST00000105702.9	6425	7	231	4483	0	-2	multi-exon	FALSE	canonical	3	41	junction_1	393.959811825183	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTCTTTGTTTTGCAG	NA	False	NA	NA	False	AATAAA	-15	NA	148711222	148701321	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_148702093_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094339	chr4	-	1016	1	ISM	ENSMUSG00000028975.17	ENSMUST00000103217.11	2006	9	138326	0	138259	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGCTCTGACCTCGTC	NA	False	NA	-12	True	AATAAA	-20	NA	149046007	149044991	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_149045000_149046000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094341	chr4	-	1962	9	FSM	ENSMUSG00000028975.17	ENSMUST00000103217.11	2006	9	44	0	-4	0	multi-exon	FALSE	canonical	3	391	junction_6	18.1757909043871	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGCTCTGACCTCGTC	NA	False	NA	-12	True	AATAAA	-20	NA	149184289	149044991	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_149046252_149047898_149047991_149050678_149050777_149051980_149052084_149055006_149055093_149068493_149068623_149126177_149126263_149160476_149160525_149184228
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094372	chr4	-	692	1	Genic_Genomic	ENSMUSG00000028961.16	novel	NA	NA	NA	NA	9320	3	mono-exon	FALSE	NA	NA	NA	NA	NA	421	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGTTTCTTCTCCTGC	NA	False	NA	-5	True	AATAAA	-19	NA	149235136	149234444	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_149234400_149235100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094390	chr4	-	171	1	Intergenic	novelGene_321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTTTTTTTGTTTGTTGG	9505	False	NA	-11	True	NA	NA	NA	149417115	149416944	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_-_149416900_149417100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094397	chr4	+	614	1	FSM	ENSMUSG00000070572.8	ENSMUST00000117987.2	378	1	-42	-194	-42	194	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCTACTTCCTAACCTTA	1872	False	NA	NA	False	ATTAAA	-40	NA	149541743	149542357	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_149541700_149542400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094418	chr4	+	1574	8	NIC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	-22	0	intron_retention	FALSE	canonical	3	32	junction_1	58.2405287035881	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTGTCTATGAAAATTCA	NA	False	NA	27	True	NA	NA	NA	149569728	149581125	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_149570050_149570314_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094445	chr4	-	412	1	ISM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	29394	436	29394	-436	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCGTGCTGGGCTGTGTTC	NA	False	NA	-3	True	ATTAAA	-19	NA	149829340	149828928	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_149828900_149829300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094463	chr4	-	1475	7	FSM	ENSMUSG00000028972.12	ENSMUST00000105683.9	1460	7	-15	0	-15	0	multi-exon	FALSE	canonical	3	16	junction_1	3.44802681092953	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTACTATTCTTTT	NA	False	NA	2	True	AATAAA	-28	NA	150282942	150271471	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_150271966_150273577_150273702_150276931_150277090_150278164_150278235_150280512_150280606_150281774_150281924_150282555
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094482	chr4	+	1726	12	NNC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	5148.78065802601	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGCTGGGCATCTCA	NA	False	NA	-1	True	AATAAA	-16	NA	150321696	150333330	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332949
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094487	chr4	+	1727	12	NNC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	5207.93534065052	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGCTGGGCATCTCA	NA	False	NA	-1	True	AATAAA	-16	NA	150321696	150333330	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332523_150332577_150332942
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094489	chr4	+	1911	11	NIC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	8073	junction_10	2945.65562141945	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGCTGGGCATCTCA	NA	False	NA	-1	True	AATAAA	-16	NA	150321696	150333330	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332397_150332517_150332577_150332942
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094532	chr4	-	340	1	Genic_Genomic	ENSMUSG00000028964.15	novel	NA	NA	NA	NA	4364	1	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGTCTGGGGTCTTTT	NA	False	NA	0	True	AATAAA	-27	NA	150981928	150981588	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_150981600_150981900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094539	chr4	-	855	7	NNC	ENSMUSG00000028964.15	novel	908	7	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_1	2141.87587175354	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	NA	False	NA	-1	True	AATAAA	-26	NA	150994336	150981589	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_150981919_150985460_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994239
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094544	chr4	-	1183	7	FSM	ENSMUSG00000028964.15	ENSMUST00000105673.8	919	7	-158	-106	19	0	multi-exon	FALSE	canonical	3	11	junction_6	2143.40985477709	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	NA	False	NA	-1	True	AATAAA	-26	NA	150994266	150981589	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150993847
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094547	chr4	-	855	7	NNC	ENSMUSG00000028964.15	novel	908	7	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_2	2111.87410188728	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	NA	False	NA	-1	True	AATAAA	-26	NA	150994336	150981589	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_150981929_150985464_150985552_150988277_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994239
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094553	chr4	-	865	7	NNC	ENSMUSG00000028964.15	novel	908	7	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_4	2129.06622724611	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	NA	False	NA	-1	True	AATAAA	-26	NA	150994336	150981589	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991492_150991599_150992774_150992881_150994239
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094563	chr4	-	917	7	FSM	ENSMUSG00000028964.15	ENSMUST00000105675.8	882	7	-35	0	-35	0	multi-exon	FALSE	canonical	3	295	junction_6	2038.03331806807	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	5694	False	NA	-1	True	AATAAA	-26	NA	150998929	150981589	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150998776
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094640	chr4	+	1258	1	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	955	-182	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACTTCTGTCCATCTGT	7082	False	NA	18	True	NA	NA	NA	152065154	152066412	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_152065200_152066400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094642	chr4	-	415	1	Genic_Genomic	ENSMUSG00000039759.11	novel	NA	NA	NA	NA	5922	5	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTCACTCGGTTATGCT	NA	False	NA	2	True	AATAAA	-21	NA	152067505	152067090	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_-_152067100_152067500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094679	chr4	+	1837	2	ISM	ENSMUSG00000028948.17	ENSMUST00000131696.3	3616	11	18427	0	18427	0	3prime_fragment	FALSE	canonical	3	743	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGAATACAGCTCTTC	NA	False	NA	NA	False	NA	NA	NA	152142246	152144499	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_152142382_152142797
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094690	chr4	+	1416	9	FSM	ENSMUSG00000028937.15	ENSMUST00000075363.10	1457	9	45	-4	45	1	multi-exon	FALSE	canonical	3	360	junction_1	55.2466062306093	370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTAGGTGGTCATTTGTCT	NA	False	NA	21	True	AATAAA	-26	NA	152262635	152356313	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_152262798_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094758	chr4	+	489	4	NIC	ENSMUSG00000028936.16	novel	474	4	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	2450.77225924129	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152410314	152416937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_152410353_152411937_152412043_152414460_152414586_152416716
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094768	chr4	+	1016	4	NNC	ENSMUSG00000028936.16	novel	474	4	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	2383.03088990097	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152410315	152416937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_152410353_152411937_152412043_152413912_152414586_152416736
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094769	chr4	+	370	4	NNC	ENSMUSG00000028936.16	novel	474	4	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	2	148	junction_3	2384.37557630691	57	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152410315	152416937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_152410353_152411937_152412043_152414460_152414488_152416736
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094777	chr4	+	468	4	NNC	ENSMUSG00000028936.16	novel	474	4	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2637.97969834661	143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152410316	152416937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_152410350_152411937_152412047_152414460_152414586_152416736
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094790	chr4	+	446	4	NNC	ENSMUSG00000028936.16	novel	474	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2668.05913644274	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152410317	152416937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_152410350_152411937_152412043_152414460_152414569_152416736
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094794	chr4	+	445	4	NNC	ENSMUSG00000028936.16	novel	474	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2687.85035959139	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152410317	152416937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_152410350_152411955_152412043_152414460_152414586_152416736
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094796	chr4	+	617	5	NNC	ENSMUSG00000028936.16	novel	474	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2419.39470735967	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152410317	152416937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_152410350_152411937_152412043_152413716_152413871_152414460_152414586_152416736
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094797	chr4	+	457	4	NNC	ENSMUSG00000028936.16	novel	474	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2687.85035959139	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152410317	152416937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_152410350_152411943_152412043_152414460_152414586_152416736
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094808	chr4	+	455	4	NNC	ENSMUSG00000028936.16	novel	474	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2383.94803261779	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152410317	152416937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_152410353_152411937_152412047_152414475_152414586_152416736
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094809	chr4	+	361	3	NIC	ENSMUSG00000028936.16	novel	474	4	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2798	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152410317	152416937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_152410353_152414460_152414586_152416736
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094810	chr4	+	469	4	NNC	ENSMUSG00000028936.16	novel	474	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2451.68273278216	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152410317	152416937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_152410353_152411937_152412043_152414460_152414569_152416716
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094812	chr4	+	521	5	NNC	ENSMUSG00000028936.16	novel	474	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2501.17717285281	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152410317	152416937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_152410353_152411937_152412043_152413716_152413772_152414460_152414586_152416736
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094816	chr4	+	451	4	NNC	ENSMUSG00000028936.16	novel	474	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2383.94803261779	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152410317	152416937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_152410353_152411937_152412043_152414475_152414586_152416736
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094818	chr4	+	624	5	NNC	ENSMUSG00000028936.16	novel	474	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2501.42343226812	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152410317	152416937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_152410353_152411937_152412043_152413716_152413875_152414460_152414586_152416736
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094837	chr4	+	474	4	NNC	ENSMUSG00000028936.16	novel	474	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2637.97969834661	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152410317	152416937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_152410357_152411937_152412047_152414460_152414586_152416736
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094839	chr4	+	452	4	NNC	ENSMUSG00000028936.16	novel	474	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2687.85035959139	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152410317	152416937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_152410357_152411955_152412043_152414460_152414586_152416736
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094840	chr4	+	464	4	NNC	ENSMUSG00000028936.16	novel	474	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2635.1558250362	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152410317	152416937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_152410357_152411937_152412043_152414466_152414586_152416736
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094842	chr4	+	468	4	NNC	ENSMUSG00000028936.16	novel	474	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2637.97969834661	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152410317	152416937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_152410357_152411943_152412047_152414460_152414586_152416736
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094860	chr4	+	499	4	NNC	ENSMUSG00000028936.16	novel	474	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2383.94803261779	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152410318	152416937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_152410353_152411937_152412043_152414426_152414586_152416736
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094926	chr4	+	1570	3	ISM	ENSMUSG00000047613.11	ENSMUST00000147826.2	940	4	-11	-122	0	0	intron_retention	FALSE	canonical	3	119	junction_1	364	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGTTCACAAAAGTGT	NA	False	NA	NA	False	AATAAA	-29	NA	154041711	154046382	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_154041780_154044212_154044320_154044987
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094958	chr4	+	1603	12	FSM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	0	-5	0	5	multi-exon	FALSE	canonical	3	51	junction_4	6.78354840224641	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGTGGTTGTTTTCTTC	NA	False	NA	30	True	TATAAA	-35	NA	154226828	154241278	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_154226971_154229699_154229853_154230947_154231065_154233166_154233240_154236084_154236189_154236794_154236882_154237017_154237153_154237249_154237328_154238991_154239098_154239697_154239824_154240557_154240750_154240988
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094965	chr4	-	327	1	ISM	ENSMUSG00000029030.15	ENSMUST00000030896.15	1724	4	2855	0	2355	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTGCTCCTTTTTGAA	NA	False	NA	-3	True	AGTAAA	-16	NA	154242268	154241941	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_154241900_154242300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094982	chr4	-	884	7	FSM	ENSMUSG00000029059.10	ENSMUST00000030935.10	883	7	-1	0	-1	0	multi-exon	FALSE	canonical	3	64	junction_6	8.17856276425687	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCGTCCTTCCCACAGCA	NA	False	NA	-6	True	ATTAAA	-45	NA	154983568	154980855	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_154981055_154981496_154981616_154981805_154981882_154981962_154982027_154982584_154982637_154982932_154983138_154983399
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000094993	chr4	+	1598	6	FSM	ENSMUSG00000029047.14	ENSMUST00000103180.4	1688	6	19	71	19	-71	multi-exon	FALSE	canonical	3	86	junction_5	7.62627038597505	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGTCTTCATCTTGGCC	NA	False	NA	NA	False	NA	NA	NA	155151491	155156819	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_+_155151632_155152279_155152361_155153119_155153527_155154843_155155020_155155097_155155234_155156161
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095002	chr4	-	1612	7	FSM	ENSMUSG00000029048.4	ENSMUST00000030914.4	1596	7	-15	-1	-6	1	multi-exon	FALSE	canonical	3	1097	junction_6	206.502959354635	1401	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCGTCTACACGAGTCA	NA	False	NA	-12	True	ATTAAA	-23	NA	155170845	155158565	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095071	chr4	+	576	3	ISM	ENSMUSG00000029064.16	ENSMUST00000176637.2	2832	10	27670	1449	1899	165	3prime_fragment	FALSE	canonical	3	731	junction_2	1449.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGTGTGATTGTGAGA	995	False	NA	10	True	AATAAA	-20	NA	155639579	155642275	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_155639689_155641627_155641744_155641924
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095075	chr4	+	355	1	NIC	ENSMUSG00000029064.16	novel	3143	12	NA	NA	4240	165	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGTGTGATTGTGAGA	3336	False	NA	10	True	AATAAA	-20	NA	155641920	155642275	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_155641900_155642300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095150	chr4	+	318	1	ISM	ENSMUSG00000029038.10	ENSMUST00000030905.9	1472	5	28673	89	28338	-89	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTGTTGTTGGCCCTTT	4810	False	NA	28	True	AATAAA	-28	NA	155817929	155818247	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_155817900_155818200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095184	chr4	+	355	1	NIC	ENSMUSG00000029066.13	novel	764	4	NA	NA	4718	0	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTATTTCCTGGC	613	False	NA	22	True	AATAAA	-18	NA	155892933	155893288	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_155892900_155893300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095193	chr4	+	537	1	ISM	ENSMUSG00000029068.17	ENSMUST00000030944.11	2442	11	11332	186	10324	54	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTGGGCTGTCATTC	NA	False	NA	22	True	AATAAA	-27	NA	155908277	155908814	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_155908300_155908800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095248	chr4	+	183	1	NIC	ENSMUSG00000065990.13	novel	1159	4	NA	NA	1218	8	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGACCTAGAGTTTCTTT	NA	False	NA	35	True	AATAAA	-25	NA	155917343	155917526	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr4_+_155917300_155917500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095256	chr4	+	379	1	Genic_Genomic	ENSMUSG00000029070.10	novel	NA	NA	NA	NA	801	14	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGCTCTCCTTCTGTT	NA	False	NA	26	True	AATAAA	-27	NA	155928180	155928559	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr4_+_155928200_155928600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095261	chr4	-	2115	3	FSM	ENSMUSG00000029073.10	ENSMUST00000030950.8	2662	3	-9	556	-9	17	multi-exon	FALSE	canonical	3	76	junction_1	2.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGTATAGCATTCTGGGA	NA	False	NA	-26	True	AATAAA	-15	NA	155953906	155949735	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr4_-_155951343_155951569_155951795_155953623
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095286	chr4	-	1399	7	ISM	ENSMUSG00000051557.16	ENSMUST00000097737.5	1243	8	64	-5	9	5	intron_retention	FALSE	canonical	3	268	junction_3	44.2254326026201	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGTTTATTACTTTAGC	9144	False	NA	NA	False	AATAAA	-19	NA	155976174	155973313	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_-_155973626_155973890_155974054_155974125_155974181_155974955_155975127_155975209_155975360_155975508_155975697_155975814
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095328	chr4	+	1519	7	NNC	ENSMUSG00000029076.15	novel	1670	8	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	270.685190252851	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCTCTCCAGCATGTG	NA	False	NA	28	True	ATTAAA	-19	NA	156077620	156094667	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr4_+_156077792_156080645_156080976_156083859_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095347	chr4	+	1037	1	ISM	ENSMUSG00000059939.14	ENSMUST00000072554.13	2528	10	16247	0	12333	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	7384	False	NA	22	True	NA	NA	NA	156210685	156211722	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr4_+_156210700_156211700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095354	chr4	+	135	1	Intergenic	novelGene_322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTATTTGTTTATTTTAT	NA	False	NA	NA	False	ATTAAA	-29	NA	156299372	156299507	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr4_+_156299400_156299500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095372	chr5	+	704	2	ISM	ENSMUSG00000090701.2	ENSMUST00000166202.2	434	3	725	-366	725	366	3prime_fragment	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGACTCTTAAGACCAT	NA	False	NA	NA	False	AATAAA	-14	NA	3121467	3122888	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_3121649_3122365
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095380	chr5	+	534	2	Genic_Genomic	ENSMUSG00000062353.7	novel	438	1	NA	NA	-42	52240	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGTAAAATGTTTTACA	NA	False	NA	NA	False	AATAAA	-7	NA	3286388	3339108	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr5_+_3286907_3339092
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095381	chr5	+	547	2	Genic_Genomic	ENSMUSG00000062353.7	novel	438	1	NA	NA	-42	52056	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGTGATGTGAACAGTC	NA	False	NA	NA	False	AAAAAG	-7	NA	3286388	3338924	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr5_+_3286907_3338895
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095418	chr5	+	1004	1	Genic_Genomic	ENSMUSG00000058503.12	novel	NA	NA	NA	NA	2709	310	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTGCTCTTATCTCCC	NA	False	NA	8	True	AATAAA	-19	NA	3619544	3620548	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr5_+_3619500_3620500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095438	chr5	-	890	4	FSM	ENSMUSG00000007415.16	ENSMUST00000119783.2	1278	4	398	-10	398	10	multi-exon	FALSE	canonical	3	421	junction_2	22.2910046630673	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATGCATACAATTTCAG	NA	False	NA	2	True	NA	NA	NA	3697408	3693066	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_3693742_3694880_3694941_3696783_3696910_3697379
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095454	chr5	+	488	1	NIC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	13334	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTATTTAAACCATTTC	NA	False	NA	10	True	AATAAA	-23	NA	3890871	3891359	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_3890900_3891400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095464	chr5	-	1320	1	Genic_Genomic	ENSMUSG00000040429.7	novel	NA	NA	NA	NA	1998	2	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTGTATGTATTTTA	1283	False	NA	NA	False	AATAAA	-25	NA	3941898	3940578	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr5_-_3940600_3941900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095493	chr5	+	1320	1	Genic_Genomic	ENSMUSG00000053178.6	novel	NA	NA	NA	NA	3968	3	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTGTATGTATTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	4246334	4247654	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr5_+_4246300_4247700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095549	chr5	-	514	3	Intergenic	novelGene_323	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	1	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATCGTGAACTGGTATC	4776	False	NA	NA	False	ATTAAA	-22	NA	8062890	8046432	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_-_8046846_8053678_8053769_8062879
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095564	chr5	-	1151	1	ISM	ENSMUSG00000002297.17	ENSMUST00000002368.16	2401	12	24519	38	2144	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCTGAGAATAAAAATGAA	NA	False	NA	NA	False	AATAAA	-22	NA	8448161	8447010	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_8447000_8448200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095589	chr5	+	1370	6	ISM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	-39	52775	0	-111	5prime_fragment	FALSE	canonical	3	110	junction_4	19.0850727009357	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTTGTAACACAATTT	NA	False	NA	3	True	AATAAA	-21	NA	8848146	8863540	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557_8860616_8862654
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095612	chr5	-	765	1	NIC	ENSMUSG00000003623.5	novel	2996	18	NA	NA	15169	-178	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAGAGCTAGCAGCTTT	NA	False	NA	0	True	ATTAAA	-21	NA	9016975	9016210	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_9016200_9017000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095613	chr5	+	524	1	FSM	ENSMUSG00000078183.4	ENSMUST00000120584.2	195	1	-33	-296	-33	296	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGAGTGAAGAGAGCTGAAA	NA	False	NA	NA	False	NA	NA	NA	9021914	9022438	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_9021900_9022400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095616	chr5	-	387	2	Antisense	novelGene_ENSMUSG00000078183.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAATCTCTTTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	9022375	9021918	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr5_-_9022200_9022269
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095630	chr5	-	582	1	FSM	ENSMUSG00000062038.6	ENSMUST00000078246.6	319	1	-69	-194	-69	194	mono-exon	FALSE	NA	NA	NA	NA	NA	622	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGGCTCTCCCTTTCTCA	NA	False	NA	NA	False	ATTAAA	-28	NA	13171802	13171220	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_13171200_13171800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095642	chr5	-	1682	1	Genic_Genomic	ENSMUSG00000057614.7	novel	NA	NA	NA	NA	93543	4	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATTGACTGAATTTATTT	NA	False	NA	-3	True	AATAAA	-25	NA	18471810	18470128	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr5_-_18470100_18471800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095683	chr5	+	650	1	Genic_Genomic	ENSMUSG00000038525.17	novel	NA	NA	NA	NA	13537	5	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAATTTGTTTTATTTGTG	NA	False	NA	11	True	AGTAAA	-31	NA	21867047	21867697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr5_+_21867000_21867700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095717	chr5	-	580	3	ISM	ENSMUSG00000029014.15	ENSMUST00000147987.2	1011	6	8339	-2	-8148	2	3prime_fragment	FALSE	canonical	3	855	junction_1	65	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGAGCCATCTTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	21981813	21978517	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_21978857_21979931_21980074_21981714
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095728	chr5	+	1446	12	NNC	ENSMUSG00000028932.9	novel	1785	13	NA	NA	1462	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	524.930613281728	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCTTCCAGATCTCTG	NA	False	NA	21	True	AATAAA	-17	NA	21991742	22008785	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004942_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008271_22008363_22008461_22008544
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095736	chr5	+	1354	12	NNC	ENSMUSG00000028932.9	novel	1785	13	NA	NA	1464	0	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_10	474.994371432507	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCTTCCAGATCTCTG	NA	False	NA	21	True	AATAAA	-17	NA	21991744	22008785	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004933_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008172_22008363_22008461_22008544
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095792	chr5	-	660	1	FSM	ENSMUSG00000081855.5	ENSMUST00000121001.2	555	1	-77	-28	-77	28	mono-exon	FALSE	NA	NA	NA	NA	NA	499	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAGGTCAAAACAAAACA	NA	False	NA	NA	False	AATAAA	-28	NA	22818257	22817597	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_22817600_22818300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095807	chr5	-	457	1	ISM	ENSMUSG00000062604.12	ENSMUST00000088392.9	6491	15	109938	2876	35522	-688	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCTTGCTTATTACCC	1276	False	NA	-3	True	ATTAAA	-24	NA	23711594	23711137	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_23711100_23711600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095828	chr5	-	573	4	NNC	ENSMUSG00000028998.7	novel	1125	3	NA	NA	-91	5129	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1816.30877208573	40189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGCTCTCACTTTCCAC	NA	False	NA	NA	False	NA	NA	NA	24049250	24038812	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_24038847_24044618_24044827_24046707_24046757_24048968
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095855	chr5	-	413	4	NNC	ENSMUSG00000028998.7	novel	1125	3	NA	NA	-7644	-708	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1816.30877208573	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCCTTTCATACTTT	NA	False	NA	-29	True	AATAAA	-18	NA	24056803	24044649	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_24044827_24046707_24046757_24048968_24049143_24056790
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095858	chr5	-	395	3	NNC	ENSMUSG00000028998.7	novel	1125	3	NA	NA	9	-708	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1956.5	71	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCCTTTCATACTTT	NA	False	NA	-29	True	AATAAA	-18	NA	24049150	24044649	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_24044827_24046707_24046757_24048981
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095873	chr5	+	419	3	Intergenic	novelGene_324	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGTTTTGAAATCAGAGA	NA	False	NA	NA	False	NA	NA	NA	24044649	24056803	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_+_24044838_24048952_24049158_24056777
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095880	chr5	+	1391	4	FSM	ENSMUSG00000097180.6	ENSMUST00000181574.6	1375	4	-16	0	-16	0	multi-exon	FALSE	canonical	0	0	junction_3	11.0453610171873	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCGTCAGGTTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	24055578	24060036	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_24055620_24057118_24057154_24057715_24057759_24058764
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095886	chr5	+	1279	2	Genic_Genomic	ENSMUSG00000106118.2	novel	485	1	NA	NA	-75408	46	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAAGAAGGAAGGAAG	NA	False	NA	NA	False	AATAAA	-13	NA	24214833	24290772	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr5_+_24215515_24290174
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095903	chr5	+	1703	7	FSM	ENSMUSG00000048439.16	ENSMUST00000049887.13	2914	7	35	1176	-2	0	multi-exon	TRUE	canonical	3	52	junction_5	7.43116560320265	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCAAGGGACTCTTTTGT	5181	False	NA	NA	False	AATAAA	-20	NA	24369995	24387835	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_24370202_24372340_24372564_24374293_24374389_24380451_24380529_24382997_24383085_24386078_24386164_24386905
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095912	chr5	+	648	1	FSM	ENSMUSG00000081071.2	ENSMUST00000117132.2	216	1	199	-631	199	631	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTTAGGTAGGGATGA	NA	False	NA	NA	False	AATAAA	-44	NA	24462018	24462666	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_24462000_24462700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095924	chr5	+	200	1	ISM	ENSMUSG00000028978.13	ENSMUST00000030834.7	4132	26	19321	144	19321	3	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTGAGTTACAATGATT	1977	False	NA	NA	False	CATAAA	-27	NA	24589128	24589328	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_24589100_24589300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000095950	chr5	-	126	1	ISM	ENSMUSG00000028959.15	ENSMUST00000132109.8	828	5	1051	0	360	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24646162	24646036	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_24646000_24646200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096078	chr5	+	181	1	Intergenic	novelGene_325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTCTTTAAAAAAAATGG	NA	False	NA	NA	False	NA	NA	NA	25747674	25747855	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_+_25747700_25747900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096139	chr5	+	612	1	FSM	ENSMUSG00000078182.5	ENSMUST00000075518.5	357	1	-62	-193	-62	193	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAAGAAATTCTGTAATG	6633	False	NA	9	True	AATAAA	-33	NA	29743088	29743700	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_29743100_29743700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096143	chr5	-	447	2	Antisense	novelGene_ENSMUSG00000078182.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCCCAAGATTATCTTTA	NA	False	NA	NA	False	NA	NA	NA	29743695	29743096	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr5_-_29743278_29743429
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096147	chr5	-	1169	2	Genic_Genomic	ENSMUSG00000105032.2	novel	379	1	NA	NA	-13	181229	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCCCAAGATTATCTTTA	NA	False	NA	NA	False	NA	NA	NA	29924717	29743096	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr5_-_29743713_29924164
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096150	chr5	+	1153	2	Genic_Genomic	ENSMUSG00000078182.5	novel	357	1	NA	NA	-54	181210	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGCCTCAGTCAGCAGT	6641	False	NA	NA	False	NA	NA	NA	29743096	29924717	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr5_+_29743715_29924182
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096156	chr5	-	1117	2	Genic_Genomic	ENSMUSG00000105032.2	novel	379	1	NA	NA	-13	181229	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCCCAAGATTATCTTTA	NA	False	NA	NA	False	NA	NA	NA	29924717	29743096	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr5_-_29743728_29924231
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096174	chr5	+	1038	7	FSM	ENSMUSG00000029131.15	ENSMUST00000012734.10	1024	7	-14	0	-8	0	multi-exon	FALSE	canonical	3	30	junction_5	922.805580222015	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTGTATTTGGTCAGA	4587	False	NA	13	True	AATAAA	-21	NA	29940978	29962967	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29961231_29961337_29962545
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096261	chr5	-	710	2	Intergenic	novelGene_326	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGATCAATTAGCGG	NA	False	NA	NA	False	NA	NA	NA	30437398	30434240	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_-_30434875_30437322
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096322	chr5	-	587	3	FSM	ENSMUSG00000038803.8	ENSMUST00000132253.5	1144	3	-55	612	-55	21	multi-exon	FALSE	canonical	3	823	junction_2	132.5	4993	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGCTGTGGGGGAGTG	NA	False	NA	16	True	NA	NA	NA	31065187	31063840	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_31064111_31064742_31064881_31065008
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096361	chr5	-	2316	8	NIC	ENSMUSG00000045302.14	novel	6300	9	NA	NA	0	1	intron_retention	TRUE	canonical	3	234	junction_6	22.518926280272	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGCAGTCCTCTTGTCA	NA	False	NA	-7	True	AATAAA	-22	NA	31117624	31112385	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116757_31117314
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096378	chr5	+	857	7	FSM	ENSMUSG00000013622.16	ENSMUST00000200942.2	840	7	-12	-5	-1	0	multi-exon	FALSE	canonical	3	17	junction_2	101.141402666432	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCGTACCTGTGCGTG	920	False	NA	12	True	AATAAA	-25	NA	31205990	31211967	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_31206101_31206805_31206828_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211606
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096381	chr5	+	887	7	FSM	ENSMUSG00000013622.16	ENSMUST00000200748.4	548	7	-60	-279	3	0	multi-exon	FALSE	canonical	2	19	junction_6	104.663614605183	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCGTACCTGTGCGTG	935	False	NA	12	True	AATAAA	-25	NA	31206005	31211967	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_31206101_31206805_31206925_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211658
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096425	chr5	-	537	2	FSM	ENSMUSG00000106864.4	ENSMUST00000202300.2	759	2	325	-103	5	-14	multi-exon	FALSE	canonical	3	583	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGAGACCCCTTCTGG	NA	False	NA	NA	False	NA	NA	NA	31331840	31331161	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_31331434_31331575
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096433	chr5	-	1990	12	FSM	ENSMUSG00000029145.13	ENSMUST00000114603.8	1966	12	-22	-2	-22	1	multi-exon	FALSE	canonical	3	556	junction_3	55.8517814183514	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGACTCTGCTGCCTT	NA	False	NA	-8	True	AATAAA	-16	NA	31350380	31344909	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096471	chr5	+	249	1	Intergenic	novelGene_327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGCTTCCGCGGTCTTTG	NA	False	NA	NA	False	ATTAAA	-18	NA	31378085	31378334	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_+_31378100_31378300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096501	chr5	-	673	5	FSM	ENSMUSG00000038564.12	ENSMUST00000201426.4	742	5	70	-1	70	1	multi-exon	TRUE	canonical	3	79	junction_4	11.2110436623893	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTGCATTCTTTGCTC	NA	False	NA	-1	True	ATTAAA	-18	NA	31411927	31410622	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_31410769_31410896_31410989_31411158_31411313_31411562_31411662_31411745
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096506	chr5	-	359	2	ISM	ENSMUSG00000038552.15	ENSMUST00000041266.11	1375	8	2381	-3	223	3	3prime_fragment	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGGTTCCTGTATGGT	NA	False	NA	NA	False	AATAAA	-20	NA	31450834	31450226	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_31450509_31450757
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096517	chr5	-	298	2	Intergenic	novelGene_328	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTGGTCATGGTGTCT	719	False	NA	NA	False	NA	NA	NA	31646495	31641451	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_-_31641682_31646427
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096540	chr5	+	900	5	NNC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	-2109	558	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	430.321028419481	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTAAGCTTTCCTG	NA	False	NA	26	True	GATAAA	-15	NA	31662295	31668761	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_31662371_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096544	chr5	+	593	1	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	3769	563	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAAGCTTTCCTGTCATG	NA	False	NA	31	True	GATAAA	-20	NA	31668173	31668766	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_31668200_31668800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096556	chr5	+	711	5	ISM	ENSMUSG00000029141.17	ENSMUST00000202950.4	2499	14	16723	0	-48	0	3prime_fragment	FALSE	canonical	3	47	junction_2	30.1029483605842	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGTGATGATCATTCCC	1889	False	NA	11	True	AGTAAA	-21	NA	31701078	31711386	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_31701258_31703523_31703611_31705954_31706026_31708056_31708127_31711082
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096617	chr5	+	1632	12	FSM	ENSMUSG00000052139.19	ENSMUST00000201352.4	1888	12	256	0	-30	0	multi-exon	FALSE	canonical	3	639	junction_9	56.490326824983	417	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTCCTGAAGGCTTC	5808	False	NA	35	True	AATAAA	-31	NA	31855283	32242306	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428_31988504_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32214854_32215009_32241924
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096649	chr5	+	541	1	ISM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	33373	2767	6246	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTGAGTGATTATTCTGT	NA	False	NA	23	True	AGTAAA	-20	NA	32649559	32650100	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_32649600_32650100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096667	chr5	-	485	3	FSM	ENSMUSG00000023452.20	ENSMUST00000145759.2	865	3	0	380	0	-380	multi-exon	FALSE	canonical	3	799	junction_1	10	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGGCCCTGGACTCCCC	NA	False	NA	NA	False	TATAAA	-19	NA	32942970	32921956	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_32922293_32931739_32931811_32942892
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096670	chr5	-	838	5	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	3	4095	combination_of_known_splicesites	FALSE	canonical	3	86	junction_4	14.456832294801	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAAGAAGAGTCATGTGA	7056	False	NA	NA	False	NA	NA	NA	33011597	32988866	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33011436
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096672	chr5	-	1349	2	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	3	-7759	combination_of_known_splicesites	FALSE	canonical	3	86	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCCAGAGAAACCTTTGG	7056	False	NA	NA	False	NA	NA	NA	33011597	33000720	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_33001909_33011436
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096682	chr5	-	178	1	Intergenic	novelGene_329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAATGCACTATC	NA	False	NA	-1	True	NA	NA	NA	33191148	33190970	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_-_33191000_33191100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096706	chr5	+	902	1	ISM	ENSMUSG00000079562.8	ENSMUST00000114449.7	2193	9	36884	2	796	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGAGGTGTTTGT	NA	False	NA	18	True	AATAAA	-19	NA	33529736	33530638	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_33529700_33530600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096712	chr5	-	699	1	Intergenic	novelGene_330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTACTAGACTGGTGGCA	9968	False	NA	NA	False	AATACA	-18	NA	33642379	33641680	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_-_33641700_33642400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096722	chr5	-	433	1	ISM	ENSMUSG00000037339.18	ENSMUST00000065119.15	2009	6	28850	6	28127	3	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGCCTAGATTCTTTT	NA	False	NA	-9	True	ATTAAA	-17	NA	33758129	33757696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_33757700_33758100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096765	chr5	-	186	1	Intergenic	novelGene_331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTAAAAAAAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	33868744	33868558	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_-_33868600_33868700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096767	chr5	-	1484	9	ISM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	21897	2644	-7358	217	3prime_fragment	FALSE	canonical	3	324	junction_8	49.848363814673	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTTTTAATTTTCATCA	NA	False	NA	NA	False	AATAAA	-21	NA	33918264	33899660	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096770	chr5	+	1198	6	ISM	ENSMUSG00000057406.17	ENSMUST00000202525.4	2269	13	6464	-69	117	0	3prime_fragment	FALSE	canonical	3	260	junction_1	14.2407864951343	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCATGTGAAATGCTTTT	NA	False	NA	42	True	ATTAAA	-19	NA	34042958	34052839	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096783	chr5	+	496	4	FSM	ENSMUSG00000070858.13	ENSMUST00000114383.8	511	4	15	0	15	0	multi-exon	FALSE	canonical	3	25	junction_1	4.98887651569859	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGTCCTGTATTTTG	NA	False	NA	5	True	AATAAA	-13	NA	34140828	34142353	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_34140984_34141100_34141241_34141395_34141485_34142241
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096809	chr5	+	2949	7	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	824.87387924862	259	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATTTATTCAGTTATTC	NA	False	NA	30	True	AATAAA	-20	NA	34493733	34510785	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506100_34507255_34507416_34508133_34508183_34508574
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096850	chr5	-	1358	11	NIC	ENSMUSG00000001082.13	novel	1907	13	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	115.449599392982	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCCGTCTTACTATTCT	NA	False	NA	-2	True	AATAAA	-22	NA	34793868	34790987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793000_34793364_34793469_34793753
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096873	chr5	-	2697	18	FSM	ENSMUSG00000036693.13	ENSMUST00000041364.13	2702	18	15	-10	15	10	multi-exon	FALSE	canonical	3	557	junction_10	61.2066102226557	300	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTGTTGTAATGAAGG	NA	False	NA	5	True	AATAAA	-26	NA	34817477	34795869	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_34795996_34796234_34796391_34796528_34796648_34798213_34798362_34798666_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096880	chr5	-	1849	1	ISM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	12412	5	9160	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	677	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTCTGGGGAAAATGAC	NA	False	NA	-12	True	AATAAA	-16	NA	35250698	35248849	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_35248800_35250700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096900	chr5	+	223	1	ISM	ENSMUSG00000029098.18	ENSMUST00000068947.14	3976	19	30539	0	3480	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTTTCTCCCCTGTG	NA	False	NA	24	True	AATAAA	-15	NA	35770922	35771145	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_35770900_35771100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096907	chr5	+	241	1	Intergenic	novelGene_332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCCTAGCTAAGGATGTA	NA	False	NA	NA	False	NA	NA	NA	36028365	36028606	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_+_36028400_36028600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096925	chr5	+	652	1	NIC	ENSMUSG00000029198.4	novel	3528	4	NA	NA	6057	-2374	mono-exon	FALSE	NA	NA	NA	NA	NA	2083	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTCTACCTCTGAGTAC	NA	False	NA	24	True	AATAAA	-25	NA	36628398	36629050	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_36628400_36629000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096939	chr5	-	1037	1	NIC	ENSMUSG00000055302.6	novel	1648	2	NA	NA	827	-42	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCGGAGAGTTACTAAGAA	NA	False	NA	-1	True	AATAAA	-26	NA	36953289	36952252	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_36952300_36953300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096972	chr5	+	228	1	FSM	ENSMUSG00000063646.19	ENSMUST00000201223.2	950	1	763	-41	763	41	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGAGTGGAGTGAGAGCT	3243	False	NA	NA	False	TTTAAA	-3	NA	37249186	37249414	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_37249200_37249400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096981	chr5	+	1579	11	FSM	ENSMUSG00000029125.15	ENSMUST00000114126.9	3002	11	481	942	-10	0	multi-exon	FALSE	canonical	3	87	junction_9	9.96794863550169	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGTCAGTGAGTCTCCA	NA	False	NA	19	True	AATAAA	-19	NA	38196566	38294167	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_38196844_38249856_38249925_38262221_38262338_38263907_38263986_38264169_38264237_38273428_38273542_38278554_38278644_38284275_38284335_38285387_38285458_38292565_38292647_38293606
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000096995	chr5	+	1661	10	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	182	junction_2	844.746612604142	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATGATAACAAATTCTTG	NA	False	NA	23	True	AATAAA	-24	NA	38377813	38391650	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_38377980_38380477_38380576_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097011	chr5	+	1507	9	NNC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	515	junction_8	572.100078657572	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATGATAACAAATTCTTG	NA	False	NA	23	True	AATAAA	-24	NA	38377862	38391650	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_38377980_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391341
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097013	chr5	+	1415	9	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	739.268631402009	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTATCTATGATAACAA	NA	False	NA	16	True	AATAAA	-17	NA	38377863	38391643	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_38377980_38382061_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097032	chr5	+	1319	5	FSM	ENSMUSG00000067365.12	ENSMUST00000087511.10	1291	5	-13	-15	-13	15	multi-exon	FALSE	canonical	3	200	junction_4	19.5751756058534	1470	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGGCTTGTTTCTGTTT	NA	False	NA	NA	False	AATAAA	-40	NA	38417515	38426993	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_38417837_38419340_38419483_38422155_38422315_38424522_38424629_38426402
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097055	chr5	-	1565	1	Genic_Genomic	ENSMUSG00000046572.11	novel	NA	NA	NA	NA	14704	2	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTCTCTCATTTCGGACA	NA	False	NA	-1	True	AATAAA	-20	NA	38827389	38825824	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr5_-_38825800_38827400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097081	chr5	-	1558	6	NIC	ENSMUSG00000029128.13	novel	1635	7	NA	NA	-7	2	combination_of_known_splicesites	FALSE	canonical	3	38	junction_4	194.631549343882	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGGATTTTCATTTA	NA	False	NA	-2	True	AATAAA	-16	NA	41865507	41782316	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_41783206_41790515_41790594_41793148_41793253_41845063_41845194_41860780_41860878_41865247
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097094	chr5	-	773	5	ISM	ENSMUSG00000061755.11	ENSMUST00000202200.2	3387	9	11858	3967	-8392	-3967	internal_fragment	FALSE	canonical	3	41	junction_4	6.09815545882523	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAAAGATTCAAGG	NA	False	NA	NA	False	AAGAAA	-17	NA	41989777	41983824	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097128	chr5	+	804	1	FSM	ENSMUSG00000033036.10	ENSMUST00000122204.3	774	1	-3	-27	-3	27	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTCCAATGCCAGTGGA	NA	False	NA	NA	False	NA	NA	NA	44070482	44071286	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_44070500_44071300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097134	chr5	-	1413	7	FSM	ENSMUSG00000015806.13	ENSMUST00000015950.12	1380	7	-12	-21	-12	-4	multi-exon	FALSE	canonical	3	819	junction_4	94.8542741964395	4096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTGACTTACACATAGGG	NA	False	NA	2	True	AATAAA	-36	NA	45607590	45591373	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607348
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097140	chr5	-	1272	7	FSM	ENSMUSG00000015806.13	ENSMUST00000118097.8	1232	7	-38	-2	27	2	multi-exon	FALSE	canonical	0	0	junction_6	385.068680742655	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTCTTTTTCACTCAAG	NA	False	NA	-17	True	AATAAA	-17	NA	45607551	45591392	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607431
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097189	chr5	+	1624	13	NNC	ENSMUSG00000039682.13	novel	2267	13	NA	NA	-15	-532	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	725.209778079572	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGTTGTTCTTTTTTTT	NA	False	NA	17	True	ACTAAA	-2	NA	45650830	45669501	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668564_45669222
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097196	chr5	+	768	5	NNC	ENSMUSG00000015804.15	novel	4560	4	NA	NA	-14135	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	801.511501788964	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTGTATTCATCTTTA	4791	False	NA	32	True	AGTAAA	-21	NA	45663435	45682950	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_45663452_45677710_45677827_45679777_45679845_45680763_45680877_45682494
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097199	chr5	+	797	1	NIC	ENSMUSG00000039682.13	novel	2267	13	NA	NA	2669	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGTTCACTGTGATT	NA	False	NA	18	True	AATAAA	-17	NA	45669219	45670016	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_45669200_45670000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097201	chr5	+	628	1	Intergenic	novelGene_333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTTACTCTTAAGTT	338	False	NA	NA	False	AATAAA	-19	NA	45670576	45671204	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_+_45670600_45671200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097237	chr5	+	1173	1	FSM	ENSMUSG00000067321.6	ENSMUST00000121537.3	271	1	-89	-813	-89	813	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAAATCAACTGATTCTC	NA	False	NA	NA	False	AATAAA	-36	NA	46571596	46572769	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_46571600_46572800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097258	chr5	-	512	1	ISM	ENSMUSG00000029169.12	ENSMUST00000031061.12	3010	14	39794	6	7083	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAAGTCCTTCTGTATCT	NA	False	NA	-4	True	AATAAA	-21	NA	52308062	52307550	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_52307600_52308100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097301	chr5	+	945	1	ISM	ENSMUSG00000039191.13	ENSMUST00000037618.13	5459	11	66203	1	10679	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGATGTCTTCTGTGGG	4101	False	NA	15	True	AATAAA	-21	NA	53813758	53814703	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_53813800_53814700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097309	chr5	+	788	1	FSM	ENSMUSG00000051116.7	ENSMUST00000153583.3	499	1	-188	-101	-188	101	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCCAAGACAACCCTGAG	NA	False	NA	NA	False	AATAAA	-30	NA	57765722	57766510	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_57765700_57766500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097312	chr5	+	1116	1	ISM	ENSMUSG00000060512.8	ENSMUST00000081747.8	2008	4	86147	0	21034	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGGTATATGTGTCTCCC	NA	False	NA	NA	False	ATTAAA	-22	NA	64055852	64056968	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_64055900_64057000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097344	chr5	+	1047	5	NNC	ENSMUSG00000029178.15	novel	4016	3	NA	NA	-5441	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	351.299996441788	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGATGTGCTGTGGATG	NA	False	NA	16	True	AATAAA	-16	NA	64955289	64980450	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_64955374_64957556_64957711_64974077_64974174_64979216_64979701_64980221
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097361	chr5	-	342	2	NNC	ENSMUSG00000037913.13	novel	1012	8	NA	NA	33831	2777	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTCAGGGAAATCAATAGA	NA	False	NA	NA	False	ATTAAA	-16	NA	65215096	65208911	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_65209129_65214971
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097374	chr5	-	1102	1	ISM	ENSMUSG00000029191.17	ENSMUST00000203581.3	4689	25	72611	2	6158	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	8105	False	NA	-4	True	AATAAA	-19	NA	65420296	65419194	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_65419200_65420300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097383	chr5	+	2690	4	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	23569	0	23475	0	3prime_fragment	FALSE	canonical	3	98	junction_2	21.6024689946929	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTCTTAGACTTCG	NA	False	NA	24	True	AAAAAG	-6	NA	65529225	65541350	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_65529804_65533022_65533292_65536270_65537415_65540651
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097388	chr5	+	252	1	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	35442	0	35348	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTCTTAGACTTCG	1039	False	NA	24	True	AAAAAG	-6	NA	65541098	65541350	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_65541100_65541400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097416	chr5	-	785	7	NIC	ENSMUSG00000047215.15	novel	738	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	5084	junction_6	3396.55881820933	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548743	65545706	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_65545785_65545904_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548336_65548718
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097419	chr5	-	700	8	NNC	ENSMUSG00000047215.15	novel	738	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4694.81342134323	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548743	65545706	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_65545785_65545904_65546023_65546413_65546495_65546814_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097424	chr5	-	680	8	NNC	ENSMUSG00000047215.15	novel	738	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4621.57982971721	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548743	65545706	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_65545785_65545904_65546009_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097425	chr5	-	708	8	NNC	ENSMUSG00000047215.15	novel	738	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	4860.81001060355	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548743	65545706	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_65545785_65545904_65546023_65546413_65546495_65546820_65546954_65547730_65547841_65548081_65548198_65548288_65548336_65548718
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097426	chr5	-	1077	7	ISM	ENSMUSG00000047215.15	ENSMUST00000057885.13	738	8	44	0	-1	0	intron_retention	FALSE	canonical	3	8565	junction_1	2258.85099233118	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548743	65545706	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_65545785_65545904_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097429	chr5	-	1411	6	NIC	ENSMUSG00000047215.15	novel	738	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	5084	junction_5	2801.23648412625	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548743	65545706	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_65545785_65545904_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097433	chr5	-	698	8	NNC	ENSMUSG00000047215.15	novel	738	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4965.20739645344	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548743	65545706	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_65545785_65545904_65546023_65546411_65546495_65546818_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097434	chr5	-	729	8	NIC	ENSMUSG00000047215.15	novel	738	8	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	5043.69155379231	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548774	65545706	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_65545785_65545904_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548284_65548336_65548718
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097435	chr5	-	683	8	NNC	ENSMUSG00000047215.15	novel	738	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4939.84668439276	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548743	65545706	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_65545785_65545904_65546023_65546413_65546495_65546820_65546954_65547741_65547827_65548081_65548198_65548288_65548336_65548718
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097440	chr5	-	729	8	NNC	ENSMUSG00000047215.15	novel	738	8	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4694.81342134323	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548774	65545706	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_65545785_65545904_65546023_65546413_65546495_65546816_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097442	chr5	-	1020	7	NIC	ENSMUSG00000047215.15	novel	738	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	5084	junction_6	3160.42873761703	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548743	65545706	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_65545785_65545904_65546023_65546413_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097443	chr5	-	1085	7	NIC	ENSMUSG00000047215.15	novel	738	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	5084	junction_6	3067.5566643322	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548743	65545706	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_65545785_65545904_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097449	chr5	-	722	8	NNC	ENSMUSG00000047215.15	novel	738	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	4693.21135432089	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548743	65545706	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_65545785_65545904_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548364_65548718
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097453	chr5	-	698	8	NNC	ENSMUSG00000047215.15	novel	738	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4939.84668439276	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548743	65545706	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_65545785_65545904_65546023_65546413_65546495_65546820_65546954_65547726_65547827_65548081_65548198_65548288_65548336_65548718
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097465	chr5	-	668	8	NNC	ENSMUSG00000047215.15	novel	738	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	4694.53977227474	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548741	65545706	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_65545785_65545904_65546023_65546413_65546471_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097487	chr5	-	722	8	NNC	ENSMUSG00000047215.15	novel	738	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	5657.35061667562	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548743	65545706	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_65545811_65545904_65546023_65546413_65546495_65546818_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097498	chr5	-	818	7	NNC	ENSMUSG00000047215.15	novel	738	8	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_2	5067.46010234801	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548743	65545706	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_65546023_65546413_65546495_65546816_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097506	chr5	-	1205	6	NIC	ENSMUSG00000047215.15	novel	738	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	5084	junction_5	3235.21748264317	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548743	65545706	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097544	chr5	-	621	1	ISM	ENSMUSG00000037822.13	ENSMUST00000139122.8	4560	5	42976	2960	8087	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTGGTTTAGAATCCAT	NA	False	NA	NA	False	AATAAA	-18	NA	65607767	65607146	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_65607100_65607800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097555	chr5	-	1013	5	FSM	ENSMUSG00000037822.13	ENSMUST00000121661.8	1056	5	42	1	42	0	multi-exon	FALSE	canonical	2	20	junction_4	163.329421721869	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTGGTTTAGAATCCAT	NA	False	NA	NA	False	AATAAA	-18	NA	65650361	65607146	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650283
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097572	chr5	+	925	6	FSM	ENSMUSG00000029203.17	ENSMUST00000202679.4	4682	6	-20	3777	-5	7	multi-exon	FALSE	canonical	3	526	junction_1	338.408628731597	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTAATTTTTTTTCTT	NA	False	NA	27	True	AATAAA	-38	NA	65694613	65752495	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_65694890_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097643	chr5	+	1016	8	NNC	ENSMUSG00000029223.13	novel	1177	9	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	232.684598650146	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTTTTATTTTCTCTT	NA	False	NA	33	True	AATAAA	-22	NA	66833580	66844577	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_66833666_66834286_66834416_66837005_66837157_66839786_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097645	chr5	+	1526	8	NIC	ENSMUSG00000029223.13	novel	1177	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	449	junction_3	34.4211610282194	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTTTTATTTTCTCTT	NA	False	NA	33	True	AATAAA	-22	NA	66833580	66844577	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_66833666_66833778_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097649	chr5	+	1024	8	NNC	ENSMUSG00000029223.13	novel	1177	9	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	178.588113506231	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGGTTTTTATTTTCT	NA	False	NA	30	True	AATAAA	-19	NA	66833580	66844574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_66833675_66834286_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097652	chr5	+	1032	8	NNC	ENSMUSG00000029223.13	novel	1177	9	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	178.588113506231	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGGTTTTTATTTTCT	NA	False	NA	30	True	AATAAA	-19	NA	66833580	66844574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_66833683_66834286_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097655	chr5	+	1005	8	NNC	ENSMUSG00000029223.13	novel	1177	9	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	231.388179896723	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGGTTTTTATTTTCT	NA	False	NA	30	True	AATAAA	-19	NA	66833581	66844574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_66833666_66834286_66834416_66837005_66837157_66839784_66839871_66839960_66840000_66841031_66841099_66842115_66842175_66844184
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097665	chr5	+	354	1	ISM	ENSMUSG00000029223.13	ENSMUST00000031131.11	1177	9	10790	0	3197	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTTTTATTTTCTCTT	NA	False	NA	33	True	AATAAA	-22	NA	66844223	66844577	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_66844200_66844600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097799	chr5	+	1805	2	FSM	ENSMUSG00000106968.2	ENSMUST00000202711.2	848	2	0	-957	0	957	multi-exon	FALSE	canonical	3	15	junction_1	0	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAATCTGTTTCCTTCAT	NA	False	NA	NA	False	ACTAAA	-19	NA	74103723	74106676	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_74103968_74105115
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097834	chr5	+	386	1	Intergenic	novelGene_334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTTAAACTTGGTGACTG	NA	False	NA	NA	False	AATAAA	-35	NA	74686973	74687359	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_+_74687000_74687400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097853	chr5	-	592	1	ISM	ENSMUSG00000029229.9	ENSMUST00000075452.7	9699	6	38753	7442	38300	5750	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTAATTTATATACCT	NA	False	NA	-1	True	ATTAAA	-16	NA	75166682	75166090	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_75166100_75166700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097885	chr5	+	1084	4	ISM	ENSMUSG00000029234.14	ENSMUST00000031144.14	1897	6	20341	0	101	0	3prime_fragment	FALSE	canonical	3	1062	junction_1	85.1756355355737	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTCCTCGTGTGTTA	NA	False	NA	7	True	AATAAA	-15	NA	76352067	76357092	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_76352130_76352483_76352664_76355648_76355755_76356356
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097911	chr5	+	3365	19	FSM	ENSMUSG00000036435.14	ENSMUST00000087133.11	3371	19	-1	7	-1	0	multi-exon	FALSE	canonical	3	86	junction_10	33.5248203611431	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGATAATATTCTTAAG	NA	False	NA	10	True	AATAAA	-20	NA	76677156	76718134	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76705665_76705711_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097931	chr5	-	176	1	Intergenic	novelGene_335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTAAAAAAAAAGACG	NA	False	NA	NA	False	NA	NA	NA	77055401	77055225	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_-_77055200_77055400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097961	chr5	+	2044	9	NNC	ENSMUSG00000029247.18	novel	2482	9	NA	NA	-29	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1113.42927480824	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTCGCTGTGTGGTCTA	727	False	NA	17	True	ATTAAA	-20	NA	77099594	77115354	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_77099687_77104395_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000097991	chr5	-	640	4	FSM	ENSMUSG00000053030.12	ENSMUST00000065216.11	631	4	-8	-1	-8	1	multi-exon	FALSE	canonical	2	3	junction_1	1.63299316185545	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCGTCTTTTCTGTTGA	NA	False	NA	NA	False	AATAAA	-18	NA	77359326	77352952	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_77353273_77354775_77354886_77357579_77357642_77359178
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098004	chr5	+	1418	1	Genic_Genomic	ENSMUSG00000029249.16	novel	NA	NA	NA	NA	18821	2	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCTTTGTTTATTATTGG	NA	False	NA	16	True	AATAAA	-16	NA	77432863	77434281	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr5_+_77432900_77434300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098021	chr5	-	408	1	Intergenic	novelGene_336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATGTTTTTTAAAAAA	NA	False	NA	NA	False	ATTAAA	-22	NA	79786318	79785910	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_-_79785900_79786300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098033	chr5	+	1193	1	FSM	ENSMUSG00000079067.6	ENSMUST00000120716.2	279	1	-102	-812	-102	812	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAATTTATTACATTAAAG	NA	False	NA	NA	False	AATAAA	-36	NA	84271069	84272262	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_84271100_84272300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098047	chr5	+	840	1	ISM	ENSMUSG00000035851.15	ENSMUST00000120498.8	3269	17	31587	0	4057	0	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTATTTCCTTGTCT	NA	False	NA	13	True	AATAAA	-21	NA	86983678	86984518	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_86983700_86984500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098053	chr5	-	215	1	Intergenic	novelGene_337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	88310644	88310429	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_-_88310400_88310600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098063	chr5	-	2019	9	ISM	ENSMUSG00000044221.15	ENSMUST00000113234.8	2286	10	1922	-10	1448	0	3prime_fragment	FALSE	canonical	3	466	junction_8	37.9570069288926	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTATATTTTCTTTAC	NA	False	NA	2	True	AATAAA	-36	NA	88821603	88807306	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098079	chr5	-	2786	2	Antisense	novelGene_ENSMUSG00000060961.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAAATTGTATCCCCGT	NA	False	NA	NA	False	NA	NA	NA	89356998	89354144	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr5_-_89356493_89356560
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098104	chr5	-	98	1	ISM	ENSMUSG00000055204.16	ENSMUST00000014421.15	10458	34	137743	1571	3630	4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTACTTGTATATTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	90376693	90376595	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_90376600_90376700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098116	chr5	-	1933	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	-60	94	-60	3	multi-exon	FALSE	canonical	3	292	junction_5	17.5926120857592	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTTTACAGACTTTTT	1275	False	NA	NA	False	AATAAA	-24	NA	92110987	92096856	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098119	chr5	-	120	1	ISM	ENSMUSG00000029397.16	ENSMUST00000140670.8	1959	10	13152	381	4350	-284	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTTCTTTTCTCTCT	NA	False	NA	0	True	ATTAAA	-24	NA	92097263	92097143	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_92097100_92097300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098157	chr5	+	109	1	Intergenic	novelGene_338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTAATACAAGCTGGGTG	NA	False	NA	NA	False	NA	NA	NA	92259201	92259310	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_+_92259200_92259300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098167	chr5	+	195	1	Intergenic	novelGene_339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAAACTCACTACCCCT	NA	False	NA	NA	False	NA	NA	NA	92364076	92364271	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_+_92364100_92364300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098188	chr5	-	1024	8	FSM	ENSMUSG00000029415.5	ENSMUST00000202604.2	996	8	0	-28	0	28	multi-exon	FALSE	canonical	3	305	junction_2	27.4456791885799	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTGATAAGCAATTTTT	NA	False	NA	NA	False	AAAAAG	-1	NA	92457848	92449465	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098207	chr5	+	285	2	Intergenic	novelGene_340	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTTGTCTTGGTTCCATT	NA	False	NA	NA	False	NA	NA	NA	92659346	92660306	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_+_92659463_92660137
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098210	chr5	+	2008	1	ISM	ENSMUSG00000058013.12	ENSMUST00000074733.11	5028	10	79514	0	24448	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTGCCCGTTTGTG	NA	False	NA	12	True	AATATA	-17	NA	93320809	93322817	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_93320800_93322800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098238	chr5	+	1105	9	NNC	ENSMUSG00000029486.14	novel	3431	9	NA	NA	-3	-2293	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	239.064812080323	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGCTCCTCATGTTTTC	NA	False	NA	22	True	TATAAA	-16	NA	96357999	96412275	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_96358053_96361645_96361770_96371629_96371892_96374150_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098257	chr5	-	866	1	Genic_Genomic	ENSMUSG00000046000.6	novel	NA	NA	NA	NA	9317	1	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTGAGTTAATAACATT	NA	False	NA	-2	True	AATAAA	-20	NA	97530921	97530055	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr5_-_97530100_97530900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098259	chr5	-	1674	2	FSM	ENSMUSG00000046000.6	ENSMUST00000060265.6	3424	2	-1	1751	-1	-1751	multi-exon	FALSE	canonical	3	176	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGACTCTGCTCTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	97540239	97531807	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_97532729_97539486
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098282	chr5	-	533	3	ISM	ENSMUSG00000000568.16	ENSMUST00000164833.2	699	6	2142	-166	2142	0	3prime_fragment	FALSE	canonical	3	104	junction_1	21.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	100110467	100108860	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_100109193_100109956_100110064_100110373
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098291	chr5	-	333	1	NIC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	3416	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	100109193	100108860	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_100108900_100109200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098321	chr5	-	1765	8	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-15	0	intron_retention	FALSE	canonical	3	244	junction_1	292.518340607622	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186769	100182579	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_100182844_100183493_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098323	chr5	-	1292	8	NNC	ENSMUSG00000029328.16	novel	2752	8	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_5	382.973702939062	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186769	100182579	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185072_100185426_100185589_100185671_100185841_100186578
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098341	chr5	-	2701	6	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-16	0	intron_retention	FALSE	canonical	3	934	junction_2	94.4681957062799	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186770	100182579	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098351	chr5	+	1849	6	FSM	ENSMUSG00000029326.14	ENSMUST00000169390.8	1833	6	-1	-15	-1	15	multi-exon	FALSE	canonical	3	460	junction_1	20.2918702932973	333	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTGGATTGTGCCTCA	NA	False	NA	30	True	AATAAA	-30	NA	100187842	100216634	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_100188162_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098365	chr5	+	521	3	FSM	ENSMUSG00000100157.7	ENSMUST00000188902.2	508	3	-16	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_1	2	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCCCCATTCGACTGGGG	NA	False	NA	NA	False	AATAAA	-10	NA	100358550	100364597	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_100358887_100363664_100363725_100364472
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098371	chr5	-	1298	6	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-96	0	combination_of_known_splicesites	FALSE	canonical	3	466	junction_5	127.023462399669	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	NA	False	NA	-7	True	ATTAAA	-19	NA	100521439	100509507	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098385	chr5	-	660	5	NNC	ENSMUSG00000097772.8	novel	626	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	153.416100849943	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGAATGTTGTGTTTTA	NA	False	NA	-4	True	AATAAA	-34	NA	100577375	100568697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_100568832_100569826_100569901_100574594_100574664_100576905_100577098_100577184
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098387	chr5	-	754	6	NNC	ENSMUSG00000097772.8	novel	626	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	170.027527183101	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGAATGTTGTGTTTTA	NA	False	NA	-4	True	AATAAA	-34	NA	100577375	100568697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_100568832_100569826_100569901_100571146_100571291_100574594_100574664_100576955_100577098_100577184
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098413	chr5	+	1584	10	NNC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	429.878133750187	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGTACTTGGTTTTTAAT	5417	False	NA	20	True	AATAAA	-22	NA	100666318	100695646	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681111_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098449	chr5	+	535	6	NNC	ENSMUSG00000016833.15	novel	638	6	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_2	713.079630896859	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTGGAAATGTCTTTC	NA	False	NA	51	True	AATAAA	-33	NA	100946591	100952337	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_100946727_100947417_100947480_100949777_100949858_100950918_100950977_100951835_100951896_100952197
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098451	chr5	+	479	5	FSM	ENSMUSG00000016833.15	ENSMUST00000112898.8	460	5	-9	-10	-9	0	multi-exon	FALSE	canonical	3	63	junction_3	755.69086768334	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTGGAAATGTCTTTC	NA	False	NA	51	True	AATAAA	-33	NA	100946593	100952337	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_100946727_100947417_100947480_100949773_100949858_100951835_100951896_100952197
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098462	chr5	+	438	5	NIC	ENSMUSG00000016833.15	novel	638	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	81	junction_2	759.723140361013	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTGGAAATGTCTTTC	NA	False	NA	51	True	AATAAA	-33	NA	100946608	100952337	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_100946727_100947417_100947480_100950918_100950977_100951835_100951896_100952197
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098480	chr5	-	1694	10	FSM	ENSMUSG00000035234.19	ENSMUST00000200657.5	1668	10	-25	-1	0	1	multi-exon	FALSE	canonical	3	80	junction_1	36.8299395118217	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAATATCTTATTTTTA	NA	False	NA	-2	True	AATAAA	-20	NA	100968831	100953056	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_100953318_100953763_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098489	chr5	-	989	1	NIC	ENSMUSG00000035234.19	novel	1582	9	NA	NA	1146	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTAATATCTTATTTTT	NA	False	NA	-3	True	AATAAA	-19	NA	100954046	100953057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_100953100_100954000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098491	chr5	-	2139	9	FSM	ENSMUSG00000035234.19	ENSMUST00000055245.13	2139	9	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	23.2725025512943	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTAATATCTTATTTTT	NA	False	NA	-3	True	AATAAA	-19	NA	100968831	100953057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098519	chr5	+	844	3	NNC	ENSMUSG00000092354.8	novel	619	3	NA	NA	-59	0	intron_retention	FALSE	canonical	0	0	junction_1	72	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAATTTCCTTTGGCTCA	NA	False	NA	15	True	ATTAAA	-25	NA	101987961	101992198	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_101988034_101989616_101989940_101991749
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098531	chr5	+	832	1	ISM	ENSMUSG00000029313.19	ENSMUST00000054979.10	8323	20	100329	0	70132	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGCCTGTGGCTTTTAT	NA	False	NA	24	True	AATAAA	-21	NA	104002356	104003188	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_104002400_104003200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098534	chr5	-	1444	3	ISM	ENSMUSG00000029312.13	ENSMUST00000131843.2	2283	7	18685	-17	6764	-13	3prime_fragment	FALSE	canonical	3	128	junction_2	5	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTAGTCTTTTCATTGTT	6729	False	NA	NA	False	AATAAA	-33	NA	104015471	104009928	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_104011058_104012067_104012270_104015358
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098546	chr5	+	1520	8	NIC	ENSMUSG00000029310.14	novel	995	6	NA	NA	-2	-5	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	99.0728447730687	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGACTTGTGTTTCAAGTT	NA	False	NA	15	True	AATAAA	-18	NA	104194389	104213240	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_104194705_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098551	chr5	+	1350	8	FSM	ENSMUSG00000029310.14	ENSMUST00000031250.14	1488	8	128	10	29	-10	multi-exon	FALSE	canonical	3	305	junction_1	16.2468207250979	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGACTTGTGTTTC	NA	False	NA	10	True	AATAAA	-13	NA	104194862	104213235	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_104195013_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098574	chr5	+	1403	7	NNC	ENSMUSG00000029304.15	novel	1410	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2330.28713657542	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGGTGGTGTCAATTA	NA	False	NA	32	True	AATAAA	-19	NA	104582983	104588917	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_104583063_104584240_104584309_104584406_104584443_104585528_104585602_104586091_104586134_104587130_104587413_104588094
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098575	chr5	+	1513	7	NIC	ENSMUSG00000029304.15	novel	1410	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	2261.9683169016	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTGGTGGTGTCAATT	NA	False	NA	31	True	AATAAA	-18	NA	104582983	104588916	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_104583063_104584137_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098586	chr5	+	1375	6	NNC	ENSMUSG00000029304.15	novel	1410	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2525.174085088	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTGGTGGTGTCAATT	NA	False	NA	31	True	AATAAA	-18	NA	104582986	104588916	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_104583063_104584240_104584313_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098587	chr5	+	1400	7	NNC	ENSMUSG00000029304.15	novel	1410	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2310.82018267685	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTGGTGGTGTCAATT	NA	False	NA	31	True	AATAAA	-18	NA	104582986	104588916	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_104583063_104584240_104584309_104584413_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098589	chr5	+	1409	6	NNC	ENSMUSG00000029304.15	novel	1410	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2525.174085088	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTGGTGGTGTCAATT	NA	False	NA	31	True	AATAAA	-18	NA	104582986	104588916	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_104583063_104584240_104584313_104585486_104585602_104586091_104586134_104587130_104587413_104588094
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098595	chr5	+	1320	7	NNC	ENSMUSG00000029304.15	novel	1410	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	210	junction_6	2188.43708817249	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTGGTGGTGTCAATT	NA	False	NA	31	True	AATAAA	-18	NA	104582986	104588916	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_104583063_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588181
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098623	chr5	+	203	1	Intergenic	novelGene_341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTAAAGAATCTCTGAATT	NA	False	NA	NA	False	NA	NA	NA	104725131	104725334	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_+_104725100_104725300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098634	chr5	-	187	1	Intergenic	novelGene_342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACTCAAACAAATCAGTG	NA	False	NA	NA	False	NA	NA	NA	104773708	104773521	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_-_104773500_104773700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098645	chr5	-	1006	4	Genic_Genomic	ENSMUSG00000072774.11	novel	2904	5	NA	NA	36	10190	multi-exon	FALSE	canonical	0	0	junction_3	30.6847772609735	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGAAATTTTCTGCAAT	NA	False	NA	NA	False	AATAAA	-22	NA	105007900	104950844	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr5_-_104951336_104952168_104952309_104953146_104953426_105007804
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098662	chr5	+	771	1	Intergenic	novelGene_343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCGTGTTCGACTGTCT	8320	False	NA	NA	False	NA	NA	NA	105507941	105508712	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_+_105507900_105508700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098679	chr5	-	491	1	FSM	ENSMUSG00000067058.8	ENSMUST00000132586.2	393	1	-37	-61	-37	61	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACTTCTTTGCTTGATA	NA	False	NA	NA	False	AATAAA	-44	NA	105945616	105945125	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_105945100_105945600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098691	chr5	+	883	1	ISM	ENSMUSG00000046079.17	ENSMUST00000060531.16	3923	3	114364	0	-10178	0	mono-exon	FALSE	NA	NA	NA	NA	NA	508	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTCACAACCTTTCTTG	NA	False	NA	24	True	AATAAA	-35	NA	105962198	105963081	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_105962200_105963100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098712	chr5	-	1097	5	NIC	ENSMUSG00000043410.17	novel	5018	40	NA	NA	-2	-14837	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	3.96074487943871	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTAGTTAGCCGTAAGTC	NA	False	NA	NA	False	AATAAA	-16	NA	107074126	107064773	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_107065494_107066242_107066356_107070678_107070777_107072696_107072799_107074062
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098748	chr5	+	194	1	Intergenic	novelGene_344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTAAAAAAGGATT	NA	False	NA	NA	False	NA	NA	NA	108041897	108042091	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_+_108041900_108042100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098792	chr5	+	1226	12	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4934	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	569.930791796703	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGAAAAAATCTGTAGG	NA	False	NA	NA	False	AATACA	-42	NA	108208605	108251913	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_108208730_108228775_108228890_108229002_108229089_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098793	chr5	+	441	2	NNC	ENSMUSG00000029267.18	novel	3068	16	NA	NA	-4934	-107	at_least_one_novel_splicesite	FALSE	canonical	3	143	junction_1	0	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGCTCAGTAGAGTAAG	NA	False	NA	NA	False	AATAAA	-26	NA	108208605	108217344	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_108208730_108217027
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098853	chr5	+	1755	1	ISM	ENSMUSG00000029265.5	ENSMUST00000031190.5	3085	3	9875	0	1852	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTTATATTTAATGAT	NA	False	NA	NA	False	AATAAA	-21	NA	108426637	108428392	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_108426600_108428400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098857	chr5	+	207	1	Intergenic	novelGene_345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCCAGTAAGTGAATGTG	NA	False	NA	NA	False	ATTAAA	-7	NA	108479575	108479782	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_+_108479600_108479800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098870	chr5	-	459	2	ISM	ENSMUSG00000050856.17	ENSMUST00000118632.2	272	3	49	9	-2	-7	intron_retention	FALSE	canonical	2	13	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGGCTTCCTCTCTCT	5551	False	NA	-9	True	AATAAA	-15	NA	108582265	108581118	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_108581204_108581891
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098884	chr5	+	475	1	FSM	ENSMUSG00000060730.9	ENSMUST00000136334.2	354	1	-71	-50	-71	50	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGGATAACGCTTTTAT	NA	False	NA	NA	False	AATAAA	-26	NA	108664973	108665448	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_108665000_108665400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098908	chr5	+	1530	3	ISM	ENSMUSG00000008090.15	ENSMUST00000013633.12	2329	7	10597	-54	25	26	3prime_fragment	FALSE	canonical	3	107	junction_1	1	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTTTTTACCTGGG	NA	False	NA	30	True	AAGAAA	-17	NA	108852964	108854816	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_108853006_108853084_108853439_108853681
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098912	chr5	+	415	4	Intergenic	novelGene_346	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	6.94422221866655	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTCAGTGTGATACAAG	NA	False	NA	NA	False	NA	NA	NA	109614938	109625167	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_+_109615053_109624129_109624257_109624444_109624506_109625054
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098964	chr5	-	537	3	NNC	ENSMUSG00000033467.13	novel	1405	8	NA	NA	624	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	307.5	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGGCCAGCCATCATTAAT	NA	False	NA	-7	True	NA	NA	NA	109703715	109702574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_109702937_109703138_109703224_109703625
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098965	chr5	-	1254	7	NNC	ENSMUSG00000033467.13	novel	1405	8	NA	NA	1210	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	241.994260721659	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGGCCAGCCATCATTAAT	NA	False	NA	-7	True	NA	NA	NA	109705592	109702574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704281_109704429_109704866_109705034_109705383
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098969	chr5	-	659	4	NNC	ENSMUSG00000033467.13	novel	1405	8	NA	NA	623	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	264.499947490018	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGGCCAGCCATCATTAAT	NA	False	NA	-7	True	NA	NA	NA	109703716	109702574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_109702937_109703138_109703224_109703372_109703494_109703625
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000098980	chr5	-	812	4	ISM	ENSMUSG00000033467.13	ENSMUST00000200284.5	1405	8	2674	0	211	0	3prime_fragment	FALSE	canonical	3	140	junction_3	204.613999738261	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGGCCAGCCATCATTAAT	NA	False	NA	-7	True	NA	NA	NA	109704128	109702574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099005	chr5	-	459	3	ISM	ENSMUSG00000072763.3	ENSMUST00000092720.4	3341	4	186	3818	186	-3818	5prime_fragment	FALSE	canonical	3	55	junction_1	18.5	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGGTGTCTGATTTGTA	6317	False	NA	NA	False	NA	NA	NA	109838721	109826228	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_109826441_109826628_109826756_109838601
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099014	chr5	-	270	1	Intergenic	novelGene_347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGCCATATGCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	109883650	109883380	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_-_109883400_109883600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099020	chr5	-	660	4	NNC	ENSMUSG00000072762.10	novel	2001	4	NA	NA	-93155	1395	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_1	31.2018517968975	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTATGAATGTAATCAATG	NA	False	NA	NA	False	NA	NA	NA	109992907	109885301	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_109885666_109886815_109886877_109887064_109887192_109992799
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099031	chr5	-	410	3	NNC	ENSMUSG00000072762.10	novel	599	3	NA	NA	-109	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	61.5	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTGTGTTGATTAAAT	7837	False	NA	NA	False	NA	NA	NA	109899572	109886701	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_109886877_109887068_109887192_109899460
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099086	chr5	+	379	2	Intergenic	novelGene_348	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	29	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCTTAGCTCCATCTT	NA	False	NA	NA	False	NA	NA	NA	110223272	110223750	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_+_110223459_110223557
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099092	chr5	-	446	3	ISM	ENSMUSG00000109771.2	ENSMUST00000210052.2	3523	4	-18	4198	-18	-1060	5prime_fragment	FALSE	canonical	3	35	junction_2	13	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGGTGTCTGAATTGTG	NA	False	NA	NA	False	NA	NA	NA	110242304	110228199	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_110228411_110228603_110228731_110242196
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099145	chr5	-	1099	5	NNC	ENSMUSG00000029499.12	novel	1041	5	NA	NA	-40	-4	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	204.212511859582	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGGTTTCTCAGCAC	NA	False	NA	0	True	AATAAA	-24	NA	110434092	110422151	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_110422495_110425520_110425641_110429062_110429248_110431511_110431620_110433749
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099205	chr5	-	203	1	ISM	ENSMUSG00000029507.17	ENSMUST00000112426.8	1389	4	6098	0	6098	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGCCTATTTTCCTTT	NA	False	NA	1	True	ATTAAA	-22	NA	110921735	110921532	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_110921500_110921700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099229	chr5	-	854	1	Genic_Genomic	ENSMUSG00000029512.12	novel	NA	NA	NA	NA	1881	1	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTCAATTTCATCCT	NA	False	NA	-1	True	AATAAA	-16	NA	110933206	110932352	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr5_-_110932400_110933200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099235	chr5	-	808	6	NIC	ENSMUSG00000043510.13	novel	804	6	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	141.291754890369	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGCTAATTGGAAATAGA	NA	False	NA	0	True	AATAAA	-21	NA	110987645	110976938	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_110977078_110978801_110978850_110982520_110982666_110983840_110983936_110984172_110984270_110987361
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099261	chr5	+	2172	14	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	0	-5	combination_of_known_splicesites	TRUE	canonical	3	52	junction_11	68.5178679240099	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGTAGTTTGTTGTGGC	9182	False	NA	26	True	AAAACA	-2	NA	110987848	111022006	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111015873_111015960_111019892_111019974_111021345
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099283	chr5	+	2799	11	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	-32	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	374.982999614649	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGCTCCTGTGGTTG	NA	False	NA	18	True	AATAAA	-19	NA	111478596	111536227	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_111478700_111483360_111483392_111486148_111486299_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099301	chr5	+	1834	7	FSM	ENSMUSG00000029344.16	ENSMUST00000031287.12	1835	7	-2	3	-2	3	multi-exon	FALSE	canonical	3	176	junction_1	59.7847992571876	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTGAGTAGCTTTCTTCT	NA	False	NA	24	True	AATAAA	-34	NA	112424554	112463224	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_112424638_112451765_112451838_112455431_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099373	chr5	-	744	2	Antisense	novelGene_ENSMUSG00000063430.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTCTATGTGCAATCT	2011	False	NA	-3	True	NA	NA	NA	113722768	113711249	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr5_-_113711932_113722706
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099419	chr5	-	1185	9	NNC	ENSMUSG00000042078.15	novel	1682	15	NA	NA	-106	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.52126570633944	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTTGTGTCTTCACTGT	NA	False	NA	NA	False	NA	NA	NA	114181048	114166198	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_114166526_114168153_114168248_114169621_114169704_114170769_114170882_114173213_114173322_114176596_114176674_114179884_114179959_114180248_114180378_114180866
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099434	chr5	-	977	5	NNC	ENSMUSG00000044339.13	novel	899	4	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	223.527962456602	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGGGTGTGTGCA	7986	False	NA	-2	True	AATAAA	-22	NA	114266271	114261986	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_114262316_114263592_114263792_114263920_114263998_114265586_114265831_114266143
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099439	chr5	-	1050	4	NIC	ENSMUSG00000044339.13	novel	1073	4	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_3	238.844905511692	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGGGTGTGTGCA	7958	False	NA	-2	True	AATAAA	-22	NA	114266299	114261986	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_114262316_114263592_114263792_114265586_114265831_114266021
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099444	chr5	-	1101	4	NNC	ENSMUSG00000044339.13	novel	1073	4	NA	NA	-2566	0	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_3	211.98480029369	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGGGTGTGTGCA	5412	False	NA	-2	True	AATAAA	-22	NA	114268845	114261986	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_114262316_114263592_114263792_114265586_114265831_114268516
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099476	chr5	+	1295	9	NNC	ENSMUSG00000042010.17	novel	8482	52	NA	NA	-9707	8070	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	9.836157786453	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGTATAGGCCTGAATA	4780	False	NA	NA	False	NA	NA	NA	114328132	114336469	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_114328247_114328390_114328473_114329215_114329315_114329912_114330023_114330134_114330246_114333284_114333495_114333695_114333867_114334720_114334887_114336237
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099485	chr5	+	200	1	ISM	ENSMUSG00000042010.17	ENSMUST00000102582.8	8788	53	104027	0	2229	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGGCCTTGATTTATT	7789	False	NA	9	True	AATAAA	-19	NA	114388622	114388822	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_114388600_114388800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099507	chr5	+	1696	11	FSM	ENSMUSG00000041939.15	ENSMUST00000043760.15	1660	11	-34	-2	3	2	multi-exon	FALSE	canonical	3	102	junction_10	13.5410487038486	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGCCCTGTGGGAAGGC	NA	False	NA	NA	False	AATAAA	-22	NA	114582332	114598654	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_114582425_114583448_114583541_114584219_114584368_114588337_114588483_114588766_114588923_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099532	chr5	+	415	1	ISM	ENSMUSG00000041930.8	ENSMUST00000043650.8	2930	3	44788	2	44787	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTCAGCTGTGGG	NA	False	NA	10	True	AAGAAA	-15	NA	114750864	114751279	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_114750900_114751300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099549	chr5	-	195	1	Intergenic	novelGene_349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTAGTGGGTACAAAGTT	8111	False	NA	-22	True	NA	NA	NA	114845470	114845275	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_-_114845300_114845500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099559	chr5	+	1858	4	ISM	ENSMUSG00000041870.18	ENSMUST00000102578.11	3717	15	26100	1	1206	-1	3prime_fragment	FALSE	canonical	3	412	junction_1	25.9401019444583	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTGAGTTTCATTTCT	919	False	NA	28	True	AGTAAA	-18	NA	114938837	114943882	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_114938874_114939716_114939878_114941617_114941686_114942289
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099566	chr5	-	622	2	FSM	ENSMUSG00000072694.9	ENSMUST00000061251.6	579	2	-37	-6	-6	6	multi-exon	FALSE	canonical	3	102	junction_1	0	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCGTCCTTCTTGCTGG	713	False	NA	3	True	NA	NA	NA	114952043	114950847	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_114951267_114951840
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099568	chr5	-	564	2	NIC	ENSMUSG00000072694.9	novel	579	2	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	129	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTTTTGGCGTCCTTCT	9598	False	NA	-3	True	NA	NA	NA	114961524	114950853	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_114951267_114961373
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099572	chr5	-	1133	1	NIC	ENSMUSG00000072694.9	novel	1333	2	NA	NA	20	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTTTTGGCGTCCTTCT	770	False	NA	-3	True	NA	NA	NA	114951986	114950853	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_114950900_114952000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099597	chr5	+	363	3	ISM	ENSMUSG00000029559.16	ENSMUST00000131427.8	923	4	-25	759	-19	-130	5prime_fragment	FALSE	canonical	3	25	junction_2	124.5	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAGAAACTGGGAGCCCT	NA	False	NA	NA	False	NA	NA	NA	115080243	115084146	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_115080415_115083844_115083967_115084076
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099637	chr5	-	1896	11	NNC	ENSMUSG00000029545.14	novel	1870	10	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	171.377244697188	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCTGTGTCTGTCTT	9803	False	NA	-4	True	AATAAA	-18	NA	115257376	115248357	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115255623_115255788_115256835_115256891_115257283
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099656	chr5	-	677	1	ISM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	11114	3408	3981	1717	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTTTGCTTCAGCTTG	NA	False	NA	-1	True	AATAAA	-24	NA	115285124	115284447	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_115284400_115285100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099698	chr5	+	823	2	Intergenic	novelGene_350	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCTGGCAAACCTTTCT	651	False	NA	43	True	CATAAA	-20	NA	115341970	115343351	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_+_115342190_115342747
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099705	chr5	+	623	4	FSM	ENSMUSG00000060152.15	ENSMUST00000128830.5	575	4	-20	-28	-17	6	multi-exon	FALSE	canonical	3	53	junction_1	380.536755415587	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACTTGCCTTGAATGT	NA	False	NA	17	True	AATAAA	-19	NA	115376073	115379031	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_115376129_115378220_115378371_115378531_115378616_115378697
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099721	chr5	+	785	5	NIC	ENSMUSG00000060152.15	novel	1025	6	NA	NA	-6	6	combination_of_known_junctions	TRUE	canonical	3	23	junction_3	341.157588219872	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACTTGCCTTGAATGT	NA	False	NA	17	True	AATAAA	-19	NA	115376099	115379031	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_115376129_115376193_115376337_115378220_115378416_115378531_115378616_115378697
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099742	chr5	-	974	7	NNC	ENSMUSG00000041740.17	novel	3106	17	NA	NA	-1206	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	628.168966122969	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	False	NA	-20	True	AATAAA	-20	NA	115385340	115379828	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_115380114_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099746	chr5	-	944	7	NNC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	-1206	0	at_least_one_novel_splicesite	FALSE	canonical	3	291	junction_2	522.565041140548	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	False	NA	-20	True	AATAAA	-20	NA	115385340	115379828	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_115380121_115380451_115380574_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099747	chr5	-	979	7	NNC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	-1206	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	629.108474130036	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	False	NA	-20	True	AATAAA	-20	NA	115385340	115379828	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384940_115385041_115385227
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099765	chr5	+	233	1	ISM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	17072	2	13090	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCTCAGATGTCACTTTT	2766	False	NA	19	True	AATAAA	-17	NA	115434796	115435029	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_115434800_115435000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099783	chr5	-	415	1	FSM	ENSMUSG00000009013.6	ENSMUST00000202980.2	2242	1	1828	-1	600	1	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCTAGTTTGTTCAA	NA	False	NA	0	True	AATAAA	-17	NA	115436894	115436479	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_115436500_115436900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099786	chr5	-	646	3	NNC	ENSMUSG00000009013.6	novel	2030	3	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2102.5	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCTAGTTTGTTCA	NA	False	NA	-1	True	AATAAA	-16	NA	115438998	115436480	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_115436881_115438571_115438710_115438890
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099788	chr5	-	632	3	NNC	ENSMUSG00000009013.6	novel	2030	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	33	junction_2	1875.5	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCTAGTTTGTTCA	NA	False	NA	-1	True	AATAAA	-16	NA	115438993	115436480	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_115436893_115438571_115438689_115438890
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099790	chr5	-	734	3	NNC	ENSMUSG00000009013.6	novel	2030	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	1890	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCTAGTTTGTTCA	NA	False	NA	-1	True	AATAAA	-16	NA	115438993	115436480	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_115436893_115438571_115438710_115438809
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099824	chr5	+	1057	2	NNC	ENSMUSG00000029535.5	novel	1088	2	NA	NA	9	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	40	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGCTCCCAAAACCCT	2423	False	NA	28	True	AATAAA	-20	NA	115479292	115481612	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_115479471_115480733
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099834	chr5	-	288	1	NIC	ENSMUSG00000041697.10	novel	571	3	NA	NA	2985	0	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGACGGTACGATTTTAT	7906	False	NA	-26	True	AATAAA	-26	NA	115483988	115483700	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_115483700_115484000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099874	chr5	+	771	5	NNC	ENSMUSG00000029522.13	novel	557	4	NA	NA	-1167	-5	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	919.504588079907	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTGGTGATTGTT	NA	False	NA	25	True	AATAAA	-16	NA	115603153	115612776	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_115603279_115604230_115604380_115608840_115609001_115610051_115610180_115612567
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099919	chr5	+	1094	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-25	-212	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	8177.68914825916	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGGTCTGGATTTATTTA	NA	False	NA	25	True	AATAAA	-19	NA	115697570	115701574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_115697592_115697845_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099927	chr5	+	1089	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-25	-212	at_least_one_novel_splicesite	FALSE	canonical	1	97	junction_4	8259.3334073237	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGGTCTGGATTTATTTA	NA	False	NA	25	True	AATAAA	-19	NA	115697570	115701574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699305_115699403_115699578_115700484_115700626_115701341
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099936	chr5	+	1089	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-24	-212	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7950.63075065956	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGGTCTGGATTTATTTA	NA	False	NA	25	True	AATAAA	-19	NA	115697571	115701574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699305_115699391_115699567_115700484_115700626_115701341
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099938	chr5	+	1087	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-24	-212	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7997.5735834203	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGGTCTGGATTTATTTA	NA	False	NA	25	True	AATAAA	-19	NA	115697571	115701574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_115697599_115697845_115697948_115698799_115699051_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099940	chr5	+	1040	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-24	-212	at_least_one_novel_splicesite	FALSE	canonical	2	70	junction_2	5989.86292043111	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGGTCTGGATTTATTTA	NA	False	NA	25	True	AATAAA	-19	NA	115697571	115701574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_115697599_115697845_115697948_115698859_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099942	chr5	+	1108	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-24	-212	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	7941.6086251814	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGGTCTGGATTTATTTA	NA	False	NA	25	True	AATAAA	-19	NA	115697571	115701574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700634_115701341
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000099961	chr5	+	1120	7	NIC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-22	-212	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	6007.96673870065	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGGTCTGGATTTATTTA	NA	False	NA	25	True	AATAAA	-19	NA	115697573	115701574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_115697599_115697845_115697948_115698777_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100041	chr5	-	1266	2	NNC	ENSMUSG00000041548.5	novel	1816	3	NA	NA	5511	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTTGTGCTTCATTTAG	NA	False	NA	-3	True	AATAAA	-17	NA	116548440	116546552	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_116547550_116548171
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100053	chr5	+	512	4	FSM	ENSMUSG00000086219.8	ENSMUST00000126959.5	3360	4	-55	2903	-55	486	multi-exon	FALSE	canonical	3	257	junction_3	60.4281023659982	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTGTTGTTTTGTTATT	NA	False	NA	16	True	NA	NA	NA	116576723	116600643	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_116576898_116577427_116577496_116599782_116599863_116600453
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100063	chr5	+	551	5	NNC	ENSMUSG00000086219.8	novel	3360	4	NA	NA	-8	481	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	164.038676841774	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTGTTGTTGTTGTTTTG	NA	False	NA	11	True	NA	NA	NA	116576770	116600638	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_116576898_116577427_116577496_116587819_116587911_116599782_116599863_116600453
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100097	chr5	-	693	1	Genic_Genomic	ENSMUSG00000066900.12	novel	NA	NA	NA	NA	6444	5	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTGGTCTGTTTCTTCTC	NA	False	NA	1	True	GATAAA	-23	NA	117230432	117229739	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr5_-_117229700_117230400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100118	chr5	-	1220	4	NNC	ENSMUSG00000032959.13	novel	1240	4	NA	NA	-14	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1302.49069094562	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGGGTATTTCCTTCCT	NA	False	NA	-14	True	AATAAA	-18	NA	117425662	117420715	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_117421531_117423785_117423887_117424199_117424310_117425468
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100153	chr5	-	1795	11	FSM	ENSMUSG00000029363.15	ENSMUST00000086461.13	2796	11	-36	1037	-36	477	multi-exon	TRUE	canonical	3	1613	junction_7	125.046431376509	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCTGTCTACCTGCATG	NA	False	NA	-11	True	AATAAA	-25	NA	117527148	117517204	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100161	chr5	-	1751	11	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	5	472	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	552.384431351934	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGCTGGGCTGTCTACCT	NA	False	NA	-16	True	AATAAA	-20	NA	117527105	117517209	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_117517972_117518827_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100184	chr5	+	919	8	NIC	ENSMUSG00000029359.14	novel	785	8	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	22.6445470302252	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCATCTGTCCCTCACAT	4334	False	NA	17	True	AATAAA	-22	NA	118174061	118199943	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_118174195_118184379_118184450_118191648_118191730_118192894_118193035_118194441_118194504_118194601_118194710_118197506_118197555_118199666
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100188	chr5	+	899	8	FSM	ENSMUSG00000029359.14	ENSMUST00000151792.8	785	8	-17	-97	-17	0	multi-exon	FALSE	canonical	3	17	junction_5	31.162510181568	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGGCATCCCCATCTGTC	4351	False	NA	9	True	AATAAA	-14	NA	118174078	118199935	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_118174195_118184379_118184450_118191648_118191730_118192894_118193035_118194441_118194509_118194601_118194710_118197506_118197555_118199666
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100195	chr5	+	177	1	ISM	ENSMUSG00000029359.14	ENSMUST00000031304.14	1031	8	33959	0	20385	0	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCATCTGTCCCTCACAT	NA	False	NA	17	True	AATAAA	-22	NA	118199766	118199943	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_118199800_118199900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100197	chr5	-	632	1	ISM	ENSMUSG00000032867.9	ENSMUST00000049474.9	5000	11	88221	1647	88183	-1647	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGTGTGCTGCTCCTGTA	NA	False	NA	-28	True	ATTAAA	-17	NA	118205308	118204676	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_118204700_118205300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100212	chr5	+	374	1	ISM	ENSMUSG00000018076.13	ENSMUST00000100816.8	9296	31	204346	0	14678	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGAGTGGCTCTTTTCCC	NA	False	NA	30	True	AATAAA	-18	NA	118903129	118903503	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_118903100_118903500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100230	chr5	-	230	1	Intergenic	novelGene_351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTAAAATAACGTTGCC	NA	False	NA	NA	False	TTTAAA	-3	NA	119847860	119847630	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_-_119847600_119847900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100240	chr5	-	983	4	ISM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	16121	1965	16097	0	3prime_fragment	FALSE	canonical	3	256	junction_2	20.757863302587	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGAGGGCCTTGAGTCTT	8716	False	NA	-5	True	NA	NA	NA	120625569	120623311	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100319	chr5	-	1399	6	NNC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	17	-463	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	236.219050882862	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	121045567	121034781	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_121035088_121036360_121036536_121037135_121037369_121039932_121040118_121043658_121043948_121045356
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100325	chr5	-	1408	7	NNC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	17	-463	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	241.957296507738	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	121045567	121034781	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_121035088_121035242_121035270_121036381_121036536_121037132_121037369_121039932_121040118_121043658_121043948_121045356
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100354	chr5	+	974	7	NNC	ENSMUSG00000029614.14	novel	1270	7	NA	NA	20	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	6359.98192913226	169	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTTTTTGTGTGTTGT	NA	False	NA	7	True	ATTAAA	-21	NA	121342563	121347035	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_121342616_121343468_121343727_121343816_121343919_121344729_121344874_121345209_121345252_121346453_121346639_121346844
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100380	chr5	+	931	7	NNC	ENSMUSG00000029614.14	novel	1270	7	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6136.89765317587	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTCCTTTTTGTGT	NA	False	NA	2	True	ATTAAA	-16	NA	121342596	121347030	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_121342616_121343468_121343727_121343828_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100383	chr5	+	939	7	NNC	ENSMUSG00000029614.14	novel	1270	7	NA	NA	-12	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	6219.88043829354	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTTTTTGTGTGTTGT	NA	False	NA	7	True	ATTAAA	-21	NA	121342596	121347035	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_121342616_121343468_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346853
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100387	chr5	+	927	7	NNC	ENSMUSG00000029614.14	novel	1270	7	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	6219.88043829354	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTCCTTTTTGTGT	NA	False	NA	2	True	ATTAAA	-16	NA	121342596	121347030	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_121342616_121343468_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346860
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100400	chr5	+	1262	7	NNC	ENSMUSG00000029614.14	novel	1270	7	NA	NA	-1	6	at_least_one_novel_splicesite	FALSE	canonical	3	211	junction_1	6037.22683071918	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTTTTTGTGTGTTGT	NA	False	NA	7	True	ATTAAA	-21	NA	121342607	121347035	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_121342941_121343468_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100414	chr5	+	1016	5	NIC	ENSMUSG00000029614.14	novel	1270	7	NA	NA	-5	1	intron_retention	FALSE	canonical	3	14010	junction_1	1202.18080482929	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTCCTTTTTGTGT	NA	False	NA	2	True	ATTAAA	-16	NA	121343466	121347030	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100421	chr5	+	182	1	Intergenic	novelGene_352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAATTAGACCTTA	NA	False	NA	2	True	NA	NA	NA	121351486	121351668	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_+_121351500_121351700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100426	chr5	+	201	1	Intergenic	novelGene_353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACATGGTGGCTCACAACC	8083	False	NA	NA	False	NA	NA	NA	121514993	121515194	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_+_121515000_121515200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100505	chr5	+	542	1	ISM	ENSMUSG00000038582.16	ENSMUST00000053426.15	4644	6	39375	0	27968	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCACTCCTTTGGTTTG	NA	False	NA	24	True	AATAAA	-37	NA	122461802	122462344	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_122461800_122462300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100533	chr5	+	485	1	ISM	ENSMUSG00000029462.19	ENSMUST00000155671.8	2716	4	8436	1695	5178	3	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTGAAAACCTGTGTT	137	False	NA	20	True	AATAAA	-20	NA	122500867	122501352	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_122500900_122501400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100610	chr5	+	360	1	ISM	ENSMUSG00000029470.16	ENSMUST00000031429.14	2702	12	21143	692	1023	2	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTCTGTGCTGCCTCC	NA	False	NA	17	True	ATTAAA	-22	NA	122866749	122867109	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_122866700_122867100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100615	chr5	-	289	1	ISM	ENSMUSG00000029471.14	ENSMUST00000196742.2	1084	5	22761	0	-2722	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAGTTAGCAGTGTCTT	7082	False	NA	0	True	AATAAA	-21	NA	122894627	122894338	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_122894300_122894600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100627	chr5	-	2424	17	FSM	ENSMUSG00000029472.14	ENSMUST00000197074.5	2413	17	-7	-4	0	2	multi-exon	TRUE	canonical	3	46	junction_8	522.501461570922	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTTTTTTTTTATTTTT	NA	False	NA	-15	True	AATAAA	-24	NA	122959350	122925781	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938672_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100654	chr5	+	1716	5	NIC	ENSMUSG00000029474.8	novel	4440	6	NA	NA	50	-2346	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	85.4005269304587	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAGTTTAATATTGTT	673	False	NA	9	True	AATAAA	-16	NA	122988269	123007008	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_122988362_123002049_123002458_123004864_123004970_123005182_123005385_123006099
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100670	chr5	+	923	6	NNC	ENSMUSG00000029440.16	novel	2597	6	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	75.4994039711573	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACGTCTTGTGCAAATTA	NA	False	NA	17	True	ATTAAA	-18	NA	123366314	123386590	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_123366508_123372656_123372760_123377604_123377806_123379894_123379997_123384256_123384346_123386355
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100674	chr5	+	382	1	ISM	ENSMUSG00000029440.16	ENSMUST00000100729.9	2597	6	20391	1169	6746	435	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCTGTCAGTATATTC	NA	False	NA	23	True	NA	NA	NA	123386643	123387025	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_123386600_123387000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100685	chr5	-	1571	6	FSM	ENSMUSG00000029433.17	ENSMUST00000111587.10	1576	6	7	-2	7	2	multi-exon	FALSE	canonical	3	603	junction_3	53.1902246658162	493	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTTTCAGAATTGTTTC	8929	False	NA	-10	True	AATAAA	-27	NA	123662232	123649765	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100710	chr5	-	1756	1	ISM	ENSMUSG00000029434.13	ENSMUST00000031388.13	4235	13	42181	443	28162	-443	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTCTCAATTTACAC	2241	False	NA	-11	True	ATTAAA	-20	NA	123668920	123667164	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_123667200_123668900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100720	chr5	+	389	1	Intergenic	novelGene_354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTTAATTTATTGTTC	NA	False	NA	NA	False	AATACA	-44	NA	123863204	123863593	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_+_123863200_123863600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100724	chr5	-	2181	10	FSM	ENSMUSG00000029422.16	ENSMUST00000182309.8	1595	10	-2	-584	-2	3	multi-exon	FALSE	canonical	3	403	junction_7	46.2523939987681	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTATGCTATTTGCTTA	4319	False	NA	NA	False	AATAAA	-18	NA	123887479	123866485	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123887351
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100747	chr5	-	1386	1	NIC	ENSMUSG00000029422.16	novel	2344	12	NA	NA	0	-4427	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAACCCTGTCTCGAAA	4354	False	NA	NA	False	NA	NA	NA	123887444	123886058	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_123886100_123887400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100771	chr5	+	1025	8	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	-23	463	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_4	551.935037585299	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTCTCTTTTTT	9049	False	NA	15	True	AATAAA	-24	NA	124045308	124065659	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_124045430_124046162_124046278_124053253_124053274_124055262_124055344_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100805	chr5	+	350	1	NIC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	19759	464	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTCTCTTTTTTA	NA	False	NA	16	True	AATAAA	-25	NA	124065310	124065660	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_124065300_124065700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100812	chr5	-	2485	4	FSM	ENSMUSG00000066278.7	ENSMUST00000040967.9	2522	4	37	0	25	0	multi-exon	FALSE	canonical	3	122	junction_3	15.8394724940223	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGTGTTTCTCTCAT	2273	False	NA	-1	True	AATAAA	-20	NA	124170296	124142703	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_124144802_124145671_124145755_124148750_124148923_124170164
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100865	chr5	+	582	1	ISM	ENSMUSG00000047635.7	ENSMUST00000077376.3	1677	3	13165	0	13165	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCGAGGAAGCTGTGG	279	False	NA	17	True	NA	NA	NA	124479325	124479907	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_124479300_124479900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100889	chr5	-	1408	4	FSM	ENSMUSG00000029401.9	ENSMUST00000031347.8	1391	4	-12	-5	-12	5	multi-exon	FALSE	canonical	3	23	junction_1	3.55902608401044	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCATGTGTATCCAACTGAA	NA	False	NA	53	True	AATAAA	-29	NA	124616441	124601322	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_124601875_124606649_124606755_124607760_124607913_124615842
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100946	chr5	+	765	1	ISM	ENSMUSG00000029387.11	ENSMUST00000031333.4	2672	13	16941	835	1816	258	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCTTAGAGTGTTTTTC	9015	False	NA	23	True	AATAAA	-24	NA	124734143	124734908	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_124734100_124734900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100971	chr5	-	2392	12	FSM	ENSMUSG00000037936.16	ENSMUST00000111390.8	2367	12	-23	-2	0	0	multi-exon	TRUE	canonical	3	487	junction_1	58.8981471316135	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTTCTGTGACTGTT	NA	False	NA	-1	True	AATAAA	-21	NA	125418158	125354150	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_125354930_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100983	chr5	-	527	3	NNC	ENSMUSG00000008348.10	novel	2618	2	NA	NA	260	6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	458	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCATTTGTGTTGTTGGT	NA	False	NA	-6	True	AATAAA	-20	NA	125466818	125463034	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_125463215_125465039_125465329_125466760
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000100985	chr5	-	417	3	NNC	ENSMUSG00000008348.10	novel	2618	2	NA	NA	260	6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	456.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCATTTGTGTTGTTGGT	NA	False	NA	-6	True	AATAAA	-20	NA	125466818	125463034	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_125463363_125465297_125465329_125466760
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101017	chr5	+	795	7	NNC	ENSMUSG00000049971.18	novel	1713	11	NA	NA	-56	-22130	at_least_one_novel_splicesite	TRUE	canonical	3	16	junction_6	12.7986544431653	70	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTTGGTCATGGTGTCT	8645	False	NA	NA	False	NA	NA	NA	127709269	127744805	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127744557
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101023	chr5	-	421	2	Antisense	novelGene_ENSMUSG00000049971.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	0	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTCTCTTGTTCCTTT	NA	False	NA	0	True	AATAAA	-22	NA	127760519	127733931	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr5_-_127734238_127760404
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101026	chr5	-	464	2	Antisense	novelGene_ENSMUSG00000049971.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTCTCTTGTTCCTTT	NA	False	NA	0	True	AATAAA	-22	NA	127760486	127733931	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr5_-_127734314_127760404
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101063	chr5	+	727	1	FSM	ENSMUSG00000081683.6	ENSMUST00000117102.4	3250	1	2530	-7	2530	7	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGCATTGGTGAGG	NA	False	NA	21	True	AATAAA	-24	NA	128680437	128681164	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_128680400_128681200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101078	chr5	+	1113	7	NNC	ENSMUSG00000029430.14	novel	2377	7	NA	NA	-25	-1152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5562.02402208245	219	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCATCCCTTGCTTATTA	450	False	NA	NA	False	AATAAA	-28	NA	129097240	129100235	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_129097343_129097591_129097639_129097747_129097829_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101084	chr5	+	1081	7	NNC	ENSMUSG00000029430.14	novel	2377	7	NA	NA	-2	-1157	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	5555.13680449606	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGAATCATCCCTTGCT	473	False	NA	NA	False	AATAAA	-23	NA	129097263	129100230	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_129097343_129097591_129097639_129097747_129097825_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101117	chr5	+	1114	7	NNC	ENSMUSG00000029430.14	novel	2423	6	NA	NA	0	-1157	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5691.21391317841	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGAATCATCCCTTGCT	545	False	NA	NA	False	AATAAA	-23	NA	129097335	129100230	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_129097440_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101125	chr5	+	1067	6	NNC	ENSMUSG00000029430.14	novel	2423	6	NA	NA	195	-1157	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6090.43272682656	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGAATCATCCCTTGCT	740	False	NA	NA	False	AATAAA	-23	NA	129097530	129100230	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_129097639_129097747_129097829_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101135	chr5	+	914	1	ISM	ENSMUSG00000029430.14	ENSMUST00000031383.14	2377	7	3341	0	3138	0	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGAGTCATCTCTAGT	3683	False	NA	21	True	AATATA	-23	NA	129100473	129101387	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_129100500_129101400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101138	chr5	-	455	2	Intergenic	novelGene_355	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGGGTATCATTATTAT	6691	False	NA	NA	False	ATTAAA	-14	NA	129109924	129109378	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_-_129109746_129109836
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101143	chr5	-	525	2	Genic_Genomic	ENSMUSG00000060419.9	novel	441	1	NA	NA	-54	81	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTTTAAAAGGCCCTAC	NA	False	NA	NA	False	AATAAA	-45	NA	129205635	129205059	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr5_-_129205432_129205482
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101166	chr5	+	573	2	Intergenic	novelGene_356	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGGGGTTCCCTAGGTG	NA	False	NA	NA	False	AATAAA	-23	NA	129298525	129305652	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_+_129298647_129305200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101170	chr5	+	840	2	ISM	ENSMUSG00000029439.15	ENSMUST00000200500.2	437	3	-210	-83	-1	83	intron_retention	FALSE	canonical	3	66	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCTTAGTGATCTTTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	129578302	129581528	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_129578661_129581046
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101253	chr5	-	1220	6	ISM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	8145	-9	-91	9	3prime_fragment	FALSE	canonical	3	674	junction_1	180.962537559573	4352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAAGTGAATTTTGGGC	NA	False	NA	7	True	ATTAAA	-31	NA	129856368	129842612	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_129842963_129843482_129843632_129846302_129846449_129847669_129847805_129848539_129848697_129856085
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101257	chr5	-	1539	8	FSM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	196	-2	-1	2	multi-exon	FALSE	canonical	3	66	junction_7	460.03695503731	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTAGTTTTAAGTGAAT	8953	False	NA	0	True	ATTAAA	-24	NA	129864317	129842619	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_129842963_129843482_129843632_129846302_129846449_129847669_129847805_129848539_129848697_129856085_129856313_129856425_129856509_129864018
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101259	chr5	-	1165	6	NNC	ENSMUSG00000029446.15	novel	1733	8	NA	NA	-39	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	448.90649360418	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTAGTTTTAAGTGAAT	NA	False	NA	0	True	ATTAAA	-24	NA	129856316	129842619	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_129842963_129843478_129843632_129846302_129846449_129847669_129847805_129848539_129848697_129856085
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101260	chr5	-	343	1	Genic_Genomic	ENSMUSG00000029446.15	novel	NA	NA	NA	NA	5257	2	mono-exon	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTAGTTTTAAGTGAAT	NA	False	NA	0	True	ATTAAA	-24	NA	129842962	129842619	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr5_-_129842600_129843000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101322	chr5	+	1631	9	NNC	ENSMUSG00000025538.16	novel	1656	10	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	158.002373399895	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTATTTATTTATTAT	NA	False	NA	16	True	AATAAA	-16	NA	129875845	129892273	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_129875932_129878741_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101328	chr5	+	800	1	NIC	ENSMUSG00000025538.16	novel	2264	9	NA	NA	10124	2	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTTATTATAT	NA	False	NA	18	True	AATAAA	-18	NA	129891475	129892275	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_129891500_129892300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101351	chr5	-	715	4	NNC	ENSMUSG00000070493.4	novel	915	4	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2718.45556643228	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGTAGCGTCCTTAT	2245	False	NA	-6	True	AATAAA	-15	NA	129916130	129909999	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_129910222_129911269_129911421_129912774_129913025_129916038
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101355	chr5	-	713	4	NNC	ENSMUSG00000070493.4	novel	915	4	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2786.08737998091	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGTAGCGTCCTTAT	2245	False	NA	-6	True	AATAAA	-15	NA	129916130	129909999	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_129910238_129911269_129911403_129912774_129913025_129916038
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101358	chr5	-	714	4	NNC	ENSMUSG00000070493.4	novel	915	4	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2718.45556643228	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGTAGCGTCCTTAT	2245	False	NA	-6	True	AATAAA	-15	NA	129916130	129909999	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_129910238_129911286_129911421_129912774_129913025_129916038
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101364	chr5	-	713	4	NNC	ENSMUSG00000070493.4	novel	915	4	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2948.04895934017	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGTAGCGTCCTTAT	2245	False	NA	-6	True	AATAAA	-15	NA	129916130	129909999	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_129910238_129911269_129911421_129912774_129913007_129916038
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101372	chr5	-	728	4	NNC	ENSMUSG00000070493.4	novel	915	4	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2786.08737998091	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGTAGCGTCCTTAT	2245	False	NA	-6	True	AATAAA	-15	NA	129916130	129909999	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_129910238_129911269_129911418_129912774_129913025_129916038
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101435	chr5	+	1415	5	FSM	ENSMUSG00000025532.14	ENSMUST00000202163.4	931	5	-17	-467	-5	13	multi-exon	FALSE	canonical	3	60	junction_3	138.212472302611	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGTATGTTTGTGTGT	NA	False	NA	18	True	AAAACA	-14	NA	130058125	130089643	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_130058249_130063752_130063790_130066660_130066760_130077766_130077825_130088545
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101451	chr5	+	513	1	FSM	ENSMUSG00000080893.2	ENSMUST00000118998.2	402	1	-2	-109	-2	109	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATCTAATTGAGAGGCA	3489	False	NA	NA	False	ATTAAA	-31	NA	130217233	130217746	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_130217200_130217700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101455	chr5	+	664	1	ISM	ENSMUSG00000025340.15	ENSMUST00000119797.8	2690	9	41881	0	513	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTTTGTTTTGTTTCTG	361	False	NA	21	True	AATAAA	-43	NA	130242519	130243183	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_130242500_130243200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101475	chr5	-	1388	5	NIC	ENSMUSG00000025337.11	novel	1548	5	NA	NA	-25	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	356.535411985962	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCTTGCATTTCTAG	NA	False	NA	-1	True	AATAAA	-16	NA	130284271	130274572	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282851_130284050
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101478	chr5	-	1409	6	NIC	ENSMUSG00000025337.11	novel	1548	5	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	2	14	junction_5	322.62758716514	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCTTGCATTTCTAG	NA	False	NA	-1	True	AATAAA	-16	NA	130284373	130274572	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282910_130284050_130284152_130284291
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101510	chr5	-	1628	8	ISM	ENSMUSG00000061979.9	ENSMUST00000076228.3	2321	11	8539	16	25	-16	3prime_fragment	FALSE	canonical	3	313	junction_2	27.7613738412028	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGGTCTTGTAAAAGTTT	NA	False	NA	-12	True	AATAAA	-26	NA	134197074	134176908	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101513	chr5	+	204	1	Intergenic	novelGene_357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTCGTCTACATAGCAAG	4611	False	NA	NA	False	NA	NA	NA	134188633	134188837	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_+_134188600_134188800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101524	chr5	+	334	1	FSM	ENSMUSG00000072576.6	ENSMUST00000084281.3	210	1	-25	-99	-25	99	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATATTCAGGGTGGGAG	NA	False	NA	NA	False	AATAAA	-35	NA	134492068	134492402	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_134492100_134492400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101545	chr5	+	366	1	ISM	ENSMUSG00000023104.10	ENSMUST00000023867.8	4995	11	15273	3477	3844	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCTATGCTTAATTGC	NA	False	NA	19	True	GATAAA	-15	NA	134626816	134627182	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_134626800_134627200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101580	chr5	+	1165	1	ISM	ENSMUSG00000040557.15	ENSMUST00000047196.14	2808	6	8240	865	146	49	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTGATCTGATTTATGG	2608	False	NA	NA	False	AATAAA	-18	NA	134969461	134970626	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_134969500_134970600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101586	chr5	-	1848	1	FSM	ENSMUSG00000047501.4	ENSMUST00000051401.4	1816	1	-35	3	-35	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	550	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGGCTGTTCTCTATCT	NA	False	NA	-12	True	AATAAA	-22	NA	134975823	134973975	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_134974000_134975800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101593	chr5	+	1409	1	FSM	ENSMUSG00000070473.5	ENSMUST00000094245.4	1259	1	-146	-4	-146	4	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGAGCTTCCTTATCCTG	4895	False	NA	42	True	AATAAA	-22	NA	135014921	135016330	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_135014900_135016300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101638	chr5	-	518	3	FSM	ENSMUSG00000085042.9	ENSMUST00000222613.2	363	3	-91	-64	-91	0	multi-exon	FALSE	canonical	3	24	junction_1	6.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGGACCCTCTCCGTGC	NA	False	NA	-8	True	ATTAAA	-21	NA	135041733	135040975	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_135041187_135041283_135041405_135041547
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101682	chr5	+	1018	1	NIC	ENSMUSG00000029681.13	novel	1758	6	NA	NA	1253	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTGACAGCTTCTTTCT	NA	False	NA	26	True	ATTAAA	-21	NA	135209688	135210706	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_135209700_135210700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101705	chr5	-	410	1	NIC	ENSMUSG00000040013.12	novel	1297	8	NA	NA	57762	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCAGTACAATTCATTG	NA	False	NA	-1	True	AATAAA	-20	NA	135320967	135320557	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_135320600_135321000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101732	chr5	-	462	1	ISM	ENSMUSG00000039959.14	ENSMUST00000060311.12	7835	31	138120	3	23099	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCTGGTGATAAAGGGC	NA	False	NA	-1	True	AATAAA	-21	NA	135435849	135435387	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_135435400_135435800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101736	chr5	-	515	1	ISM	ENSMUSG00000039959.14	ENSMUST00000060311.12	7835	31	135427	2643	20406	-2639	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCACTATCATTTTTAAAAA	NA	False	NA	-3	True	AATAAA	-20	NA	135438542	135438027	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_135438000_135438500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101763	chr5	+	1482	9	FSM	ENSMUSG00000019179.11	ENSMUST00000019323.11	1456	9	-16	-10	-16	3	multi-exon	FALSE	canonical	3	4657	junction_8	277.596267085853	2923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCCTTTTCCATCAGCT	437	False	NA	48	True	AGTAAA	-35	NA	135807317	135819255	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101776	chr5	+	1285	9	NNC	ENSMUSG00000019179.11	novel	1456	9	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1659.57155615538	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTGTAGATTTCCTTT	628	False	NA	38	True	AGTAAA	-25	NA	135807508	135819245	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816477_135818054_135818155_135818479_135818632_135818930
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101809	chr5	-	288	1	ISM	ENSMUSG00000029699.14	ENSMUST00000111153.8	2745	11	14021	12	1761	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTAACTGAGGTCATT	NA	False	NA	-7	True	AATAAA	-16	NA	135989364	135989076	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_135989100_135989400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101812	chr5	-	1154	3	FSM	ENSMUSG00000029699.14	ENSMUST00000054895.4	1191	3	38	-1	-18	0	multi-exon	FALSE	canonical	0	0	junction_2	7	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTAACTGAGGTCATT	NA	False	NA	-7	True	AATAAA	-16	NA	135991143	135989076	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_135990063_135990742_135990821_135991053
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101817	chr5	+	1315	8	FSM	ENSMUSG00000004948.13	ENSMUST00000005073.13	1323	8	8	0	8	0	multi-exon	TRUE	canonical	3	12	junction_4	3.97953950776689	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGAGTGTGGTTTAATG	NA	False	NA	NA	False	AATAAA	-13	NA	136008960	136017478	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_136009297_136011492_136011612_136013015_136013120_136013201_136013386_136014398_136014517_136016108_136016201_136016325_136016463_136017253
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101827	chr5	+	202	1	Intergenic	novelGene_358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTTGAGCTGGGCATG	NA	False	NA	NA	False	NA	NA	NA	136079510	136079712	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_+_136079500_136079700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101851	chr5	-	2181	15	FSM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	-1	293	-1	2	multi-exon	FALSE	canonical	3	342	junction_8	23.380722043284	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGTGGGAAATGAGTGTA	6683	False	NA	-9	True	ATTAAA	-21	NA	136164929	136151918	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158_136162300_136162787_136162905_136163352_136163588_136164725
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101925	chr5	+	980	2	Intergenic	novelGene_359	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAACAACTTTGACACTG	2029	False	NA	NA	False	AATAAA	-22	NA	136969964	136974081	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_+_136970322_136973458
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101959	chr5	-	815	6	FSM	ENSMUSG00000059518.15	ENSMUST00000111091.8	1070	6	382	-127	-21	0	multi-exon	FALSE	canonical	1	1	junction_5	147.746268988425	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCTCATTCTGGG	NA	False	NA	2	True	AATAAA	-18	NA	137015704	137011047	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_137011272_137011371_137011542_137011721_137011802_137013732_137013904_137014979_137015110_137015664
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101966	chr5	-	802	4	FSM	ENSMUSG00000059518.15	ENSMUST00000111090.9	698	4	-2	-102	-2	0	multi-exon	FALSE	canonical	0	0	junction_3	144.270579121316	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCTCATTCTGGG	NA	False	NA	2	True	AATAAA	-18	NA	137016399	137011047	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_137011542_137011721_137011802_137013732_137013904_137016342
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101982	chr5	-	1309	5	NNC	ENSMUSG00000004849.15	novel	1353	5	NA	NA	41	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	320.796956812249	72	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCCTTGGCTTTGTTGG	NA	False	NA	1	True	AATAAA	-25	NA	137074948	137063846	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_137064643_137066271_137066410_137070622_137070732_137071917_137072097_137074861
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000101993	chr5	-	448	1	ISM	ENSMUSG00000037411.11	ENSMUST00000041388.11	3011	9	10308	0	10303	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTGCTTGTTGCCTTCT	NA	False	NA	NA	False	AATATA	-19	NA	137090805	137090357	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_137090400_137090800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102070	chr5	+	2432	18	FSM	ENSMUSG00000093445.8	ENSMUST00000031734.16	3078	18	54	592	-3	263	multi-exon	FALSE	canonical	3	234	junction_8	20.6479805391719	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTGTGCGTGTGTG	2238	False	NA	28	True	TATAAA	-16	NA	137627436	137638764	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102110	chr5	+	756	4	NNC	ENSMUSG00000029725.11	novel	476	2	NA	NA	-3237	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	194.303885704841	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCGAACTGTTCTTGGGA	NA	False	NA	5	True	AATAAA	-18	NA	137773873	137778372	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_137773992_137777563_137777808_137777887_137778025_137778115
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102124	chr5	+	1055	3	ISM	ENSMUSG00000029725.11	ENSMUST00000031739.6	956	4	-8	0	-8	0	intron_retention	FALSE	canonical	3	301	junction_1	64	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCGAACTGTTCTTGGGA	NA	False	NA	5	True	AATAAA	-18	NA	137777157	137778372	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_137777484_137777563_137777808_137777887
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102136	chr5	+	581	1	NIC	ENSMUSG00000029725.11	novel	956	4	NA	NA	-14	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCGAACTGTTCTTGGGA	NA	False	NA	5	True	AATAAA	-18	NA	137777791	137778372	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_137777800_137778400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102138	chr5	-	1478	4	FSM	ENSMUSG00000029726.17	ENSMUST00000031740.16	3128	4	1650	0	1650	0	multi-exon	FALSE	canonical	3	137	junction_2	12.2474487139159	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTCCAGCACTTTCTA	4376	False	NA	-6	True	AATAAA	-29	NA	137783275	137780167	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_137780747_137780856_137780984_137781391_137781611_137782722
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102181	chr5	+	1106	10	NNC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	-9	9	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	1463.99962895496	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCAGTGGCTTTGTCCTC	NA	False	NA	20	True	AATAAA	-21	NA	138159352	138162249	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_138159445_138159636_138159760_138159935_138160066_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102219	chr5	+	253	1	ISM	ENSMUSG00000019494.15	ENSMUST00000019638.15	1787	10	2665	658	959	10	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGTGGCTTTGTCCTCT	292	False	NA	21	True	AATAAA	-22	NA	138161997	138162250	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_138162000_138162200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102226	chr5	-	340	1	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	793	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTAGAGTTTTTAGTAT	9215	False	NA	-9	True	AATAAA	-31	NA	138163185	138162845	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_138162800_138163200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102259	chr5	+	183	1	ISM	ENSMUSG00000019518.12	ENSMUST00000019662.11	3479	15	8245	0	3678	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGGTGCATTCCTATA	6344	False	NA	18	True	NA	NA	NA	138178508	138178691	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_138178500_138178700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102283	chr5	+	325	1	ISM	ENSMUSG00000050552.9	ENSMUST00000062067.8	877	4	3589	0	3240	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGTGTGCACAGAATGGT	1203	False	NA	35	True	AATAAA	-27	NA	138257332	138257657	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_138257300_138257700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102322	chr5	+	985	1	ISM	ENSMUSG00000025857.11	ENSMUST00000026975.11	3450	13	35301	2	18404	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGGCCATCTGTGTG	4198	False	NA	9	True	ATTAAA	-17	NA	139171278	139172263	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_139171300_139172300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102325	chr5	+	1392	12	ISM	ENSMUSG00000036817.15	ENSMUST00000110884.9	3955	22	-23	14971	0	281	5prime_fragment	FALSE	canonical	3	224	junction_8	258.085289253234	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCCAAAGGTAACCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	139186391	139220579	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102332	chr5	+	1170	11	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	0	281	combination_of_known_junctions	FALSE	canonical	3	224	junction_6	289.799240854768	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCCAAAGGTAACCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	139186421	139220579	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102334	chr5	+	1281	12	ISM	ENSMUSG00000036817.15	ENSMUST00000078690.13	2608	22	-13	13725	0	281	5prime_fragment	FALSE	canonical	3	224	junction_6	242.022640836939	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCCAAAGGTAACCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	139186421	139220579	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102376	chr5	-	520	1	ISM	ENSMUSG00000053553.12	ENSMUST00000066052.12	1429	5	100244	0	95272	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGACTTTTTGCCTGTC	NA	False	NA	-6	True	NA	NA	NA	139346013	139345493	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_139345500_139346000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102392	chr5	-	770	1	ISM	ENSMUSG00000053581.14	ENSMUST00000079996.13	3169	7	12564	5	6958	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATTCTAGACAGTTT	2881	False	NA	-11	True	AATAAA	-19	NA	139457740	139456970	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_139457000_139457700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102421	chr5	-	695	2	NNC	ENSMUSG00000029554.16	novel	1603	7	NA	NA	98598	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCGGATTGTGTCCAAG	NA	False	NA	-8	True	AATAAA	-18	NA	140002623	139994452	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_139995030_140002505
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102439	chr5	+	835	5	NNC	ENSMUSG00000036639.13	novel	954	5	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	79.3737204621278	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGTGTGACTACAGCG	NA	False	NA	10	True	NA	NA	NA	140317682	140323892	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_140317711_140318177_140318229_140320209_140320375_140321067_140321114_140323347
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102446	chr5	+	944	5	FSM	ENSMUSG00000036639.13	ENSMUST00000110827.8	744	5	-4	-196	-4	0	multi-exon	FALSE	canonical	2	4	junction_1	84.8071341338687	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGTGTGACTACAGCG	NA	False	NA	10	True	NA	NA	NA	140317704	140323892	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_140317742_140318177_140318229_140320209_140320375_140321067_140321214_140323347
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102485	chr5	+	712	1	ISM	ENSMUSG00000000148.18	ENSMUST00000041588.13	3333	14	13657	0	13602	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTCTTCTCTTTGAGG	1954	False	NA	NA	False	NA	NA	NA	140704422	140705134	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_140704400_140705100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102511	chr5	+	664	1	ISM	ENSMUSG00000029578.16	ENSMUST00000036872.16	5171	12	37334	3049	4362	52	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGACTAGCTTCCTCC	NA	False	NA	20	True	ATTAAA	-20	NA	142652630	142653294	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_142652600_142653300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102526	chr5	-	1907	6	NNC	ENSMUSG00000029580.15	novel	1920	6	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_3	1656.31755409402	549	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTCTGTGGCTTT	8906	False	NA	-1	True	AATAAA	-27	NA	142892492	142888869	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_142889697_142889821_142890004_142890098_142890538_142890987_142891232_142891318_142891448_142892406
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102528	chr5	-	1907	6	NNC	ENSMUSG00000029580.15	novel	1920	6	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_4	1652.22787774568	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTCTGTGGCTTT	8906	False	NA	-1	True	AATAAA	-27	NA	142892492	142888869	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_142889697_142889821_142890004_142890098_142890538_142890991_142891232_142891314_142891448_142892406
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102575	chr5	+	497	1	Intergenic	novelGene_360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTTTGAGGTCAAGTC	NA	False	NA	NA	False	AATAAA	-29	NA	143085044	143085541	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_+_143085000_143085500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102578	chr5	+	608	2	Intergenic	novelGene_361	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTAGTGTTGTCGCTCTTTT	NA	False	NA	NA	False	NA	NA	NA	143149570	143150483	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_+_143149666_143149970
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102610	chr5	-	1342	8	FSM	ENSMUSG00000001844.11	ENSMUST00000159813.8	1341	8	0	-1	0	0	multi-exon	TRUE	canonical	3	40	junction_2	78.3753397284568	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTTTCTCATCATTG	5305	False	NA	-13	True	AATACA	-26	NA	143314975	143302243	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_143302588_143305985_143306231_143307509_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314920
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102649	chr5	+	437	2	FSM	ENSMUSG00000089889.3	ENSMUST00000160231.2	501	2	61	3	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCGAAGGCCTTTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	143315062	143318456	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_143315109_143318065
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102651	chr5	+	616	3	FSM	ENSMUSG00000089889.3	ENSMUST00000162890.2	600	3	-19	3	0	-3	multi-exon	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATAATGTCGAAGGCCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	143315062	143318453	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_143315109_143316458_143316641_143318065
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102672	chr5	-	348	1	NIC	ENSMUSG00000001847.15	novel	4159	6	NA	NA	10502	301	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCTTAAAGCCTTATTT	NA	False	NA	3	True	ATTAAA	-22	NA	143492861	143492513	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_143492500_143492900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102696	chr5	-	1070	4	FSM	ENSMUSG00000029610.14	ENSMUST00000100483.3	1073	4	7	-4	-1	4	multi-exon	FALSE	canonical	3	207	junction_3	226.993881464286	310	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTTTATTTTAAAGTG	NA	False	NA	-14	True	AATAAA	-20	NA	143846658	143839517	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846518
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102762	chr5	+	1637	10	FSM	ENSMUSG00000029621.15	ENSMUST00000031625.15	1632	10	-2	-3	-2	3	multi-exon	TRUE	canonical	3	332	junction_5	31.8084545015595	787	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCTTTATACTCTTTC	NA	False	NA	25	True	ATTAAA	-26	NA	145020637	145045574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_+_145020783_145027962_145028057_145029267_145029373_145032861_145033085_145034025_145034134_145037866_145038080_145041251_145041328_145041507_145041702_145043854_145043946_145045186
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102805	chr5	-	729	1	NIC	ENSMUSG00000029623.15	novel	2353	6	NA	NA	5095	435	mono-exon	FALSE	NA	NA	NA	NA	NA	282	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCAGTTTCTCTATC	NA	False	NA	-17	True	ATTAAA	-20	NA	145067187	145066458	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_145066500_145067200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102828	chr5	-	1347	7	NNC	ENSMUSG00000029623.15	novel	2353	6	NA	NA	-27	430	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	223.2664078828	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTTTGGCAGTTTCT	NA	False	NA	-22	True	ATTAAA	-15	NA	145076835	145066463	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_145067186_145068174_145068327_145069668_145069791_145071874_145071983_145073711_145073800_145073901_145073998_145076776
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102866	chr5	-	1134	2	ISM	ENSMUSG00000029624.11	ENSMUST00000031628.10	3087	9	15681	0	15529	0	3prime_fragment	FALSE	canonical	3	97	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTGCGTCTCATATATA	NA	False	NA	2	True	AATAAA	-30	NA	145088237	145084323	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_145085316_145088095
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102942	chr5	-	1974	3	FSM	ENSMUSG00000029627.13	ENSMUST00000031632.9	1967	3	-21	14	-21	-14	multi-exon	FALSE	canonical	3	18	junction_2	1	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTTGTGATTGTTCAG	1570	False	NA	NA	False	NA	NA	NA	145138699	145131769	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_145133010_145135486_145135611_145138089
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102975	chr5	+	1537	3	ISM	ENSMUSG00000029635.16	ENSMUST00000159615.2	1976	6	4588	-55	3133	0	3prime_fragment	FALSE	canonical	3	84	junction_1	10.5	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	4748	False	NA	NA	False	AATAAA	-20	NA	146236307	146239684	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_146236387_146236501_146236661_146238385
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000102980	chr5	+	1025	1	ISM	ENSMUSG00000029635.16	ENSMUST00000162494.8	2973	12	70620	0	5485	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	7100	False	NA	NA	False	AATAAA	-20	NA	146238659	146239684	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_146238700_146239700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103003	chr5	+	1496	4	NIC	ENSMUSG00000041453.13	novel	1856	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	6955	junction_1	2156.18680905796	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	2	True	AATAAA	-16	NA	146769954	146772796	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_146769982_146770993_146771073_146771257_146772525_146772673
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103004	chr5	+	740	5	NIC	ENSMUSG00000041453.13	novel	1856	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	6955	junction_1	2954.52520508795	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	2	True	AATAAA	-16	NA	146769954	146772796	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_146769982_146770993_146771320_146771801_146771915_146772373_146772525_146772673
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103005	chr5	+	1037	5	NIC	ENSMUSG00000041453.13	novel	1856	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	6955	junction_1	2767.33775495511	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	2	True	AATAAA	-16	NA	146769954	146772796	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_146769982_146770993_146771073_146771257_146771915_146772373_146772525_146772673
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103006	chr5	+	1014	5	NIC	ENSMUSG00000041453.13	novel	1856	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	6955	junction_1	2520.4932428991	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	2	True	AATAAA	-16	NA	146769954	146772796	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_146769982_146770993_146771073_146771257_146771320_146771801_146772525_146772673
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103049	chr5	+	874	1	ISM	ENSMUSG00000041453.13	ENSMUST00000035983.12	1856	6	3269	0	953	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTGTTAGTGATGGTT	NA	False	NA	NA	False	ATTAAA	-19	NA	146772968	146773842	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_+_146773000_146773800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103093	chr5	+	554	1	NIC	ENSMUSG00000029642.12	novel	1196	2	NA	NA	969	0	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGAGTGGTTTCTCTTC	NA	False	NA	22	True	NA	NA	NA	147015342	147015896	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_147015300_147015900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103096	chr5	+	715	1	NIC	ENSMUSG00000029642.12	novel	1137	3	NA	NA	5281	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTCCTCTTTTGGGTGT	NA	False	NA	16	True	AATAAA	-17	NA	147047456	147048171	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_147047500_147048200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103121	chr5	+	742	6	NNC	ENSMUSG00000029649.11	novel	1579	6	NA	NA	-8	171	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1297.30912276142	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGTGTGGTTGGGTTT	NA	False	NA	34	True	AATAAA	-24	NA	147797429	147812592	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_147797506_147799370_147799461_147805532_147805594_147806221_147806324_147809375_147809470_147812273
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103129	chr5	+	735	6	NNC	ENSMUSG00000029649.11	novel	1579	6	NA	NA	-5	171	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1297.30912276142	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGTGTGGTTGGGTTT	NA	False	NA	34	True	AATAAA	-24	NA	147797432	147812592	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_147797502_147799370_147799461_147805532_147805594_147806221_147806324_147809375_147809470_147812273
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103130	chr5	+	741	6	NNC	ENSMUSG00000029649.11	novel	1579	6	NA	NA	-5	171	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1295.8027010313	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGTGTGGTTGGGTTT	NA	False	NA	34	True	AATAAA	-24	NA	147797432	147812592	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_147797502_147799362_147799461_147805532_147805598_147806227_147806324_147809375_147809470_147812273
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103154	chr5	+	320	1	NIC	ENSMUSG00000029649.11	novel	1579	6	NA	NA	3029	171	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGTGTGGTTGGGTTT	NA	False	NA	34	True	AATAAA	-24	NA	147812272	147812592	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_+_147812300_147812600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103163	chr5	-	1344	6	Antisense	novelGene_ENSMUSG00000029651.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_5	7.83326241102646	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGTAGTATACTCTTTC	8597	False	NA	-1	True	NA	NA	NA	147949136	147941084	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr5_-_147941718_147942673_147942827_147943327_147943469_147943860_147944081_147945259_147945334_147949013
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103165	chr5	-	1430	5	Antisense	novelGene_ENSMUSG00000029651.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_3	9.83298021964857	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGTAGTATACTCTTTC	8597	False	NA	-1	True	NA	NA	NA	147949136	147941084	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr5_-_147941718_147942673_147942827_147943327_147943469_147943700_147944081_147949013
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103193	chr5	-	264	1	Genic_Genomic	ENSMUSG00000001687.16	novel	NA	NA	NA	NA	32694	2	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTTGTTGATGATTTAA	NA	False	NA	-2	True	AATAAA	-23	NA	148441706	148441442	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr5_-_148441400_148441700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103208	chr5	-	512	2	Intergenic	novelGene_362	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTCTTGGCAGAGTTT	NA	False	NA	NA	False	NA	NA	NA	148806311	148804956	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_-_148805297_148806139
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103224	chr5	-	2370	5	FSM	ENSMUSG00000066551.13	ENSMUST00000085546.13	2838	5	-52	520	-52	-520	multi-exon	FALSE	canonical	3	5649	junction_4	1171.94720444225	2753	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAATGACTTTCACTTAA	6712	False	NA	-2	True	AATAAA	-29	NA	148989902	148984031	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397_148987562_148989709
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103242	chr5	-	177	1	Intergenic	novelGene_363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTGTTGCGTTTTCCTT	3663	False	NA	23	True	NA	NA	NA	149049402	149049225	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr5_-_149049200_149049400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103250	chr5	-	1899	2	FSM	ENSMUSG00000024437.7	ENSMUST00000201946.2	737	2	-173	-989	17	989	multi-exon	FALSE	canonical	3	30	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTAGTTCTTTATTTCCA	NA	False	NA	NA	False	AATAAA	-8	NA	149093002	149090928	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_149092357_149092531
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103251	chr5	-	1714	2	NNC	ENSMUSG00000024437.7	novel	737	2	NA	NA	17	989	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTAGTTCTTTATTTCCA	NA	False	NA	NA	False	AATAAA	-8	NA	149093002	149090928	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_-_149092357_149092716
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103279	chr5	-	634	1	NIC	ENSMUSG00000029657.16	novel	3140	19	NA	NA	1697	2	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGCTTTGTCTCCGA	NA	False	NA	-4	True	AATAAA	-26	NA	149540941	149540307	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr5_-_149540300_149540900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103297	chr5	-	636	1	FSM	ENSMUSG00000080002.3	ENSMUST00000116118.3	459	1	-56	-121	-56	121	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGATATATAGTTTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	149584744	149584108	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_149584100_149584700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103302	chr5	+	1083	11	NNC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	13	-9929	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_10	165.154503420282	25	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGTTCATTTTGA	NA	False	NA	NA	False	ATTAAA	-37	NA	149601707	149664671	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149664505
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103327	chr5	-	288	1	FSM	ENSMUSG00000029655.18	ENSMUST00000201384.2	7526	1	5030	2208	4288	56	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTATAATCTTTTGTG	NA	False	NA	-9	True	AATAAA	-25	NA	150566696	150566408	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr5_-_150566400_150566700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103348	chr5	-	243	1	ISM	ENSMUSG00000033970.16	ENSMUST00000038131.10	1317	9	8183	61	1072	2	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGTTTGTGTTTTA	NA	False	NA	-1	True	AATAAA	-22	NA	151566524	151566281	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr5_-_151566300_151566500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103359	chr6	-	381	2	Intergenic	novelGene_364	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGGTTTGTTGCATCTTT	NA	False	NA	NA	False	NA	NA	NA	3434543	3404756	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr6_-_3405056_3434461
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103367	chr6	+	3535	28	NNC	ENSMUSG00000001376.18	novel	3788	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	34.8382505832842	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTGTGTGAGACTACTA	3	True	NA	22	True	AATAAA	-19	NA	3498422	3603315	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594906_3598471_3598594_3600127_3600318_3602659
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103373	chr6	+	471	2	Intergenic	novelGene_365	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTGTGTGATCATTTT	NA	False	NA	NA	False	AATAAA	-18	NA	3806081	3807430	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr6_+_3806127_3807004
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103446	chr6	-	488	4	NNC	ENSMUSG00000042541.11	novel	1472	3	NA	NA	-6603	-994	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1556.6019258486	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGGTTCAGATGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	6585266	6558287	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_6558492_6560407_6560502_6578478_6578629_6585226
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103451	chr6	-	505	4	NNC	ENSMUSG00000042541.11	novel	1472	3	NA	NA	-6603	-994	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1556.6019258486	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGGTTCAGATGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	6585266	6558287	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_6558492_6560407_6560502_6578478_6578670_6585250
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103466	chr6	+	857	3	NNC	ENSMUSG00000042505.7	novel	966	3	NA	NA	6	-3573	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATAATAATGGAAGATGTA	-9	True	NA	NA	False	AATAAA	-5	NA	6956012	7039406	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_6956205_6957003_6957116_7038853
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103473	chr6	-	485	1	Intergenic	novelGene_366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACGTGGCTCTCTACC	2618	False	NA	NA	False	NA	NA	NA	7674708	7674223	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr6_-_7674200_7674700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103553	chr6	-	313	1	NIC	ENSMUSG00000012483.5	novel	670	4	NA	NA	2892	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTGGTCAATTGTTTT	2877	False	NA	-11	True	AATAAA	-14	NA	8256248	8255935	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_8255900_8256200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103558	chr6	+	144	1	Intergenic	novelGene_367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATGTAAAAATAAGATGCT	NA	False	NA	NA	False	NA	NA	NA	8993585	8993729	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr6_+_8993600_8993700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103562	chr6	+	495	1	Intergenic	novelGene_368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGTGGCTCCTGTTTTAG	NA	False	NA	NA	False	NA	NA	NA	11822859	11823354	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr6_+_11822900_11823400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103577	chr6	-	504	4	NNC	ENSMUSG00000029632.8	novel	610	4	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4464.95646364242	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTGTCACTATTTAATGC	-8	True	NA	-11	True	AATAAA	-15	NA	11907459	11900370	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_11900591_11905200_11905253_11906012_11906108_11907322
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103579	chr6	-	501	4	NNC	ENSMUSG00000029632.8	novel	610	4	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4464.95646364242	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTGTCACTATTTAATGC	-7	True	NA	-11	True	AATAAA	-15	NA	11907458	11900370	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_11900591_11905200_11905253_11906014_11906108_11907322
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103581	chr6	-	490	4	FSM	ENSMUSG00000029632.8	ENSMUST00000204084.3	409	4	-81	0	9	0	multi-exon	FALSE	canonical	3	31	junction_3	4235.12888430407	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTGTCACTATTTAATGC	-22	True	NA	-11	True	AATAAA	-15	NA	11907473	11900370	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_11900591_11905200_11905262_11906018_11906077_11907322
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103582	chr6	-	536	4	NNC	ENSMUSG00000029632.8	novel	610	4	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	4263.570829976	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTGTCACTATTTAATGC	-32	True	NA	-11	True	AATAAA	-15	NA	11907483	11900370	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_11900591_11905195_11905262_11906018_11906108_11907322
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103595	chr6	-	224	1	NIC	ENSMUSG00000029632.8	novel	610	4	NA	NA	6798	0	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTGTCACTATTTAATGC	6857	False	NA	-11	True	AATAAA	-15	NA	11900594	11900370	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_11900400_11900600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103605	chr6	+	646	5	ISM	ENSMUSG00000029629.18	ENSMUST00000115511.9	3336	18	71133	0	6177	0	3prime_fragment	FALSE	canonical	3	98	junction_4	31.2759891929896	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAATTCATATTTTTTT	NA	False	NA	12	True	AATAAA	-23	NA	11997047	12081204	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_11997194_12006809_12006861_12006983_12007106_12047825_12047944_12080995
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103607	chr6	+	220	1	ISM	ENSMUSG00000029629.18	ENSMUST00000115510.8	3353	17	81913	0	974	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTATTGTATGATTTA	NA	False	NA	NA	False	AATAAA	-17	NA	12007792	12008012	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_12007800_12008000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103613	chr6	+	303	1	FSM	ENSMUSG00000083620.2	ENSMUST00000121833.2	994	1	835	-144	835	144	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTTTACCTGAGATA	NA	False	NA	NA	False	AATAAA	-15	NA	12858230	12858533	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_12858200_12858500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103621	chr6	+	824	1	ISM	ENSMUSG00000029571.15	ENSMUST00000031556.14	6002	9	18604	3	18192	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGGGTCATCCTCTTG	NA	False	NA	15	True	AATAAA	-16	NA	13088441	13089265	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_13088400_13089300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103655	chr6	+	2442	7	FSM	ENSMUSG00000029552.20	ENSMUST00000115467.11	2440	7	0	-2	0	2	multi-exon	FALSE	canonical	3	87	junction_1	5.93717104351896	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGTCTTTCTATGTCCT	-34	True	NA	NA	False	AATAAA	-17	NA	17065147	17105824	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_17065313_17086135_17086222_17096126_17096380_17097259_17097590_17099702_17099919_17100280_17100440_17104591
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103697	chr6	+	752	4	NNC	ENSMUSG00000044155.12	novel	807	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	461.836190295506	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCTTTTCTTTCCT	-12	True	NA	17	True	AATAAA	-17	NA	18848636	18854052	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_18848763_18849624_18849666_18851634_18851767_18853599
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103722	chr6	-	1979	1	ISM	ENSMUSG00000029672.17	ENSMUST00000165576.8	2826	10	47668	0	20958	0	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTAGTAGTTGCAGTGAT	NA	False	NA	0	True	ATTAAA	-22	NA	22308497	22306518	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_22306500_22308500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103751	chr6	-	450	5	NNC	ENSMUSG00000023089.13	novel	875	5	NA	NA	-10	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1444.94714436204	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCCATGTTATTGACTT	-14	True	NA	-27	True	ATTAAA	-31	NA	24527579	24518660	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_24518824_24519190_24519257_24522657_24522775_24527267_24527317_24527524
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103787	chr6	-	166	1	Genic_Genomic	ENSMUSG00000023089.13	novel	NA	NA	NA	NA	4039	4	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCCATGTTATTGACTT	9203	False	NA	-27	True	ATTAAA	-31	NA	24518826	24518660	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr6_-_24518700_24518800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103793	chr6	+	182	1	Intergenic	novelGene_369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAATAGCTCCATTTACA	NA	False	NA	NA	False	NA	NA	NA	24911459	24911641	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr6_+_24911500_24911600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103810	chr6	+	269	1	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	408205	11	8510	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTACTGTCGTGGTGGAG	62	False	NA	19	True	AATAAA	-20	NA	28888551	28888820	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_28888600_28888800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103829	chr6	+	980	2	FSM	ENSMUSG00000043421.9	ENSMUST00000054445.9	982	2	7	-5	7	5	multi-exon	FALSE	canonical	3	124	junction_1	0	580	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGTTGACATGCCTGC	8	False	NA	19	True	AATAAA	-26	NA	29272631	29275450	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_29272810_29274648
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103840	chr6	+	3219	7	FSM	ENSMUSG00000029767.17	ENSMUST00000031779.17	3229	7	10	0	-3	0	multi-exon	FALSE	canonical	3	608	junction_2	154.523730647863	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTGTCTTTTATTCTC	-4	True	NA	118	True	AATAAA	-22	NA	29348114	29376674	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_29348208_29356469_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29372469_29372670_29374397
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103843	chr6	+	3213	7	FSM	ENSMUSG00000029767.17	ENSMUST00000090481.14	2670	7	0	-543	0	0	multi-exon	FALSE	canonical	3	300	junction_2	301.970979105977	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTATGTGTCTTTTATT	-1	True	NA	115	True	AATAAA	-19	NA	29348117	29376671	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_29348208_29356469_29356697_29361558_29361753_29366038_29366206_29366915_29366977_29372469_29372670_29374397
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103859	chr6	+	523	2	NNC	ENSMUSG00000004285.13	novel	703	2	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	0	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTACTGGTATGGATACG	3	True	NA	37	True	ATTAAA	-19	NA	29467751	29470511	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_29467829_29470065
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103880	chr6	+	482	2	NNC	ENSMUSG00000004285.13	novel	703	2	NA	NA	264	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTACTGGTATGGATACG	236	False	NA	37	True	ATTAAA	-19	NA	29468330	29470511	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_29468367_29470065
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103884	chr6	+	449	1	NIC	ENSMUSG00000004285.13	novel	703	2	NA	NA	1996	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTACTGGTATGGATACG	1968	False	NA	37	True	ATTAAA	-19	NA	29470062	29470511	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_+_29470100_29470500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103896	chr6	+	663	2	Intergenic	novelGene_370	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTGTATAATGTGTATTG	NA	False	NA	10	True	AATAAA	-20	NA	29639033	29642170	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr6_+_29639206_29641679
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103916	chr6	+	198	1	Intergenic	novelGene_371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTCTCCCACTAATGAC	NA	False	NA	NA	False	TTTAAA	-3	NA	30037849	30038047	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr6_+_30037800_30038000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103918	chr6	+	194	1	Intergenic	novelGene_372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCAGTCGACTGATAGTC	NA	False	NA	NA	False	NA	NA	NA	30038744	30038938	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr6_+_30038700_30038900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103928	chr6	+	486	1	ISM	ENSMUSG00000058440.15	ENSMUST00000132866.2	1253	5	24304	0	24304	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTGTCTCTGTGTAAT	NA	False	NA	NA	False	NA	NA	NA	30140417	30140903	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_30140400_30140900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103935	chr6	-	309	1	ISM	ENSMUSG00000039159.17	ENSMUST00000102993.10	4657	7	91266	1676	30530	-1676	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTTGATATTGATGGA	NA	False	NA	-1	True	AATAAA	-17	NA	30213272	30212963	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_30213000_30213300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103937	chr6	-	574	5	ISM	ENSMUSG00000039159.17	ENSMUST00000102993.10	4657	7	43547	3507	-17189	13	3prime_fragment	FALSE	canonical	3	201	junction_3	60.503615594442	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGGTCATTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	30260991	30214794	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_30215083_30221666_30221796_30241370_30241424_30242536_30242577_30260927
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000103950	chr6	+	1077	8	ISM	ENSMUSG00000029775.15	ENSMUST00000144272.8	1387	10	22752	-27	-3982	0	3prime_fragment	FALSE	canonical	3	178	junction_6	13.6665837064016	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTTAGTTTATGGACAT	NA	False	NA	6	True	AATACA	-20	NA	30439786	30450840	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104000	chr6	-	414	4	NNC	ENSMUSG00000025607.16	novel	333	4	NA	NA	-2	1463	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	102.009803450453	21	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGAGTTTTAATAAAATT	NA	False	NA	NA	False	AATAAA	-28	NA	30873701	30870368	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_30870543_30871781_30871863_30872476_30872530_30873595
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104010	chr6	+	2477	18	FSM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	77	8841	-16	2	multi-exon	FALSE	canonical	1	225	junction_9	99.990726213583	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTATATTTTTCTTTAG	NA	False	NA	19	True	AATAAA	-27	NA	31375746	31484905	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104016	chr6	+	341	1	ISM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	108895	8841	15009	2	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTATATTTTTCTTTAG	NA	False	NA	19	True	AATAAA	-27	NA	31484564	31484905	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_31484600_31484900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104034	chr6	-	1398	6	FSM	ENSMUSG00000053768.14	ENSMUST00000115091.2	1363	6	-28	-7	-8	7	multi-exon	FALSE	canonical	3	834	junction_1	31.2089730686545	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGTTTCTGCTTCAAT	NA	False	NA	-5	True	AATAAA	-23	NA	33037180	32828370	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271_33026360_33036934
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104040	chr6	+	1131	6	FSM	ENSMUSG00000029763.18	ENSMUST00000139132.2	1060	6	-8	-63	0	63	multi-exon	FALSE	canonical	1	3	junction_5	51.1640498787967	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTCTCTCTCTTTTTTT	NA	False	NA	NA	False	AATATA	-20	NA	33226062	33296394	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_33226174_33242874_33243065_33254121_33254317_33273667_33273853_33282219_33282330_33296054
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104071	chr6	+	1658	3	FSM	ENSMUSG00000038871.6	ENSMUST00000045372.6	2220	3	85	477	-64	-477	multi-exon	FALSE	canonical	3	82	junction_2	7.5	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCCTCGAGTGTGTGATG	NA	False	NA	24	True	AATAAA	-29	NA	34453226	34482071	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_34453358_34464224_34464886_34481205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104081	chr6	+	956	4	NNC	ENSMUSG00000029761.17	novel	4041	12	NA	NA	-13	4709	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	100.677703589226	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGAATGTGGTGGGTT	1244	False	NA	NA	False	ATTAAA	-25	NA	34686363	34723852	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_34686633_34718723_34718871_34722553_34722951_34723709
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104088	chr6	-	1488	4	FSM	ENSMUSG00000046806.14	ENSMUST00000115007.9	3326	4	-6	1844	-6	11	multi-exon	FALSE	canonical	3	11	junction_1	4.92160768674447	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTATTCAATCCTGTTCA	7591	False	NA	-9	True	NA	NA	NA	34855001	34850618	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_34851631_34852471_34852548_34853473_34853707_34854834
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104103	chr6	+	1407	9	NIC	ENSMUSG00000029848.12	novel	1455	9	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	1	6	junction_2	25.8202924073295	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTGTCCTGGCAGTG	NA	False	NA	14	True	TATAAA	-19	NA	34897882	34916280	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_+_34897990_34904653_34904789_34907295_34907372_34907817_34907903_34909932_34910221_34911014_34911301_34912517_34912592_34914967_34915080_34916036
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104128	chr6	+	619	3	NNC	ENSMUSG00000073155.13	novel	2521	3	NA	NA	-896	2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	483	84	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTGGTGAATTAATCCA	NA	False	NA	15	True	ATTAAA	-19	NA	35228692	35238574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_35228777_35237344_35237399_35238093
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104167	chr6	-	2266	1	ISM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	28563	154	28474	-154	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTTAGCAACATATTTAT	NA	False	NA	-24	True	AATAAA	-22	NA	35488260	35485994	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_35486000_35488300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104187	chr6	+	184	1	Intergenic	novelGene_373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAACAAACTAGTTAATTA	NA	False	NA	NA	False	NA	NA	NA	37723036	37723220	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr6_+_37723000_37723200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104195	chr6	+	1074	4	ISM	ENSMUSG00000029833.18	ENSMUST00000120238.2	3258	19	58155	-364	10083	0	3prime_fragment	FALSE	canonical	3	507	junction_1	56.468280181591	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37935576	37943231	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_37935630_37937715_37937791_37941637_37941788_37942435
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104217	chr6	-	617	1	ISM	ENSMUSG00000029826.15	ENSMUST00000031850.10	3400	9	38319	0	37989	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCAGTTGGATTTTTTT	6044	False	NA	-3	True	NA	NA	NA	38293219	38292602	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_38292600_38293200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104220	chr6	+	504	1	FSM	ENSMUSG00000057696.5	ENSMUST00000119767.2	348	1	-72	-84	-72	84	mono-exon	FALSE	NA	NA	NA	NA	NA	350	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAACATTCTCCCAGCAGC	1142	False	NA	NA	False	NA	NA	NA	38353669	38354173	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_38353700_38354200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104243	chr6	-	215	1	Genic_Genomic	ENSMUSG00000029924.13	novel	NA	NA	NA	NA	12366	3	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCCCTTAAGTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	39311918	39311703	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr6_-_39311700_39311900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104270	chr6	-	1368	4	NIC	ENSMUSG00000029922.16	novel	1511	5	NA	NA	20	0	combination_of_known_splicesites	FALSE	canonical	3	82	junction_1	1944.59061672802	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAGTCTGTGTGAAATG	NA	False	NA	-5	True	AATAAA	-16	NA	39397376	39377693	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_39378359_39382664_39382895_39387021_39387151_39397032
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104295	chr6	+	301	1	Intergenic	novelGene_374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAAAGAAAGTCT	NA	False	NA	NA	False	NA	NA	NA	39414815	39415116	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr6_+_39414800_39415100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104304	chr6	+	395	3	NNC	ENSMUSG00000085058.3	novel	370	4	NA	NA	-11	1821	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTAGGCTTGTTTGGGAA	NA	False	NA	NA	False	AATAAA	-15	NA	39504435	39507029	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_39504579_39506382_39506457_39506851
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104312	chr6	+	328	1	ISM	ENSMUSG00000046947.13	ENSMUST00000140364.8	3542	8	13550	1019	3478	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTTCTTCTTCTTA	NA	False	NA	16	True	AATACA	-16	NA	39564356	39564684	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_39564400_39564700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104385	chr6	-	439	3	ISM	ENSMUSG00000002413.16	ENSMUST00000101497.4	2253	18	101530	-45	19591	45	3prime_fragment	FALSE	canonical	3	30	junction_2	3	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACAGGTTCCCTTATATT	7071	False	NA	NA	False	ATTAAA	-23	NA	39600597	39591000	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_39591220_39592594_39592730_39600512
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104406	chr6	+	847	4	NIC	ENSMUSG00000029916.12	novel	785	8	NA	NA	8	140	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	289.012494924047	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTTAAGAATTTGATT	NA	False	NA	NA	False	AATAAA	-19	NA	40302428	40325179	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_+_40302465_40306426_40306534_40324345_40324386_40324515
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104464	chr6	+	1219	6	FSM	ENSMUSG00000029911.15	ENSMUST00000121360.8	1188	6	-28	-3	-13	3	multi-exon	FALSE	canonical	3	2472	junction_3	238.868666844356	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTATATTTTTCTTGAT	NA	False	NA	NA	False	ATTAAA	-18	NA	40448373	40457932	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104466	chr6	+	633	7	NNC	ENSMUSG00000029911.15	novel	933	7	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1037.38234942035	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGTTATATTTTTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	40448376	40457929	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_40448425_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104469	chr6	+	655	7	NNC	ENSMUSG00000029911.15	novel	933	7	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1038.11106502789	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGTTATATTTTTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	40448377	40457929	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_40448448_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104494	chr6	+	941	8	FSM	ENSMUSG00000029864.8	ENSMUST00000031897.8	930	8	-1	-10	-1	4	multi-exon	FALSE	canonical	3	11	junction_5	4.42165358301205	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGGTCTGTATCTGCC	NA	False	NA	12	True	AATAAA	-23	NA	42222867	42227385	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_42223028_42223483_42223566_42223744_42223874_42224417_42224519_42224667_42224704_42226312_42226430_42226772_42226867_42227163
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104500	chr6	+	1021	1	ISM	ENSMUSG00000029863.14	ENSMUST00000031895.13	3529	11	16503	0	1681	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCTGGTGTTTTTG	8578	False	NA	13	True	AATAAA	-20	NA	42258421	42259442	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_42258400_42259400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104508	chr6	+	1227	3	Intergenic	novelGene_375	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAACAACTCACTGTTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	44181736	44220153	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr6_+_44181855_44183154_44183225_44219114
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104511	chr6	-	1611	2	Antisense	novelGene_ENSMUSG00000039419.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGTGGTGTGGCTTATGA	NA	False	NA	NA	False	AATAAA	-9	NA	47167377	47160411	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr6_-_47161996_47167350
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104522	chr6	-	973	3	Antisense	novelGene_ENSMUSG00000039419.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	7.5	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTGATTTATGTTTTCT	NA	False	NA	42	True	ATTAAA	-17	NA	47167375	47161078	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr6_-_47161996_47167177_47167209_47167350
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104529	chr6	-	919	1	Intergenic	novelGene_376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTGATTTATGTTTTCT	NA	False	NA	42	True	ATTAAA	-17	NA	47161997	47161078	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr6_-_47161100_47162000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104540	chr6	-	2433	2	Antisense	novelGene_ENSMUSG00000039419.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	22	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTAGTGTAATTGGATTC	NA	False	NA	-15	True	AGTAAA	-18	NA	47167375	47161135	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr6_-_47161996_47165802
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104556	chr6	-	441	4	Antisense	novelGene_ENSMUSG00000039419.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	6.59966329107444	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTCCATCTCCATGCAT	NA	False	NA	NA	False	ATTAAA	-30	NA	47167375	47162225	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr6_-_47162501_47162607_47162718_47167177_47167209_47167350
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104592	chr6	-	655	5	NNC	ENSMUSG00000029687.17	novel	2115	18	NA	NA	1299	45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	404.101085744644	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTCCTAGAACATCA	NA	False	NA	-13	True	AATAAA	-24	NA	47510760	47507207	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_47507526_47508670_47508760_47508918_47509000_47509835_47509918_47510675
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104594	chr6	-	659	5	NNC	ENSMUSG00000029687.17	novel	2115	18	NA	NA	1299	45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	404.101085744644	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTCCTAGAACATCA	NA	False	NA	-13	True	AATAAA	-24	NA	47510760	47507207	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_47507530_47508670_47508760_47508918_47509000_47509835_47509918_47510675
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104597	chr6	-	665	5	NNC	ENSMUSG00000029687.17	novel	2115	18	NA	NA	1299	45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	404.101085744644	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTCCTAGAACATCA	NA	False	NA	-13	True	AATAAA	-24	NA	47510760	47507207	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_47507536_47508670_47508760_47508918_47509000_47509835_47509918_47510675
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104602	chr6	-	2447	19	ISM	ENSMUSG00000029687.17	ENSMUST00000081721.13	2787	20	17431	135	61	45	3prime_fragment	TRUE	canonical	3	406	junction_7	171.031583250392	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTCCTAGAACATCA	8739	False	NA	-13	True	AATAAA	-24	NA	47554533	47507207	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104610	chr6	+	182	1	Intergenic	novelGene_377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAATAATTATAATTTAC	944	False	NA	NA	False	NA	NA	NA	47546650	47546832	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr6_+_47546600_47546800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104615	chr6	-	93	1	Intergenic	novelGene_378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACCCTCCGCTCCTCAC	NA	False	NA	NA	False	NA	NA	NA	47640690	47640597	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr6_-_47640600_47640700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104630	chr6	-	709	1	ISM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	16581	0	16515	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTTGCCTTTTATTTT	6901	False	NA	23	True	TTTAAA	-24	NA	47773783	47773074	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_47773100_47773800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104655	chr6	+	495	1	FSM	ENSMUSG00000095526.3	ENSMUST00000117571.2	333	1	-66	-96	-66	96	mono-exon	FALSE	NA	NA	NA	NA	NA	3691	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTACAGAGCAAGCATCG	NA	False	NA	NA	False	AATGAA	-10	NA	48500385	48500880	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_48500400_48500900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104659	chr6	-	1210	1	FSM	ENSMUSG00000044211.10	ENSMUST00000056948.10	537	1	-41	-632	-41	632	mono-exon	FALSE	NA	NA	NA	NA	NA	423	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	48502065	48500855	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_48500900_48502100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104695	chr6	-	713	3	Intergenic	novelGene_379	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_2	24	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCAGCTTGTGTGCATT	NA	False	NA	NA	False	AGTAAA	-17	NA	48999402	48995451	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr6_-_48995945_48997387_48997456_48999250
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104716	chr6	+	204	1	NIC	ENSMUSG00000029815.13	novel	2819	4	NA	NA	1917	27	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTTTGATATGACT	388	False	NA	6	True	AATAAA	-15	NA	49061435	49061639	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_+_49061400_49061600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104741	chr6	-	1822	8	FSM	ENSMUSG00000029817.12	ENSMUST00000204189.3	1777	8	-42	-3	-19	3	multi-exon	FALSE	canonical	3	74	junction_2	153.460491492044	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCTCTTTATTTGATA	4571	False	NA	-1	True	AATAAA	-18	NA	49240986	49220854	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_49221666_49221801_49221870_49222415_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49240771
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104749	chr6	-	2120	9	NNC	ENSMUSG00000029817.12	novel	2090	9	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_7	180.182372889248	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTCTCTTTATTTGAT	4590	False	NA	-2	True	AATAAA	-17	NA	49240967	49220855	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49229730_49230043_49240771
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104760	chr6	+	1602	1	Genic_Genomic	ENSMUSG00000050786.9	novel	NA	NA	NA	NA	20681	7	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGGTTTGGTTTGGT	NA	False	NA	22	True	AATAAA	-26	NA	49316921	49318523	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr6_+_49316900_49318500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104776	chr6	+	1479	10	NNC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-63	-45618	at_least_one_novel_splicesite	FALSE	canonical	2	90	junction_1	75.6161521709205	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTGTTTTTTACTTT	110	False	NA	NA	False	AATAAA	-18	NA	49372474	49400668	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104791	chr6	+	2122	2	Antisense	novelGene_ENSMUSG00000108266.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTCATCATTTGTAATA	5101	False	NA	NA	False	AAAAAG	-3	NA	49400677	49520702	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr6_+_49401931_49519833
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104805	chr6	-	1528	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	-79	1674	-79	1000	multi-exon	FALSE	canonical	3	4909	junction_2	335	25493	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGTGGTCCTAAATTTT	NA	False	NA	NA	False	TATAAA	-20	NA	50543597	50541216	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_50542366_50542471_50542649_50543395
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104828	chr6	-	1545	11	FSM	ENSMUSG00000004980.17	ENSMUST00000204158.3	1542	11	0	-3	0	0	multi-exon	FALSE	canonical	3	287	junction_2	2968.11001312283	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446825	51438100	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_51438414_51438899_51439036_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104833	chr6	-	2951	12	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	615	junction_1	1927.31213939119	6610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446912	51438100	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_51438414_51438899_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104839	chr6	-	1626	12	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	499	junction_1	2846.0788655782	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446886	51438100	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_51438414_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104842	chr6	-	1701	13	FSM	ENSMUSG00000004980.17	ENSMUST00000203954.3	1703	13	2	0	0	0	multi-exon	FALSE	canonical	3	287	junction_2	3043.32879243911	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446825	51438100	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_51438414_51438899_51439036_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104891	chr6	-	1595	10	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2783.32051893258	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446825	51439739	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_51440235_51440386_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104896	chr6	-	1764	11	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	2188.27081505009	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446882	51439739	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444272_51446650
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104906	chr6	-	1673	11	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	874	junction_10	2893.40520667258	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446871	51439739	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_51440235_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104909	chr6	-	1715	11	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2192.8288692919	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446825	51439739	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442154_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104910	chr6	-	1699	11	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_6	2195.63763175985	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446825	51439739	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443294_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104994	chr6	+	2451	7	FSM	ENSMUSG00000038301.16	ENSMUST00000179365.8	2464	7	22	-9	-21	0	multi-exon	FALSE	canonical	3	50	junction_1	112.931272118144	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCGATTTCTTACTT	NA	False	NA	NA	False	ATTAAA	-24	NA	51521524	51567659	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_51521630_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000104997	chr6	-	1665	13	FSM	ENSMUSG00000059182.9	ENSMUST00000204778.3	3382	13	-19	1736	-19	8	multi-exon	FALSE	canonical	3	457	junction_9	27.4919180043073	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCCTGGTATTTTATTC	809	False	NA	1	True	AATAAA	-26	NA	51989548	51836137	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_51836551_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105010	chr6	-	1702	13	NNC	ENSMUSG00000059182.9	novel	3382	13	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	141.475753713804	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGACTTAGCCTGGTAT	830	False	NA	-6	True	AATAAA	-19	NA	51989527	51836144	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_51836616_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105103	chr6	+	239	2	ISM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	32938	15561	5790	8415	internal_fragment	FALSE	canonical	3	527	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTGGCTCATGGTGCT	2240	False	NA	NA	False	NA	NA	NA	52723651	52728204	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_52723756_52728069
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105127	chr6	+	699	1	ISM	ENSMUSG00000005225.16	ENSMUST00000119706.8	6739	14	50014	16	41978	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCTTCAAAGGGTTTTGT	NA	False	NA	16	True	AATAAA	-26	NA	54622109	54622808	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_54622100_54622800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105141	chr6	+	1837	1	Intergenic	novelGene_380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	54800089	54801926	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr6_+_54800100_54801900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105143	chr6	+	1685	5	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	7337	-3764	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	273.671792481432	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAATGGTTAAGAATACTG	NA	False	NA	16	True	AATAAA	-18	NA	54801769	54866721	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_54801890_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105153	chr6	-	809	4	FSM	ENSMUSG00000002797.10	ENSMUST00000204301.3	431	4	-91	-287	-2	3	multi-exon	FALSE	canonical	3	46	junction_2	52.7320269538984	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCGTGGGTTCTCCTGTG	2698	False	NA	1	True	ATTAAA	-35	NA	54969937	54962629	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_54962987_54963817_54963954_54966484_54966543_54969679
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105172	chr6	+	287	1	Genic_Genomic	ENSMUSG00000029777.11	novel	NA	NA	NA	NA	29123	4	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGTGTTTCCATTTTT	NA	False	NA	39	True	ATTAAA	-33	NA	55056202	55056489	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr6_+_55056200_55056500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105183	chr6	-	496	5	NNC	ENSMUSG00000091625.9	novel	494	5	NA	NA	-1	6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	663.733003548867	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATTTATTATGTCGAAG	NA	False	NA	NA	False	AATAAA	-22	NA	56681669	56678041	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_56678275_56679080_56679154_56679986_56680019_56680298_56680395_56681607
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105216	chr6	+	1330	1	Genic_Genomic	ENSMUSG00000029781.8	novel	NA	NA	NA	NA	28699	3	mono-exon	FALSE	NA	NA	NA	NA	NA	1015	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTTATGGTATTTTA	NA	False	NA	39	True	CATAAA	-17	NA	56855016	56856346	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr6_+_56855000_56856300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105230	chr6	-	1146	2	FSM	ENSMUSG00000043162.8	ENSMUST00000053386.6	3573	2	-28	2455	-28	-2455	multi-exon	FALSE	canonical	3	182	junction_1	0	665	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGTTTGCAGTGGTGGA	NA	False	NA	NA	False	AATAAA	-27	NA	57669091	57666015	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_57666864_57668793
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105235	chr6	+	1748	1	Genic_Genomic	ENSMUSG00000062190.13	novel	NA	NA	NA	NA	34612	7	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTCTTAATATTTTCTC	7252	False	NA	15	True	AATAAA	-25	NA	57714683	57716431	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr6_+_57714700_57716400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105268	chr6	+	1298	1	ISM	ENSMUSG00000049232.4	ENSMUST00000062626.4	3007	2	1866	0	1866	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGATGACTTTTTCTGAA	NA	False	NA	9	True	NA	NA	NA	59187720	59189018	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_59187700_59189000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105300	chr6	+	723	3	FSM	ENSMUSG00000029920.10	ENSMUST00000204696.3	734	3	12	-1	-10	1	multi-exon	FALSE	canonical	3	133	junction_2	64	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGCAGAGCATTATGGAT	1966	False	NA	6	True	AATAAA	-16	NA	65019831	65021188	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_65019946_65020189_65020430_65020819
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105336	chr6	+	382	2	Antisense	novelGene_ENSMUSG00000107176.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTAGGCTTCTTGTATGT	NA	False	NA	NA	False	NA	NA	NA	66852243	66852754	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr6_+_66852499_66852627
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105340	chr6	-	466	2	Genic_Genomic	ENSMUSG00000107176.2	novel	423	1	NA	NA	-27	61	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACAGAACTCCAAATAGAC	NA	False	NA	1	True	ATTAAA	-28	NA	66852754	66852243	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr6_-_66852503_66852547
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105344	chr6	-	401	2	Genic_Genomic	ENSMUSG00000107176.2	novel	423	1	NA	NA	-27	61	multi-exon	FALSE	canonical	1	13	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACAGAACTCCAAATAGAC	NA	False	NA	1	True	ATTAAA	-28	NA	66852754	66852243	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr6_-_66852599_66852708
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105347	chr6	-	433	2	Genic_Genomic	ENSMUSG00000107176.2	novel	423	1	NA	NA	-27	61	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACAGAACTCCAAATAGAC	NA	False	NA	1	True	ATTAAA	-28	NA	66852754	66852243	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr6_-_66852631_66852708
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105476	chr6	+	369	2	NNC	ENSMUSG00000105463.2	novel	362	2	NA	NA	-88	2142	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTTAATTCTGTCTGGA	3841	False	NA	NA	False	NA	NA	NA	68155696	68158690	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_68155838_68158462
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105481	chr6	-	692	1	ISM	ENSMUSG00000053604.6	ENSMUST00000066134.6	1829	9	25821	0	7281	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGTCTTCTCTGCCGA	616	False	NA	-5	True	AATAAA	-20	NA	70743395	70742703	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_70742700_70743400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105484	chr6	+	696	1	ISM	ENSMUSG00000031668.15	ENSMUST00000034093.15	4513	17	60030	5	7781	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATAGTTGACTCTTATT	NA	False	NA	NA	False	AATAAA	-17	NA	70881528	70882224	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_70881500_70882200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105488	chr6	+	486	1	FSM	ENSMUSG00000068396.10	ENSMUST00000121998.2	354	1	-38	-94	-38	94	mono-exon	FALSE	NA	NA	NA	NA	NA	2435	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAGAACAATGAAAGAGCC	NA	False	NA	NA	False	NA	NA	NA	71101555	71102041	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_71101600_71102000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105511	chr6	+	2606	6	FSM	ENSMUSG00000053119.12	ENSMUST00000059462.12	2654	6	55	-7	0	7	multi-exon	FALSE	canonical	3	336	junction_5	32.5490399243972	800	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGCCTTTGGTGTTTA	NA	False	NA	30	True	NA	NA	NA	71520835	71558570	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_71521018_71529382_71529444_71537880_71538061_71551098_71551221_71554714_71554830_71556624
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105603	chr6	-	474	1	NIC	ENSMUSG00000056305.5	novel	2244	13	NA	NA	14126	-91	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCTGTTGTTTCATATA	NA	False	NA	-24	True	ATTAAA	-19	NA	72296225	72295751	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_72295800_72296200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105616	chr6	+	189	1	ISM	ENSMUSG00000055912.9	ENSMUST00000069695.9	1546	8	4123	4	3344	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGCAGTGTGTTCTGGA	NA	False	NA	6	True	ATTAAA	-17	NA	72336552	72336741	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_72336600_72336700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105628	chr6	-	1412	5	NNC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	16	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	413.628154264189	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGTGGTTCTGCTGTGTT	8428	False	NA	NA	False	TATAAA	-16	NA	72339395	72336695	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_72337618_72337852_72337933_72338099_72338210_72338394_72338523_72339223
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105632	chr6	-	1388	5	NNC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	413.628154264189	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	8447	False	NA	NA	False	TATAAA	-15	NA	72339376	72336696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_72337614_72337852_72337933_72338099_72338210_72338394_72338523_72339223
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105633	chr6	-	1383	5	NNC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	413.628154264189	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	8447	False	NA	NA	False	TATAAA	-15	NA	72339376	72336696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_72337614_72337857_72337933_72338099_72338210_72338394_72338523_72339223
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105640	chr6	-	1352	5	NNC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_1	452.691395986272	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	8447	False	NA	NA	False	TATAAA	-15	NA	72339376	72336696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_72337618_72337857_72337933_72338099_72338210_72338394_72338523_72339258
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105641	chr6	-	1357	5	NNC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	467.240302200056	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	8447	False	NA	NA	False	TATAAA	-15	NA	72339376	72336696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_72337618_72337852_72337933_72338099_72338210_72338394_72338523_72339258
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105649	chr6	-	1320	4	NIC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	8	junction_1	460.637480985741	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	8447	False	NA	NA	False	TATAAA	-15	NA	72339376	72336696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_72337626_72338099_72338210_72338394_72338523_72339223
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105650	chr6	-	1232	4	FSM	ENSMUSG00000055850.13	ENSMUST00000126065.8	638	4	-30	-564	0	0	multi-exon	FALSE	canonical	2	4	junction_3	435.806022088829	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	8447	False	NA	NA	False	TATAAA	-15	NA	72339376	72336696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_72337626_72337857_72337933_72338099_72338210_72339258
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105651	chr6	-	1267	4	FSM	ENSMUSG00000055850.13	ENSMUST00000151063.2	617	4	-28	-622	0	0	multi-exon	FALSE	canonical	2	47	junction_3	415.627236836086	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	8447	False	NA	NA	False	TATAAA	-15	NA	72339376	72336696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_72337626_72337857_72337933_72338099_72338210_72339223
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105658	chr6	-	1391	5	NNC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	422.626534306591	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	8447	False	NA	NA	False	TATAAA	-15	NA	72339376	72336696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339227
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105669	chr6	-	931	1	FSM	ENSMUSG00000055850.13	ENSMUST00000206319.2	2410	1	1479	0	423	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	7548	False	NA	NA	False	TATAAA	-15	NA	72337627	72336696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_72336700_72337600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105670	chr6	-	1627	4	NIC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	875	junction_1	75.1546553596131	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	8447	False	NA	NA	False	TATAAA	-15	NA	72339376	72336696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_72337933_72338099_72338210_72338394_72338523_72339223
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105695	chr6	-	546	1	Genic_Genomic	ENSMUSG00000053907.11	novel	NA	NA	NA	NA	1739	92	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACGATAAAAGCTTAGTGA	NA	False	NA	81	True	AATAAA	-15	NA	72410235	72409689	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr6_-_72409700_72410200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105703	chr6	-	1408	9	FSM	ENSMUSG00000053907.11	ENSMUST00000206692.2	1400	9	-2	-6	0	6	multi-exon	FALSE	canonical	3	42	junction_1	259.956697115116	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTCGCCATGAACTTTT	NA	False	NA	NA	False	AATAAA	-31	NA	72416541	72411521	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_72411723_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105732	chr6	-	1182	1	Genic_Genomic	ENSMUSG00000056429.5	novel	NA	NA	NA	NA	7399	12	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTACATGTATTAATACTA	NA	False	NA	-25	True	AATAAA	-24	NA	72586584	72585402	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr6_-_72585400_72586600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105741	chr6	+	197	1	Intergenic	novelGene_381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGGCCTCATTATATAG	NA	False	NA	NA	False	NA	NA	NA	72804162	72804359	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr6_+_72804200_72804400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105754	chr6	-	586	3	FSM	ENSMUSG00000079523.9	ENSMUST00000114050.8	570	3	-3	-13	-3	13	multi-exon	FALSE	canonical	3	26814	junction_1	200.5	21572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAGTTGAGTATGCGT	NA	False	NA	2	True	AATAAA	-33	NA	72935474	72934316	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_72934636_72934895_72935008_72935319
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105763	chr6	-	486	3	NNC	ENSMUSG00000079523.9	novel	570	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13607.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTGGTCTGAATTTTTTA	NA	False	NA	-11	True	AATAAA	-20	NA	72935383	72934329	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_72934636_72934891_72935008_72935319
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105770	chr6	-	476	3	NNC	ENSMUSG00000079523.9	novel	570	3	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13607.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGGTCTGAATTTTTT	NA	False	NA	-12	True	AATAAA	-19	NA	72935383	72934330	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_72934625_72934889_72935008_72935319
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105775	chr6	-	486	3	NNC	ENSMUSG00000079523.9	novel	570	3	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13607.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGGTCTGAATTTTTT	NA	False	NA	-12	True	AATAAA	-19	NA	72935382	72934330	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_72934636_72934889_72935008_72935319
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105788	chr6	-	469	3	NNC	ENSMUSG00000079523.9	novel	433	2	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13607.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGGCGTGGTCTGAATT	NA	False	NA	-16	True	AATAAA	-15	NA	72935382	72934334	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_72934625_72934891_72935008_72935319
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105808	chr6	+	1261	9	NNC	ENSMUSG00000052738.15	novel	1519	9	NA	NA	-12	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	491.07813469447	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTGTGAAGACTTTTT	2573	False	NA	15	True	AATAAA	-19	NA	73225622	73253890	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_73225737_73233153_73233258_73237457_73237575_73240790_73241004_73241212_73241275_73246297_73246382_73247953_73248106_73252183_73252373_73253664
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105819	chr6	+	811	5	ISM	ENSMUSG00000052738.15	ENSMUST00000064740.9	1519	9	15746	4	3768	3	3prime_fragment	FALSE	canonical	3	1430	junction_2	56.2511111001374	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTGTGAAGACTTTTT	NA	False	NA	15	True	AATAAA	-19	NA	73241110	73253890	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_73241271_73246297_73246382_73247953_73248106_73252183_73252373_73253664
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105840	chr6	-	1412	5	FSM	ENSMUSG00000030045.11	ENSMUST00000032124.9	5000	5	-8	3596	-8	527	multi-exon	FALSE	canonical	3	603	junction_3	40.9839907768875	270	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATGTCAGTTTATTGC	NA	False	NA	NA	False	ATTAAA	-36	NA	81942947	81938427	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105880	chr6	-	652	4	FSM	ENSMUSG00000030042.16	ENSMUST00000160281.8	648	4	-4	0	-4	0	multi-exon	FALSE	canonical	1	1	junction_1	443.647257276419	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACATGTGTGGTATGTGCT	NA	False	NA	NA	False	AATAAA	-33	NA	82629855	82598832	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_82599107_82628417_82628460_82629063_82629149_82629604
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105954	chr6	+	625	3	NNC	ENSMUSG00000030041.10	novel	1945	10	NA	NA	20	-72237	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	225	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGGTTCAGGGAGTG	NA	False	NA	NA	False	AATAAA	-18	NA	82923902	82934567	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_82923934_82933389_82933688_82934271
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105967	chr6	-	1732	5	NIC	ENSMUSG00000068335.7	novel	1807	5	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	11.7686022959398	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCGTATGAATGAGCAC	NA	False	NA	-1	True	ATTAAA	-22	NA	83010448	83007911	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_83009042_83009285_83009397_83009515_83009610_83009747_83010048_83010351
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000105977	chr6	-	1616	7	NNC	ENSMUSG00000068329.13	novel	1725	8	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	203.551522279305	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGGTTGGATCTTCTCC	1991	False	NA	2	True	AATAAA	-31	NA	83031458	83028246	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029803_83030309_83030505_83030593_83030799_83030901
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106009	chr6	+	1661	11	NIC	ENSMUSG00000068328.11	novel	1265	11	NA	NA	0	0	intron_retention	TRUE	canonical	3	960	junction_9	76.9269783626005	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTTGCCTCTTTGG	5421	False	NA	9	True	ATTAAA	-19	NA	83031709	83034663	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_+_83031814_83031891_83032030_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106012	chr6	+	1437	12	NNC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	320.474776924219	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTTGCCTCTTTGG	5421	False	NA	9	True	ATTAAA	-19	NA	83031709	83034663	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033628_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106014	chr6	+	1497	12	FSM	ENSMUSG00000068328.11	ENSMUST00000203915.4	1491	12	-2	-4	0	0	multi-exon	FALSE	canonical	3	25	junction_10	313.3608012109	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTTGCCTCTTTGG	5421	False	NA	9	True	ATTAAA	-19	NA	83031709	83034663	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034194_83034376_83034478
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106026	chr6	+	1631	11	NNC	ENSMUSG00000068328.11	novel	1265	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	56	junction_7	319.708367109777	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTTGCCTCTTTGG	5423	False	NA	9	True	ATTAAA	-19	NA	83031711	83034663	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_83031814_83031891_83032030_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033767_83033860_83033958_83034075_83034256_83034376_83034478
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106044	chr6	+	915	9	NNC	ENSMUSG00000069678.11	novel	918	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.3345955447801	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATCTTCCTTCTTAC	106	False	NA	24	True	AATAAA	-16	NA	83055326	83057836	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_83055460_83055878_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106057	chr6	+	186	1	Intergenic	novelGene_382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGCTTATTTTATTTTG	NA	False	NA	NA	False	NA	NA	NA	83074150	83074336	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr6_+_83074200_83074300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106071	chr6	+	748	2	FSM	ENSMUSG00000030037.10	ENSMUST00000129656.2	710	2	-38	0	-38	0	multi-exon	FALSE	canonical	3	782	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATTTTTCTCAGGTTGT	7425	False	NA	NA	False	ATTAAA	-19	NA	83086062	83086920	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_83086185_83086294
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106131	chr6	+	1942	12	ISM	ENSMUSG00000068323.13	ENSMUST00000039212.8	5123	25	39984	1180	-34	288	3prime_fragment	FALSE	canonical	3	368	junction_2	56.2057907078168	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCCAGTGGTGGACTTA	5692	False	NA	19	True	AATAAA	-29	NA	83254340	83280746	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106136	chr6	+	1790	11	NIC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	0	284	combination_of_known_junctions	FALSE	canonical	3	81	junction_2	130.075362770972	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGTGGCCAGTGGTGGA	5726	False	NA	15	True	AATAAA	-25	NA	83254374	83280742	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_+_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106147	chr6	-	2103	8	FSM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	-18	0	-18	0	multi-exon	FALSE	canonical	3	2400	junction_5	123.349677166756	1863	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTGTCTCAGTCAGAC	NA	False	NA	2	True	AATAAA	-35	NA	83294606	83282672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83294410
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106177	chr6	+	2395	1	ISM	ENSMUSG00000043131.15	ENSMUST00000055261.11	4412	6	15286	80	14942	-79	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTTGAAGTGTGTTAAC	1025	False	NA	18	True	AATAAA	-19	NA	83318283	83320678	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_83318300_83320700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106189	chr6	+	254	1	NIC	ENSMUSG00000045160.15	novel	554	4	NA	NA	4830	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTGCCATGCTTCAGG	7378	False	NA	26	True	ATTAAA	-26	NA	83335124	83335378	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_+_83335100_83335400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106203	chr6	-	1104	8	NIC	ENSMUSG00000014554.14	novel	1107	7	NA	NA	2	0	combination_of_known_junctions	TRUE	canonical	3	8	junction_4	92.3157845746471	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGTTCGTTTATTTC	NA	False	NA	-3	True	AATAAA	-23	NA	83483887	83457198	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_83457419_83457824_83457925_83458328_83458445_83458759_83458821_83463965_83464114_83467402_83467591_83473667_83473781_83483729
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106221	chr6	-	1386	5	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5437	2	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_3	36.2724068680312	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTAGGCGGACTTTGCTT	2721	False	NA	-9	True	NA	NA	NA	83675088	83669785	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_83670449_83671329_83671456_83672566_83672939_83673961_83674051_83674952
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106224	chr6	-	1279	5	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5430	2	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_3	37.4799946638203	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTAGGCGGACTTTGCTT	2714	False	NA	-9	True	NA	NA	NA	83675095	83669785	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_83670449_83671329_83671456_83672566_83672825_83673961_83674051_83674952
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106233	chr6	+	1303	3	FSM	ENSMUSG00000034777.3	ENSMUST00000037807.3	1242	3	-61	0	-61	0	multi-exon	FALSE	canonical	3	115	junction_1	5	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTCTGTCCCTGTTCT	NA	False	NA	21	True	AATAAA	-32	NA	83688184	83715295	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_83688526_83710080_83710269_83714521
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106245	chr6	-	1658	1	Genic_Genomic	ENSMUSG00000014748.14	novel	NA	NA	NA	NA	1934	1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTGTAGTGTGTGACCA	NA	False	NA	-3	True	NA	NA	NA	83747523	83745865	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr6_-_83745900_83747500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106271	chr6	+	1189	10	FSM	ENSMUSG00000034744.14	ENSMUST00000113851.8	1323	10	136	-2	3	0	multi-exon	FALSE	canonical	3	32	junction_1	71.6054001687955	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTGTCATCTTCCATA	9440	False	NA	13	True	AATAAA	-21	NA	83772145	83779538	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_83772231_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106291	chr6	-	652	5	NNC	ENSMUSG00000045896.15	novel	649	4	NA	NA	0	-271	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.6229692545281	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCATTGTTTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	83808695	83785908	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_83786099_83786880_83787058_83791703_83791852_83808252_83808311_83808616
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106296	chr6	-	1142	2	Antisense	novelGene_ENSMUSG00000107991.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTTCAATTCTTACAG	NA	False	NA	NA	False	NA	NA	NA	83874346	83818630	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr6_-_83819326_83873899
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106308	chr6	-	1829	2	Genic_Genomic	ENSMUSG00000079501.4	novel	1002	1	NA	NA	-21984	195	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAGGTCTGAGATCATG	NA	False	NA	NA	False	AATAAA	-29	NA	83874346	83851165	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr6_-_83852548_83873899
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106314	chr6	-	1754	2	Genic_Genomic	ENSMUSG00000079501.4	novel	1002	1	NA	NA	-21984	191	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCCAAAGGTCTGAGAT	NA	False	NA	NA	False	AATAAA	-25	NA	83874346	83851169	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr6_-_83852477_83873899
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106340	chr6	+	914	1	FSM	ENSMUSG00000081669.2	ENSMUST00000119728.2	528	1	-8	-378	-8	378	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAGGCTTAATTACAAAC	NA	False	NA	NA	False	NA	NA	NA	85053165	85054079	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_85053200_85054100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106348	chr6	-	583	1	ISM	ENSMUSG00000033735.10	ENSMUST00000204757.3	3545	4	3506	3502	3496	0	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGTGTGCGTTGTCCTTC	NA	False	NA	NA	False	AATACA	-21	NA	85111242	85110659	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_85110700_85111200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106437	chr6	-	457	1	ISM	ENSMUSG00000057103.12	ENSMUST00000161198.4	1021	2	5077	0	4994	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAATGCATGTGATGGCT	NA	False	NA	NA	False	NA	NA	NA	85887592	85887135	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_85887100_85887600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106438	chr6	-	1021	2	FSM	ENSMUSG00000057103.12	ENSMUST00000161198.4	1021	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAATGCATGTGATGGCT	9864	False	NA	NA	False	NA	NA	NA	85892669	85887135	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_85888003_85892515
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106450	chr6	+	1322	5	NIC	ENSMUSG00000054226.14	novel	2103	6	NA	NA	-6	17	intron_retention	FALSE	canonical	3	153	junction_1	22.8842194535885	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTCTAAGCCAGGTGTG	3403	False	NA	NA	False	NA	NA	NA	85892713	85906024	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_+_85892773_85898404_85898494_85901341_85901505_85904222_85904967_85905757
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106496	chr6	+	488	3	NNC	ENSMUSG00000057497.9	novel	1643	3	NA	NA	26	138	at_least_one_novel_splicesite	FALSE	canonical	1	23	junction_2	920.5	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGGGACTGCGGGCAGGC	8643	False	NA	16	True	AATAAA	-17	NA	86342653	86345918	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_86342802_86343591_86343726_86345712
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106503	chr6	+	615	1	Genic_Genomic	ENSMUSG00000057497.9	novel	NA	NA	NA	NA	3725	5	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTATGGGTAGTGATATA	NA	False	NA	37	True	AATAAA	-21	NA	86346430	86347045	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr6_+_86346400_86347000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106524	chr6	+	436	3	NNC	ENSMUSG00000057278.9	novel	1055	4	NA	NA	-44	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1909	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTTTCTGCTGTTGTGG	NA	False	NA	28	True	AATAAA	-19	NA	86348479	86355888	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_86348597_86353456_86353602_86355714
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106547	chr6	+	480	3	NNC	ENSMUSG00000057278.9	novel	746	4	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1909	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTTTCTGCTGTTGTGG	NA	False	NA	28	True	AATAAA	-19	NA	86348528	86355888	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_86348710_86353476_86353602_86355714
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106578	chr6	+	906	3	ISM	ENSMUSG00000046679.17	ENSMUST00000050497.14	2534	10	0	24412	0	155	5prime_fragment	FALSE	canonical	3	15	junction_1	10	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCCCTGGTACAGAGAGT	1453	False	NA	NA	False	NA	NA	NA	86415355	86422958	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_86415470_86420708_86420958_86422415
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106602	chr6	-	438	2	NNC	ENSMUSG00000101655.2	novel	527	2	NA	NA	-8973	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGTGAAATTTTTTTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	86474182	86460357	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_86460682_86474068
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106683	chr6	-	244	1	ISM	ENSMUSG00000001157.14	ENSMUST00000001185.14	2949	14	41372	0	24882	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTCCTGTTTAAAGTGA	157	False	NA	-18	True	AATAAA	-20	NA	86668993	86668749	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_86668700_86669000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106686	chr6	-	300	1	ISM	ENSMUSG00000029994.18	ENSMUST00000113675.8	2030	12	28771	0	7918	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATTCTTTCTCTGATT	NA	False	NA	-1	True	ATTAAA	-19	NA	86714121	86713821	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_86713800_86714100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106693	chr6	-	805	7	ISM	ENSMUSG00000029994.18	ENSMUST00000001187.15	2002	13	54	15043	34	-4413	5prime_fragment	FALSE	canonical	3	152	junction_6	16.4054530229704	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTTTTAGATGTTT	4660	False	NA	NA	False	NA	NA	NA	86770512	86728865	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_86729215_86730784_86730876_86731834_86731949_86734800_86734896_86737655_86737744_86742743_86742790_86770490
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106706	chr6	+	1207	9	NIC	ENSMUSG00000029993.17	novel	1195	9	NA	NA	-13	2	combination_of_known_junctions	FALSE	canonical	3	210	junction_1	876.96265598941	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTCCTCTCACGAATT	NA	False	NA	27	True	AATAAA	-33	NA	86986204	87005445	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_+_86986372_86986731_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106763	chr6	+	171	1	Genic_Genomic	ENSMUSG00000029993.17	novel	NA	NA	NA	NA	3294	2	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTCCTCTCACGAATT	NA	False	NA	27	True	AATAAA	-33	NA	87005274	87005445	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr6_+_87005300_87005400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106769	chr6	+	1244	1	ISM	ENSMUSG00000029992.15	ENSMUST00000113658.8	6238	19	48108	0	14146	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGACTTTTTCTTTT	NA	False	NA	14	True	AATAAA	-15	NA	87067935	87069179	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_87067900_87069200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106778	chr6	-	1235	7	NNC	ENSMUSG00000089997.3	novel	3678	16	NA	NA	5	-36432	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.4803694888057	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTTGTCCATCGACCCA	NA	False	NA	NA	False	ATTAAA	-17	NA	87699778	87689006	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_87689260_87690283_87690357_87691104_87691249_87694858_87695064_87695769_87695958_87698819_87699089_87699675
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106793	chr6	-	1618	10	NNC	ENSMUSG00000030056.9	novel	5837	11	NA	NA	-20	3061	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	94.9422176450394	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGCCTAGAGCTTGT	NA	False	NA	NA	False	ATTAAA	-22	NA	87815758	87795428	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321_87799445_87802352_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87815621
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106807	chr6	-	1088	1	NIC	ENSMUSG00000030057.16	novel	2175	5	NA	NA	2158	10	mono-exon	FALSE	NA	NA	NA	NA	NA	1493	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGACTTTTCTTTCTAT	5377	False	NA	1	True	ATTAAA	-31	NA	87821141	87820053	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_87820100_87821100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106814	chr6	-	1673	5	NNC	ENSMUSG00000030057.16	novel	2175	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	625	junction_4	4057.45729336736	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACAGTTTGGACTTTTC	NA	False	NA	-6	True	ATTAAA	-24	NA	87828062	87820060	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637_87822764_87827885
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106818	chr6	-	1689	5	NNC	ENSMUSG00000030057.16	novel	2175	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4630.48644177909	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACAGTTTGGACTTTTC	NA	False	NA	-6	True	ATTAAA	-24	NA	87828062	87820060	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_87821139_87822103_87822303_87822442_87822540_87822637_87822776_87827885
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106864	chr6	+	1500	7	FSM	ENSMUSG00000030060.15	ENSMUST00000032141.14	1464	7	-16	-20	-16	20	multi-exon	FALSE	canonical	0	0	junction_5	428.702078630629	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGGTATTTGTTTTAA	2948	False	NA	64	True	NA	NA	NA	87890900	87913631	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_87890994_87891472_87891678_87894820_87894965_87898507_87898634_87902613_87902793_87910223_87910417_87913071
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106878	chr6	+	165	1	ISM	ENSMUSG00000030060.15	ENSMUST00000032141.14	1464	7	22515	15	3457	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGCTGGCAAGAGTTCT	NA	False	NA	29	True	AATAAA	-15	NA	87913431	87913596	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_87913400_87913600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106904	chr6	+	623	1	NIC	ENSMUSG00000030062.8	novel	3633	10	NA	NA	1791	597	mono-exon	FALSE	NA	NA	NA	NA	NA	643	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTCATGTAATTCTGAAG	4962	False	NA	34	True	AATAAA	-40	NA	88080343	88080966	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_+_88080300_88081000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106936	chr6	+	1675	11	FSM	ENSMUSG00000030079.16	ENSMUST00000032165.16	1675	11	-3	3	-3	-3	multi-exon	FALSE	canonical	3	1160	junction_1	83.5499850388975	1372	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTAGGTTTTTATATTT	NA	False	NA	28	True	AATAAA	-28	NA	88442387	88474551	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_88442651_88444547_88444635_88450058_88450192_88456108_88456261_88459099_88459190_88459944_88460095_88461389_88461454_88462694_88462894_88468497_88468601_88473389_88473482_88474209
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106975	chr6	-	701	2	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	7471	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGGTTCTGGTTTAA	NA	False	NA	-3	True	AATAAA	-16	NA	88861426	88860455	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_88861088_88861357
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106977	chr6	-	640	1	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	7802	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGGTTCTGGTTTAA	NA	False	NA	-3	True	AATAAA	-16	NA	88861095	88860455	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_88860500_88861100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000106998	chr6	-	942	4	NNC	ENSMUSG00000092247.3	novel	399	4	NA	NA	-3	8519	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0.471404520791032	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCATGCAGTTTCTTTC	NA	False	NA	NA	False	TATAAA	-24	NA	90209802	90200190	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_90200748_90201237_90201354_90202364_90202500_90209668
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107019	chr6	+	1438	6	ISM	ENSMUSG00000030089.16	ENSMUST00000032177.10	2324	10	16165	0	16165	0	3prime_fragment	FALSE	canonical	3	32	junction_4	8.27042925125413	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGTGTCCTCCATCCTTC	2817	False	NA	NA	False	AATAAA	-17	NA	90612293	90623394	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_90612379_90613838_90613984_90617865_90617946_90619192_90619328_90621066_90621216_90622550
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107097	chr6	+	885	3	FSM	ENSMUSG00000034083.17	ENSMUST00000138868.8	3980	3	15	3080	-4	1396	multi-exon	FALSE	canonical	3	200	junction_1	5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTCAGTTTAGAAAATGA	NA	False	NA	NA	False	AAAAAG	-8	NA	91855048	91858888	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_91855168_91857237_91857343_91858227
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107132	chr6	-	977	1	ISM	ENSMUSG00000014550.15	ENSMUST00000014694.11	5334	12	27229	8	6432	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGACTTGTGTGTGCT	NA	False	NA	-7	True	ATTAAA	-44	NA	92164677	92163700	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_92163700_92164700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107171	chr6	-	965	1	ISM	ENSMUSG00000061838.8	ENSMUST00000204224.3	3367	11	243690	1137	168899	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCCTCACAGTTCTTGT	NA	False	NA	-11	True	AATAAA	-18	NA	95452091	95451126	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_95451100_95452100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107187	chr6	-	2180	18	NNC	ENSMUSG00000030061.17	novel	2561	18	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	172.010340077059	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAAGTATATCAATAATA	NA	False	NA	-3	True	AATAAA	-28	NA	97182523	97160963	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182262_97182309_97182493
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107211	chr6	-	785	2	ISM	ENSMUSG00000044086.9	ENSMUST00000095655.4	2215	3	5147	-4	5147	4	3prime_fragment	FALSE	canonical	3	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGAGCCCCCTTTCATT	NA	False	NA	NA	False	AATAAA	-18	NA	97224573	97215490	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_97215833_97224130
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107224	chr6	-	831	1	FSM	ENSMUSG00000084319.4	ENSMUST00000121046.2	519	1	-108	-204	-108	204	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTTCAGAATCACACCC	NA	False	NA	-2	True	AATAAA	-23	NA	99855403	99854572	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_99854600_99855400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107232	chr6	-	163	1	ISM	ENSMUSG00000072872.4	ENSMUST00000101118.4	4503	5	55661	3097	1307	349	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGCAACGCTGGTGCT	NA	False	NA	NA	False	NA	NA	NA	100208785	100208622	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_100208600_100208800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107254	chr6	+	1370	1	FSM	ENSMUSG00000079224.6	ENSMUST00000121217.2	438	1	-40	-892	-40	892	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGACTATCAAAGACTT	NA	False	NA	NA	False	ATTAAA	-17	NA	100581603	100582973	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_100581600_100583000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107259	chr6	+	1756	1	FSM	ENSMUSG00000052144.9	ENSMUST00000203067.2	598	1	129	-1287	129	388	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGAGTACATTTTTATC	4060	False	NA	23	True	AATAAA	-17	NA	100843215	100844971	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_100843200_100845000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107265	chr6	+	2245	9	FSM	ENSMUSG00000013736.17	ENSMUST00000113248.4	1398	9	-27	-820	-2	0	multi-exon	FALSE	canonical	3	228	junction_1	232.818296907696	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTCGTTATTTCTGT	NA	False	NA	12	True	AATAAA	-21	NA	106746099	106759435	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_106746153_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107298	chr6	-	426	3	Intergenic	novelGene_383	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	1.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGGCTTCAGAGAAAACT	NA	False	NA	NA	False	AATAAA	-17	NA	108189888	108189216	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr6_-_108189402_108189566_108189735_108189815
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107312	chr6	-	790	5	NNC	ENSMUSG00000087341.5	novel	544	4	NA	NA	-9174	116	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	9.35414346693485	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGTCTTGTGTCAGTAG	NA	False	NA	-3	True	AATAAA	-18	NA	108600130	108587177	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_108587583_108589268_108589394_108590092_108590176_108590909_108590955_108599998
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107330	chr6	+	647	1	ISM	ENSMUSG00000030103.12	ENSMUST00000032194.11	3113	5	5504	146	3087	-146	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTCCTTGGTTTTAAAA	NA	False	NA	16	True	AATAAA	-28	NA	108643093	108643740	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_108643100_108643700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107338	chr6	+	1512	1	ISM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	39113	1555	27315	-1555	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTATCATGGTCCCCTC	4271	False	NA	16	True	AATAAA	-20	NA	108799172	108800684	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_108799200_108800700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107341	chr6	+	1129	7	ISM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	18016	3577	-1942	246	3prime_fragment	FALSE	canonical	3	304	junction_4	17.1269767715535	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAAGCTTCGTGGAGAGC	1312	False	NA	NA	False	AATAAA	-35	NA	108823650	108832732	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107358	chr6	+	1141	2	Intergenic	novelGene_384	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTTCTAGTGGCTTCCC	NA	False	NA	NA	False	NA	NA	NA	112679527	112681633	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr6_+_112679839_112680803
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107371	chr6	+	535	4	NNC	ENSMUSG00000030264.15	novel	1764	5	NA	NA	6	404	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_3	333.049545863675	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	113023281	113026907	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_113023352_113024375_113024666_113026299_113026378_113026810
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107410	chr6	+	1574	7	FSM	ENSMUSG00000030271.15	ENSMUST00000032406.15	1549	7	-21	-4	-21	4	multi-exon	FALSE	canonical	3	196	junction_2	21.4534379529249	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGAGTGAGAGGGGAGG	2287	False	NA	18	True	AATAAA	-27	NA	113303911	113311153	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107416	chr6	+	1371	6	NIC	ENSMUSG00000030271.15	novel	1549	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_4	90.4464482442511	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGTGAAGAGTGAGAGGG	2335	False	NA	14	True	AATAAA	-23	NA	113303959	113311149	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_+_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310591_113310642_113310802
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107417	chr6	+	1605	7	FSM	ENSMUSG00000030271.15	ENSMUST00000136263.4	1601	7	0	-4	0	0	multi-exon	FALSE	canonical	3	33	junction_2	81.0445693567572	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGTGAAGAGTGAGAGGG	2335	False	NA	14	True	AATAAA	-23	NA	113303959	113311149	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_113304324_113305325_113305574_113306106_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107455	chr6	-	1263	9	FSM	ENSMUSG00000051169.15	ENSMUST00000060634.14	1224	9	-29	-10	-8	0	multi-exon	FALSE	canonical	3	27	junction_2	50.3374549912885	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTACCAAGGACTGTG	NA	False	NA	-8	True	AATAAA	-42	NA	113396309	113392279	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_113392684_113393267_113393394_113393749_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107473	chr6	+	1203	2	FSM	ENSMUSG00000051256.11	ENSMUST00000204254.2	1147	2	-36	-20	5	0	multi-exon	FALSE	canonical	3	96	junction_1	0	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGTGTTGGAGATTTGAT	NA	False	NA	33	True	AATAAA	-37	NA	113419534	113425190	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_113419766_113424218
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107482	chr6	+	453	1	ISM	ENSMUSG00000030281.17	ENSMUST00000058300.14	2302	17	11261	0	6100	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTAGCACTCGTGTATC	848	False	NA	6	True	AATAAA	-21	NA	113459648	113460101	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_113459600_113460100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107487	chr6	+	2048	10	NNC	ENSMUSG00000030284.12	novel	2306	10	NA	NA	141	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	62.8439179610196	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCAGTCTTAACAACCCA	1724	False	NA	18	True	AATAAA	-24	NA	113460524	113470304	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_113461038_113461455_113461539_113465031_113465143_113465439_113465532_113466394_113466572_113466655_113466752_113468613_113468702_113468854_113468951_113469084_113469220_113469647
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107504	chr6	+	779	5	FSM	ENSMUSG00000034023.17	ENSMUST00000101051.5	2142	5	-22	1385	0	-502	multi-exon	FALSE	canonical	3	329	junction_3	30.62984655528	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTCTGCCTGTCTATA	NA	False	NA	NA	False	NA	NA	NA	113508642	113514295	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107583	chr6	-	1372	8	FSM	ENSMUSG00000030316.14	ENSMUST00000032461.12	1168	8	-18	-186	-18	186	multi-exon	FALSE	canonical	3	439	junction_6	13.6695699587494	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTATGGTTGATTT	NA	False	NA	NA	False	NA	NA	NA	115014855	114981155	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_114981481_114987767_114987831_114989118_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011911_115012095_115014610
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107586	chr6	-	833	7	NNC	ENSMUSG00000030316.14	novel	1168	8	NA	NA	-2302	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	166.976462080405	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCACTCTGACTGGCT	NA	False	NA	-34	True	AATAAA	-25	NA	115011528	114981341	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_114981481_114987767_114987831_114989118_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011453
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107636	chr6	+	2300	8	FSM	ENSMUSG00000000439.10	ENSMUST00000000449.9	6230	8	-8	3938	-8	-3938	multi-exon	FALSE	canonical	2	438	junction_3	36.5396066911353	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTATTCCTGGCTTTCTT	NA	False	NA	NA	False	AATAAA	-33	NA	115578854	115595647	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_115578975_115586541_115586671_115587479_115587662_115588595_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107656	chr6	-	723	3	ISM	ENSMUSG00000059900.15	ENSMUST00000127728.4	894	8	3839	-12	3839	0	3prime_fragment	FALSE	canonical	3	77	junction_1	0.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCGACTAAATATTCCTTTA	NA	False	NA	NA	False	AATAAA	-30	NA	115708073	115706091	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_115706646_115707396_115707460_115707967
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107762	chr6	+	816	2	Genic_Genomic	ENSMUSG00000101878.2	novel	387	1	NA	NA	-107	391	multi-exon	FALSE	canonical	3	128	junction_1	0	43	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACCAAAACACCAAATGCA	NA	False	NA	NA	False	AATAAA	-32	NA	116150590	116151475	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr6_+_116150893_116150961
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107777	chr6	-	2275	2	FSM	ENSMUSG00000059878.13	ENSMUST00000079749.6	3187	2	12	900	12	6	multi-exon	FALSE	canonical	3	68	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCTATTTTACTTCTGGG	NA	False	NA	1	True	AATAAA	-24	NA	116605948	116601876	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_116604095_116605891
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107781	chr6	+	1168	3	FSM	ENSMUSG00000059689.16	ENSMUST00000164472.8	1098	3	-62	-8	0	7	multi-exon	FALSE	canonical	3	26	junction_1	15	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCATAATTTCTTTATT	NA	False	NA	18	True	AATAAA	-25	NA	117818140	117822924	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_117818230_117820213_117820354_117821985
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107792	chr6	+	1240	3	NNC	ENSMUSG00000059689.16	novel	905	2	NA	NA	-624	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	27.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTATTTTTCATAATTT	NA	False	NA	11	True	AATAAA	-18	NA	117819589	117822917	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_117819758_117820213_117820354_117821985
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107794	chr6	+	505	3	ISM	ENSMUSG00000042097.18	ENSMUST00000134619.8	786	4	2	1261	2	-220	5prime_fragment	FALSE	canonical	3	15	junction_2	9.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGACCCATGGTCTTTAC	NA	False	NA	NA	False	AATAAA	-23	NA	117840039	117846439	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_117840104_117843355_117843536_117846178
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107812	chr6	+	2230	4	FSM	ENSMUSG00000042079.14	ENSMUST00000035493.14	2147	4	-74	-9	-69	6	multi-exon	TRUE	canonical	3	2150	junction_1	1335.10981654028	2045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTTATGTACTCAGCAAA	3660	False	NA	NA	False	AATAAA	-23	NA	117883681	117902589	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_117883801_117894430_117894560_117896059_117896121_117900668
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107823	chr6	+	2487	4	NIC	ENSMUSG00000042079.14	novel	391	5	NA	NA	1	1	intron_retention	FALSE	canonical	3	521	junction_1	2102.13325510592	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACAGCTTATGTACTCA	3767	False	NA	NA	False	AATAAA	-18	NA	117883788	117902584	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_+_117884170_117894430_117894560_117896059_117896121_117900668
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107852	chr6	-	546	8	NNC	ENSMUSG00000004988.10	novel	815	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5.74988908499946	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGGTCTTGTGACCC	2519	False	NA	NA	False	ATTAAA	-17	NA	117914296	117910519	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_117910710_117910804_117910843_117911275_117911313_117911386_117911462_117912099_117912149_117912814_117912884_117913698_117913742_117914251
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107853	chr6	-	553	9	FSM	ENSMUSG00000004988.10	ENSMUST00000204214.3	550	9	-2	-1	-2	0	multi-exon	FALSE	canonical	1	3	junction_3	4.92442890089805	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGGTCTTGTGACCC	2517	False	NA	NA	False	ATTAAA	-17	NA	117914298	117910519	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_117910710_117910804_117910843_117911275_117911313_117911386_117911462_117911969_117911994_117912115_117912149_117912814_117912881_117913698_117913742_117914251
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107861	chr6	-	543	8	NNC	ENSMUSG00000004988.10	novel	550	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6.0810847582265	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGGTCTTGTGACCC	2519	False	NA	NA	False	ATTAAA	-17	NA	117914296	117910519	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_117910710_117910804_117910843_117911275_117911313_117911386_117911462_117912099_117912149_117912814_117912881_117913698_117913742_117914251
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107901	chr6	+	224	1	Intergenic	novelGene_385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTATTAAAATAGATTAAA	NA	False	NA	NA	False	NA	NA	NA	120064235	120064459	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr6_+_120064200_120064500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107909	chr6	-	2506	12	FSM	ENSMUSG00000030177.15	ENSMUST00000112703.8	1887	12	95	-714	0	2	multi-exon	FALSE	canonical	3	197	junction_10	38.004349468349	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGCTCTACAAAGTCTC	NA	False	NA	-12	True	AATAAA	-20	NA	120334338	120301281	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327352_120330961_120331016_120334287
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107950	chr6	-	1287	10	NNC	ENSMUSG00000019210.11	novel	1312	9	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	409.922214843526	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTTGTTGTTCCTTATG	NA	False	NA	-3	True	ATTAAA	-19	NA	120799662	120772204	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_120772726_120773358_120773426_120774837_120774926_120778003_120778099_120780268_120780338_120781003_120781094_120784546_120784614_120785322_120785433_120795294_120795361_120799548
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107960	chr6	+	3119	7	FSM	ENSMUSG00000009112.5	ENSMUST00000009256.4	6925	7	-26	3832	0	-3832	multi-exon	FALSE	canonical	3	188	junction_2	15.192286054296	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGATGTTTTGAATGTC	NA	False	NA	17	True	AATAAA	-28	NA	120813172	120865971	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_120813319_120825416_120825578_120839815_120839924_120842528_120842686_120847726_120847797_120853163_120853308_120863638
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107970	chr6	-	2046	7	NIC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	-4	-265	combination_of_known_splicesites	FALSE	canonical	3	32	junction_5	439.124507780348	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGGAGAGCTGTATCT	NA	False	NA	-26	True	AATAAA	-16	NA	120893801	120870079	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120883389_120883525_120893694
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000107971	chr6	-	1848	6	NNC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	-17	-265	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_5	358.381137896514	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGGAGAGCTGTATCT	NA	False	NA	-26	True	AATAAA	-16	NA	120893831	120870079	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893787
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108011	chr6	+	571	2	ISM	ENSMUSG00000007458.15	ENSMUST00000123093.2	2976	6	-16	4169	-16	-4169	5prime_fragment	FALSE	canonical	3	1377	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCTGAGAGGGAAGAAACT	2927	False	NA	NA	False	NA	NA	NA	122285941	122289579	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_122286126_122289192
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108044	chr6	+	577	1	FSM	ENSMUSG00000055093.11	ENSMUST00000119780.2	471	1	-54	-52	-54	52	mono-exon	FALSE	NA	NA	NA	NA	NA	24374	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTCACAATGCAGGAACA	NA	False	NA	8	True	AATAAA	-34	NA	122433808	122434385	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_122433800_122434400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108047	chr6	+	506	2	Genic_Genomic	ENSMUSG00000055093.11	novel	471	1	NA	NA	-42	48	multi-exon	FALSE	canonical	2	52	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGCTTCACAATGCAGG	NA	False	NA	4	True	AATAAA	-30	NA	122433820	122434381	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr6_+_122433911_122433965
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108055	chr6	+	512	2	Genic_Genomic	ENSMUSG00000055093.11	novel	471	1	NA	NA	-42	49	multi-exon	FALSE	canonical	3	216	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGCTTCACAATGCAGGA	NA	False	NA	5	True	AATAAA	-31	NA	122433820	122434382	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr6_+_122434002_122434051
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108144	chr6	+	209	1	Intergenic	novelGene_386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGGAGAAGGACAAAA	NA	False	NA	NA	False	AGTAAA	-31	NA	122621531	122621740	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr6_+_122621500_122621700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108159	chr6	-	1011	2	Antisense	novelGene_ENSMUSG00000012396.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCCAACGGCTCAAGGCG	7474	False	NA	NA	False	NA	NA	NA	122691590	122684551	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr6_-_122684737_122690764
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108164	chr6	+	1226	3	NNC	ENSMUSG00000012396.13	novel	2211	4	NA	NA	25	0	intron_retention	FALSE	canonical	1	1	junction_2	2270.5	62	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTTATCTTTTGTCCA	NA	False	NA	18	True	AATAAA	-19	NA	122684551	122691592	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_122684893_122688496_122688557_122690767
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108166	chr6	+	2183	4	NNC	ENSMUSG00000012396.13	novel	2211	4	NA	NA	25	0	intron_retention	FALSE	canonical	3	354	junction_3	1978.73567938947	77	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTTATCTTTTGTCCA	NA	False	NA	18	True	AATAAA	-19	NA	122684551	122691592	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_122684893_122688496_122688763_122689587_122689675_122690103
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108184	chr6	-	3722	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3001.09703810103	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	8916	False	NA	-19	True	AATAAA	-14	NA	122719478	122704782	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712377_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108199	chr6	+	2424	8	NNC	ENSMUSG00000030327.9	novel	2476	8	NA	NA	-17	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	194.780357724032	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTCATCTTTTAGT	846	False	NA	11	True	ATTAAA	-17	NA	122851490	122865902	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_122851623_122857371_122857477_122857616_122857722_122858459_122858542_122859226_122859336_122859772_122859957_122863710_122863814_122864298
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108211	chr6	+	1335	1	Genic_Genomic	ENSMUSG00000030327.9	novel	NA	NA	NA	NA	13028	2	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTCATCTTTTAGT	NA	False	NA	11	True	ATTAAA	-17	NA	122864567	122865902	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr6_+_122864600_122865900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108230	chr6	+	145	1	Intergenic	novelGene_387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTGTGTTATTTGTTGA	NA	False	NA	14	True	NA	NA	NA	124451819	124451964	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr6_+_124451800_124452000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108232	chr6	+	422	2	NNC	ENSMUSG00000038527.10	novel	3010	6	NA	NA	15851	56435	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGATTCAGCAACCCACT	5397	False	NA	NA	False	NA	NA	NA	124485922	124544037	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_124486245_124543937
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108243	chr6	-	1098	6	FSM	ENSMUSG00000004268.12	ENSMUST00000004379.8	1034	6	-46	-18	-46	18	multi-exon	FALSE	canonical	3	1245	junction_5	105.298433036774	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTGAGGGTTCTTAAA	NA	False	NA	4	True	TATAAA	-37	NA	124689187	124681325	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_124681622_124681901_124682052_124682120_124682180_124682477_124682620_124682703_124682806_124688838
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108253	chr6	-	293	1	FSM	ENSMUSG00000004268.12	ENSMUST00000204334.2	4329	1	3753	283	999	13	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGTTTTGAGGGTTC	NA	False	NA	-1	True	TATAAA	-32	NA	124681623	124681330	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_124681300_124681600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108309	chr6	-	2170	16	FSM	ENSMUSG00000004266.16	ENSMUST00000112484.10	2219	16	39	10	-5	3	multi-exon	FALSE	canonical	3	99	junction_10	22.1017847444248	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCCTCCAAGTCTGTGC	8769	False	NA	-10	True	AATAAA	-18	NA	124710078	124697679	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_124697872_124698042_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124709908
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108313	chr6	-	782	3	FSM	ENSMUSG00000072772.4	ENSMUST00000004389.6	863	3	88	-7	88	7	multi-exon	FALSE	canonical	3	807	junction_1	71.5	5456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTCATTTGTAGTCCTG	9031	False	NA	NA	False	AATAAA	-24	NA	124718249	124716138	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_124716377_124717481_124717659_124717882
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108324	chr6	-	233	1	ISM	ENSMUSG00000072772.4	ENSMUST00000129823.2	510	2	1280	0	1280	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTCAGTCATTTGT	8219	False	NA	NA	False	AATAAA	-17	NA	124716378	124716145	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_124716100_124716400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108329	chr6	-	1699	4	ISM	ENSMUSG00000004263.16	ENSMUST00000088357.12	4433	10	10993	0	94	0	3prime_fragment	FALSE	canonical	3	86	junction_2	5.73488351136175	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTGTGACGTGTTTTT	9915	False	NA	0	True	AAAACA	-21	NA	124722494	124719506	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108331	chr6	-	577	4	ISM	ENSMUSG00000004263.16	ENSMUST00000088357.12	4433	10	191	6580	191	-1405	5prime_fragment	FALSE	canonical	3	30	junction_3	16.2138486760204	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGAGTGGTCCTGCC	9406	False	NA	NA	False	GATAAA	-17	NA	124733296	124726086	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_124726313_124726424_124726563_124726709_124726885_124733258
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108356	chr6	-	680	1	NIC	ENSMUSG00000023456.17	novel	1607	7	NA	NA	497	-118	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTTGTCATAATTCCTT	NA	False	NA	-2	True	AATAAA	-19	NA	124788352	124787672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_124787700_124788400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108373	chr6	-	1332	7	NNC	ENSMUSG00000023456.17	novel	1607	7	NA	NA	-2	-123	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_3	697.004224441207	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGGGTTGTCATAAT	NA	False	NA	-7	True	AATAAA	-14	NA	124791123	124787677	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_124788351_124788479_124788568_124788844_124788931_124789376_124789500_124789583_124789669_124789752_124789877_124790970
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108375	chr6	-	1776	6	NIC	ENSMUSG00000023456.17	novel	1607	7	NA	NA	0	-123	intron_retention	FALSE	canonical	3	1846	junction_4	37.5126645281297	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGGGTTGTCATAAT	NA	False	NA	-7	True	AATAAA	-14	NA	124791121	124787677	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_124788351_124788479_124788568_124788844_124789500_124789583_124789669_124789752_124789877_124790970
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108394	chr6	+	1131	7	NNC	ENSMUSG00000023505.14	novel	1976	6	NA	NA	-22	-227	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	434.945207277116	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACCGGGTCTTGTGTGTA	1322	False	NA	56	True	ATTAAA	-43	NA	124807157	124810268	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_124807237_124807326_124807381_124807465_124807614_124808324_124808456_124809108_124809403_124809528_124809633_124809947
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108423	chr6	+	302	1	NIC	ENSMUSG00000023505.14	novel	1976	6	NA	NA	2606	-250	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTTAAGAAGTTAGAGCAA	201	False	NA	33	True	ATTAAA	-20	NA	124809943	124810245	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_+_124809900_124810200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108446	chr6	-	898	5	NNC	ENSMUSG00000030122.13	novel	1149	5	NA	NA	-78	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_4	274.15232991897	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTCTCCTGCTTTCCCGC	NA	False	NA	-6	True	AATAAA	-26	NA	124892570	124890643	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_124891196_124891370_124891430_124891597_124891677_124891880_124891953_124892434
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108451	chr6	-	834	5	NNC	ENSMUSG00000030122.13	novel	1149	5	NA	NA	-86	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_4	271.262211706681	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTCTCCTGCTTTCCCGC	NA	False	NA	-6	True	AATAAA	-26	NA	124892578	124890643	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_124891196_124891370_124891430_124891597_124891677_124891880_124891953_124892506
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108473	chr6	+	1529	9	NNC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1310.37474959456	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGGCTGTACTTTTGC	NA	False	NA	31	True	AATAAA	-21	NA	124908348	124913112	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912413_124912585
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108475	chr6	+	1546	9	FSM	ENSMUSG00000030120.15	ENSMUST00000032214.14	1451	9	-90	-5	0	4	multi-exon	FALSE	canonical	3	152	junction_8	1260.71298651795	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGGCTGTACTTTTGC	NA	False	NA	31	True	AATAAA	-21	NA	124908348	124913112	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912564
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108516	chr6	-	583	2	Antisense	novelGene_ENSMUSG00000030120.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGATCTTCGGTCAGGCCC	6994	False	NA	NA	False	NA	NA	NA	124913112	124908378	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr6_-_124908579_124912729
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108600	chr6	+	1370	8	FSM	ENSMUSG00000030330.16	ENSMUST00000140131.8	1446	8	76	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	35.3345526679608	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTTTATTGTAG	7107	False	NA	8	True	AATAAA	-15	NA	125016798	125025965	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024441_125024551_125024755_125024904_125025138_125025201_125025330
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108602	chr6	+	1463	7	NIC	ENSMUSG00000030330.16	novel	1629	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_2	40.4533338826632	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGCGGTGATAGT	7107	False	NA	7	True	AATAAA	-17	NA	125016798	125026228	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_+_125016861_125020916_125020989_125024173_125024289_125024444_125024551_125024755_125024904_125025138_125025201_125025330
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108641	chr6	+	2630	16	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	-30	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	206.283558885983	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGTTGTGTTTTTTGA	5407	False	NA	25	True	AATATA	-17	NA	125108841	125121716	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114190_125114281_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108649	chr6	+	629	1	ISM	ENSMUSG00000038279.11	ENSMUST00000044200.11	2597	16	12216	0	12092	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGTTGTGTTTTTTGA	7111	False	NA	25	True	AATATA	-17	NA	125121087	125121716	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_125121100_125121700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108657	chr6	-	1339	6	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	0	2	intron_retention	FALSE	canonical	3	6089	junction_1	1950.20942465162	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTGGTTTTAATGCGG	NA	False	NA	-13	True	AATAAA	-17	NA	125142568	125138813	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_125139065_125139174_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125142514
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108664	chr6	-	1370	7	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	2	245	junction_5	3903.40606251629	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTTGGTTTTAATGCG	NA	False	NA	-14	True	AATAAA	-16	NA	125142568	125138814	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142117_125142275_125142514
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108665	chr6	-	1472	5	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	0	1	intron_retention	FALSE	canonical	3	6089	junction_1	1441.13000367767	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTTGGTTTTAATGCG	NA	False	NA	-14	True	AATAAA	-16	NA	125142568	125138814	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_125139065_125139174_125140004_125140101_125140400_125142233_125142275_125142514
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108666	chr6	-	1428	7	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	204	junction_5	3916.70276933715	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTTGGTTTTAATGCG	NA	False	NA	-14	True	AATAAA	-16	NA	125142568	125138814	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142059_125142275_125142514
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108669	chr6	-	1570	4	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	0	1	intron_retention	FALSE	canonical	3	6089	junction_1	1492.21602546906	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTTGGTTTTAATGCG	NA	False	NA	-14	True	AATAAA	-16	NA	125142568	125138814	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_125139065_125139174_125140400_125142233_125142275_125142514
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108709	chr6	+	451	2	ISM	ENSMUSG00000030335.7	ENSMUST00000136804.2	855	3	706	5	290	-5	3prime_fragment	FALSE	canonical	3	736	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGACGTCTGCCTCGTTC	NA	False	NA	44	True	GGGGCT	-43	NA	125169469	125170516	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_125169590_125170185
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108826	chr6	-	1207	11	NNC	ENSMUSG00000000399.11	novel	1445	11	NA	NA	0	42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	391.130873238102	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAAGTGTCTTTCTTGAC	NA	False	NA	-6	True	ATTAAA	-20	NA	126826088	126798916	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_126799153_126801898_126801966_126804502_126804599_126809434_126809512_126811391_126811460_126813181_126813285_126817460_126817603_126819083_126819176_126821270_126821369_126821753_126821925_126826031
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108829	chr6	-	1209	11	NNC	ENSMUSG00000000399.11	novel	1445	11	NA	NA	0	42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	386.064036139084	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAAGTGTCTTTCTTGAC	NA	False	NA	-6	True	ATTAAA	-20	NA	126826088	126798916	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_126799153_126801898_126801966_126804502_126804599_126809434_126809505_126811387_126811460_126813181_126813285_126817460_126817603_126819083_126819176_126821270_126821369_126821753_126821925_126826026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108857	chr6	-	237	1	NIC	ENSMUSG00000000399.11	novel	1445	11	NA	NA	26935	42	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAAGTGTCTTTCTTGAC	NA	False	NA	-6	True	ATTAAA	-20	NA	126799153	126798916	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_126798900_126799200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108870	chr6	-	355	1	ISM	ENSMUSG00000030346.17	ENSMUST00000112220.8	2233	9	15818	365	1966	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGCCTCGCCTAGTT	NA	False	NA	-5	True	AATAAA	-21	NA	126900732	126900377	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_126900400_126900700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108875	chr6	-	1883	9	FSM	ENSMUSG00000030346.17	ENSMUST00000112221.8	1871	9	-12	0	-12	0	multi-exon	FALSE	canonical	3	112	junction_4	48.7748334184751	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGCCTCGCCTAGTT	5253	False	NA	-5	True	AATAAA	-21	NA	126916562	126900377	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904654_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108878	chr6	+	2145	14	FSM	ENSMUSG00000030347.7	ENSMUST00000032497.7	2501	14	9	347	0	6	multi-exon	FALSE	canonical	3	74	junction_10	14.682034265643	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATGTGAAAATGTTTTT	NA	False	NA	NA	False	TATAAA	-1	NA	126916937	126952583	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_126916990_126919274_126919470_126921754_126921901_126923439_126923622_126927020_126927121_126927237_126927360_126931697_126931805_126932097_126932296_126932811_126932941_126938928_126939004_126943842_126944046_126950518_126950577_126951449_126951518_126952073
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108902	chr6	-	814	1	NIC	ENSMUSG00000038028.10	novel	3651	6	NA	NA	21246	390	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGCGTATTTGCAGTGAT	NA	False	NA	-31	True	AAGAAA	-18	NA	127065267	127064453	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_127064500_127065300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108911	chr6	-	241	1	ISM	ENSMUSG00000030350.9	ENSMUST00000032500.9	2724	10	80221	0	80221	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGAGTACCTCTTTCTT	NA	False	NA	2	True	AATAAA	-17	NA	127666214	127665973	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_127666000_127666200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108932	chr6	-	1527	3	FSM	ENSMUSG00000048668.17	ENSMUST00000112151.2	1108	3	-53	-366	-10	1	multi-exon	FALSE	canonical	3	139	junction_2	100.5	219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCTGTCTCAGTGGTCC	421	False	NA	NA	False	CATAAA	-35	NA	128339884	128333961	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_128335157_128336068_128336318_128339801
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108946	chr6	+	278	1	ISM	ENSMUSG00000001517.15	ENSMUST00000073316.13	4652	8	12649	253	4657	-253	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCCTGGAGGTGATTTA	NA	False	NA	15	True	TATAAA	-28	NA	128352578	128352856	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_128352600_128352900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108958	chr6	-	794	4	ISM	ENSMUSG00000001518.13	ENSMUST00000203026.2	655	6	-8	1973	-3	17	5prime_fragment	FALSE	canonical	3	279	junction_3	2.49443825784929	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGACCTCTAAGAATAGA	NA	False	NA	NA	False	NA	NA	NA	128401884	128392575	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_128393028_128393219_128393262_128394579_128394676_128401680
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000108972	chr6	-	220	1	NIC	ENSMUSG00000030357.11	novel	2678	9	NA	NA	6771	-560	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTGGATGATGGCTTT	5862	False	NA	NA	False	NA	NA	NA	128407845	128407625	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_128407600_128407800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109006	chr6	-	785	5	FSM	ENSMUSG00000030188.13	ENSMUST00000032307.12	767	5	-12	-6	-12	6	multi-exon	FALSE	canonical	2	356	junction_3	64.3059095262636	1783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAGGTATTTGCTTTTGC	NA	False	NA	NA	False	AATAAA	-22	NA	131270219	131261344	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_131261692_131262605_131262689_131264998_131265110_131266351_131266411_131270034
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109024	chr6	-	633	5	NNC	ENSMUSG00000030188.13	novel	767	5	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	196.271495638057	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTTACATGGTTTTTA	NA	False	NA	NA	False	TATAAA	-19	NA	131270194	131261475	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_131261692_131262601_131262689_131264998_131265110_131266351_131266411_131270034
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109037	chr6	-	1305	7	ISM	ENSMUSG00000030189.16	ENSMUST00000032309.13	1853	10	7502	0	-2434	0	3prime_fragment	FALSE	canonical	3	2076	junction_5	443.679595353824	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTGTAACTAGTGTGTA	9943	False	NA	-9	True	AATAAA	-21	NA	131357899	131341817	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131353144_131356320_131356444_131357838
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109059	chr6	+	197	1	Intergenic	novelGene_388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCAGAGCCCGGCAGTGG	NA	False	NA	NA	False	NA	NA	NA	134571184	134571381	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr6_+_134571200_134571400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109064	chr6	-	956	1	ISM	ENSMUSG00000030203.18	ENSMUST00000129433.4	3993	7	76047	5	9630	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTGAGACGTGGCT	NA	False	NA	-3	True	AATAAA	-24	NA	134693391	134692435	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_134692400_134693400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109126	chr6	+	1765	12	FSM	ENSMUSG00000030204.11	ENSMUST00000032326.11	1764	12	1	-2	1	2	multi-exon	TRUE	canonical	3	485	junction_5	30.2182146373304	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGTGTGCACTTT	6575	False	NA	22	True	ATTAAA	-22	NA	134988575	135000741	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134994201_134995013_134995161_134995936_134996075_134997578_134997650_134998411_134998542_135000241
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109137	chr6	+	487	1	ISM	ENSMUSG00000030204.11	ENSMUST00000032326.11	1764	12	11676	2	4288	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTCTGTGTGTGCA	NA	False	NA	18	True	ATTAAA	-18	NA	135000250	135000737	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_135000200_135000700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109178	chr6	+	2012	1	ISM	ENSMUSG00000030208.16	ENSMUST00000205156.3	2911	6	18617	0	13669	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGACTGTTTTCTT	NA	False	NA	7	True	TATAAA	-20	NA	135358159	135360171	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_135358200_135360200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109181	chr6	+	1549	2	FSM	ENSMUSG00000094973.3	ENSMUST00000204530.2	1573	2	0	24	0	-24	multi-exon	FALSE	canonical	3	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGGGAAAATTTTTTTAA	NA	False	NA	NA	False	ATTAAA	-17	NA	136304536	136306957	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_136304647_136305518
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109197	chr6	-	430	1	FSM	ENSMUSG00000096010.3	ENSMUST00000179285.3	2863	1	-6	2439	-6	-2439	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCAGAAAGGAGCTGTGG	401	False	NA	NA	False	NA	NA	NA	136781419	136780989	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_136781000_136781400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109242	chr6	+	946	4	FSM	ENSMUSG00000008540.12	ENSMUST00000008684.11	1167	4	221	0	9	0	multi-exon	FALSE	canonical	1	1	junction_1	1.24721912892465	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTTTTCTCTTT	2435	False	NA	NA	False	ATTAAA	-17	NA	138117534	138133753	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_138117605_138124656_138124814_138127765_138127861_138133129
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109259	chr6	-	613	1	ISM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	24329	770	816	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTTCTTTATTTCTTTC	NA	False	NA	-24	True	ATTAAA	-15	NA	142308484	142307871	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_142307900_142308500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109263	chr6	+	825	3	FSM	ENSMUSG00000030245.11	ENSMUST00000146508.2	367	3	-32	-426	0	426	multi-exon	FALSE	canonical	3	32	junction_1	306	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTGGAGCCAGATAAAA	NA	False	NA	75	True	AATAAA	-27	NA	142332946	142347862	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_142333096_142341913_142341996_142347268
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109279	chr6	-	1212	7	ISM	ENSMUSG00000030246.13	ENSMUST00000239397.2	1287	8	2384	-3	2246	0	3prime_fragment	FALSE	canonical	3	685	junction_1	55.897972533298	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTGCCTTTTTCTC	NA	False	NA	-4	True	AATAAA	-19	NA	142451285	142435974	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_142436331_142438218_142438343_142439825_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109337	chr6	-	1155	1	NIC	ENSMUSG00000030268.18	novel	7833	11	NA	NA	32536	5	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGATTTGAATCTTAAT	NA	False	NA	-19	True	AATAAA	-21	NA	144946033	144944878	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_144944900_144946000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109342	chr6	+	1368	9	ISM	ENSMUSG00000030263.14	ENSMUST00000132948.2	1761	17	15321	-6	3051	0	3prime_fragment	FALSE	canonical	3	39	junction_1	6.7256505261573	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTGGAACGCCTGGT	NA	False	NA	17	True	AATAAA	-22	NA	145106523	145120660	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109363	chr6	-	608	1	ISM	ENSMUSG00000030265.15	ENSMUST00000032399.12	4678	5	32929	4	8247	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTGTGTAATTATGTAG	NA	False	NA	-12	True	AATAAA	-18	NA	145163036	145162428	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_-_145162400_145163000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109366	chr6	-	1260	1	NIC	ENSMUSG00000030265.15	novel	4678	5	NA	NA	4830	512	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTCGCTTCAAGGTTGA	NA	False	NA	-1	True	AATAAA	-18	NA	145166453	145165193	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_145165200_145166500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109376	chr6	+	517	1	FSM	ENSMUSG00000067344.8	ENSMUST00000119876.2	378	1	-78	-61	-78	61	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGCTATTTCACTTTGA	813	False	NA	NA	False	AATAAA	-27	NA	145212047	145212564	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_145212000_145212600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109388	chr6	+	1507	5	NNC	ENSMUSG00000067338.7	novel	1775	5	NA	NA	260	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	537.231095525938	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATTTGCTTCCCTGTGTG	NA	False	NA	14	True	AATAAA	-34	NA	145561742	145567203	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_145561816_145563964_145564182_145564457_145564607_145564908_145565590_145566816
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109389	chr6	+	1517	5	NNC	ENSMUSG00000067338.7	novel	1775	5	NA	NA	260	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	528.729786847686	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATTTGCTTCCCTGTGTG	NA	False	NA	14	True	AATAAA	-34	NA	145561742	145567203	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_145561816_145563958_145564186_145564457_145564607_145564908_145565590_145566816
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109409	chr6	-	355	1	FSM	ENSMUSG00000040250.15	ENSMUST00000204234.2	1740	1	1394	-9	415	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCGGAGTGTTACTTTAG	8658	False	NA	-2	True	AATAAA	-26	NA	146451484	146451129	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_-_146451100_146451500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109423	chr6	+	1656	1	ISM	ENSMUSG00000040242.15	ENSMUST00000067404.13	2766	6	19683	1	9221	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTCTCAGGGTTAATT	NA	False	NA	28	True	AATAAA	-19	NA	146499039	146500695	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_146499000_146500700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109433	chr6	+	775	4	NNC	ENSMUSG00000030291.13	novel	814	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	144.342186025662	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTTTTTGTTTGTCCTT	NA	False	NA	36	True	AATAAA	-21	NA	146544076	146552100	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_146544151_146549669_146549778_146550647_146550749_146551608
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109436	chr6	+	647	3	FSM	ENSMUSG00000030291.13	ENSMUST00000125539.8	699	3	32	20	0	-20	multi-exon	FALSE	canonical	1	5	junction_1	124.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTGTTGTTTTGTGTA	NA	False	NA	16	True	AATAAA	-1	NA	146544076	146552080	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr6_+_146544151_146550647_146550749_146551608
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109450	chr6	+	1452	2	Fusion	ENSMUSG00000107788.2_ENSMUSG00000030291.13	novel	1713	3	NA	NA	0	51	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAATATAATGGTAATTGC	NA	False	NA	NA	False	AATAAA	-28	NA	146548657	146684823	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr6_+_146549159_146683872
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109473	chr6	+	1079	8	NNC	ENSMUSG00000040112.10	novel	4162	8	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	250.046689517729	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCTTACGTCAGGTGA	NA	False	NA	17	True	TATAAA	-19	NA	146944261	146972402	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_+_146944399_146947608_146947647_146949631_146949800_146951325_146951387_146957349_146957490_146961639_146961750_146962920_146962995_146972051
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109481	chr6	+	266	1	ISM	ENSMUSG00000040112.10	ENSMUST00000149660.2	4607	2	5939	1612	4108	-1612	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGTGTGTTGTTCCTCT	NA	False	NA	NA	False	AATAAA	-35	NA	146950200	146950466	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_146950200_146950500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109492	chr6	+	1039	1	NIC	ENSMUSG00000030301.18	novel	2459	13	NA	NA	100173	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTGTCATGTTTTTG	1626	False	NA	17	True	AATAAA	-18	NA	147533071	147534110	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_+_147533100_147534100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109524	chr6	+	835	2	Genic_Genomic	ENSMUSG00000063171.5	novel	943	1	NA	NA	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTTGCATATGTTTC	NA	False	NA	13	True	ATTAAA	-17	NA	148256153	148257096	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr6_+_148256583_148256690
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109525	chr6	+	853	2	Genic_Genomic	ENSMUSG00000063171.5	novel	943	1	NA	NA	0	0	multi-exon	FALSE	canonical	2	209	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTTGCATATGTTTC	NA	False	NA	13	True	ATTAAA	-17	NA	148256153	148257096	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr6_+_148256583_148256672
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109539	chr6	-	667	4	NIC	ENSMUSG00000030309.17	novel	598	4	NA	NA	-20	99	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	34.4705993887867	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTTTTTCTTCATTCTA	NA	False	NA	NA	False	AATAAA	-16	NA	148797680	148789069	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr6_-_148789289_148792106_148792170_148796434_148796655_148797515
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109541	chr6	-	671	4	NNC	ENSMUSG00000030309.17	novel	598	4	NA	NA	-20	99	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	35.873233599564	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTTTTTCTTCATTCTA	NA	False	NA	NA	False	AATAAA	-16	NA	148797680	148789069	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr6_-_148789293_148792106_148792170_148796434_148796655_148797515
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109602	chr6	+	1619	3	ISM	ENSMUSG00000032712.17	ENSMUST00000046689.13	6066	5	19886	5	3856	0	3prime_fragment	FALSE	canonical	3	234	junction_2	22	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTTAAGTCTTCATG	NA	False	NA	7	True	AATAAA	-19	NA	149230811	149237156	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr6_+_149231283_149232923_149233005_149236089
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109651	chr7	+	1976	1	ISM	ENSMUSG00000068566.14	ENSMUST00000203566.3	4027	3	6796	1087	4277	6	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCATGCTTTCTTTCTCT	7067	False	NA	20	True	AATATA	-14	NA	3345895	3347871	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_3345900_3347900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109669	chr7	+	549	4	FSM	ENSMUSG00000035674.14	ENSMUST00000076657.11	515	4	-36	2	-36	-2	multi-exon	FALSE	canonical	3	2080	junction_1	661.918591839074	7321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGGGAATCTGTTTATTG	219	False	NA	NA	False	AATAAA	-21	NA	3620335	3623324	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_3620407_3620615_3620691_3622428_3622507_3622999
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109695	chr7	+	792	4	FSM	ENSMUSG00000035674.14	ENSMUST00000150497.8	782	4	3	-13	-2	2	multi-exon	FALSE	canonical	3	7	junction_2	1418.73472581107	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTTTCGTGGGTTTC	265	False	NA	24	True	AATAAA	-26	NA	3620381	3623164	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_3620407_3620615_3621140_3622428_3622507_3622999
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109704	chr7	+	614	1	NIC	ENSMUSG00000035674.14	novel	515	4	NA	NA	-1	510	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	498	False	NA	NA	False	NA	NA	NA	3620614	3621228	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_3620600_3621200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109710	chr7	+	168	1	NIC	ENSMUSG00000035674.14	novel	515	4	NA	NA	2381	2	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTTTCGTGGGTTTC	2880	False	NA	24	True	AATAAA	-26	NA	3622996	3623164	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_3623000_3623200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109737	chr7	+	1855	14	NNC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	248.20923126509	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGGTGTGAGTGATTAT	2961	False	NA	14	True	ATTAAA	-22	NA	3633011	3644228	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637695_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109755	chr7	-	889	4	NNC	ENSMUSG00000078813.4	novel	2222	4	NA	NA	370	-960	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	75.4423989249782	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTTTACCAAAAAATGTC	9073	False	NA	NA	False	TATAAA	-35	NA	3668469	3664056	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_3664360_3665769_3666021_3666680_3666861_3668314
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109764	chr7	-	2341	8	FSM	ENSMUSG00000035596.15	ENSMUST00000038608.14	2878	8	537	0	0	0	multi-exon	FALSE	canonical	3	178	junction_4	25.6960252623964	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGTGAGTATAACTG	7930	False	NA	-2	True	AATAAA	-15	NA	3695985	3680787	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_3681849_3686807_3686985_3688672_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038_3695118_3695739
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109774	chr7	+	1398	5	NIC	ENSMUSG00000035585.17	novel	1319	4	NA	NA	82	-2	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	468.595241119668	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTATTTTGAGTCCTT	2321	False	NA	4	True	AATAAA	-14	NA	3696909	3704009	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_3697058_3697596_3697844_3697976_3698227_3698350_3698621_3703526
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109788	chr7	+	1423	5	ISM	ENSMUSG00000035585.17	ENSMUST00000205287.2	1375	6	783	-123	23	-2	3prime_fragment	FALSE	canonical	3	59	junction_4	570.385998688607	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTATTTTGAGTCCTT	2956	False	NA	4	True	AATAAA	-14	NA	3697544	3704009	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_3697844_3697976_3698227_3698350_3698621_3698711_3698833_3703526
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109811	chr7	+	746	5	NNC	ENSMUSG00000006333.15	novel	751	5	NA	NA	11	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6014.33381597663	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGCCTCTGTAGTGA	1275	False	NA	7	True	AATAAA	-22	NA	3707002	3709900	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_3707064_3707325_3707448_3707644_3707770_3708731_3708919_3709649
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109823	chr7	+	721	5	NNC	ENSMUSG00000006333.15	novel	751	5	NA	NA	-7	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6160.51598386856	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGCCTCTGTAGTGA	1302	False	NA	7	True	AATAAA	-22	NA	3707029	3709900	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_3707064_3707325_3707452_3707644_3707768_3708731_3708919_3709649
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109844	chr7	+	693	5	NNC	ENSMUSG00000006333.15	novel	751	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6399.09583456913	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	1307	False	NA	3	True	AATAAA	-18	NA	3707034	3709896	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_3707064_3707340_3707448_3707644_3707768_3708731_3708919_3709649
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109847	chr7	+	699	5	NNC	ENSMUSG00000006333.15	novel	751	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6006.00043706292	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	1307	False	NA	3	True	AATAAA	-18	NA	3707034	3709896	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_3707064_3707325_3707448_3707644_3707768_3708731_3708923_3709662
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109850	chr7	+	2600	2	ISM	ENSMUSG00000006333.15	ENSMUST00000108623.8	1347	5	-2	-2	-2	0	intron_retention	FALSE	canonical	3	8457	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	1307	False	NA	3	True	AATAAA	-18	NA	3707034	3709896	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_3707064_3707325
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109887	chr7	+	708	5	NNC	ENSMUSG00000006333.15	novel	751	5	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7330.83216200589	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGCCTCTGTAGTGA	1309	False	NA	7	True	AATAAA	-22	NA	3707036	3709900	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_3707060_3707325_3707448_3707644_3707770_3708731_3708919_3709649
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109919	chr7	+	972	4	FSM	ENSMUSG00000006333.15	ENSMUST00000108625.8	914	4	-14	-44	0	4	multi-exon	FALSE	canonical	3	14286	junction_1	337.374503416538	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGCCTCTGTAGTGA	1309	False	NA	7	True	AATAAA	-22	NA	3707036	3709900	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_3707448_3707644_3707768_3708731_3708919_3709649
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109946	chr7	+	944	6	NNC	ENSMUSG00000006333.15	novel	813	5	NA	NA	9	2	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	7091.97482793051	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGGTGTGCCTCTGTAGT	1332	False	NA	5	True	AATAAA	-20	NA	3707059	3709898	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_3707149_3707325_3707448_3707644_3707768_3708731_3708919_3709006_3709181_3709649
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000109980	chr7	-	447	1	ISM	ENSMUSG00000063838.7	ENSMUST00000076831.7	1025	3	13151	3	12733	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTGTCTATTCACTTTA	9991	False	NA	-2	True	CATAAA	-19	NA	4154708	4154261	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_4154300_4154700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110005	chr7	-	918	10	NNC	ENSMUSG00000064179.14	novel	934	14	NA	NA	0	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	19.6211022707948	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTCAGGGTTGTTATTA	9181	False	NA	-7	True	AATAAA	-23	NA	4518974	4507657	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_4507800_4510381_4510423_4510520_4510612_4511472_4511583_4512009_4512124_4512556_4512635_4512950_4513068_4513315_4513441_4517323_4517379_4518929
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110016	chr7	-	217	1	ISM	ENSMUSG00000055809.8	ENSMUST00000094897.5	2224	12	9304	0	9304	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGGTCTCCAGTGCCAAGA	6296	False	NA	1	True	AATAAA	-35	NA	4526148	4525931	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_4525900_4526100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110029	chr7	-	1572	8	FSM	ENSMUSG00000063802.6	ENSMUST00000079970.6	1593	8	35	-14	35	14	multi-exon	FALSE	canonical	3	115	junction_7	148.934720667842	259	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTGTTTTTTGGAAGGT	NA	False	NA	7	True	AATAAA	-30	NA	4688032	4663505	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687569_4687892
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110054	chr7	+	310	1	Genic_Genomic	ENSMUSG00000059851.16	novel	NA	NA	NA	NA	1400	3	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTTTTTTTTTTTTGA	7676	False	NA	19	True	ATTAAA	-20	NA	4750206	4750516	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_+_4750200_4750500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110083	chr7	-	594	3	FSM	ENSMUSG00000051811.15	ENSMUST00000182111.8	585	3	-7	-2	-7	2	multi-exon	FALSE	canonical	3	648	junction_1	77.5	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTTTTCTCGTTTT	NA	False	NA	-7	True	AATAAA	-19	NA	4756029	4754788	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_4754975_4755059_4755161_4755722
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110084	chr7	-	372	3	NIC	ENSMUSG00000051811.15	novel	490	4	NA	NA	-3	2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	322	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTTTTCTCGTTTT	NA	False	NA	-7	True	AATAAA	-19	NA	4756025	4754788	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_4754975_4755059_4755172_4755951
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110105	chr7	-	384	3	NIC	ENSMUSG00000051811.15	novel	553	4	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	396	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4756025	4754790	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_4754975_4755722_4755849_4755951
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110106	chr7	-	393	4	NNC	ENSMUSG00000051811.15	novel	553	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	339.005408019793	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4756025	4754790	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_4754975_4755059_4755161_4755722_4755757_4755951
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110108	chr7	-	360	3	NIC	ENSMUSG00000051811.15	novel	553	4	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_2	311	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4756026	4754790	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_4754975_4755059_4755161_4755951
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110116	chr7	-	545	3	ISM	ENSMUSG00000051811.15	ENSMUST00000182738.8	423	4	-17	-2	-3	0	intron_retention	FALSE	canonical	3	34	junction_1	384.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4756025	4754790	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_4754975_4755102_4755161_4755722
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110117	chr7	-	558	3	ISM	ENSMUSG00000051811.15	ENSMUST00000183971.8	401	4	-54	0	-3	0	intron_retention	FALSE	canonical	3	74	junction_1	364.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4756025	4754790	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_4754975_4755089_4755161_4755722
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110119	chr7	-	1004	3	NIC	ENSMUSG00000051811.15	novel	553	4	NA	NA	-3	0	intron_retention	FALSE	canonical	3	34	junction_1	384.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4756025	4754790	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_4754975_4755102_4755849_4755951
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110121	chr7	-	455	4	NNC	ENSMUSG00000051811.15	novel	553	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_3	337.616152852121	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4756025	4754790	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_4754975_4755059_4755161_4755722_4755819_4755951
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110136	chr7	-	511	4	NNC	ENSMUSG00000051811.15	novel	553	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	378.066425674407	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4756025	4754790	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_4755001_4755059_4755161_4755722_4755849_4755951
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110140	chr7	-	601	3	NIC	ENSMUSG00000051811.15	novel	553	4	NA	NA	-3	0	intron_retention	FALSE	canonical	3	33	junction_2	385	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4756025	4754790	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_4755161_4755722_4755880_4755951
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110150	chr7	+	1319	5	FSM	ENSMUSG00000030432.13	ENSMUST00000032597.12	1106	5	-29	-184	-29	184	multi-exon	FALSE	canonical	3	3938	junction_1	1160.31525888441	10844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGGACTCAGTGGCCAT	2664	False	NA	NA	False	AGTAAA	-18	NA	4795843	4798249	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_4795998_4796319_4796409_4796501_4796626_4797062_4797182_4797416
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110153	chr7	+	541	5	NNC	ENSMUSG00000030432.13	novel	1106	5	NA	NA	56	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2698.4830345029	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCTCATTGAGCT	2749	False	NA	17	True	AATAAA	-32	NA	4795928	4797561	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_4795998_4796319_4796409_4796501_4796626_4797062_4797177_4797416
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110179	chr7	+	510	5	NNC	ENSMUSG00000030432.13	novel	1106	5	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2737.82818808997	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCTCATTGAGCT	2782	False	NA	17	True	AATAAA	-32	NA	4795961	4797561	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_4795998_4796319_4796409_4796504_4796626_4797062_4797182_4797416
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110188	chr7	+	517	5	NNC	ENSMUSG00000030432.13	novel	1106	5	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2863.20786007583	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCTCATTGAGCT	2782	False	NA	17	True	AATAAA	-32	NA	4795961	4797561	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_4796002_4796319_4796409_4796501_4796626_4797062_4797182_4797416
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110191	chr7	+	825	4	NNC	ENSMUSG00000030432.13	novel	772	4	NA	NA	-27	0	intron_retention	FALSE	canonical	1	14	junction_1	3144.15864032901	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCTCATTGAGCT	2782	False	NA	17	True	AATAAA	-32	NA	4795961	4797561	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_4796399_4796501_4796626_4797062_4797182_4797416
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110193	chr7	+	839	4	NNC	ENSMUSG00000030432.13	novel	772	4	NA	NA	-27	0	intron_retention	FALSE	canonical	0	0	junction_3	3107.64802096734	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCTCATTGAGCT	2782	False	NA	17	True	AATAAA	-32	NA	4795961	4797561	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_4796409_4796501_4796626_4797062_4797186_4797416
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110194	chr7	+	1272	3	NIC	ENSMUSG00000030432.13	novel	772	4	NA	NA	-27	0	intron_retention	FALSE	canonical	3	6459	junction_1	95	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCTCATTGAGCT	2782	False	NA	17	True	AATAAA	-32	NA	4795961	4797561	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_4796409_4796501_4797182_4797416
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110195	chr7	+	830	4	NNC	ENSMUSG00000030432.13	novel	772	4	NA	NA	-27	0	intron_retention	FALSE	canonical	0	0	junction_3	3107.64802096734	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCTCATTGAGCT	2782	False	NA	17	True	AATAAA	-32	NA	4795961	4797561	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_4796409_4796501_4796626_4797062_4797177_4797416
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110196	chr7	+	830	4	NNC	ENSMUSG00000030432.13	novel	772	4	NA	NA	-27	0	intron_retention	FALSE	canonical	3	220	junction_2	2986.88358587267	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCTCATTGAGCT	2782	False	NA	17	True	AATAAA	-32	NA	4795961	4797561	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_4796409_4796501_4796626_4797067_4797182_4797416
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110245	chr7	+	150	1	ISM	ENSMUSG00000086784.3	ENSMUST00000125249.3	2244	6	18415	1256	18415	-1256	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTATTGCGTTTGTGGGGT	NA	False	NA	21	True	AGTAAA	-25	NA	4898566	4898716	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_4898600_4898700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110252	chr7	+	942	1	Genic_Genomic	ENSMUSG00000074406.6	novel	NA	NA	NA	NA	5845	1	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTTTTGTTTTCATGG	1190	False	NA	9	True	AATAAA	-15	NA	4924060	4925002	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_+_4924100_4925000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110260	chr7	-	625	1	Genic_Genomic	ENSMUSG00000061374.15	novel	NA	NA	NA	NA	5558	3	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGTTTTTTGATCCT	9830	False	NA	-1	True	AATAAA	-17	NA	5010679	5010054	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_-_5010100_5010700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110278	chr7	+	1054	2	FSM	ENSMUSG00000055633.7	ENSMUST00000069324.7	1096	2	42	0	42	0	multi-exon	FALSE	canonical	3	32	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGGTTCTTACTTGCA	2961	False	NA	4	True	AATAAA	-15	NA	5054578	5056722	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_5054714_5055803
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110305	chr7	-	848	1	Genic_Genomic	ENSMUSG00000046792.9	novel	NA	NA	NA	NA	10509	2	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGCCTGTTTCTTGAGT	NA	False	NA	1	True	AATAAA	-22	NA	6135335	6134487	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_-_6134500_6135300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110343	chr7	+	1974	6	FSM	ENSMUSG00000058028.15	ENSMUST00000072662.12	1980	6	0	6	0	-6	multi-exon	FALSE	canonical	2	4	junction_1	2.49799919935936	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATCTATTCATTGATTGA	3080	False	NA	NA	False	ATTAAA	-16	NA	6225276	6242416	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_6225336_6227584_6227759_6233070_6233538_6234335_6234537_6236813_6236968_6241497
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110368	chr7	+	278	1	NIC	ENSMUSG00000053367.16	novel	520	14	NA	NA	21048	2	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGATTCAGTGCGTATT	7135	False	NA	8	True	AATAAA	-23	NA	6284582	6284860	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_6284600_6284900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110399	chr7	+	1028	1	Intergenic	novelGene_389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTAGTCTGTTTGTGAT	NA	False	NA	NA	False	NA	NA	NA	6994149	6995177	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr7_+_6994100_6995200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110407	chr7	+	1119	8	NNC	ENSMUSG00000070837.7	novel	1401	7	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_1	154.398107210562	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGCTTGAGTGAGTT	2903	False	NA	20	True	ATTAAA	-21	NA	6998490	7006090	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_6998525_6998614_6998712_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110412	chr7	+	1263	7	NNC	ENSMUSG00000070837.7	novel	1401	7	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_1	167.377484215238	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGCTTGAGTGAGTT	2903	False	NA	20	True	ATTAAA	-21	NA	6998490	7006090	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_6998712_6999212_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110422	chr7	-	2058	5	FSM	ENSMUSG00000062116.11	ENSMUST00000056246.8	2042	5	-9	-7	-9	7	multi-exon	FALSE	canonical	3	51	junction_3	2.54950975679639	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTTGAGGTTTTCTGT	6227	False	NA	2	True	AATAAA	-28	NA	7124496	7117681	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_7119200_7119611_7119711_7120784_7120912_7122370_7122410_7124221
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110436	chr7	-	751	5	NNC	ENSMUSG00000109654.2	novel	643	5	NA	NA	11	3118	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.29128784747792	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTTATTAGGTATTTA	NA	False	NA	NA	False	AATAAA	-22	NA	7377612	7362778	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_7363020_7372685_7372773_7373537_7373664_7374809_7374849_7377354
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110462	chr7	+	1257	7	FSM	ENSMUSG00000030386.20	ENSMUST00000098822.10	4748	7	33	3458	21	-2776	multi-exon	FALSE	canonical	3	94	junction_4	11.513277359447	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCAGCCTGTATACCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	12212252	12226704	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12223496_12223624_12223875_12223972_12226283
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110492	chr7	+	728	6	NNC	ENSMUSG00000012848.16	novel	761	6	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	55	junction_3	6942.55032678914	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656237	12660613	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_12656316_12656899_12657009_12659318_12659529_12659675_12659793_12660322_12660422_12660498
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110501	chr7	+	739	6	NNC	ENSMUSG00000012848.16	novel	761	6	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7156.35154530575	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656242	12660613	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_12656316_12656899_12657009_12659318_12659529_12659663_12659797_12660322_12660422_12660498
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110510	chr7	+	719	6	NNC	ENSMUSG00000012848.16	novel	761	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6837.18021994448	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656244	12660613	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_12656302_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110516	chr7	+	738	6	NNC	ENSMUSG00000012848.16	novel	761	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6963.99639862055	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656244	12660613	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_12656316_12656899_12657009_12659318_12659534_12659663_12659793_12660322_12660422_12660498
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110517	chr7	+	737	6	NNC	ENSMUSG00000012848.16	novel	761	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7187.40591312332	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656244	12660613	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_12656316_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660426_12660498
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110518	chr7	+	723	6	NNC	ENSMUSG00000012848.16	novel	761	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6837.18021994448	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656244	12660613	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_12656316_12656909_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110522	chr7	+	810	5	ISM	ENSMUSG00000012848.16	ENSMUST00000004554.14	761	6	28	0	0	0	intron_retention	FALSE	canonical	3	15758	junction_4	1201.58239417861	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656244	12660613	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_12656316_12656899_12657009_12659318_12659529_12659663_12659793_12660322
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110523	chr7	+	711	6	NNC	ENSMUSG00000012848.16	novel	761	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7156.35154530575	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656244	12660613	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_12656316_12656899_12657009_12659318_12659529_12659663_12659793_12660344_12660422_12660498
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110524	chr7	+	1263	5	FSM	ENSMUSG00000012848.16	ENSMUST00000139349.3	1248	5	-13	-2	0	0	multi-exon	FALSE	canonical	3	14799	junction_4	1606.02496478106	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656244	12660613	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_12656316_12656899_12657009_12659318_12659529_12659663_12660422_12660498
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110531	chr7	+	716	6	NNC	ENSMUSG00000012848.16	novel	761	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6963.99639862055	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656244	12660613	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_12656316_12656899_12657009_12659318_12659524_12659675_12659793_12660322_12660422_12660498
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110536	chr7	+	726	6	NNC	ENSMUSG00000012848.16	novel	761	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7156.35154530575	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656244	12660613	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_12656316_12656899_12657009_12659318_12659529_12659663_12659808_12660344_12660422_12660498
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110542	chr7	+	715	6	NNC	ENSMUSG00000012848.16	novel	761	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6896.10961049779	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656244	12660613	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_12656316_12656899_12657009_12659336_12659529_12659663_12659793_12660322_12660422_12660498
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110545	chr7	+	700	6	NNC	ENSMUSG00000012848.16	novel	761	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6896.10961049779	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656244	12660613	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_12656316_12656899_12657009_12659351_12659529_12659663_12659793_12660322_12660422_12660498
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110564	chr7	+	865	6	FSM	ENSMUSG00000012848.16	ENSMUST00000137329.4	652	6	-119	-94	0	0	multi-exon	FALSE	canonical	3	632	junction_1	6589.62965271949	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656244	12660613	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_12656448_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110567	chr7	+	893	6	NIC	ENSMUSG00000012848.16	novel	778	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	6827.77253868346	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656244	12660613	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_12656476_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110611	chr7	-	193	1	ISM	ENSMUSG00000033916.6	ENSMUST00000210587.2	930	6	2449	0	2442	0	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGCTGTGAGCTTATGA	9540	False	NA	-7	True	AATAAA	-21	NA	12766129	12765936	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_12765900_12766100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110612	chr7	-	766	5	FSM	ENSMUSG00000033916.6	ENSMUST00000211344.2	606	5	-156	-4	7	0	multi-exon	FALSE	canonical	3	194	junction_3	1201.14705594278	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGCTGTGAGCTTATGA	6942	False	NA	-7	True	AATAAA	-21	NA	12768727	12765936	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12767755_12767970_12768561
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110645	chr7	-	908	6	NNC	ENSMUSG00000033916.6	novel	949	6	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1172.73366115244	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCAAGGCTGTGAGCTT	6980	False	NA	-11	True	AATAAA	-17	NA	12768689	12765940	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_12766130_12766215_12766278_12766361_12766493_12766568_12766749_12767755_12767970_12768557
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110651	chr7	-	899	6	NNC	ENSMUSG00000033916.6	novel	949	6	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1168.3445724614	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCAAGGCTGTGAGCTT	6989	False	NA	-11	True	AATAAA	-17	NA	12768680	12765940	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_12766130_12766215_12766278_12766361_12766493_12766564_12766749_12767755_12767970_12768561
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110674	chr7	-	461	1	ISM	ENSMUSG00000005575.17	ENSMUST00000165394.9	1228	7	2577	118	950	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTCTGCCTCTTCCTTC	6044	False	NA	-3	True	ATTAAA	-17	NA	12769625	12769164	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_12769200_12769600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110689	chr7	+	213	1	Genic_Genomic	ENSMUSG00000056394.21	novel	NA	NA	NA	NA	4028	2	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGAGGAGGTCTACATT	7118	False	NA	32	True	AATAAA	-20	NA	13045139	13045352	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_+_13045100_13045400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110709	chr7	+	982	5	FSM	ENSMUSG00000074365.14	ENSMUST00000098801.9	934	5	-29	-19	-29	19	multi-exon	FALSE	canonical	3	145	junction_3	373.339992500134	619	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGTCTTATTCCATAGCC	NA	False	NA	8	True	AATAAA	-43	NA	15630019	15637964	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_15630183_15631328_15631478_15632369_15632542_15636774_15636933_15637624
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110733	chr7	-	694	5	NNC	ENSMUSG00000041571.11	novel	736	6	NA	NA	28	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	883.163206887606	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGATGTTTATTTTGGCTT	NA	False	NA	-10	True	AATAAA	-22	NA	15656299	15651131	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_15651465_15653772_15653872_15653967_15654043_15654229_15654284_15656166
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110753	chr7	-	675	5	NNC	ENSMUSG00000041571.11	novel	736	6	NA	NA	50	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	883.163206887606	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGGGAGATGTTTATTT	NA	False	NA	-16	True	AATAAA	-16	NA	15656277	15651137	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_15651465_15653772_15653872_15653967_15654043_15654229_15654284_15656157
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110778	chr7	-	1519	13	NNC	ENSMUSG00000041560.13	novel	3176	13	NA	NA	-8	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	549.438267435225	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGGGTCTTGTTATTTT	NA	False	NA	-6	True	AATAAA	-15	NA	15679988	15671759	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674056_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679754
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110782	chr7	-	1521	13	NNC	ENSMUSG00000041560.13	novel	3176	13	NA	NA	7	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	542.235669089865	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGGGTCTTGTTATTTT	NA	False	NA	-6	True	AATAAA	-15	NA	15679992	15671759	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_15671815_15672094_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679754
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110804	chr7	+	2565	11	FSM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	-46	-2	-46	2	multi-exon	TRUE	canonical	3	1130	junction_8	65.9754499795189	667	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCACATCTCATTCATTC	NA	False	NA	4	True	AATAAA	-19	NA	15832336	15851902	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110833	chr7	-	1946	12	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	100	junction_1	37.3980155923805	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCCACTGTGTCCTTG	NA	False	NA	-5	True	AATAAA	-23	NA	16020705	16009392	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_16010036_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110838	chr7	+	1280	2	FSM	ENSMUSG00000002083.14	ENSMUST00000147267.2	881	2	109	-508	109	0	multi-exon	FALSE	canonical	3	237	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTTTTTGTTAGCTTTA	941	False	NA	26	True	AATAAA	-19	NA	16047550	16052130	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_16047743_16051042
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110863	chr7	-	1919	9	NNC	ENSMUSG00000052833.10	novel	1875	9	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1024.24837533432	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTGTCTCCTCTGTTT	NA	False	NA	-4	True	AATAAA	-17	NA	16121758	16060974	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_16061855_16064537_16064608_16070618_16070764_16092960_16093063_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110865	chr7	-	1891	9	NNC	ENSMUSG00000052833.10	novel	1875	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1018.26555966506	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTGTCTCCTCTGTTT	NA	False	NA	-4	True	AATAAA	-17	NA	16121731	16060974	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_16061855_16064537_16064608_16070623_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110869	chr7	-	1918	9	NNC	ENSMUSG00000052833.10	novel	1875	9	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1028.99968871472	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTGTCTCCTCTGTTT	NA	False	NA	-4	True	AATAAA	-17	NA	16121758	16060974	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_16061855_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102438_16102577_16104211_16104386_16112289_16112402_16121565
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110880	chr7	+	435	1	Intergenic	novelGene_390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCGATATCGATCTATGT	3884	False	NA	NA	False	NA	NA	NA	16134237	16134672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr7_+_16134200_16134700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110896	chr7	+	1156	2	Genic_Genomic	ENSMUSG00000108316.2	novel	115	1	NA	NA	-5	103470	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGTAGGGTTTCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	16350270	16453860	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_+_16350549_16452982
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110926	chr7	+	797	5	NNC	ENSMUSG00000008036.12	novel	836	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	258.845875957103	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTCTGAGCCCTCAT	NA	False	NA	19	True	AATAAA	-19	NA	16472367	16483219	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_16472464_16477143_16477294_16481185_16481294_16482613_16482674_16482836
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110954	chr7	-	1022	1	Genic_Genomic	ENSMUSG00000019370.11	novel	NA	NA	NA	NA	773	8	mono-exon	FALSE	NA	NA	NA	NA	NA	480	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCCGTCTGTCCTCAGC	7181	False	NA	-6	True	AATAAA	-23	NA	16650317	16649295	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_-_16649300_16650300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000110992	chr7	+	794	3	FSM	ENSMUSG00000030413.8	ENSMUST00000032573.8	694	3	-82	-18	-82	0	multi-exon	FALSE	canonical	3	241	junction_2	21	945	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGGTCACATGACCCTTC	NA	False	NA	24	True	AATAAA	-33	NA	18618522	18624384	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_18618899_18623202_18623325_18624088
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111050	chr7	+	873	4	ISM	ENSMUSG00000040811.16	ENSMUST00000048502.10	2275	19	21144	-3	20742	0	3prime_fragment	FALSE	canonical	3	145	junction_1	10.2306728354819	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAGTCTGGTCTATT	NA	False	NA	25	True	AATACA	-17	NA	18936272	18940407	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_18936522_18936901_18936998_18937826_18937958_18940010
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111054	chr7	+	287	1	ISM	ENSMUSG00000040811.16	ENSMUST00000120595.8	2255	19	25026	0	24590	0	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAGTCTGGTCTATT	NA	False	NA	25	True	AATACA	-17	NA	18940120	18940407	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_18940100_18940400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111059	chr7	-	2261	13	FSM	ENSMUSG00000030403.10	ENSMUST00000032561.9	2215	13	-45	-1	-45	1	multi-exon	TRUE	canonical	3	1236	junction_9	117.461666323765	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCTGGAGTACTTTAAAT	NA	False	NA	NA	False	AATAAA	-25	NA	19005787	18990852	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111067	chr7	-	2224	13	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	243	junction_7	341.113250988583	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGAGTACTTTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	19005754	18990853	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994604_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111068	chr7	-	1781	11	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	142	junction_8	402.203443545676	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGAGTACTTTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	19005747	18990853	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994796_18998450_18998496_18998578_18998751_19005438
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111091	chr7	+	1063	10	NNC	ENSMUSG00000003549.10	novel	1375	10	NA	NA	-14	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	117.195942288498	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCTCTGCGTGTTT	1020	False	NA	15	True	AATAAA	-20	NA	19079011	19090449	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19084190_19084617_19084715_19086553_19086631_19088250_19088351_19089025_19089098_19089217_19089287_19090343
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111110	chr7	+	606	1	Intergenic	novelGene_391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTTTTG	981	False	NA	NA	False	AGTAAA	-16	NA	19093957	19094563	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr7_+_19094000_19094600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111117	chr7	-	823	1	ISM	ENSMUSG00000030397.12	ENSMUST00000239292.2	3966	18	32897	327	2528	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACGTACAGAGTCCGTCT	9821	False	NA	-3	True	NA	NA	NA	19159849	19159026	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_19159000_19159800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111154	chr7	+	781	6	NNC	ENSMUSG00000002043.18	novel	785	6	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	205.854317418897	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCAGTGCTTATCACA	518	False	NA	21	True	AGTAAA	-22	NA	19242647	19250070	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_19242758_19248125_19248194_19248346_19248465_19248931_19249023_19249128_19249223_19249770
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111165	chr7	+	1168	4	NIC	ENSMUSG00000002043.18	novel	719	5	NA	NA	2	0	intron_retention	FALSE	canonical	3	104	junction_1	221.490406112771	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCAGTGCTTATCACA	523	False	NA	21	True	AGTAAA	-22	NA	19242652	19250070	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_19242758_19248346_19249016_19249128_19249223_19249770
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111185	chr7	+	298	1	ISM	ENSMUSG00000002043.18	ENSMUST00000147114.2	719	5	7136	2	1426	2	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGTGCAGTGCTTATCA	7641	False	NA	19	True	AGTAAA	-20	NA	19249770	19250068	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_19249800_19250100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111188	chr7	-	493	1	ISM	ENSMUSG00000051403.10	ENSMUST00000209190.2	1792	4	1690	0	511	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGCCTCTGTTTCCTGC	7516	False	NA	-6	True	AATAAA	-15	NA	19265217	19264724	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_19264700_19265200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111200	chr7	-	735	1	Genic_Genomic	ENSMUSG00000044709.7	novel	NA	NA	NA	NA	7289	1	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGTGTGTGTGT	7816	False	NA	-5	True	AATAAA	-23	NA	19299604	19298869	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_-_19298900_19299600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111204	chr7	-	814	2	NNC	ENSMUSG00000044709.7	novel	1023	3	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	0	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCTGTGTGTGTGTGTG	2892	False	NA	-6	True	AATAAA	-22	NA	19307320	19298870	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_19299598_19307233
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111227	chr7	-	474	7	NNC	ENSMUSG00000061028.8	novel	4545	20	NA	NA	13	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	96.4722182231179	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATGCTGTCCCCTTATT	8198	False	NA	-4	True	AATAAA	-26	NA	19319051	19314962	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_19315084_19316130_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111231	chr7	-	470	7	NNC	ENSMUSG00000061028.8	novel	4545	20	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.4722182231179	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATGCTGTCCCCTTATT	8198	False	NA	-4	True	AATAAA	-26	NA	19319051	19314962	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_19315102_19316152_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111232	chr7	-	474	7	NNC	ENSMUSG00000061028.8	novel	4545	20	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	114.266866005271	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATGCTGTCCCCTTATT	8198	False	NA	-4	True	AATAAA	-26	NA	19319051	19314962	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_19315102_19316152_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318704_19318749_19319014
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111243	chr7	-	1027	12	ISM	ENSMUSG00000061028.8	ENSMUST00000208068.2	2151	21	0	5830	0	-1650	5prime_fragment	FALSE	canonical	3	190	junction_11	26.2344798668527	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCGCGAGGAAAAAATCAC	NA	False	NA	NA	False	NA	NA	NA	19338386	19320797	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111262	chr7	-	539	3	FSM	ENSMUSG00000040564.15	ENSMUST00000108451.4	532	3	-3	-4	-3	4	multi-exon	FALSE	canonical	3	1274	junction_1	0.5	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGAAGTGCTTTGGACTG	NA	False	NA	0	True	AATAAA	-23	NA	19426566	19423401	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_19423562_19425812_19425961_19426335
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111263	chr7	-	473	4	FSM	ENSMUSG00000040564.15	ENSMUST00000045035.12	432	4	-37	-4	-37	4	multi-exon	FALSE	canonical	3	965	junction_3	145.90027035235	2294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGAAGTGCTTTGGACTG	NA	False	NA	0	True	AATAAA	-23	NA	19426622	19423401	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_19423562_19425812_19425961_19426335_19426412_19426533
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111282	chr7	-	493	3	NNC	ENSMUSG00000040564.15	novel	532	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	637	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGAAGTGCTTTGG	NA	False	NA	-4	True	AATAAA	-19	NA	19426530	19423405	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_19423562_19425812_19425955_19426335
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111308	chr7	-	1421	4	FSM	ENSMUSG00000002985.17	ENSMUST00000174064.9	1408	4	-144	131	-144	27	multi-exon	FALSE	canonical	3	8700	junction_3	835.854984764436	10974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGCCTCAGTTTATTGT	NA	False	NA	2	True	NA	NA	NA	19433257	19430164	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_19431029_19431403_19431573_19432112_19432179_19432935
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111310	chr7	-	863	1	FSM	ENSMUSG00000002985.17	ENSMUST00000207525.2	897	1	528	-494	528	26	mono-exon	FALSE	NA	NA	NA	NA	NA	7648	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGCCTCAGTTTATTG	NA	False	NA	1	True	AATAAA	-45	NA	19431028	19430165	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_19430200_19431000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111327	chr7	-	1218	4	NNC	ENSMUSG00000002985.17	novel	1104	4	NA	NA	0	2	intron_retention	FALSE	canonical	3	62	junction_3	4907.01948459778	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGTCTCTGTGAGTGA	NA	False	NA	-28	True	AATAAA	-16	NA	19432933	19430194	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_19431029_19431403_19431573_19432112_19432179_19432784
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111332	chr7	-	1104	4	NNC	ENSMUSG00000002985.17	novel	1408	4	NA	NA	-2	2	intron_retention	FALSE	canonical	0	0	junction_2	4591.02363313455	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGTCTCTGTGAGTGA	NA	False	NA	-28	True	AATAAA	-16	NA	19432979	19430194	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_19431029_19431403_19431564_19432112_19432179_19432935
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111374	chr7	-	484	1	NIC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	330	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTCCTACCGCCAGGTT	NA	False	NA	-12	True	AATAAA	-19	NA	19490546	19490062	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_19490100_19490500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111385	chr7	-	412	1	ISM	ENSMUSG00000053175.18	ENSMUST00000135609.8	755	3	790	0	790	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGCTTTCCATCTGTT	NA	False	NA	-8	True	AATAAA	-17	NA	19542798	19542386	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_19542400_19542800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111390	chr7	+	469	2	NNC	ENSMUSG00000087593.2	novel	402	2	NA	NA	661	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATGAGCATGAAGGAATGA	NA	False	NA	NA	False	AATAAA	-21	NA	19551138	19552543	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_19551434_19552369
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111400	chr7	-	2861	8	FSM	ENSMUSG00000040511.15	ENSMUST00000043517.8	2905	8	44	0	-3	0	multi-exon	FALSE	canonical	3	90	junction_4	10.2359909243845	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTGTCCGAGCCTTTG	9975	False	NA	-1	True	NA	NA	NA	19655041	19637502	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_19639118_19639703_19639739_19643105_19643229_19644529_19644682_19648662_19648790_19650798_19651096_19652486_19652835_19654877
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111404	chr7	+	466	2	NNC	ENSMUSG00000090075.2	novel	338	2	NA	NA	-75	156	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTGCCTTAATTTTTC	NA	False	NA	NA	False	AATAAA	-37	NA	19654578	19661688	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_19654715_19661358
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111413	chr7	-	636	1	FSM	ENSMUSG00000066724.4	ENSMUST00000086013.4	645	1	-1	10	-1	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGTATTAATAAGAAAAAAA	NA	False	NA	NA	False	AATAAA	-3	NA	23646716	23646080	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_23646100_23646700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111418	chr7	+	888	3	ISM	ENSMUSG00000047603.10	ENSMUST00000205680.2	1332	5	-28	3389	-1	641	5prime_fragment	TRUE	canonical	3	44	junction_2	1	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGTGTGCATTTTAGT	NA	False	NA	NA	False	AATAAA	-29	NA	23833592	23836980	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_23833913_23834682_23834741_23836470
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111435	chr7	-	1014	1	ISM	ENSMUSG00000050605.18	ENSMUST00000077780.14	2480	7	7617	6	3490	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTATCATGTGGATTCTT	NA	False	NA	1	True	TATAAA	-17	NA	23991483	23990469	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_23990500_23991500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111453	chr7	+	427	1	ISM	ENSMUSG00000002210.12	ENSMUST00000002280.11	2242	14	22733	0	2157	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGTTTGTTCTTTCTC	9403	False	NA	19	True	AATAAA	-19	NA	24121776	24122203	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_24121800_24122200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111457	chr7	+	814	1	Genic_Genomic	ENSMUSG00000054793.9	novel	NA	NA	NA	NA	3767	2	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGTGGCTGTGTGTCTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	24203152	24203966	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_+_24203200_24204000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111486	chr7	+	184	1	Intergenic	novelGene_392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGATTGCTTGTTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	24239640	24239824	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr7_+_24239600_24239800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111489	chr7	+	2117	17	FSM	ENSMUSG00000051768.10	ENSMUST00000063249.9	2155	17	40	-2	-8	0	multi-exon	FALSE	canonical	3	337	junction_4	31.1527862919194	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTCTCTCTTAGGAGAC	NA	False	NA	9	True	AATAAA	-21	NA	24246614	24272865	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111493	chr7	+	178	1	ISM	ENSMUSG00000051768.10	ENSMUST00000063249.9	2155	17	26109	2	1033	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACGGTTTCTCTCTTAGG	2249	False	NA	5	True	AATAAA	-17	NA	24272683	24272861	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_24272700_24272900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111495	chr7	+	991	7	ISM	ENSMUSG00000064254.7	ENSMUST00000077191.7	1484	8	6312	0	6312	0	3prime_fragment	FALSE	canonical	3	79	junction_1	14.7384606462894	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGAGTTCTGCTTGCTTTC	NA	False	NA	9	True	AATAAA	-24	NA	24293279	24308350	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_24293437_24293842_24293988_24294424_24294574_24305629_24305760_24307292_24307383_24307776_24307894_24308147
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111499	chr7	+	349	2	ISM	ENSMUSG00000064254.7	ENSMUST00000077191.7	1484	8	20780	0	20780	0	3prime_fragment	FALSE	canonical	3	101	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGAGTTCTGCTTGCTTTC	NA	False	NA	9	True	AATAAA	-24	NA	24307747	24308350	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_24307894_24308147
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111512	chr7	+	1217	6	NNC	ENSMUSG00000054169.8	novel	1048	4	NA	NA	-5532	0	at_least_one_novel_splicesite	TRUE	canonical	2	9	junction_1	8.73155198117723	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGCTCCTTCGACTCTA	794	False	NA	NA	False	AATAAA	-25	NA	24471098	24484081	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_24471221_24473674_24473740_24474864_24474981_24477550_24477911_24480294_24480655_24483887
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111560	chr7	+	529	5	NNC	ENSMUSG00000040952.17	novel	774	6	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11299.3558444718	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584012	24589231	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_24584093_24584560_24584632_24584876_24584978_24587706_24587918_24589165
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111588	chr7	+	583	7	NNC	ENSMUSG00000040952.17	novel	593	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	8918.45340509715	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584057	24589231	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_24584093_24584560_24584632_24584876_24584978_24585531_24585603_24587706_24587891_24588331_24588387_24589165
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111594	chr7	+	1291	5	FSM	ENSMUSG00000040952.17	ENSMUST00000108428.8	1284	5	-3	-4	0	0	multi-exon	FALSE	canonical	3	12982	junction_1	6509.68167424491	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584057	24589231	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_24584093_24584560_24584632_24584876_24584978_24587706_24587891_24588331
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111595	chr7	+	328	5	NIC	ENSMUSG00000040952.17	novel	593	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	18	junction_3	9228.47518553309	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584057	24589231	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_24584093_24584560_24584632_24584876_24584978_24588331_24588387_24589165
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111596	chr7	+	586	7	NNC	ENSMUSG00000040952.17	novel	593	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	9651.48875677852	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584057	24589231	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_24584093_24584560_24584632_24584876_24584978_24585531_24585613_24587706_24587891_24588331_24588387_24589172
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111597	chr7	+	490	6	NNC	ENSMUSG00000040952.17	novel	593	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	141	junction_4	10548.0956006286	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584057	24589231	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_24584093_24584560_24584632_24584876_24584978_24587706_24587891_24588353_24588387_24589165
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111599	chr7	+	495	6	NNC	ENSMUSG00000040952.17	novel	593	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9287.73704623468	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584057	24589231	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_24584093_24584560_24584632_24584893_24584978_24587706_24587891_24588331_24588387_24589165
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111600	chr7	+	506	6	NNC	ENSMUSG00000040952.17	novel	593	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9287.73704623468	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584057	24589231	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_24584093_24584560_24584636_24584886_24584978_24587706_24587891_24588331_24588387_24589165
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111601	chr7	+	569	7	NNC	ENSMUSG00000040952.17	novel	593	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	8918.45340509715	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584057	24589231	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_24584093_24584560_24584632_24584876_24584978_24585531_24585589_24587706_24587891_24588331_24588387_24589165
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111603	chr7	+	559	6	NNC	ENSMUSG00000040952.17	novel	593	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	8395.36849935725	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584057	24589231	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_24584093_24584560_24584632_24584876_24584978_24587659_24587891_24588331_24588387_24589165
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111608	chr7	+	502	6	NNC	ENSMUSG00000040952.17	novel	593	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	10588.4769707451	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584057	24589231	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_24584093_24584560_24584632_24584876_24584978_24587706_24587891_24588341_24588387_24589165
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111609	chr7	+	498	6	NNC	ENSMUSG00000040952.17	novel	593	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	10116.3226638932	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584057	24589231	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_24584093_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588394_24589186
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111615	chr7	+	502	6	NNC	ENSMUSG00000040952.17	novel	593	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9287.73704623468	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584057	24589231	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_24584093_24584560_24584632_24584886_24584978_24587706_24587891_24588331_24588387_24589165
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111654	chr7	+	595	6	FSM	ENSMUSG00000040952.17	ENSMUST00000108429.8	633	6	43	-5	43	5	multi-exon	FALSE	canonical	3	279	junction_1	10447.7852504729	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGATCTGGTTTTGGTT	NA	False	NA	31	True	AATAAA	-21	NA	24584181	24589236	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_24584295_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111669	chr7	+	746	5	ISM	ENSMUSG00000040952.17	ENSMUST00000108430.10	774	6	496	0	-50	0	3prime_fragment	FALSE	canonical	3	8873	junction_4	7833.34750840916	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584291	24589231	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111679	chr7	+	1038	5	FSM	ENSMUSG00000003379.8	ENSMUST00000003469.8	1457	5	80	339	80	-339	multi-exon	FALSE	canonical	0	0	junction_2	1.4790199457749	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTGGCAGGAGTCATGG	2978	False	NA	NA	False	AATAAA	-15	NA	24596885	24601283	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_24597014_24598519_24598814_24599011_24599131_24600657_24600727_24600855
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111685	chr7	+	580	3	ISM	ENSMUSG00000040940.19	ENSMUST00000117419.8	3214	29	21414	0	2458	0	3prime_fragment	FALSE	canonical	3	357	junction_1	12	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGAGGGCG	NA	False	NA	34	True	AATATA	-16	NA	24625245	24626017	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_24625373_24625448_24625549_24625664
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111700	chr7	-	817	5	NNC	ENSMUSG00000003380.12	novel	899	5	NA	NA	-37	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	321.680256621385	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCCAATACTTTCCTGG	4574	False	NA	-12	True	AATAAA	-17	NA	24672100	24669183	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_24669435_24669511_24669614_24671185_24671284_24671522_24671740_24671951
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111766	chr7	+	1441	6	NNC	ENSMUSG00000057229.12	novel	1465	6	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	48.006666203768	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGGCCTTTCCTCCCA	1758	False	NA	39	True	NA	NA	NA	25318857	25324976	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_25318886_25320320_25320518_25321768_25321845_25323223_25323364_25323451_25323615_25324139
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111782	chr7	+	1008	6	NNC	ENSMUSG00000061286.8	novel	1020	6	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	507.530255255783	42	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGTGTCTGGAGAGTAC	NA	False	NA	31	True	ATTAAA	-43	NA	25358597	25367457	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_25358809_25362561_25362676_25363751_25363874_25364845_25364987_25365680_25365768_25367124
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111841	chr7	-	716	3	NIC	ENSMUSG00000058709.12	novel	2107	6	NA	NA	490	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_2	272	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGTATTCCTCTCTG	NA	False	NA	-3	True	AATAAA	-20	NA	26859806	26858082	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_26858637_26858948_26859017_26859712
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111842	chr7	-	1243	6	NNC	ENSMUSG00000058709.12	novel	2107	6	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_4	214.357085257287	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGTATTCCTCTCTG	NA	False	NA	-3	True	AATAAA	-20	NA	26866186	26858082	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864867_26865154_26866108
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000111859	chr7	-	384	1	NIC	ENSMUSG00000053291.16	novel	1192	8	NA	NA	5652	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGGCCTCTGTCATTCTG	NA	False	NA	-1	True	CATAAA	-19	NA	26868232	26867848	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_26867800_26868200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112006	chr7	+	1188	2	NNC	ENSMUSG00000008384.9	novel	1233	2	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTTCTTTGCAT	6632	False	NA	12	True	ATTAAA	-22	NA	27186377	27189741	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_27186502_27188677
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112010	chr7	+	1087	2	NNC	ENSMUSG00000008384.9	novel	1233	2	NA	NA	227	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTTCTTTGCAT	6816	False	NA	12	True	ATTAAA	-22	NA	27186561	27189741	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_27186585_27188677
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112037	chr7	+	543	1	ISM	ENSMUSG00000049643.16	ENSMUST00000067386.14	2701	10	28324	0	7090	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTCTGTGTATGT	NA	False	NA	NA	False	AATAAA	-20	NA	27280981	27281524	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_27281000_27281500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112070	chr7	+	487	5	NNC	ENSMUSG00000057093.15	novel	1947	4	NA	NA	229	-1578	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	22.5554871372799	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTACTTTTAGTGATGG	NA	False	NA	12	True	AGTAAA	-16	NA	27391566	27401914	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_27391665_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112124	chr7	-	667	5	NNC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	4063	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1024.07919005319	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTTAGGTGTTTAAC	NA	False	NA	-4	True	AATAAA	-24	NA	27742384	27741131	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742145_27742226
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112129	chr7	-	891	3	ISM	ENSMUSG00000030603.17	ENSMUST00000138512.8	854	5	4063	-9	4063	0	intron_retention	FALSE	canonical	3	2373	junction_1	43	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTTAGGTGTTTAAC	NA	False	NA	-4	True	AATAAA	-24	NA	27742384	27741131	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_27741346_27741525_27741582_27741763
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112141	chr7	-	664	5	NNC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	4063	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1024.07919005319	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTTAGGTGTTTAAC	NA	False	NA	-4	True	AATAAA	-24	NA	27742384	27741131	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742145_27742229
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112153	chr7	-	216	1	NIC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	5100	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTTAGGTGTTTAAC	NA	False	NA	-4	True	AATAAA	-24	NA	27741347	27741131	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_27741100_27741300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112175	chr7	+	1242	9	FSM	ENSMUSG00000046865.8	ENSMUST00000042405.8	1197	9	-35	-10	-35	10	multi-exon	FALSE	canonical	3	2081	junction_3	279.620725269069	2900	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCCTATTGCTAAGTGGC	8496	False	NA	10	True	ATTAAA	-24	NA	27869099	27878704	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_27869244_27873928_27874112_27874209_27874318_27874408_27874504_27875279_27875451_27876567_27876701_27877629_27877743_27878322_27878469_27878555
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112265	chr7	+	601	5	NNC	ENSMUSG00000037563.16	novel	1109	5	NA	NA	44	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8855.79201356378	144	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGTGTTGGTCTCTT	NA	False	NA	2	True	AATAAA	-23	NA	28050120	28052123	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_28050277_28050423_28050519_28051601_28051699_28051787_28051836_28051918
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112266	chr7	+	592	4	NNC	ENSMUSG00000037563.16	novel	628	4	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10005.3047374325	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	0	True	AATAAA	-21	NA	28050120	28052121	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_28050277_28050416_28050519_28051601_28051699_28051884
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112302	chr7	+	1808	2	ISM	ENSMUSG00000037563.16	ENSMUST00000152918.8	628	4	-14	0	-14	0	intron_retention	FALSE	canonical	3	20881	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	0	True	AATAAA	-21	NA	28050173	28052121	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_28050277_28050416
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112303	chr7	+	624	5	NNC	ENSMUSG00000037563.16	novel	1109	5	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8741.0029458867	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	0	True	AATAAA	-21	NA	28050173	28052121	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_28050277_28050416_28050590_28051601_28051699_28051787_28051836_28051918
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112318	chr7	+	1948	1	FSM	ENSMUSG00000077711.3	ENSMUST00000104523.3	125	1	-759	-1064	-759	1064	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	0	True	AATAAA	-21	NA	28050173	28052121	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_28050200_28052100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112321	chr7	+	724	3	ISM	ENSMUSG00000037563.16	ENSMUST00000152918.8	628	4	-13	0	-13	0	intron_retention	FALSE	canonical	3	20881	junction_1	335.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	0	True	AATAAA	-21	NA	28050174	28052121	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_28050277_28050416_28050519_28051601
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112322	chr7	+	605	6	NNC	ENSMUSG00000037563.16	novel	1109	5	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9882.49528408691	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	0	True	AATAAA	-21	NA	28050174	28052121	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_28050277_28050416_28050519_28050811_28050865_28051601_28051699_28051787_28051836_28051918
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112350	chr7	-	1794	2	FSM	ENSMUSG00000044786.7	ENSMUST00000051241.7	2790	2	997	-1	-1	1	multi-exon	FALSE	canonical	3	36	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAAATTTGTCTTTTTCG	6670	False	NA	-1	True	AATAAA	-19	NA	28078681	28076207	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_28077919_28078598
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112358	chr7	-	666	4	NNC	ENSMUSG00000003444.9	novel	1281	4	NA	NA	34	-585	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	257.469739322249	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCCTGTTGCTGATTTGT	NA	False	NA	-14	True	AATGAA	-24	NA	28092099	28086155	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_28086450_28090236_28090322_28090510_28090574_28091875
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112371	chr7	+	1989	14	NNC	ENSMUSG00000003437.15	novel	2003	14	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	54.1138401179189	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTCCTAAAGTCTCTGT	584	False	NA	17	True	AATAAA	-18	NA	28092390	28098810	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095817_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112406	chr7	+	653	7	FSM	ENSMUSG00000060791.16	ENSMUST00000078845.13	637	7	10	-26	10	19	multi-exon	FALSE	canonical	3	32	junction_1	149.1011029097	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGAGCCTCTTTGTTGGTG	156	False	NA	NA	False	AATAAA	-45	NA	28140361	28145990	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_28140467_28140858_28140956_28141093_28141144_28142644_28142695_28144277_28144361_28145341_28145416_28145796
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112415	chr7	+	992	2	FSM	ENSMUSG00000099417.2	ENSMUST00000190841.2	971	2	0	-21	0	21	multi-exon	FALSE	canonical	3	6	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTCCATCCAGGTTTAT	4392	False	NA	NA	False	AATAAA	-29	NA	28191974	28197159	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_28192135_28196327
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112421	chr7	-	549	1	ISM	ENSMUSG00000030602.14	ENSMUST00000108283.8	2899	10	38818	0	8870	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATGTGTGTGGT	721	False	NA	-3	True	ATTAAA	-21	NA	28258792	28258243	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_28258200_28258800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112465	chr7	-	601	1	Genic_Genomic	ENSMUSG00000045948.9	novel	NA	NA	NA	NA	-173	1	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGTGCGGTGTCTGTCC	3224	False	NA	-4	True	AATAAA	-25	NA	28439665	28439064	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_-_28439100_28439700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112479	chr7	-	702	3	NNC	ENSMUSG00000045948.9	novel	722	3	NA	NA	12	0	intron_retention	FALSE	canonical	3	20	junction_2	459.5	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGTGCGGTGTCTGTC	1656	False	NA	-5	True	AATAAA	-24	NA	28441233	28439065	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_28439665_28440911_28440980_28441198
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112485	chr7	-	939	3	NNC	ENSMUSG00000045948.9	novel	883	2	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_2	7	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGTGCGGTGTCTGTC	1694	False	NA	-5	True	AATAAA	-24	NA	28441195	28439065	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_28439665_28440139_28440196_28440911
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112487	chr7	-	673	2	NIC	ENSMUSG00000045948.9	novel	722	3	NA	NA	-18	0	intron_retention	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGTGCGGTGTCTGTC	1626	False	NA	-5	True	AATAAA	-24	NA	28441263	28439065	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_28439665_28441189
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112496	chr7	-	734	3	NNC	ENSMUSG00000045948.9	novel	722	3	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_2	469.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGTGCGGTGTCTGTC	1697	False	NA	-5	True	AATAAA	-24	NA	28441192	28439065	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_28439665_28440911_28440980_28441125
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112525	chr7	-	173	1	NIC	ENSMUSG00000030595.16	novel	2061	7	NA	NA	7310	0	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCTTCCTGCTTATTT	NA	False	NA	1	True	AATAAA	-33	NA	28458629	28458456	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_28458500_28458600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112569	chr7	-	1738	6	ISM	ENSMUSG00000054808.16	ENSMUST00000144909.8	2581	14	9506	-405	314	0	3prime_fragment	FALSE	canonical	3	1402	junction_2	86.8456101366097	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTCATCTTCTCCC	854	False	NA	-1	True	AATAAA	-24	NA	28597304	28592672	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112629	chr7	+	410	4	ISM	ENSMUSG00000037337.12	ENSMUST00000208227.2	2720	32	19554	-3	62	0	3prime_fragment	FALSE	canonical	2	9	junction_3	76.2408464451089	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCGGAGGAGAGATTTTT	7024	False	NA	23	True	AATAAA	-28	NA	28701028	28702704	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_28701095_28701173_28701264_28701344_28701416_28702521
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112636	chr7	+	515	2	NNC	ENSMUSG00000109017.2	novel	698	3	NA	NA	-4884	-185	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTGTGATACCACTG	6710	False	NA	NA	False	AATAAA	-23	NA	28723563	28729490	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_28723778_28729189
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112650	chr7	-	245	1	ISM	ENSMUSG00000030590.16	ENSMUST00000164589.9	1293	8	3480	0	2849	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATCTTGTTTCTGTTAG	NA	False	NA	-1	True	AATAAA	-21	NA	28852179	28851934	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_28851900_28852200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112653	chr7	-	1195	7	NIC	ENSMUSG00000030590.16	novel	1293	8	NA	NA	0	0	intron_retention	TRUE	canonical	3	18	junction_6	105.086868827651	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATCTTGTTTCTGTTAG	NA	False	NA	-1	True	AATAAA	-21	NA	28855608	28851934	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28854783_28855099_28855235_28855455
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112721	chr7	-	1006	6	NNC	ENSMUSG00000074227.13	novel	1211	6	NA	NA	225	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	398.697679953119	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTTTTGTTTTTG	694	False	NA	0	True	AATAAA	-37	NA	28981110	28955749	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_28956263_28957592_28957632_28957847_28958014_28958823_28958878_28959795_28959856_28980936
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112773	chr7	+	635	1	ISM	ENSMUSG00000099689.7	ENSMUST00000187028.7	3208	4	7956	0	7662	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCATAATTTTCTTTATG	NA	False	NA	33	True	AATAAA	-30	NA	29615603	29616238	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_29615600_29616200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112795	chr7	-	743	1	FSM	ENSMUSG00000098022.8	ENSMUST00000183025.2	3276	1	988	1545	988	2	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCCACTGTGTCCCAG	NA	False	NA	NA	False	ATTAAA	-18	NA	29756201	29755458	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_29755500_29756200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112831	chr7	+	468	4	FSM	ENSMUSG00000074218.4	ENSMUST00000208441.2	485	4	-28	45	22	3	multi-exon	FALSE	canonical	3	51	junction_1	502.814964861716	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCCAGCCTGTGTGTCTC	5696	False	NA	27	True	AATAAA	-28	NA	29883590	29885458	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_29883765_29884509_29884597_29884699_29884785_29885336
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112845	chr7	+	120	1	NIC	ENSMUSG00000074218.4	novel	393	4	NA	NA	1717	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTCCAGCCTGTGTGT	7441	False	NA	24	True	AATAAA	-25	NA	29885335	29885455	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_29885300_29885500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112862	chr7	-	1731	10	FSM	ENSMUSG00000001794.14	ENSMUST00000129761.8	1157	10	-33	-541	-33	0	multi-exon	FALSE	canonical	3	18	junction_9	497.427331996628	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTAACTTGGTTATTTT	NA	False	NA	-8	True	NA	NA	NA	29893239	29886366	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29892671
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112883	chr7	+	192	1	Intergenic	novelGene_393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTCCCAGAAACAGAG	NA	False	NA	NA	False	NA	NA	NA	29906036	29906228	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr7_+_29906000_29906200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112910	chr7	-	879	6	NNC	ENSMUSG00000006095.13	novel	1416	6	NA	NA	758	-1	at_least_one_novel_splicesite	FALSE	canonical	2	33	junction_5	340.493759120487	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCAAGTCTCTTGATTC	NA	False	NA	-6	True	NA	NA	NA	29930939	29923556	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_29923773_29923897_29923971_29926268_29926461_29927028_29927126_29930550_29930695_29930782
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112974	chr7	+	429	6	NNC	ENSMUSG00000019738.16	novel	819	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	479.221618877947	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGTTTCCCGTGTTTAT	NA	False	NA	15	True	AATAAA	-15	NA	29931755	29932812	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_29931830_29931906_29931962_29932174_29932249_29932335_29932407_29932491_29932544_29932709
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000112992	chr7	+	959	7	FSM	ENSMUSG00000042831.14	ENSMUST00000060834.12	982	7	29	-6	29	6	multi-exon	FALSE	canonical	3	231	junction_5	88.8144132446981	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATTTTTTTTTTTTTAA	NA	False	NA	15	True	AATAAA	-22	NA	30008170	30013735	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30012015_30012133_30013343
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113005	chr7	+	926	7	NNC	ENSMUSG00000042831.14	novel	982	7	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	179.58694891952	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTGGATTTTTTTTT	NA	False	NA	9	True	AATAAA	-16	NA	30008190	30013729	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_30008253_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30012015_30012133_30013343
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113025	chr7	+	967	2	NNC	ENSMUSG00000006649.18	novel	1987	2	NA	NA	-148172	-1538	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCCAGTTAATTTTTA	NA	False	NA	NA	False	NA	NA	NA	30009567	30184603	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_30009974_30184042
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113050	chr7	-	605	1	FSM	ENSMUSG00000074211.5	ENSMUST00000098586.5	2490	1	1882	3	1882	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCTTGTTGATTCTTTTA	NA	False	NA	2	True	AATAAA	-33	NA	30021438	30020833	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_30020800_30021400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113058	chr7	-	1330	9	ISM	ENSMUSG00000006651.9	ENSMUST00000208792.2	2472	16	5067	-8	10	2	3prime_fragment	FALSE	canonical	3	360	junction_6	42.8711732986164	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTTTCTGTTGGAGA	NA	False	NA	0	True	AATAAA	-22	NA	30139847	30134404	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30135469_30135603_30135628_30136211_30136320_30137602_30137703_30139359_30139489_30139568
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113061	chr7	-	984	5	NNC	ENSMUSG00000006651.9	novel	2472	16	NA	NA	-46	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	210.36218766689	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTTTCTGTTGGAGA	NA	False	NA	0	True	AATAAA	-22	NA	30136474	30134404	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30135500_30136211
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113083	chr7	+	541	2	NNC	ENSMUSG00000006649.18	novel	1987	2	NA	NA	-5973	-1536	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCCAGTTAATTTTTATA	NA	False	NA	NA	False	NA	NA	NA	30151766	30184605	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_30151783_30184080
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113086	chr7	+	545	2	NNC	ENSMUSG00000006649.18	novel	1987	2	NA	NA	-5973	-1537	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCCAGTTAATTTTTAT	NA	False	NA	NA	False	NA	NA	NA	30151766	30184604	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_30151788_30184080
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113100	chr7	-	417	2	Genic_Genomic	ENSMUSG00000109509.2	novel	397	1	NA	NA	-81	41	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTGGAATTCAACTTTC	9554	False	NA	0	True	AATAAA	-41	NA	30184603	30184084	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_-_30184189_30184290
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113109	chr7	+	2096	3	FSM	ENSMUSG00000036854.15_ENSMUSG00000106236.3	ENSMUST00000044048.8	1363	3	-733	0	11	0	multi-exon	FALSE	canonical	3	14	junction_1	10.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTATGTCTGGGCCAG	NA	False	NA	12	True	AATAAA	-20	NA	30251959	30254868	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_30252958_30253686_30253810_30253893
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113132	chr7	-	698	4	FSM	ENSMUSG00000036835.8	ENSMUST00000208628.2	488	4	-61	-149	-61	0	multi-exon	FALSE	canonical	3	17	junction_3	378.867611002401	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGTTCTTGGGATCTT	843	False	NA	-5	True	AATAAA	-17	NA	30263113	30261289	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_30261560_30261748_30261854_30262220_30262364_30262933
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113153	chr7	+	827	8	FSM	ENSMUSG00000078765.12	ENSMUST00000163330.3	583	8	-5	-239	1	0	multi-exon	FALSE	canonical	3	25	junction_1	197.894529732277	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTGGTTTCCTTCCAC	NA	False	NA	35	True	AATAAA	-23	NA	30262726	30264789	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_30262775_30262981_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113160	chr7	+	806	7	FSM	ENSMUSG00000078765.12	ENSMUST00000163654.8	781	7	-20	-5	-2	2	multi-exon	FALSE	canonical	3	54	junction_6	203.636454387606	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTTTCCTTCCACCCC	NA	False	NA	38	True	AATAAA	-26	NA	30262729	30264792	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264519
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113161	chr7	+	874	8	NIC	ENSMUSG00000078765.12	novel	884	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_1	181.681713163321	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTGGTTTCCTTCCAC	NA	False	NA	35	True	AATAAA	-23	NA	30262729	30264789	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_30262825_30262981_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113199	chr7	+	997	7	FSM	ENSMUSG00000078765.12	ENSMUST00000165773.8	874	7	-3	-120	0	0	multi-exon	FALSE	canonical	3	472	junction_4	66.6524984944717	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTGGTTTCCTTCCAC	NA	False	NA	35	True	AATAAA	-23	NA	30262763	30264789	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113231	chr7	-	1775	6	FSM	ENSMUSG00000006310.11	ENSMUST00000108151.3	1775	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	31.6771210813104	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGTCCAGACTTTTCC	NA	False	NA	0	True	AATAAA	-20	NA	30292367	30289105	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_30289633_30289780_30289946_30290057_30290127_30290220_30290295_30290481_30291391_30292336
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113261	chr7	-	505	4	NNC	ENSMUSG00000036751.8	novel	618	4	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2842.01806233998	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTGTGTATTACACAGC	NA	False	NA	-1	True	AATAAA	-21	NA	30325576	30316395	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_30316581_30322835_30322941_30323924_30324039_30325475
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113270	chr7	-	376	3	FSM	ENSMUSG00000036751.8	ENSMUST00000208838.2	354	3	-19	-3	18	3	multi-exon	FALSE	canonical	1	31	junction_2	2796.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTGTGTATTACACAGC	NA	False	NA	-1	True	AATAAA	-21	NA	30325558	30316395	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_30316588_30322839_30322941_30325475
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113276	chr7	-	515	4	NNC	ENSMUSG00000036751.8	novel	618	4	NA	NA	-8	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2835.05108713523	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTGTGTATTACACAGC	NA	False	NA	-1	True	AATAAA	-21	NA	30325584	30316395	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_30316588_30322839_30322941_30323924_30324032_30325469
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113287	chr7	-	195	1	NIC	ENSMUSG00000036751.8	novel	618	4	NA	NA	6318	3	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTGTGTATTACACAGC	6452	False	NA	-1	True	AATAAA	-21	NA	30316590	30316395	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_30316400_30316600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113318	chr7	-	1563	9	FSM	ENSMUSG00000036733.17	ENSMUST00000108141.2	1526	9	-32	-5	-32	5	multi-exon	TRUE	canonical	3	345	junction_5	209.790818435889	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGACTTAGAAACTGTTGG	3752	False	NA	-7	True	AATAAA	-23	NA	30349601	30340418	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345247_30346984_30347060_30347155_30347241_30349008_30349145_30349362
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113319	chr7	-	1650	10	FSM	ENSMUSG00000036733.17	ENSMUST00000042726.14	1784	10	141	-7	-32	5	multi-exon	FALSE	canonical	3	640	junction_5	133.345925331332	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGACTTAGAAACTGTTGG	3752	False	NA	-7	True	AATAAA	-23	NA	30349601	30340418	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155_30347241_30349008_30349145_30349362
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113335	chr7	-	707	2	FSM	ENSMUSG00000049761.7	ENSMUST00000051495.7	699	2	-8	0	-8	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCTGTGTCTGGGTGTA	NA	False	NA	NA	False	AATAAA	-21	NA	30371038	30370146	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_30370606_30370790
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113337	chr7	-	898	7	FSM	ENSMUSG00000006315.10	ENSMUST00000006478.10	870	7	-17	-11	-17	7	multi-exon	FALSE	canonical	3	739	junction_6	21.1850314032233	2182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCATCTCTCTCTCTCAG	9240	False	NA	-5	True	AGTAAA	-25	NA	30428982	30427118	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626_30428697_30428768
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113346	chr7	-	851	7	NNC	ENSMUSG00000006315.10	novel	774	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	293.234831946457	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTATGTCCATCTCTCT	9284	False	NA	-12	True	AGTAAA	-18	NA	30428938	30427125	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_30427329_30427411_30427534_30427629_30427715_30427852_30427994_30428081_30428142_30428626_30428697_30428768
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113360	chr7	-	650	5	NIC	ENSMUSG00000006315.10	novel	774	7	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_3	317.945258653121	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTATGTCCATCTCTCT	9284	False	NA	-12	True	AGTAAA	-18	NA	30428938	30427125	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_30427329_30427411_30427534_30427629_30427715_30428626_30428697_30428768
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113415	chr7	-	851	1	ISM	ENSMUSG00000051314.12	ENSMUST00000053156.10	2301	3	4572	5	1774	4	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGTTCACGGGTTTTG	7833	False	NA	NA	False	AATAAA	-18	NA	30518628	30517777	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_30517800_30518600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113427	chr7	-	934	4	ISM	ENSMUSG00000058239.14	ENSMUST00000167285.8	1968	7	1401	740	675	582	3prime_fragment	FALSE	canonical	3	80	junction_3	25.4863798048204	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGTCCATGTTGG	6056	False	NA	-4	True	AATAAA	-26	NA	30654200	30645416	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113472	chr7	-	1176	7	ISM	ENSMUSG00000001248.16	ENSMUST00000001280.14	2713	19	15363	0	-1451	0	3prime_fragment	FALSE	canonical	3	173	junction_6	52.4640088272162	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	1467	False	NA	-1	True	AATAAA	-15	NA	30835144	30829551	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113490	chr7	-	873	1	FSM	ENSMUSG00000052997.16	ENSMUST00000205711.2	1373	1	525	-25	525	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTGCCCTAGTGGGTT	NA	False	NA	-1	True	AATAAA	-26	NA	33840986	33840113	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_33840100_33841000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113520	chr7	-	983	6	NIC	ENSMUSG00000002635.12	novel	1295	7	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	69	junction_5	265.58795153395	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATGTGTTTACCTTAT	5743	False	NA	NA	False	ATTAAA	-20	NA	33896075	33884057	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_33884237_33885718_33885868_33888773_33888882_33892160_33892532_33895490_33895552_33895960
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113540	chr7	-	433	1	NIC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	3710	37	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTATCTGTTACTTGTGG	NA	False	NA	-4	True	GGGGCT	-28	NA	33901979	33901546	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_33901500_33902000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113549	chr7	+	737	2	FSM	ENSMUSG00000085105.3	ENSMUST00000127010.2	4175	2	-19	3457	-19	1198	multi-exon	FALSE	canonical	3	45	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGAGCTTTAAAAGTAAGA	NA	False	NA	NA	False	AATAAA	-19	NA	33933782	33936175	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_33933921_33935576
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113577	chr7	+	256	2	Antisense	novelGene_ENSMUSG00000060402.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATTATTTTTTTGAGCT	NA	False	NA	NA	False	AATAAA	-22	NA	34443373	34446806	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr7_+_34443485_34446661
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113588	chr7	+	479	1	NIC	ENSMUSG00000063931.15	novel	1881	15	NA	NA	1040	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGCCCATCTTCCTC	NA	False	NA	14	True	AATAAA	-19	NA	34743654	34744133	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_34743700_34744100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113593	chr7	-	837	2	FSM	ENSMUSG00000056216.10	ENSMUST00000130491.3	4709	2	169	3703	169	190	multi-exon	FALSE	canonical	3	425	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTTTTGTAGGAATGG	NA	False	NA	3	True	AATAAA	-19	NA	34755829	34749549	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_34750358_34755800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113597	chr7	-	810	1	FSM	ENSMUSG00000056216.10	ENSMUST00000205752.2	1610	1	571	229	571	190	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTTTTGTAGGAATGG	NA	False	NA	3	True	AATAAA	-19	NA	34750359	34749549	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_34749500_34750400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113612	chr7	-	1739	4	FSM	ENSMUSG00000030493.14	ENSMUST00000032704.12	1857	4	-1	119	-1	34	multi-exon	TRUE	canonical	3	143	junction_2	4.92160768674447	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGACTTTATTTAAATATT	NA	False	NA	NA	False	AATAAA	-38	NA	35096262	35091695	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_35092517_35094399_35094553_35094661_35094802_35095637
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113637	chr7	-	471	1	Intergenic	novelGene_394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACAGTTTCTTGTTCTGT	NA	False	NA	-6	True	AATAAA	-18	NA	35166842	35166371	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr7_-_35166400_35166800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113640	chr7	-	1611	12	FSM	ENSMUSG00000030491.17	ENSMUST00000032701.14	1620	12	1	8	1	-8	multi-exon	FALSE	canonical	3	378	junction_6	48.0311538018523	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGCTTCTAAAATTCTC	NA	False	NA	-21	True	AATAAA	-25	NA	35237169	35193044	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113650	chr7	-	1551	12	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	3	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	140.129691994639	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCAGAATTCTTGCTTC	NA	False	NA	-31	True	AATAAA	-15	NA	35237115	35193054	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228533_35228697_35236938
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113664	chr7	-	1502	3	FSM	ENSMUSG00000034875.6	ENSMUST00000040962.6	2298	3	796	0	-314	0	multi-exon	FALSE	canonical	3	351	junction_1	2	861	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTTTTATTCTACT	NA	False	NA	2	True	ATTAAA	-29	NA	35254933	35246609	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_35247549_35250878_35251087_35254578
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113684	chr7	+	883	1	ISM	ENSMUSG00000034867.17	ENSMUST00000040844.16	4284	29	52099	1	18864	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCGTGCCATTTTTGT	3449	False	NA	22	True	AGTAAA	-14	NA	35337767	35338650	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_35337800_35338600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113696	chr7	-	649	6	NIC	ENSMUSG00000030417.16	novel	684	6	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	740.910682876148	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGGGTGTTTCAGAAT	NA	False	NA	NA	False	AATAAA	-20	NA	35346939	35341438	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_35341611_35342039_35342112_35343048_35343141_35343775_35343838_35345568_35345607_35346726
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113724	chr7	-	569	2	Antisense	novelGene_ENSMUSG00000066543.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAATTCTTGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	35818298	35817661	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr7_-_35817991_35818058
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113738	chr7	+	644	2	Genic_Genomic	ENSMUSG00000066543.9	novel	555	1	NA	NA	-37	20478	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCTTTCAACATGGATG	NA	False	NA	NA	False	AAAAAG	-5	NA	35817661	35838731	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_+_35818281_35838706
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113739	chr7	+	641	2	Genic_Genomic	ENSMUSG00000066543.9	novel	555	1	NA	NA	-37	20486	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACATGGATGTTTACGTT	NA	False	NA	NA	False	AAAAAG	-13	NA	35817661	35838739	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_+_35818281_35838717
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113748	chr7	-	732	3	Antisense	novelGene_ENSMUSG00000066543.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAATTCTTGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	35838731	35817661	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr7_-_35818313_35830955_35831018_35838712
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113815	chr7	+	479	1	FSM	ENSMUSG00000056836.9	ENSMUST00000154478.3	395	1	-55	-29	-55	29	mono-exon	FALSE	NA	NA	NA	NA	NA	956	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTCTTATAGTGCTAAAA	NA	False	NA	NA	False	AATAAA	-30	NA	39840305	39840784	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_39840300_39840800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113818	chr7	-	2047	5	FSM	ENSMUSG00000056383.11	ENSMUST00000205338.2	2071	5	36	-12	-31	12	multi-exon	FALSE	canonical	3	47	junction_4	16.2845785944863	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGAGAGCGCTGTGG	NA	False	NA	NA	False	NA	NA	NA	41042767	41023201	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_41024799_41025914_41025973_41026169_41026297_41037531_41037680_41042650
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113826	chr7	-	645	2	NNC	ENSMUSG00000090744.8	novel	1430	4	NA	NA	28	43532	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCTATCAGTCATGTG	NA	False	NA	NA	False	NA	NA	NA	41210191	41151565	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_41152157_41210137
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113830	chr7	-	2853	4	FSM	ENSMUSG00000090744.8	ENSMUST00000073410.12	1430	4	-29	-1394	-29	1394	multi-exon	FALSE	canonical	3	131	junction_3	48.9285192909003	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTTTCTTTTTTTTTTAA	NA	False	NA	-1	True	NA	NA	NA	41210282	41193703	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_41196224_41197139_41197201_41197407_41197535_41210137
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113844	chr7	+	142	1	FSM	ENSMUSG00000092281.2	ENSMUST00000173370.2	648	1	599	-93	599	93	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTAAGATTTGTTTT	NA	False	NA	NA	False	AAGAAA	-16	NA	41670858	41671000	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_41670900_41671000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113899	chr7	+	1571	2	Antisense	novelGene_ENSMUSG00000108492.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGCCCCACTTTATTA	NA	False	NA	NA	False	NA	NA	NA	42602931	42732088	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr7_+_42603923_42731508
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113941	chr7	+	1941	4	FSM	ENSMUSG00000074887.5	ENSMUST00000206405.2	1428	4	-40	-473	-40	473	multi-exon	FALSE	canonical	3	215	junction_3	24.5356882927706	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATGCATTTGCCCAGTG	9958	False	NA	10	True	AATAAA	-40	NA	42863422	42876739	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_42863572_42872998_42873126_42873324_42873386_42875135
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113957	chr7	+	560	4	NNC	ENSMUSG00000074887.5	novel	1428	4	NA	NA	-13	-631	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	125.489264702426	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTGCAGGCACAAAATCA	9985	False	NA	NA	False	NA	NA	NA	42863449	42875126	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_42863572_42872998_42873126_42873324_42873386_42874876
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000113963	chr7	+	1921	5	NNC	ENSMUSG00000074887.5	novel	1492	5	NA	NA	-5	447	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	106.302634021928	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGGACACTCTTTGTA	9993	False	NA	12	True	AATAAA	-14	NA	42863457	42876713	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_42863572_42870265_42870307_42872998_42873126_42873324_42873386_42875135
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114062	chr7	+	1083	6	NNC	ENSMUSG00000054046.8	novel	718	3	NA	NA	-323	-774	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	15.8694675399019	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTACTGTGCCTCTCTCAC	NA	False	NA	14	True	AATAAA	-27	NA	43362499	43376184	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_43362686_43363215_43363307_43370390_43370581_43370691_43370961_43373178_43373316_43375974
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114067	chr7	+	914	6	NNC	ENSMUSG00000054046.8	novel	718	3	NA	NA	-260	-780	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	23.4810561943027	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCCCTACTGTGCCTC	NA	False	NA	8	True	AATAAA	-21	NA	43362562	43376178	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_43362686_43363215_43363307_43370390_43370581_43370791_43370961_43373178_43373316_43375974
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114095	chr7	+	206	1	NIC	ENSMUSG00000063903.6	novel	954	5	NA	NA	3970	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAAGTTCTGACATTCTC	NA	False	NA	7	True	AATAAA	-21	NA	43878836	43879042	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_43878800_43879000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114124	chr7	+	2092	7	FSM	ENSMUSG00000045411.17	ENSMUST00000084937.11	2092	7	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	279.849612391291	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_43896248_43896661_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114137	chr7	-	651	1	ISM	ENSMUSG00000004473.11	ENSMUST00000004587.11	2978	4	2007	1558	2007	-1558	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCCTAGTCATCCTTTG	NA	False	NA	NA	False	CATAAA	-23	NA	43954319	43953668	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_43953700_43954300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114143	chr7	-	1091	5	NNC	ENSMUSG00000008028.16	novel	913	6	NA	NA	0	4	intron_retention	FALSE	canonical	0	0	junction_4	12.4498995979887	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTCGGCAAAGTCGTG	NA	False	NA	NA	False	TATAAA	-23	NA	44024454	44009462	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44009806_44010473_44010608_44012075_44012440_44023746_44023949_44024406
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114152	chr7	+	1034	6	FSM	ENSMUSG00000038695.14	ENSMUST00000118493.8	922	6	-81	-31	11	0	multi-exon	FALSE	canonical	3	11	junction_1	23.6016948543955	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCCTGGGCTCAGCTC	4753	False	NA	24	True	AATAAA	-16	NA	44117414	44121076	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_44117615_44117729_44117842_44118230_44118394_44119835_44119962_44120536_44120732_44120838
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114186	chr7	-	1205	8	ISM	ENSMUSG00000038670.12	ENSMUST00000165208.4	3611	28	17452	18	1874	-18	3prime_fragment	FALSE	canonical	2	4	junction_7	5.67845911838623	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGTCCATCTTTCCAG	NA	False	NA	-13	True	GATAAA	-19	NA	44156628	44151140	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_44151267_44153060_44153248_44154422_44154560_44154659_44154820_44154989_44155130_44155475_44155672_44156231_44156321_44156458
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114201	chr7	-	1054	2	ISM	ENSMUSG00000030739.19	ENSMUST00000208044.2	1438	7	7002	-2	7002	0	3prime_fragment	FALSE	canonical	3	83	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTGCGTTTCTAATT	618	False	NA	-1	True	AATAAA	-17	NA	44256547	44255226	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_44255788_44256054
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114229	chr7	-	689	1	ISM	ENSMUSG00000038539.16	ENSMUST00000047356.11	1816	3	3713	1	2713	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGTCTTATCTTTG	NA	False	NA	-1	True	AATAAA	-18	NA	44462369	44461680	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_44461700_44462400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114240	chr7	+	970	1	Intergenic	novelGene_395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTTGTTCAGGATTGTA	8	True	NA	15	True	AATAAA	-17	NA	44480288	44481258	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr7_+_44480300_44481300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114260	chr7	-	844	6	ISM	ENSMUSG00000038502.18	ENSMUST00000046575.17	1883	12	4845	-1	0	0	3prime_fragment	FALSE	canonical	3	742	junction_3	37.2955761451677	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTCCCTCCCTGCTTG	NA	False	NA	-8	True	AATAAA	-15	NA	44514367	44512490	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114267	chr7	-	378	1	NIC	ENSMUSG00000038502.18	novel	657	7	NA	NA	528	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	NA	False	NA	-9	True	AATAAA	-14	NA	44512869	44512491	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_44512500_44512900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114278	chr7	+	1486	10	FSM	ENSMUSG00000011658.17	ENSMUST00000209039.2	1453	10	-13	-20	0	0	multi-exon	FALSE	canonical	3	34	junction_5	26.1448954015034	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGGGCTCTTTGCTGTCG	NA	False	NA	26	True	AATAAA	-37	NA	44545516	44550048	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44547049_44548199_44548296_44548408_44548516_44548597_44548663_44548735_44548811_44549556
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114290	chr7	+	180	1	ISM	ENSMUSG00000011658.17	ENSMUST00000071207.14	1698	11	4366	0	2178	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGGGCTCTTTGCTGTCG	NA	False	NA	26	True	AATAAA	-37	NA	44549868	44550048	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_44549900_44550000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114294	chr7	-	996	1	Genic_Genomic	ENSMUSG00000109324.3	novel	NA	NA	NA	NA	1363	1	mono-exon	FALSE	NA	NA	NA	NA	NA	761	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTGTTTGCGTGGTTT	532	False	NA	NA	False	NA	NA	NA	44626407	44625411	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_-_44625400_44626400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114328	chr7	-	1061	4	ISM	ENSMUSG00000109324.3	ENSMUST00000208312.2	659	6	-42	2806	-11	-1416	5prime_fragment	FALSE	canonical	3	3261	junction_3	184.878939369043	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAAACTCTTGTTTTCCTC	NA	False	NA	NA	False	NA	NA	NA	44635791	44630356	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_44631075_44631161_44631318_44632909_44633012_44635706
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114350	chr7	-	787	6	NIC	ENSMUSG00000003190.13	novel	1075	7	NA	NA	-5	-5	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	60.7730203297483	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGCCCGAAAGTGTGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	44647008	44640650	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_44640879_44643603_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114374	chr7	-	1047	4	ISM	ENSMUSG00000046574.9	ENSMUST00000057293.8	7023	14	-459	22339	-459	-21647	5prime_fragment	FALSE	canonical	3	13	junction_3	4.10960933531265	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACAGTGCCCTCGTCATT	NA	False	NA	NA	False	NA	NA	NA	44702764	44699325	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_44699553_44699628_44699791_44700641_44700755_44702219
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114400	chr7	-	1472	7	FSM	ENSMUSG00000019539.12	ENSMUST00000019683.11	1462	7	-6	-4	-6	4	multi-exon	FALSE	canonical	3	94	junction_6	35.1362427637839	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGTCTGTCTATC	6654	False	NA	0	True	AATAAA	-29	NA	44741651	44732332	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_44732788_44732989_44733190_44734327_44734389_44736088_44736262_44737921_44738125_44740864_44741113_44741519
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114422	chr7	-	751	3	NNC	ENSMUSG00000003420.9	novel	595	2	NA	NA	-2695	1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	43	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCGTCTCTGTGTCCGTC	NA	False	NA	NA	False	AATACA	-14	NA	44755970	44752257	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44752698_44753063_44753185_44755780
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114462	chr7	-	1338	4	ISM	ENSMUSG00000003429.12	ENSMUST00000003521.10	661	5	67	2	-21	-2	intron_retention	FALSE	canonical	3	18027	junction_3	5503.46620069772	1455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTTGGAGTCTCATGTG	NA	False	NA	-3	True	AATAAA	-22	NA	44773796	44771804	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_44771983_44772252_44772383_44772586_44772663_44772842
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114466	chr7	-	606	5	NNC	ENSMUSG00000003429.12	novel	661	5	NA	NA	-41	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	12148.5848352802	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTTGGAGTCTCATGTG	NA	False	NA	-3	True	AATAAA	-22	NA	44773816	44771804	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44771983_44772252_44772383_44772586_44772663_44772842_44772969_44773720
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114487	chr7	-	560	5	NNC	ENSMUSG00000003429.12	novel	661	5	NA	NA	-21	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12424.5540035649	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGGCTTGGAGTCTCAT	NA	False	NA	-6	True	AATAAA	-19	NA	44773796	44771807	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44771954_44772252_44772383_44772586_44772663_44772842_44772975_44773720
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114488	chr7	-	569	5	NNC	ENSMUSG00000003429.12	novel	661	5	NA	NA	-21	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12424.5540035649	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGGCTTGGAGTCTCAT	NA	False	NA	-6	True	AATAAA	-19	NA	44773796	44771807	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44771954_44772243_44772383_44772586_44772663_44772842_44772975_44773720
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114500	chr7	-	574	5	NNC	ENSMUSG00000003429.12	novel	661	5	NA	NA	-21	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12424.5540035649	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGGCTTGGAGTCTCAT	NA	False	NA	-6	True	AATAAA	-19	NA	44773796	44771807	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44771983_44772267_44772383_44772586_44772663_44772842_44772975_44773720
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114505	chr7	-	563	5	NNC	ENSMUSG00000003429.12	novel	661	5	NA	NA	-21	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13022.6814515099	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGGCTTGGAGTCTCAT	NA	False	NA	-6	True	AATAAA	-19	NA	44773796	44771807	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44771983_44772252_44772383_44772586_44772663_44772868_44772975_44773720
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114510	chr7	-	575	5	NNC	ENSMUSG00000003429.12	novel	661	5	NA	NA	-21	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12343.4255071273	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGGCTTGGAGTCTCAT	NA	False	NA	-6	True	AATAAA	-19	NA	44773796	44771807	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44771983_44772252_44772369_44772586_44772663_44772842_44772975_44773720
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114613	chr7	-	1170	8	NIC	ENSMUSG00000074129.15	novel	734	8	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	106	junction_5	7394.52164836667	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTACGATGTGTGCTGT	NA	False	NA	-6	True	AATAAA	-14	NA	44778160	44774986	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776512_44776632_44776699_44776919_44776993_44777965
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114681	chr7	-	646	8	NIC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	47	junction_1	5850.78747883129	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778163	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_44775442_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114684	chr7	-	614	7	NIC	ENSMUSG00000074129.15	novel	658	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	6371.09934042435	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_44775457_44775538_44775678_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114685	chr7	-	680	9	NNC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_8	7149.38187778321	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44777552_44777575_44778123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114687	chr7	-	970	6	NIC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	11064	junction_5	2260.78420022788	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776699_44776919_44776993_44778123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114699	chr7	-	568	7	NNC	ENSMUSG00000074129.15	novel	562	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	7704.40935258649	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776414_44776517_44776632_44776699_44776919_44776993_44778127
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114700	chr7	-	672	8	NNC	ENSMUSG00000074129.15	novel	658	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	7478.63376423741	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44775457_44775538_44775678_44775901_44775962_44776132_44776219_44776414_44776517_44776634_44776699_44776919_44776993_44778123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114702	chr7	-	613	7	NNC	ENSMUSG00000074129.15	novel	562	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	49	junction_3	6071.65822124035	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44775457_44775538_44775662_44775901_44776003_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114703	chr7	-	670	8	NNC	ENSMUSG00000074129.15	novel	658	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	7661.63641336577	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44775457_44775538_44775678_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778127
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114705	chr7	-	740	9	NNC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	7299.95696905126	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44777492_44777575_44778123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114706	chr7	-	523	7	NNC	ENSMUSG00000074129.15	novel	552	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	6353.08417883262	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776448_44776919_44776993_44778123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114708	chr7	-	695	8	NNC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5931.55847986008	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778086
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114709	chr7	-	761	9	NNC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_8	7147.08134485679	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778163	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44777474_44777575_44778123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114710	chr7	-	829	7	NIC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	11064	junction_6	2335.47851984699	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_44775457_44775538_44775662_44775901_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114714	chr7	-	636	8	NNC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5931.55847986008	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776971_44778123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114715	chr7	-	662	8	NNC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5978.64215353286	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776628_44776699_44776919_44776993_44778123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114718	chr7	-	724	8	NNC	ENSMUSG00000074129.15	novel	658	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6001.12606099889	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44775457_44775538_44775728_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114725	chr7	-	810	8	NNC	ENSMUSG00000074129.15	novel	734	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7402.81078719566	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44775457_44775538_44775662_44775901_44775956_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44777965
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114726	chr7	-	646	8	NNC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5931.55847986008	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778135
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114727	chr7	-	809	8	NNC	ENSMUSG00000074129.15	novel	734	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7195.4722640033	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776421_44776517_44776632_44776699_44776919_44776993_44777965
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114730	chr7	-	662	8	NNC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	5974.23880216602	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776915_44776993_44778123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114733	chr7	-	562	7	NNC	ENSMUSG00000074129.15	novel	562	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_5	7328.2893562474	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776414_44776517_44776632_44776699_44776929_44776993_44778123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114735	chr7	-	685	8	NNC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5931.55847986008	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778096
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114742	chr7	-	626	8	NNC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5775.57521828266	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776187_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114746	chr7	-	636	8	NNC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	5974.23880216602	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776941_44776993_44778123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114756	chr7	-	651	8	NNC	ENSMUSG00000074129.15	novel	690	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	5978.31604165233	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776512_44776634_44776699_44776919_44776993_44778123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114776	chr7	-	632	8	NNC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	5977.98993246501	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776491_44776632_44776699_44776919_44776993_44778123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114791	chr7	-	995	6	NIC	ENSMUSG00000074129.15	novel	552	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	11064	junction_5	2559.26939574559	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776993_44778123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114839	chr7	-	740	7	NIC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	11064	junction_6	2230.78115366693	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114844	chr7	-	1684	2	NIC	ENSMUSG00000074129.15	novel	562	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	11064	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_44776993_44778123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114868	chr7	+	1078	10	FSM	ENSMUSG00000003423.16	ENSMUST00000210139.2	1077	10	0	-1	0	1	multi-exon	FALSE	canonical	3	233	junction_1	50.5151242478703	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGACAATGATGCATGG	NA	False	NA	22	True	AATAAA	-22	NA	44803726	44809490	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_44803845_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114884	chr7	+	1062	10	NNC	ENSMUSG00000003423.16	novel	1077	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	125.1727694917	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCAGACAATGATGCATG	NA	False	NA	21	True	AATAAA	-21	NA	44803737	44809489	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_44803845_44805729_44805824_44806155_44806223_44807026_44807211_44807872_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114913	chr7	-	929	5	FSM	ENSMUSG00000030792.9	ENSMUST00000033057.9	1149	5	220	0	-80	0	multi-exon	FALSE	canonical	3	39	junction_1	6.17960354715414	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTTTGGTATCTCTTC	8521	False	NA	2	True	AATAAA	-23	NA	44861327	44856942	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_44857323_44859536_44859627_44859754_44859896_44860824_44860995_44861179
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114950	chr7	+	794	1	FSM	ENSMUSG00000046721.12	ENSMUST00000026901.12	653	1	-31	-110	-31	110	mono-exon	FALSE	NA	NA	NA	NA	NA	1162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGGCAGTGGTGGCACA	NA	False	NA	NA	False	NA	NA	NA	44974357	44975151	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_44974400_44975200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114975	chr7	-	762	6	FSM	ENSMUSG00000003872.10	ENSMUST00000003971.10	735	6	-27	0	-27	0	multi-exon	FALSE	canonical	2	8	junction_1	1.93907194296653	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGAGTGTCTTGTGTGTCTG	7915	False	NA	1	True	TTTAAA	-16	NA	45020034	45017314	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_45017423_45017727_45017892_45018564_45018775_45019338_45019411_45019550_45019670_45019945
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114987	chr7	-	1718	10	NNC	ENSMUSG00000063511.12	novel	1735	10	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	472.572497540958	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGATGTCTTACTGCAC	9055	False	NA	-1	True	AATAAA	-24	NA	45045152	45025877	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041504_45041558_45041686_45041750_45044082_45044240_45044932
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000114993	chr7	-	1683	10	NNC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	452.353598170477	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCATGTGATGTCTTAC	9091	False	NA	-6	True	AATAAA	-19	NA	45045116	45025882	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036808_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115010	chr7	-	106	1	ISM	ENSMUSG00000003868.15	ENSMUST00000211214.2	2312	18	16095	136	494	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTGTGTCCTCAGAG	NA	False	NA	-2	True	TATAAA	-17	NA	45071425	45071319	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_45071300_45071400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115015	chr7	-	1492	15	NNC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_14	647.047138931933	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTGTGTCCTCAGAG	-19	True	NA	-2	True	TATAAA	-17	NA	45083707	45071319	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080795_45083675
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115022	chr7	-	1046	10	NIC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	-6	1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_9	779.911960843445	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTGTGTCCTCAGAG	-19	True	NA	-2	True	TATAAA	-17	NA	45083707	45071319	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45083675
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115047	chr7	-	1582	14	NIC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	-6	1	intron_retention	FALSE	canonical	3	1951	junction_13	209.501917066259	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTGTGTCCTCAGAG	-19	True	NA	-2	True	TATAAA	-17	NA	45083707	45071319	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115069	chr7	-	923	4	NNC	ENSMUSG00000050708.17	novel	968	4	NA	NA	-4	2	intron_retention	FALSE	canonical	2	8	junction_2	31758.0183365818	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTTTTTCTATATATG	NA	False	NA	-17	True	AATAAA	-19	NA	45109267	45107365	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_45107708_45107958_45108085_45108513_45108655_45108953
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115076	chr7	-	909	4	NNC	ENSMUSG00000050708.17	novel	968	4	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	31761.6928844936	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	False	NA	-19	True	AATAAA	-17	NA	45109262	45107367	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_45107708_45107958_45108072_45108507_45108655_45108953
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115077	chr7	-	1644	2	FSM	ENSMUSG00000050708.17	ENSMUST00000211694.2	604	2	-1039	-1	1	0	multi-exon	FALSE	canonical	3	56898	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	False	NA	-19	True	AATAAA	-17	NA	45109262	45107367	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_45107708_45107958
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115078	chr7	-	944	4	FSM	ENSMUSG00000050708.17	ENSMUST00000210106.2	943	4	0	-1	0	0	multi-exon	FALSE	canonical	3	43	junction_2	31741.9424561398	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	False	NA	-19	True	AATAAA	-17	NA	45109263	45107367	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_45107708_45107958_45108106_45108507_45108655_45108953
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115100	chr7	-	1896	1	FSM	ENSMUSG00002076377.1	ENSMUST00020182363.1	109	1	-1642	-145	-1642	145	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	False	NA	-19	True	AATAAA	-17	NA	45109263	45107367	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_45107400_45109300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115131	chr7	-	273	1	Genic_Genomic	ENSMUSG00000003873.12	novel	NA	NA	NA	NA	4077	2	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCCCTTGTCCGCCCAGC	8769	False	NA	0	True	AATAAA	-24	NA	45111391	45111118	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_-_45111100_45111400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115177	chr7	-	679	5	ISM	ENSMUSG00000003873.12	ENSMUST00000033093.10	867	6	0	1620	0	-157	5prime_fragment	FALSE	canonical	3	2296	junction_4	392.831070563417	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTAAGTTATTTCTTTT	9915	False	NA	NA	False	NA	NA	NA	45116322	45112740	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_45112928_45114612_45114749_45115400_45115548_45115643_45115696_45116165
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115225	chr7	-	556	3	Antisense	novelGene_ENSMUSG00000040428.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGAGTGCTTGCTGCCCTT	1672	False	NA	NA	False	NA	NA	NA	45188129	45185035	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr7_-_45185366_45187097_45187270_45188075
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115227	chr7	-	384	2	Antisense	novelGene_ENSMUSG00000040428.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGAGTGCTTGCTGCCCTT	1672	False	NA	NA	False	NA	NA	NA	45188129	45185035	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr7_-_45185366_45188075
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115236	chr7	+	695	3	ISM	ENSMUSG00000040428.20	ENSMUST00000211797.2	2655	18	19857	-1	15	1	3prime_fragment	FALSE	canonical	3	13	junction_1	3.5	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGTGACATTGTGTTC	NA	False	NA	9	True	AATAAA	-18	NA	45199273	45203654	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_45199390_45202992_45203106_45203188
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115257	chr7	+	1244	8	ISM	ENSMUSG00000030825.20	ENSMUST00000107752.12	1400	9	1144	0	-7	0	3prime_fragment	FALSE	canonical	3	159	junction_2	204.709849418585	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGAGTGGTCGTGTCCT	NA	False	NA	10	True	NA	NA	NA	45205460	45216745	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_45205518_45205736_45205820_45207031_45207099_45208804_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115262	chr7	+	1321	5	ISM	ENSMUSG00000030825.20	ENSMUST00000107752.12	1400	9	4211	-7	-102	7	3prime_fragment	FALSE	canonical	3	557	junction_3	22.2864869371554	448	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCGTGTCCTCTTTTCA	NA	False	NA	17	True	NA	NA	NA	45208527	45216752	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115279	chr7	+	296	1	ISM	ENSMUSG00000030826.20	ENSMUST00000033098.16	1772	11	19262	1	3994	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTATCATGCTCTAA	NA	False	NA	NA	False	AATAAA	-17	NA	45238838	45239134	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_45238800_45239100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115308	chr7	+	857	3	NNC	ENSMUSG00000059824.13	novel	1732	2	NA	NA	-65	41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.5	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTGTTGTGGCGGACA	NA	False	NA	NA	False	AATAAA	-17	NA	45357247	45359579	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_45357402_45357683_45357896_45359088
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115325	chr7	+	714	6	NNC	ENSMUSG00000059070.17	novel	2989	7	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3294.36625771938	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGTTCATTCATGAAG	5892	False	NA	17	True	AATAAA	-24	NA	45367464	45370260	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_45367564_45368676_45368764_45368952_45369061_45369343_45369443_45369717_45369916_45370137
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115358	chr7	+	625	6	NNC	ENSMUSG00000059070.17	novel	679	6	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3103.20137922114	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCTCTGTGTTCATTCA	5953	False	NA	12	True	AATAAA	-19	NA	45367525	45370255	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_45367564_45368676_45368764_45368952_45369061_45369343_45369447_45369740_45369912_45370137
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115366	chr7	+	628	6	NNC	ENSMUSG00000059070.17	novel	679	6	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3242.84932736629	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCTCTGTGTTCATTCA	5953	False	NA	12	True	AATAAA	-19	NA	45367525	45370255	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_45367564_45368676_45368764_45368952_45369045_45369343_45369443_45369717_45369912_45370137
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115368	chr7	+	505	6	NNC	ENSMUSG00000059070.17	novel	679	6	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3294.36625771938	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCTCTGTGTTCATTCA	5953	False	NA	12	True	AATAAA	-19	NA	45367525	45370255	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_45367564_45368676_45368764_45368952_45369061_45369343_45369443_45369717_45369773_45370137
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115374	chr7	+	1145	4	ISM	ENSMUSG00000059070.17	ENSMUST00000072503.13	679	6	31	4	3	0	intron_retention	FALSE	canonical	3	6098	junction_1	994.324226128815	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCTCTGTGTTCATTCA	5953	False	NA	12	True	AATAAA	-19	NA	45367525	45370255	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_45367564_45368676_45368764_45368952_45369061_45369343
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115375	chr7	+	635	6	NNC	ENSMUSG00000059070.17	novel	679	6	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	3242.46736914961	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCTCTGTGTTCATTCA	5953	False	NA	12	True	AATAAA	-19	NA	45367525	45370255	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_45367564_45368676_45368764_45368952_45369061_45369352_45369443_45369717_45369912_45370137
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115377	chr7	+	652	6	NNC	ENSMUSG00000059070.17	novel	679	6	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3753.6127450764	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCTCTGTGTTCATTCA	5953	False	NA	12	True	AATAAA	-19	NA	45367525	45370255	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_45367564_45368676_45368764_45368952_45369061_45369343_45369447_45369717_45369916_45370137
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115383	chr7	+	652	6	NNC	ENSMUSG00000059070.17	novel	679	6	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3216.61278987695	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTCCTCTGTGTTCAT	5953	False	NA	9	True	AATAAA	-16	NA	45367525	45370252	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_45367564_45368676_45368775_45368952_45369061_45369343_45369443_45369717_45369912_45370137
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115388	chr7	+	624	6	NNC	ENSMUSG00000059070.17	novel	679	6	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3216.61278987695	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCTCTGTGTTCATTCA	5953	False	NA	12	True	AATAAA	-19	NA	45367525	45370255	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_45367564_45368676_45368764_45368972_45369061_45369343_45369443_45369717_45369912_45370137
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115484	chr7	+	2168	5	FSM	ENSMUSG00000002778.15	ENSMUST00000002855.14	1599	5	22	-591	22	591	multi-exon	TRUE	canonical	3	208	junction_1	16.5378354085412	969	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCTAGCTTTTAAAAAAGA	3966	False	NA	NA	False	AATAAA	-29	NA	45522217	45533747	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_45522526_45523182_45523284_45523466_45523626_45530923_45531177_45532400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115519	chr7	+	1106	5	FSM	ENSMUSG00000040189.19	ENSMUST00000211367.2	1078	5	-28	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	8.39642781187333	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTTTGGTCATGGTG	3132	False	NA	NA	False	NA	NA	NA	45573638	45581037	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_45573811_45573921_45574014_45577947_45578048_45578490_45578681_45580485
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115561	chr7	-	555	4	FSM	ENSMUSG00000040026.9	ENSMUST00000006956.9	555	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	7.31816613336672	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCGCTGTCACTGTTG	NA	False	NA	NA	False	AATAAA	-16	NA	46365124	46361421	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_46361689_46362012_46362152_46364433_46364529_46365070
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115581	chr7	+	1610	8	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	-22	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2891.44232069007	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGCTCTTTTATTAAGAT	NA	False	NA	22	True	AATAAA	-18	NA	46495240	46505054	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500480_46501300_46501419_46503406_46503531_46504400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115587	chr7	+	1590	8	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2882.58672099932	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495264	46505051	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_46495342_46497019_46497174_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115588	chr7	+	1578	8	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2831.03902466633	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495264	46505051	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501411_46503406_46503531_46504400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115589	chr7	+	1593	8	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2862.36284583637	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495264	46505051	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_46495342_46497019_46497170_46498396_46498522_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115604	chr7	+	1728	8	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	2907.20433771424	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495266	46505051	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_46495486_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115612	chr7	+	1762	8	FSM	ENSMUSG00000063229.16	ENSMUST00000005051.6	1766	8	5	-1	5	0	multi-exon	FALSE	canonical	2	26	junction_1	2898.88755580904	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46496559	46505051	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_46496813_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115625	chr7	-	1459	10	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	-7	217	combination_of_known_junctions	FALSE	canonical	3	163	junction_7	331.9070969227	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTCTTGGACTTGAGAT	NA	False	NA	-29	True	AATAAA	-19	NA	46569724	46539116	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558740_46560492_46560559_46563125_46563211_46569568
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115634	chr7	-	1366	8	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	1	214	combination_of_known_junctions	FALSE	canonical	3	40	junction_3	409.120460280842	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTTCTTGGACTTGA	NA	False	NA	-32	True	AATAAA	-16	NA	46569716	46539119	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115648	chr7	+	339	2	FSM	ENSMUSG00000109118.2	ENSMUST00000208046.2	334	2	2	-7	2	7	multi-exon	FALSE	canonical	3	5	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGAGTCTGGGGGTGGG	NA	False	NA	NA	False	AATAAA	-22	NA	46658294	46658763	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_46658342_46658471
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115650	chr7	+	327	2	NIC	ENSMUSG00000109118.2	novel	334	2	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGTATACCTGAGTCTGG	NA	False	NA	NA	False	AATAAA	-15	NA	46658297	46658756	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_46658340_46658471
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115658	chr7	-	331	1	ISM	ENSMUSG00000046179.18	ENSMUST00000058745.15	3691	13	14282	0	8492	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACATTTTCATTTGGCC	NA	False	NA	-1	True	ATTAAA	-17	NA	48516507	48516176	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_48516200_48516500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115716	chr7	+	1294	1	FSM	ENSMUSG00000078636.5	ENSMUST00000107041.5	1232	1	-33	-29	-33	29	mono-exon	FALSE	NA	NA	NA	NA	NA	1616	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTCAGTAGTTAAAAGAGT	NA	False	NA	NA	False	AATAAA	-43	NA	51396361	51397655	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_51396400_51397700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115730	chr7	+	426	1	FSM	ENSMUSG00000074092.6	ENSMUST00000117187.2	264	1	-56	-106	-56	106	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTGGACATACAGAAGCT	NA	False	NA	NA	False	AATAAA	-25	NA	52405156	52405582	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_52405200_52405600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115734	chr7	-	579	2	Genic_Genomic	ENSMUSG00000099647.2	novel	321	1	NA	NA	-46	275	multi-exon	FALSE	canonical	3	74	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGTGCTACTTCAAAGC	NA	False	NA	NA	False	AATAAA	-40	NA	54062272	54061630	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_-_54062012_54062074
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115789	chr7	-	1328	10	NNC	ENSMUSG00000102252.6	novel	1932	10	NA	NA	0	-612	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_8	608.651778650421	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTTTTTCTTTGTCTG	NA	False	NA	-9	True	AATAAA	-18	NA	59654859	59632861	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649050_59649162_59654783
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115791	chr7	-	1446	11	NNC	ENSMUSG00000102252.6	novel	1932	10	NA	NA	0	-612	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_9	802.596262139315	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTTTTTCTTTGTCTG	NA	False	NA	-9	True	AATAAA	-18	NA	59654859	59632861	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59652677_59652811_59654783
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115794	chr7	-	1462	11	NNC	ENSMUSG00000102252.6	novel	1932	10	NA	NA	0	-612	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	789.087859493479	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTTTTTCTTTGTCTG	NA	False	NA	-9	True	AATAAA	-18	NA	59654859	59632861	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59648013_59648163_59649065_59649162_59654783
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115797	chr7	-	1387	10	ISM	ENSMUSG00000102252.6	ENSMUST00000098402.5	2076	11	7820	612	7820	-612	3prime_fragment	FALSE	canonical	0	0	junction_9	643.228316126293	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTTTTTCTTTGTCTG	NA	False	NA	-9	True	AATAAA	-18	NA	59782147	59632861	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59781997
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115799	chr7	-	1317	10	NNC	ENSMUSG00000102252.6	novel	1932	10	NA	NA	0	-612	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	633.405609910953	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTTTTTCTTTGTCTG	NA	False	NA	-9	True	AATAAA	-18	NA	59654859	59632861	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649061_59649162_59654783
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115812	chr7	-	166	1	NIC	ENSMUSG00000102252.6	novel	1932	10	NA	NA	21832	-612	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTTTTTCTTTGTCTG	NA	False	NA	-9	True	AATAAA	-18	NA	59633027	59632861	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_59632900_59633000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115822	chr7	+	1655	1	FSM	ENSMUSG00000033585.6	ENSMUST00000038775.6	3694	1	1705	334	1705	-334	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACTGTGAAATAATTTCT	NA	False	NA	NA	False	AATAAA	-20	NA	61998021	61999676	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_61998000_61999700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115827	chr7	-	744	1	FSM	ENSMUSG00000070526.3	ENSMUST00000094339.3	2640	1	1897	-1	1897	1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGCCTAACATTTTTTT	NA	False	NA	NA	False	AATAAA	-32	NA	62112361	62111617	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_62111600_62112400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115835	chr7	-	364	3	Intergenic	novelGene_396	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGGGACTGAATCCT	NA	False	NA	NA	False	AATAAA	-18	NA	63452704	63419339	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr7_-_63419421_63420543_63420656_63452533
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115849	chr7	+	2002	10	FSM	ENSMUSG00000030523.19	ENSMUST00000205960.2	1992	10	7	-17	7	17	multi-exon	FALSE	canonical	3	724	junction_5	65.6911967719673	346	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTATGTTTCATGAAGCTT	NA	False	NA	43	True	ATTAAA	-40	NA	63835135	63861192	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115889	chr7	+	879	2	FSM	ENSMUSG00000033429.11	ENSMUST00000206138.2	327	2	119	-671	-14	671	multi-exon	FALSE	canonical	3	27	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGTTCTTTGTTCAGAG	NA	False	NA	NA	False	AATATA	-15	NA	64042473	64049201	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_64042592_64048440
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115890	chr7	+	586	3	NNC	ENSMUSG00000033429.11	novel	828	3	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	99	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTATTTGTTATTTGA	NA	False	NA	21	True	ATTAAA	-22	NA	64042473	64061869	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_64042592_64050073_64050255_64061582
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115892	chr7	+	964	4	NNC	ENSMUSG00000033429.11	novel	828	3	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	84.9156444164835	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTATTTGTTATTTGA	NA	False	NA	21	True	ATTAAA	-22	NA	64042473	64061869	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_64042592_64048440_64048662_64049916_64050255_64061582
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115919	chr7	+	292	1	NIC	ENSMUSG00000033429.11	novel	828	3	NA	NA	19055	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTATTTGTTATTTGA	NA	False	NA	21	True	ATTAAA	-22	NA	64061577	64061869	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_64061600_64061900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115935	chr7	+	963	6	FSM	ENSMUSG00000078681.11	ENSMUST00000107495.5	1003	6	35	5	5	-3	multi-exon	FALSE	canonical	3	37	junction_2	226.65709783724	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCCAGAACTTTTTATTT	NA	False	NA	23	True	AATAAA	-23	NA	65343199	65351656	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_65343318_65343598_65343692_65344890_65345076_65347443_65347619_65348839_65348916_65351340
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115956	chr7	+	1056	9	NNC	ENSMUSG00000030512.14	novel	1248	9	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	982.0284412251	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGCTGTGTATCTGCA	NA	False	NA	23	True	AATAAA	-23	NA	65710281	65724335	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_65710441_65711871_65712024_65713514_65713594_65718914_65718962_65719171_65719275_65719866_65719947_65720337_65720414_65720979_65721074_65724069
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115960	chr7	+	972	8	FSM	ENSMUSG00000030512.14	ENSMUST00000032723.9	955	8	-10	-7	2	0	multi-exon	FALSE	canonical	3	89	junction_5	1022.69418095299	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGCTGTGTATCTGCA	NA	False	NA	23	True	AATAAA	-23	NA	65710281	65724335	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65719275_65720337_65720414_65720979_65721074_65724069
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000115965	chr7	+	1051	9	NNC	ENSMUSG00000030512.14	novel	1248	9	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	986.552828983324	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGCTGTGTATCTGCA	NA	False	NA	23	True	AATAAA	-23	NA	65710286	65724335	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65719279_65719866_65719947_65720337_65720414_65720979_65721074_65724069
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116017	chr7	+	1182	6	NNC	ENSMUSG00000075701.11	novel	1191	6	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	197.704425848285	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCTCTGGTTTTTCTT	NA	False	NA	7	True	AGTAAA	-16	NA	65729406	65739153	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_65729538_65730079_65730219_65733147_65733255_65736694_65736785_65736940_65737017_65738514
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116023	chr7	+	641	1	NIC	ENSMUSG00000075701.11	novel	1191	6	NA	NA	8804	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCTCTGGTTTTTCTT	NA	False	NA	7	True	AGTAAA	-16	NA	65738512	65739153	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_65738500_65739200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116038	chr7	+	477	1	ISM	ENSMUSG00000053091.17	ENSMUST00000121777.9	2729	8	24377	0	4125	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCGTGTCTGGGTCTTTG	NA	False	NA	14	True	AATAAA	-20	NA	66364018	66364495	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_66364000_66364500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116045	chr7	+	557	3	FSM	ENSMUSG00000043831.13	ENSMUST00000208698.2	551	3	-6	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	14	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTGGTTTATCTAAA	NA	False	NA	NA	False	ATTAAA	-31	NA	66872355	66874375	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_66872378_66873356_66873640_66874123
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116049	chr7	-	1364	10	NIC	ENSMUSG00000030556.14	novel	2923	10	NA	NA	0	-468	combination_of_known_junctions	FALSE	canonical	3	41	junction_5	13.5026289164118	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGTGTTGTCTTCTGTGT	572	False	NA	NA	False	AATACA	-17	NA	67294979	67164621	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209718_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116110	chr7	-	1402	3	FSM	ENSMUSG00000097415.3	ENSMUST00000181224.2	656	3	-22	-724	-22	0	multi-exon	FALSE	canonical	3	19	junction_1	6.5	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTAGTGGTCTTGCCC	NA	False	NA	0	True	NA	NA	NA	75431869	75418785	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_75419986_75430372_75430505_75431799
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116118	chr7	-	535	2	Intergenic	novelGene_397	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCACTTCTGCACTGCCA	5025	False	NA	NA	False	NA	NA	NA	75636899	75634327	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr7_-_75634804_75636840
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116170	chr7	-	500	1	Genic_Genomic	ENSMUSG00000030610.14	novel	NA	NA	NA	NA	6218	1	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCTTCCTTGATGT	NA	False	NA	0	True	AATAAA	-21	NA	78477718	78477218	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_-_78477200_78477700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116186	chr7	-	1419	5	FSM	ENSMUSG00000030606.9	ENSMUST00000206092.2	3358	5	22	1917	-1	1	multi-exon	FALSE	canonical	2	5	junction_4	1.87082869338697	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTAATTCTCCTGGCATC	2297	False	NA	NA	False	NA	NA	NA	78780744	78766766	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_78767242_78767596_78767900_78771394_78771764_78773117_78773300_78780654
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116194	chr7	-	2035	9	FSM	ENSMUSG00000030605.16	ENSMUST00000107409.5	2008	9	-27	0	-20	0	multi-exon	TRUE	canonical	3	790	junction_6	144.155948541848	540	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTGCCTCCTCATTG	NA	False	NA	-5	True	AATACA	-19	NA	78798828	78783515	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78794994_78795127_78795369_78795493_78798642
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116201	chr7	-	1025	3	NNC	ENSMUSG00000108387.2	novel	239	2	NA	NA	85	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTGTAATCTGCTCTC	NA	False	NA	NA	False	AATAAA	-23	NA	78922698	78921431	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_78922092_78922195_78922308_78922445
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116210	chr7	+	605	4	NNC	ENSMUSG00000039187.17	novel	1301	10	NA	NA	2	-2235	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	166.391105531516	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTATTTATTTATTTAT	NA	False	NA	NA	False	ATTAAA	-6	NA	79042057	79049399	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_79042140_79045640_79045744_79048883_79048957_79049052
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116223	chr7	-	656	3	Antisense	novelGene_ENSMUSG00000039187.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_2	5.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTGATTTGTATATACT	NA	False	NA	NA	False	NA	NA	NA	79048106	79046167	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr7_-_79046493_79047383_79047501_79047892
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116238	chr7	+	214	1	Intergenic	novelGene_398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTACATACTTGAAGCTAT	NA	False	NA	NA	False	NA	NA	NA	79112534	79112748	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr7_+_79112500_79112700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116249	chr7	-	2244	3	FSM	ENSMUSG00000030545.10	ENSMUST00000032761.8	2241	3	-3	0	-3	0	multi-exon	TRUE	canonical	3	20	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCGTCTGTGAGTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	79392831	79385704	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_79387659_79389912_79390029_79392657
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116328	chr7	-	799	6	FSM	ENSMUSG00000030538.16	ENSMUST00000123279.8	627	6	49	-221	49	0	multi-exon	FALSE	canonical	3	721	junction_2	53.1887206087907	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCCTTGTATGATGGT	2418	False	NA	-12	True	AATAAA	-15	NA	79882194	79876906	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79880063_79880173_79882091
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116392	chr7	+	1010	4	NNC	ENSMUSG00000030532.7	novel	1510	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	46.7784375778224	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTTCTTCCTTCTCTG	NA	False	NA	17	True	AATAAA	-22	NA	79992886	79995850	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_79992998_79993286_79993343_79993463_79993705_79995248
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116409	chr7	-	509	1	NIC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	12355	-27691	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGTTGTGGAATCAGAAA	NA	False	NA	NA	False	ATTAAA	-14	NA	80152085	80151576	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_80151600_80152100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116423	chr7	-	1454	7	NIC	ENSMUSG00000025722.17	novel	2114	8	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	46.1173021278951	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCAATTAGCAATTTACT	NA	False	NA	-5	True	AATAAA	-22	NA	80550982	80541006	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80550095_80550185_80550391_80550460_80550932
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116454	chr7	-	932	6	NIC	ENSMUSG00000025724.13	novel	1345	6	NA	NA	-13	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	398.541641488063	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCAGTGTTTGTATTTT	1607	False	NA	-8	True	ATTAAA	-14	NA	80597306	80565310	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_80565653_80565922_80565981_80572848_80572964_80577484_80577635_80584774_80584885_80597149
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116458	chr7	-	887	3	ISM	ENSMUSG00000025724.13	ENSMUST00000136556.2	2927	4	180	6376	-17	-6376	5prime_fragment	FALSE	canonical	3	953	junction_1	10	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGATCTTTACTTCTCA	1603	False	NA	NA	False	NA	NA	NA	80597310	80577018	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_80577635_80584774_80584885_80597149
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116463	chr7	+	155	1	ISM	ENSMUSG00000005621.12	ENSMUST00000107353.3	7297	10	48884	2445	4550	1266	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGGCTCTTGTATTCCTC	NA	False	NA	14	True	AATAAA	-19	NA	80692312	80692467	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_80692300_80692500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116531	chr7	-	1768	2	ISM	ENSMUSG00000061787.16	ENSMUST00000156346.2	673	4	223	-685	215	0	intron_retention	FALSE	canonical	3	13378	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTATTGTTCTTGC	NA	False	NA	-9	True	AATAAA	-13	NA	80994757	80992479	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_80993549_80994058
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116540	chr7	-	470	5	NNC	ENSMUSG00000061787.16	novel	494	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5323.36582318931	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGTATTGTTCTTG	NA	False	NA	-10	True	AATAAA	-12	NA	80994982	80992480	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_80992598_80993482_80993536_80994049_80994165_80994604_80994757_80994949
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116570	chr7	+	813	5	NIC	ENSMUSG00000097277.8	novel	720	4	NA	NA	22	4	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	35.5457451743524	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGGTATTATGTTTT	NA	False	NA	12	True	AATAAA	-17	NA	81173340	81181250	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_81173425_81178534_81178689_81178904_81179007_81179094_81179276_81180958
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116580	chr7	+	1461	3	FSM	ENSMUSG00000038646.14	ENSMUST00000042166.11	1452	3	-2	-7	-2	7	multi-exon	FALSE	canonical	3	441	junction_1	195	2264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGACAGCCCATTTATT	NA	False	NA	NA	False	AATAAA	-37	NA	81412670	81419246	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_81412805_81417274_81417472_81418116
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116652	chr7	+	1081	5	NNC	ENSMUSG00000038563.15	novel	3610	20	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	60.1139542868376	32	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTGGCCTGTGGCTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	82297824	82308234	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_82297887_82298733_82298840_82301088_82301157_82307264_82307350_82307474
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116661	chr7	-	828	2	Antisense	novelGene_ENSMUSG00000109335.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGTGTAATATGTATATT	NA	False	NA	NA	False	NA	NA	NA	82886619	82880836	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr7_-_82881455_82886409
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116666	chr7	+	1193	6	NNC	ENSMUSG00000046027.18	novel	2832	7	NA	NA	0	-1212	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	71.3649774048868	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTTGTGATCTCTTCCAT	NA	False	NA	37	True	TTTAAA	-39	NA	83281207	83290324	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_83281348_83281943_83281994_83282337_83282471_83285958_83286077_83286811_83286906_83289666
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116720	chr7	-	1553	7	FSM	ENSMUSG00000030629.16	ENSMUST00000178385.9	1538	7	-4	-11	0	11	multi-exon	FALSE	canonical	3	57	junction_6	230.002475832085	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTTTCCCTCTTCTTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	84328604	84264250	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84328517
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116730	chr7	-	1216	2	FSM	ENSMUSG00000030629.16	ENSMUST00000209140.2	1235	2	557	-538	557	9	multi-exon	FALSE	canonical	3	652	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTTTCCCTCTTCTTT	8210	False	NA	NA	False	AATAAA	-22	NA	84267349	84264252	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_84265177_84267057
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116738	chr7	-	299	1	Intergenic	novelGene_399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTCTGTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	85575974	85575675	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr7_-_85575700_85576000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116740	chr7	-	301	1	Intergenic	novelGene_400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTCTGTGGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	85582703	85582402	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr7_-_85582400_85582700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116743	chr7	+	194	1	Intergenic	novelGene_401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGTCACTGAATGATAAT	NA	False	NA	NA	False	NA	NA	NA	86465559	86465753	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr7_+_86465600_86465800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116760	chr7	+	1331	2	Antisense	novelGene_ENSMUSG00000069972.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACCCATTTCTAAACATAAA	NA	False	NA	NA	False	NA	NA	NA	88097835	88180133	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr7_+_88098541_88179507
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116765	chr7	-	556	1	FSM	ENSMUSG00000069972.7	ENSMUST00000182017.2	453	1	-27	-76	-27	76	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCGTGCCCCTCAACAGA	NA	False	NA	NA	False	NA	NA	NA	88180133	88179577	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_88179600_88180100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116781	chr7	-	848	4	FSM	ENSMUSG00000062797.15	ENSMUST00000208357.2	806	4	-23	-19	-18	3	multi-exon	FALSE	canonical	3	430	junction_3	356.664485974642	2142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTAACCTTTTCGTTT	NA	False	NA	17	True	AATAAA	-36	NA	89590430	89567892	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89590176
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116801	chr7	-	763	4	NNC	ENSMUSG00000062797.15	novel	806	4	NA	NA	-2814	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	558.838676781293	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGTAACCTTTTCG	NA	False	NA	14	True	AATAAA	-33	NA	89593226	89567895	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_89568216_89569280_89569400_89572771_89572924_89593054
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116804	chr7	-	1213	6	FSM	ENSMUSG00000062797.15	ENSMUST00000078918.10	1053	6	-145	-15	-7	0	multi-exon	FALSE	canonical	3	19	junction_4	509.123403508422	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGTAACCTTTTCG	NA	False	NA	14	True	AATAAA	-33	NA	89590419	89567895	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89579527_89579669_89584934_89585173_89590176
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116826	chr7	-	1621	12	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	-65	2	combination_of_known_junctions	FALSE	canonical	3	461	junction_2	565.94251087883	396	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAGAAAGCTATTTACTT	NA	False	NA	0	True	AATAAA	-35	NA	89629832	89603859	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_89604272_89604738_89604813_89605551_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116875	chr7	-	765	5	NNC	ENSMUSG00000030615.13	novel	799	5	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	338.934359426719	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGTCTGCAACATTAAAA	1668	False	NA	NA	False	AATAAA	-14	NA	90106414	90099912	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_90100144_90100750_90100866_90101920_90102109_90104631_90104728_90106279
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116909	chr7	+	503	1	NIC	ENSMUSG00000030613.14	novel	1596	9	NA	NA	20643	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTGTAAATGTGTTAT	NA	False	NA	10	True	AATAAA	-18	NA	92230999	92231502	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_92231000_92231500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116936	chr7	-	657	2	NNC	ENSMUSG00000087412.5	novel	849	2	NA	NA	-24	22	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTACTGGCCTTTTAAG	NA	False	NA	0	True	AATAAA	-37	NA	92828876	92828167	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_92828469_92828520
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116944	chr7	+	138	1	Intergenic	novelGene_402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTGCATAAACCTTATA	NA	False	NA	NA	False	AGTAAA	-24	NA	94125097	94125235	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr7_+_94125100_94125200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116948	chr7	-	488	1	Intergenic	novelGene_403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTACCTCATGGAATTAT	NA	False	NA	NA	False	ATTAAA	-29	NA	95831979	95831491	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr7_-_95831500_95832000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116964	chr7	+	2015	13	FSM	ENSMUSG00000035704.18	ENSMUST00000098300.6	2039	13	0	24	0	-24	multi-exon	TRUE	canonical	3	93	junction_8	19.8289560996034	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAAGTGTTTTGGGTCCTT	NA	False	NA	39	True	TATAAA	-28	NA	97020812	97041368	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116967	chr7	+	993	8	ISM	ENSMUSG00000035704.18	ENSMUST00000098300.6	2039	13	9	8307	9	-7771	5prime_fragment	FALSE	canonical	3	115	junction_7	14.6175739911846	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTGTTTTGTGCGTGG	NA	False	NA	NA	False	NA	NA	NA	97020821	97033085	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116973	chr7	+	124	1	ISM	ENSMUSG00000035704.18	ENSMUST00000098300.6	2039	13	20430	26	1258	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAAAGTGTTTTGGGTCC	8413	False	NA	37	True	TATAAA	-26	NA	97041242	97041366	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_97041200_97041400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116980	chr7	+	628	3	NNC	ENSMUSG00000030647.9	novel	683	3	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1315	230	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCCTTTCCTGGTTCTGC	NA	False	NA	21	True	ATTAAA	-20	NA	97049259	97057009	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_97049565_97056072_97056217_97056830
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116990	chr7	+	590	3	NNC	ENSMUSG00000030647.9	novel	683	3	NA	NA	-26	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1082	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTGTTCCTTTCCTGGT	NA	False	NA	16	True	ATTAAA	-15	NA	97049283	97057004	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_97049565_97056086_97056217_97056825
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000116999	chr7	+	182	1	NIC	ENSMUSG00000030647.9	novel	683	3	NA	NA	7514	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTTCCTTTCCTGGTT	NA	False	NA	17	True	ATTAAA	-16	NA	97056823	97057005	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_97056800_97057000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117001	chr7	-	1124	2	FSM	ENSMUSG00000035686.9	ENSMUST00000043077.8	1277	2	160	-7	-51	7	multi-exon	FALSE	canonical	3	27	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTCTTTTATTTTTAT	NA	False	NA	1	True	ATTAAA	-22	NA	97066777	97062137	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_97062723_97066238
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117009	chr7	+	833	5	FSM	ENSMUSG00000025133.10	ENSMUST00000205481.2	885	5	53	-1	53	1	multi-exon	FALSE	canonical	3	426	junction_4	26.0708170182678	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCAGTATTGACATTTT	1043	False	NA	NA	False	NA	NA	NA	97130272	97145191	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117113	chr7	-	1780	6	FSM	ENSMUSG00000052396.8	ENSMUST00000064231.8	1780	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	4.4	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTCTTTTCTCTCTCC	NA	False	NA	-1	True	AATAAA	-20	NA	98887826	98868290	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_98869167_98871459_98871660_98872199_98872375_98872707_98872913_98881664_98881844_98887681
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117116	chr7	+	1364	3	FSM	ENSMUSG00000055407.15	ENSMUST00000127492.2	4920	3	877	2679	20	-2679	multi-exon	FALSE	canonical	3	32	junction_2	24	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACCGCACTTCCTTCTC	NA	False	NA	NA	False	AATAAA	-23	NA	98917572	98966880	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_98918521_98964895_98965110_98966678
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117130	chr7	-	334	1	Intergenic	novelGene_404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCCTTTCCCAGAGTTC	NA	False	NA	NA	False	AATAAA	-21	NA	99030473	99030139	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr7_-_99030100_99030500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117204	chr7	-	829	7	NNC	ENSMUSG00000030744.14	novel	1908	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6373.21573505523	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGACTGGATTGTGTCC	8422	False	NA	-34	True	AATAAA	-36	NA	99132858	99128088	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_99128159_99128480_99128678_99129082_99129271_99130899_99130989_99131467_99131562_99131776_99131908_99132798
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117397	chr7	+	1512	7	NIC	ENSMUSG00000033685.14	novel	742	4	NA	NA	-79	325	combination_of_known_junctions	TRUE	canonical	3	12	junction_1	173.154795871594	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCTTTCTCATATGTT	NA	False	NA	15	True	CATAAA	-17	NA	100145206	100148834	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_100145415_100145932_100146156_100146301_100146513_100147284_100147480_100147554_100147657_100147942_100148124_100148442
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117425	chr7	+	743	1	NIC	ENSMUSG00000044881.8	novel	1391	2	NA	NA	1838	33	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAAGTGCCTCTATCTTTC	9541	False	NA	29	True	AATAAA	-38	NA	100188276	100189019	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_100188300_100189000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117475	chr7	+	186	1	Intergenic	novelGene_405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTACATGAGATTTAAATA	NA	False	NA	NA	False	NA	NA	NA	100633169	100633355	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr7_+_100633200_100633400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117488	chr7	+	991	2	Genic_Genomic	ENSMUSG00000110099.2	novel	341	1	NA	NA	-183521	41	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAGACAGACAGACAGAAA	NA	False	NA	NA	False	NA	NA	NA	100803812	100987715	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_+_100804385_100987296
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117497	chr7	+	344	1	NIC	ENSMUSG00000001829.18	novel	4627	16	NA	NA	23897	36	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCCTCTCCTGCCTTTCT	NA	False	NA	14	True	NA	NA	NA	101436709	101437053	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_101436700_101437100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117501	chr7	+	870	2	Genic_Genomic	ENSMUSG00000110295.2_ENSMUSG00000110360.2	novel	318	1	NA	NA	-22	40	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCGTGGTGGCACATGC	NA	False	NA	NA	False	AATAAA	-13	NA	101439720	101502523	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_+_101440182_101502114
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117513	chr7	-	278	1	ISM	ENSMUSG00000001827.13	ENSMUST00000106981.8	960	4	5537	0	5537	0	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGTGTGAATGAGAATG	NA	False	NA	0	True	AATAAA	-31	NA	101507815	101507537	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_101507500_101507800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117528	chr7	-	1035	5	FSM	ENSMUSG00000001827.13	ENSMUST00000106982.8	1039	5	-10	14	-10	-14	multi-exon	FALSE	canonical	3	16	junction_4	136.80711787038	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTATGAATTATTTGGG	4826	False	NA	-14	True	AATAAA	-17	NA	101516624	101507551	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101516484
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117549	chr7	+	889	6	NIC	ENSMUSG00000030649.19	novel	836	6	NA	NA	-18	1	combination_of_known_junctions	FALSE	canonical	3	98	junction_2	189.568562794573	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTATTCCCTGTTTGTTG	7731	False	NA	26	True	AATAAA	-26	NA	101545528	101548752	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_101545658_101546939_101547025_101547153_101547279_101547760_101547821_101548106_101548245_101548400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117557	chr7	+	918	4	ISM	ENSMUSG00000030649.19	ENSMUST00000106973.8	650	5	-47	-65	29	1	intron_retention	FALSE	canonical	3	48	junction_1	258.681700594035	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTATTCCCTGTTTGTTG	7778	False	NA	26	True	AATAAA	-26	NA	101545575	101548752	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_101545658_101547148_101547279_101547760_101547821_101548106
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117580	chr7	+	829	6	NNC	ENSMUSG00000030649.19	novel	2797	5	NA	NA	-113	1	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	204.430330430687	154	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTATTCCCTGTTTGTTG	8159	False	NA	26	True	AATAAA	-26	NA	101545956	101548752	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_101546021_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117581	chr7	+	824	6	NNC	ENSMUSG00000030649.19	novel	2797	5	NA	NA	-113	1	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	241.06480456508	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTATTCCCTGTTTGTTG	8159	False	NA	26	True	AATAAA	-26	NA	101545956	101548752	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_101546021_101546939_101547025_101547153_101547279_101547760_101547821_101548106_101548245_101548400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117596	chr7	+	806	6	NNC	ENSMUSG00000030649.19	novel	2797	5	NA	NA	40	1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	243.967702780512	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTATTCCCTGTTTGTTG	8410	False	NA	26	True	AATAAA	-26	NA	101546207	101548752	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_101546254_101546939_101547025_101547153_101547279_101547760_101547821_101548106_101548245_101548400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117610	chr7	+	426	1	FSM	ENSMUSG00000030842.13	ENSMUST00000211180.2	1936	1	-339	1849	-339	0	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTCTGTCCTGCCCACT	NA	False	NA	28	True	GATAAA	-32	NA	101560684	101561110	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_101560700_101561100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117622	chr7	+	282	1	ISM	ENSMUSG00000066306.14	ENSMUST00000084852.13	7180	25	44857	5	13263	4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGCTCTTTGGGTCA	119	False	NA	32	True	AATAAA	-20	NA	101663884	101664166	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_101663900_101664200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117653	chr7	+	2024	7	FSM	ENSMUSG00000030990.19	ENSMUST00000156529.8	2034	7	7	3	7	-3	multi-exon	FALSE	canonical	3	53	junction_5	43.1689188601655	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGGTAGGTATGTTGC	601	False	NA	13	True	AATAAA	-20	NA	101872241	101887771	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_101872358_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885750_101886328_101886438_101886607
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117661	chr7	+	1896	6	NIC	ENSMUSG00000030990.19	novel	1201	7	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	55.9692772867401	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGGTAGGTATGTTGC	629	False	NA	13	True	AATAAA	-20	NA	101872269	101887771	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_101872358_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117671	chr7	-	1193	1	NIC	ENSMUSG00000073982.12	novel	1321	3	NA	NA	9773	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCTCCCTATGTG	6717	False	NA	-2	True	AATAAA	-18	NA	101889522	101888329	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_101888300_101889500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117683	chr7	+	542	1	ISM	ENSMUSG00000030978.11	ENSMUST00000033283.10	3997	19	26700	835	4673	254	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACTTGTCATCTATTAT	NA	False	NA	NA	False	AATAAA	-24	NA	102117601	102118143	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_102117600_102118100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117712	chr7	-	2643	14	FSM	ENSMUSG00000037032.17	ENSMUST00000189378.7	2878	14	254	-19	41	0	multi-exon	FALSE	canonical	3	117	junction_6	14.1718113410527	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTCCTGTGCTCA	NA	False	NA	-23	True	AATAAA	-16	NA	105230444	105207690	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105214855_105215257_105215386_105215754_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105230341
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117743	chr7	+	232	1	ISM	ENSMUSG00000089847.9	ENSMUST00000106783.8	3273	3	1562	1788	501	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTCTTGTCTTCAGAG	NA	False	NA	NA	False	AATAAA	-17	NA	105290824	105291056	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_105290800_105291100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117769	chr7	-	2423	13	NNC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	93.1952475540822	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTGAGTGATTTTT	NA	False	NA	1	True	AATAAA	-27	NA	105401414	105395128	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396861_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117774	chr7	-	1256	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	-66	6110	-66	341	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	7845	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTCAGTTTGCTTAT	NA	False	NA	0	True	NA	NA	NA	105460372	105458522	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_105459352_105459656_105459726_105460014
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117802	chr7	-	730	2	Intergenic	novelGene_406	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	0	96	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTTATCATCCTGTTT	NA	False	NA	NA	False	TTTAAA	-20	NA	106838198	106836766	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr7_-_106837208_106837909
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117811	chr7	+	1122	5	NNC	ENSMUSG00000057215.7	novel	1294	6	NA	NA	-12	-4398	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	14.7880864211703	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTTTGTCCCACATT	NA	False	NA	16	True	AATAAA	-23	NA	106842216	106895205	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_106842336_106883988_106884145_106884819_106884938_106891710_106891844_106894609
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117816	chr7	+	117	1	Intergenic	novelGene_407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTGTGTTTGTCCCA	NA	False	NA	12	True	AATAAA	-19	NA	106895084	106895201	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr7_+_106895100_106895200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117831	chr7	-	504	1	FSM	ENSMUSG00000109484.2	ENSMUST00000207291.2	357	1	-94	-53	-94	53	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGTCTTCTGTTG	NA	False	NA	NA	False	NA	NA	NA	107693786	107693282	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_107693300_107693800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117884	chr7	+	509	5	NNC	ENSMUSG00000046364.15	novel	1158	5	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6450.62482923166	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGCATCCTTCCTTGT	NA	False	NA	8	True	ATTAAA	-20	NA	109118402	109120979	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_109118430_109118791_109118856_109119129_109119201_109119674_109119850_109120807
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117898	chr7	+	768	5	NIC	ENSMUSG00000046364.15	novel	1158	5	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	6920.42061582965	635	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCATCCTTCCTTGTC	NA	False	NA	9	True	ATTAAA	-21	NA	109118402	109120980	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_109118683_109118791_109118856_109119124_109119201_109119674_109119850_109120807
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117919	chr7	+	567	5	NNC	ENSMUSG00000046364.15	novel	526	4	NA	NA	5	6	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	6916.63004558578	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGCATCCTTCCTTGT	NA	False	NA	8	True	ATTAAA	-20	NA	109118431	109120979	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_109118512_109118791_109118856_109119124_109119201_109119674_109119850_109120807
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000117964	chr7	+	1262	5	NNC	ENSMUSG00000031023.6	novel	1028	6	NA	NA	48	-3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	171.1906831577	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCATTTTATTGCTATT	NA	False	NA	NA	False	AATAAA	-22	NA	109303006	109311393	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_109303556_109304157_109304239_109306604_109306719_109308147_109308229_109310956
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118015	chr7	+	312	1	ISM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	61416	68	61372	-68	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTTCTATTTTTTT	NA	False	NA	9	True	ATTAAA	-16	NA	109882333	109882645	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_109882300_109882600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118030	chr7	+	1309	4	ISM	ENSMUSG00000005609.17	ENSMUST00000005749.6	4300	25	23429	0	1387	0	3prime_fragment	FALSE	canonical	3	158	junction_3	15.6276108929747	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTGCCTGTGTGTCCTCT	NA	False	NA	31	True	AATAAA	-17	NA	110651586	110655584	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_110651667_110652588_110652686_110653020_110653134_110654565
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118038	chr7	-	3689	21	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	-3	0	-1	0	intron_retention	FALSE	canonical	3	1102	junction_8	1132.63140517999	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682227	110671138	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118048	chr7	+	2031	7	ISM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	78970	0	11768	0	3prime_fragment	FALSE	canonical	3	328	junction_6	26.9485105752103	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTATCTTAGTCATT	NA	False	NA	4	True	AATAAA	-16	NA	111701680	111710591	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118097	chr7	-	994	1	Genic_Genomic	ENSMUSG00000030751.19	novel	NA	NA	NA	NA	10579	152	mono-exon	FALSE	NA	NA	NA	NA	NA	685	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTATGTAGACTGGCT	NA	False	NA	NA	False	AATAAA	-17	NA	113864682	113863688	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_-_113863700_113864700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118122	chr7	-	1147	10	NNC	ENSMUSG00000030751.19	novel	1201	10	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	887.193202057916	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTCAAGTTTTTGTT	NA	False	NA	-2	True	AATAAA	-15	NA	113875297	113863842	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873042_113873151_113873260_113873363_113873650_113873696_113875235
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118125	chr7	-	1085	10	NNC	ENSMUSG00000030751.19	novel	1201	10	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	884.701846965796	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTCAAGTTTTTGTT	NA	False	NA	-2	True	AATAAA	-15	NA	113875295	113863842	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869030_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118128	chr7	-	1138	10	NNC	ENSMUSG00000030751.19	novel	1201	10	NA	NA	-6	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	1090.06514699414	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTCAAGTTTTTGTT	NA	False	NA	-2	True	AATAAA	-15	NA	113875295	113863842	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873358_113873650_113873696_113875233
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118169	chr7	+	1274	1	ISM	ENSMUSG00000030671.10	ENSMUST00000032909.9	6573	16	121383	1314	14930	-1314	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAACTTGCGTTTATATAA	NA	False	NA	9	True	AATAAA	-19	NA	114135898	114137172	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_114135900_114137200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118178	chr7	-	1023	2	FSM	ENSMUSG00000030669.14	ENSMUST00000205560.2	568	2	-365	-90	-365	0	multi-exon	FALSE	canonical	3	95	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGAGTCTTTGCTGTTACT	5381	False	NA	0	True	ATTAAA	-27	NA	114232245	114230712	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_114231141_114231650
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118188	chr7	-	887	4	FSM	ENSMUSG00000030669.14	ENSMUST00000032907.9	830	4	-49	-8	-4	8	multi-exon	FALSE	canonical	3	6	junction_1	40.2022663816634	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGGTGGTCATTGATCTA	2030	False	NA	NA	False	AATAAA	-24	NA	114235596	114232519	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_114233021_114233702_114233844_114234361_114234457_114235446
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118203	chr7	-	195	2	Intergenic	novelGene_408	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAAGCTTTAAAAATCCT	9325	False	NA	NA	False	NA	NA	NA	115713414	115685283	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr7_-_115685456_115713391
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118206	chr7	+	1505	5	FSM	ENSMUSG00000030663.13	ENSMUST00000032899.12	1479	5	-21	-5	-21	5	multi-exon	FALSE	canonical	3	1664	junction_2	78.2527954772224	4834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATGCCTTTATCCTCA	NA	False	NA	34	True	AATAAA	-25	NA	115692514	115704450	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_115692761_115698674_115698759_115701178_115701240_115702445_115702556_115703446
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118210	chr7	+	1204	3	FSM	ENSMUSG00000030663.13	ENSMUST00000106607.2	1153	3	-48	-3	-8	0	multi-exon	FALSE	canonical	3	76	junction_1	845.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTGTGATGCCTTTAT	NA	False	NA	29	True	AATAAA	-20	NA	115692527	115704445	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_115692623_115702445_115702556_115703446
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118215	chr7	+	1468	5	NNC	ENSMUSG00000030663.13	novel	1479	5	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	758.133357332336	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTGTGATGCCTTTAT	NA	False	NA	29	True	AATAAA	-20	NA	115692542	115704445	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_115692761_115698674_115698759_115701178_115701240_115702445_115702556_115703450
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118237	chr7	+	1001	1	NIC	ENSMUSG00000030663.13	novel	1479	5	NA	NA	10844	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTGTGATGCCTTTAT	NA	False	NA	29	True	AATAAA	-20	NA	115703444	115704445	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_115703400_115704400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118241	chr7	-	952	1	ISM	ENSMUSG00000045659.19	ENSMUST00000182834.8	5257	25	113374	2	5087	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGCTCTTGCTGGCTGT	1334	False	NA	0	True	ATTAAA	-19	NA	115723673	115722721	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_115722700_115723700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118271	chr7	-	541	6	NNC	ENSMUSG00000090862.4	novel	589	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	4778.35546605733	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTTTTGTGGTTCTT	NA	False	NA	-5	True	AATAAA	-15	NA	115933370	115930744	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_115930819_115931613_115931715_115932163_115932351_115932930_115933010_115933134_115933184_115933319
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118280	chr7	-	536	6	NNC	ENSMUSG00000090862.4	novel	589	6	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	1	42	junction_1	5114.92713535589	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTTTTGTGGTTCTT	NA	False	NA	-5	True	AATAAA	-15	NA	115933388	115930744	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_115930819_115931613_115931709_115932163_115932334_115932930_115933010_115933134_115933184_115933319
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118290	chr7	-	569	6	NNC	ENSMUSG00000090862.4	novel	589	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5126.34304743645	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTTTTGTGGTTCTT	NA	False	NA	-5	True	AATAAA	-15	NA	115933370	115930744	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_115930819_115931613_115931760_115932163_115932334_115932930_115933010_115933134_115933184_115933319
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118369	chr7	-	439	5	NNC	ENSMUSG00000008683.17	novel	5179	5	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4270.61149017328	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	False	NA	-33	True	AATAAA	-19	NA	117715383	117708286	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_117708417_117709155_117709222_117714007_117714088_117714331_117714470_117715358
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118370	chr7	-	443	5	NNC	ENSMUSG00000008683.17	novel	5179	5	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3600.67732343513	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	False	NA	-33	True	AATAAA	-19	NA	117715383	117708286	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_117708417_117709155_117709242_117714007_117714088_117714347_117714470_117715358
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118375	chr7	-	777	6	NNC	ENSMUSG00000008683.17	novel	5179	5	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	1	126	junction_2	4662.78583681473	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	False	NA	-33	True	AATAAA	-19	NA	117715383	117708286	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_117708417_117709155_117709242_117711545_117711864_117714007_117714088_117714331_117714470_117715358
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118377	chr7	-	379	4	NIC	ENSMUSG00000008683.17	novel	5179	5	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	1	50	junction_2	3923.91168209593	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	False	NA	-33	True	AATAAA	-19	NA	117715383	117708286	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_117708417_117709155_117709242_117714331_117714470_117715358
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118379	chr7	-	469	5	NNC	ENSMUSG00000008683.17	novel	5179	5	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3600.67732343513	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	False	NA	-33	True	AATAAA	-19	NA	117715383	117708286	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_117708417_117709155_117709242_117714007_117714088_117714321_117714470_117715358
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118400	chr7	-	447	5	NNC	ENSMUSG00000008683.17	novel	5179	5	NA	NA	28	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	4166.02163340518	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCAGGGTCAGTCCTTTT	NA	False	NA	-35	True	AATAAA	-17	NA	117715383	117708288	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_117708417_117709165_117709242_117714007_117714088_117714331_117714470_117715358
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118405	chr7	-	2439	6	FSM	ENSMUSG00000030654.10	ENSMUST00000032888.10	2171	6	37	-305	37	305	multi-exon	FALSE	canonical	3	2173	junction_1	168.469106960297	2826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTTGAAATTGCTGACT	NA	False	NA	-8	True	AGTAAA	-14	NA	117728848	117717808	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118412	chr7	-	679	6	NNC	ENSMUSG00000030654.10	novel	2171	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	936.632393204506	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTAGTGTGGCTGCCGCG	NA	False	NA	NA	False	GATAAA	-31	NA	117728797	117719521	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726352_117726491_117728691
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118423	chr7	+	197	1	Intergenic	novelGene_409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATGGTGAATGGACATG	NA	False	NA	NA	False	NA	NA	NA	117825840	117826037	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr7_+_117825800_117826000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118431	chr7	-	888	6	NNC	ENSMUSG00000030652.12	novel	914	6	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	385.750904081896	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTGGTTTTCTTGTGCT	6653	False	NA	-2	True	AATAAA	-16	NA	118132551	118124284	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_118124518_118125046_118125116_118126557_118126700_118127526_118127642_118128781_118128961_118132401
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118432	chr7	-	894	6	NNC	ENSMUSG00000030652.12	novel	914	6	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	385.750904081896	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTGGTTTTCTTGTGCT	6675	False	NA	-2	True	AATAAA	-16	NA	118132529	118124284	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_118124518_118125046_118125116_118126529_118126700_118127526_118127642_118128781_118128961_118132401
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118444	chr7	-	234	1	FSM	ENSMUSG00000030652.12	ENSMUST00000207046.2	2733	1	1439	1060	1439	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTGGTTTTCTTGTGCT	5077	False	NA	-2	True	AATAAA	-16	NA	118124518	118124284	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_118124300_118124500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118457	chr7	-	1591	6	FSM	ENSMUSG00000033917.16	ENSMUST00000038791.15	1582	6	-9	0	-9	0	multi-exon	TRUE	canonical	3	428	junction_5	40.804901666344	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTACTGATCTTCTGGT	NA	False	NA	3	True	AATAAA	-28	NA	118305010	118287767	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_118288374_118290805_118291018_118293715_118293809_118294258_118294365_118297777_118297954_118304612
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118469	chr7	+	1227	1	ISM	ENSMUSG00000033904.17	ENSMUST00000106557.8	5073	16	23246	0	5547	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTGGATCTCTTTTAG	5561	False	NA	10	True	AATAAA	-20	NA	118335020	118336247	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_118335000_118336200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118476	chr7	+	922	9	ISM	ENSMUSG00000030982.20	ENSMUST00000129334.8	1552	15	11	17509	-4	2	5prime_fragment	FALSE	canonical	3	302	junction_1	101.623616226741	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTTGAAGTCTGGTTGT	NA	False	NA	NA	False	AAGAAA	-1	NA	118339965	118365769	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118518	chr7	-	1929	1	ISM	ENSMUSG00000030942.9	ENSMUST00000033236.9	2689	4	3777	0	3743	0	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCATTCTTTTTTATT	NA	False	NA	-1	True	AATAAA	-20	NA	119316244	119314315	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_119314300_119316200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118543	chr7	+	1031	4	FSM	ENSMUSG00000030922.13	ENSMUST00000208202.2	936	4	-9	-86	0	0	multi-exon	FALSE	canonical	3	11	junction_1	24.5356882927706	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTTTGTTGATTTT	NA	False	NA	12	True	TATAAA	-23	NA	119495083	119515979	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_119495114_119508893_119509186_119513395_119513489_119515363
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118569	chr7	+	1878	14	FSM	ENSMUSG00000030884.13	ENSMUST00000033176.7	1896	14	24	-6	24	6	multi-exon	FALSE	canonical	3	1087	junction_9	72.1248916810278	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTCAGCTGGTTCCTTC	NA	False	NA	28	True	AGTAAA	-20	NA	120234422	120258753	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118576	chr7	+	223	1	ISM	ENSMUSG00000030884.13	ENSMUST00000033176.7	1896	14	23880	246	7776	-246	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGCATTCTTTCTAAG	NA	False	NA	23	True	AATAAA	-19	NA	120258278	120258501	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_120258300_120258500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118585	chr7	+	533	1	NIC	ENSMUSG00000046096.8	novel	812	4	NA	NA	-33	3	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTAGGTGAAGGCAGTC	NA	False	NA	15	True	AATAAA	-21	NA	120325365	120325898	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_120325400_120325900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118602	chr7	+	867	2	NNC	ENSMUSG00000030876.8	novel	1823	5	NA	NA	-18051	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_1	0	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCACCATGTTCTTCT	NA	False	NA	7	True	AATAAA	-16	NA	120656458	120676058	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_120656623_120675355
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118614	chr7	-	853	1	ISM	ENSMUSG00000030872.15	ENSMUST00000124566.2	4251	18	31554	2039	9436	4	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTTGAGTCCACAGG	1022	False	NA	-1	True	AATAAA	-18	NA	121588836	121587983	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_121588000_121588800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118620	chr7	-	2014	9	FSM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	199	-167	6	167	multi-exon	FALSE	canonical	3	113	junction_5	13.5317912709294	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTGCGTCATTACCAAG	NA	False	NA	1	True	NA	NA	NA	121666287	121637876	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118654	chr7	-	667	5	FSM	ENSMUSG00000030869.12	ENSMUST00000106471.9	552	5	-115	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	2300.90270328843	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTTCTCAATTAGTTT	6393	False	NA	-11	True	AATAAA	-16	NA	121701074	121690053	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_121690213_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118666	chr7	+	1538	6	FSM	ENSMUSG00000030868.7	ENSMUST00000033156.5	1532	6	-2	-4	-2	4	multi-exon	FALSE	canonical	3	258	junction_5	42.3008274150755	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGGCTCATTCATTAAAG	NA	False	NA	18	True	AATAAA	-19	NA	121732261	121748271	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_121732405_121733391_121733461_121734274_121734394_121737470_121737583_121743007_121743111_121747279
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118673	chr7	+	600	5	NNC	ENSMUSG00000030868.7	novel	1532	6	NA	NA	8	-6351	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	149.087851617763	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGCAGCATACTTTTT	NA	False	NA	NA	False	NA	NA	NA	121732284	121741453	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_121732405_121733391_121733461_121734274_121734394_121737470_121737583_121741273
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118748	chr7	-	186	1	ISM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	23767	4	10730	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGGCTTGTGTGAGGTT	NA	False	NA	-15	True	AGTAAA	-29	NA	125067001	125066815	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_125066800_125067000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118751	chr7	-	960	8	NNC	ENSMUSG00000030750.14	novel	1120	8	NA	NA	-44	-4	at_least_one_novel_splicesite	FALSE	canonical	1	25	junction_1	375.746386461368	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGGCTTGTGTGAGGTT	NA	False	NA	-15	True	AGTAAA	-29	NA	125090615	125066815	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_125067013_125067450_125067572_125068200_125068318_125070284_125070432_125071046_125071125_125071279_125071402_125085509_125085657_125090584
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118828	chr7	-	172	1	NIC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	19122	-456	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTTGCTTGTTGTCTGC	NA	False	NA	-8	True	ATTAAA	-18	NA	126146254	126146082	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_126146100_126146300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118835	chr7	-	1679	15	FSM	ENSMUSG00000030720.17	ENSMUST00000032962.11	2386	15	21	686	0	0	multi-exon	FALSE	canonical	3	116	junction_11	19.7815880173912	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126182398	126171257	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118842	chr7	-	831	3	FSM	ENSMUSG00000030717.10	ENSMUST00000032961.4	829	3	10	-12	10	12	multi-exon	FALSE	canonical	3	3716	junction_2	16	7196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTGCCTTTGTTTTG	NA	False	NA	4	True	AATAAA	-28	NA	126224838	126222408	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_126222752_126224061_126224206_126224494
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118878	chr7	-	673	1	FSM	ENSMUSG00000066175.3	ENSMUST00000084587.2	348	1	-11	-314	-11	314	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTAGCTACATCTTTGGA	NA	False	NA	NA	False	AATAAA	-18	NA	126248753	126248080	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_126248100_126248800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118884	chr7	+	1414	9	ISM	ENSMUSG00000030714.15	ENSMUST00000032956.10	1312	10	3	146	0	0	intron_retention	FALSE	canonical	3	419	junction_3	30.3840007240653	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTCCTGGGCCTCAC	114	False	NA	33	True	AATAAA	-16	NA	126248483	126271951	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_126248650_126260223_126260321_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118885	chr7	+	1166	9	NNC	ENSMUSG00000030714.15	novel	1312	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	157.604528805488	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTCCTGGGCCTCAC	114	False	NA	33	True	AATAAA	-16	NA	126248483	126271951	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_126248650_126260223_126260321_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271092_126271327_126271491_126271741
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118952	chr7	+	478	2	FSM	ENSMUSG00000063065.14	ENSMUST00000206875.2	436	2	-40	-2	19	2	multi-exon	FALSE	canonical	3	217	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAGCAAAGTAACTTTTT	5235	False	NA	NA	False	NA	NA	NA	126358791	126360181	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_126358991_126359902
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118978	chr7	-	431	1	Genic_Genomic	ENSMUSG00000030697.8	novel	NA	NA	NA	NA	1047	4	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGTCAGGTTTGATTG	NA	False	NA	NA	False	AATAAA	-19	NA	126385464	126385033	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_-_126385000_126385500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000118986	chr7	-	1422	8	NNC	ENSMUSG00000030697.8	novel	1359	9	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	1	118	junction_5	848.091037662388	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGGTTCTGTCAGGTTTG	5202	False	NA	NA	False	AATAAA	-15	NA	126391536	126385037	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387387_126387555_126387607_126388195_126388248_126391232
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119001	chr7	-	1352	9	NNC	ENSMUSG00000030697.8	novel	1359	9	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	75	junction_2	839.978041007621	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTAGGTTCTGTCAGGTT	5066	False	NA	NA	False	AATAAA	-13	NA	126391672	126385039	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_126385464_126385543_126385725_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232_126391396_126391594
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119014	chr7	-	1446	9	NNC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	6715.62710679353	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	126398356	126394405	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396810_126396949_126398216
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119015	chr7	-	1436	9	NNC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	144	junction_8	6677.90096956933	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	126398356	126394405	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396944_126398216
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119017	chr7	-	1438	9	NNC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	6695.59761615795	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	126398357	126394405	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396077_126396508_126396721_126396815_126396949_126398216
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119021	chr7	-	1435	9	NNC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	6725.38012750023	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	126398357	126394405	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126398223
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119033	chr7	-	1348	9	NIC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	287	junction_8	6630.75357708308	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	126399220	126394405	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126399173
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119118	chr7	-	1002	6	FSM	ENSMUSG00000060538.15	ENSMUST00000032926.12	941	6	-5	-56	0	7	multi-exon	FALSE	canonical	3	26	junction_5	14.8781719307178	257	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTTGACGTAAAAGAATT	6214	False	NA	54	True	ATTAAA	-21	NA	126497453	126485335	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_126485488_126488062_126488233_126490774_126491005_126495920_126496111_126496197_126496400_126497395
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119175	chr7	-	1728	4	FSM	ENSMUSG00000030674.6	ENSMUST00000032912.6	2050	4	172	150	-13	-150	multi-exon	FALSE	canonical	3	73	junction_2	9.46337971105226	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTGTTGTTGT	NA	False	NA	-2	True	NA	NA	NA	126721226	126706435	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_126707414_126707505_126707638_126707880_126708417_126721144
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119235	chr7	+	778	6	ISM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	1085	0	14	0	3prime_fragment	FALSE	canonical	3	600	junction_1	477.333007448678	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTGTGTTCATGCGCA	4045	False	NA	42	True	AATAAA	-34	NA	126811864	126813470	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119251	chr7	+	379	3	ISM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	1949	10	-339	0	3prime_fragment	FALSE	canonical	3	1768	junction_2	5	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	52	False	NA	32	True	AATAAA	-24	NA	126812728	126813460	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_126812861_126813106_126813156_126813262
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119258	chr7	+	200	1	NIC	ENSMUSG00000030672.13	novel	653	7	NA	NA	193	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	584	False	NA	32	True	AATAAA	-24	NA	126813260	126813460	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_126813300_126813500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119266	chr7	-	1138	8	NNC	ENSMUSG00000000486.14	novel	1285	10	NA	NA	-550	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	119.199712367822	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCGGAGTCTTCTTCCC	NA	False	NA	-2	True	AATAAA	-23	NA	126816761	126813613	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126815980_126816072_126816208_126816735
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119305	chr7	-	796	4	NNC	ENSMUSG00000042462.5	novel	676	3	NA	NA	-8007	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1847.25405820519	14014	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTTGAGTAGCTAGA	8180	False	NA	6	True	AATAAA	-25	NA	126867888	126856123	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_126856509_126858529_126858641_126859694_126859937_126867830
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119317	chr7	-	380	1	Genic_Genomic	ENSMUSG00000042462.5	novel	NA	NA	NA	NA	3373	2	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGATTTTTCTTGAGTAG	5863	False	NA	1	True	AATAAA	-20	NA	126856508	126856128	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_-_126856100_126856500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119333	chr7	-	454	1	ISM	ENSMUSG00000047371.8	ENSMUST00000060783.7	2356	2	2175	0	2175	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTCGTCCTTAAGATGT	7496	False	NA	-1	True	AATAAA	-16	NA	126942420	126941966	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_126942000_126942400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119344	chr7	-	919	2	FSM	ENSMUSG00000045251.14	ENSMUST00000126756.2	338	2	-198	-383	-9	4	multi-exon	FALSE	canonical	3	21	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTTTGTGTTAAGAAAAA	6904	False	NA	0	True	ATTAAA	-21	NA	127021220	127018134	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_127018814_127020980
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119352	chr7	-	682	1	Genic_Genomic	ENSMUSG00000045251.14	novel	NA	NA	NA	NA	2206	4	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTTTGTGTTAAGAAAAA	9308	False	NA	0	True	ATTAAA	-21	NA	127018816	127018134	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_-_127018100_127018800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119356	chr7	-	1192	3	NIC	ENSMUSG00000045251.14	novel	1302	4	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	12.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	6927	False	NA	-4	True	ATTAAA	-17	NA	127021197	127018138	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_127018814_127020576_127020691_127020794
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119379	chr7	+	2094	12	ISM	ENSMUSG00000030822.16	ENSMUST00000106292.8	2175	13	643	-1	-5	1	3prime_fragment	FALSE	canonical	3	60	junction_1	50.8389126685683	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGACTCCTTTGTGCCT	NA	False	NA	10	True	TATAAA	-15	NA	127070185	127075932	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_127070292_127071077_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119392	chr7	+	575	1	Intergenic	novelGene_410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTTCTTTTTTAATT	NA	False	NA	NA	False	AATAAA	-17	NA	127119333	127119908	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr7_+_127119300_127119900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119399	chr7	+	1610	10	FSM	ENSMUSG00000030815.12	ENSMUST00000033086.8	1570	10	-41	1	-17	1	multi-exon	FALSE	canonical	3	46	junction_3	31.2018517968975	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCATGTCTGCTGTCTAG	NA	False	NA	25	True	AATAAA	-26	NA	127172534	127182478	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_127172629_127173025_127173139_127176706_127176883_127177146_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119418	chr7	-	632	5	NNC	ENSMUSG00000030814.18	novel	1132	6	NA	NA	116	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	229.506399692906	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCATGTCATTTCC	NA	False	NA	NA	False	AATAAA	-14	NA	127307131	127304149	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_127304348_127304898_127304985_127306347_127306510_127306604_127306711_127307051
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119431	chr7	+	98	1	ISM	ENSMUSG00000042308.15	ENSMUST00000047075.14	6487	19	23355	0	21448	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGTCAGTATCTTTGG	1305	False	NA	17	True	ATTAAA	-17	NA	127399196	127399294	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_127399200_127399300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119451	chr7	-	510	1	ISM	ENSMUSG00000049728.15	ENSMUST00000054415.12	5768	3	10326	2946	9144	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTCTGTATTGTGGT	5206	False	NA	2	True	ATTAAA	-20	NA	127465674	127465164	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_127465200_127465700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119479	chr7	+	408	1	ISM	ENSMUSG00000030802.15	ENSMUST00000071056.14	3405	12	4119	1613	961	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGGCCCCAAATGTTG	NA	False	NA	28	True	ATTAAA	-20	NA	127507372	127507780	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_127507400_127507800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119526	chr7	+	1834	15	NNC	ENSMUSG00000030795.19	novel	5536	15	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	337.727036259178	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTCCCCCAGTTTAC	1180	False	NA	37	True	ATTAAA	-20	NA	127566658	127581204	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127571943_127573571_127573604_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119530	chr7	+	1834	15	FSM	ENSMUSG00000030795.19	ENSMUST00000077609.12	1831	15	-3	0	-3	0	multi-exon	FALSE	canonical	3	245	junction_3	273.376618440941	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTCCCCCAGTTTAC	1180	False	NA	37	True	ATTAAA	-20	NA	127566658	127581204	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_127566750_127568733_127568759_127568888_127569044_127571012_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119542	chr7	+	1098	9	NNC	ENSMUSG00000030795.19	novel	1831	15	NA	NA	802	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	410.560592361225	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTCCCCCAGTTTAC	6370	False	NA	37	True	ATTAAA	-20	NA	127571848	127581204	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_127571966_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119553	chr7	-	293	1	ISM	ENSMUSG00000030793.5	ENSMUST00000033056.5	3800	3	1485	2382	1145	-450	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTTTTTTTTTTAATT	NA	False	NA	2	True	NA	NA	NA	127591554	127591261	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_127591300_127591600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119609	chr7	+	696	1	FSM	ENSMUSG00000108608.2	ENSMUST00000205523.2	195	1	-50	-451	-50	307	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGTGGAGCCCACGTTAG	NA	False	NA	NA	False	NA	NA	NA	127942140	127942836	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_127942100_127942800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119613	chr7	-	716	3	FSM	ENSMUSG00000030844.12	ENSMUST00000134144.2	458	3	6	-264	6	0	multi-exon	FALSE	canonical	1	3	junction_2	8	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTAGTCATTTCTACTT	9757	False	NA	NA	False	ATTAAA	-24	NA	127995403	127975344	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_127975767_127990687_127990832_127995253
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119637	chr7	+	2616	4	FSM	ENSMUSG00000030847.9	ENSMUST00000033136.9	2562	4	-54	0	-54	0	multi-exon	FALSE	canonical	3	128	junction_2	8.2192186706253	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTTGTGGTTTCTAA	7088	False	NA	17	True	AATAAA	-22	NA	128125285	128148705	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_128125769_128141696_128142036_128143530_128143933_128147313
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119641	chr7	+	730	1	ISM	ENSMUSG00000030847.9	ENSMUST00000033136.9	2562	4	22636	0	22636	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTTGTGGTTTCTAA	532	False	NA	17	True	AATAAA	-22	NA	128147975	128148705	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_128148000_128148700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119645	chr7	-	196	1	ISM	ENSMUSG00000048170.15	ENSMUST00000057557.14	4237	16	42534	1325	1258	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTGTCCTTAACTTTT	NA	False	NA	-13	True	NA	NA	NA	128299685	128299489	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_128299500_128299700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119651	chr7	+	329	2	Intergenic	novelGene_411	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTGCATCTCTCTAC	NA	False	NA	NA	False	NA	NA	NA	128444675	128447093	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr7_+_128444830_128446918
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119673	chr7	+	135	1	Intergenic	novelGene_412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTCGTCTGTTCGTGAT	NA	False	NA	NA	False	NA	NA	NA	130133038	130133173	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr7_+_130133000_130133200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119706	chr7	+	891	6	NIC	ENSMUSG00000063179.14	novel	1135	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	89.7226838653414	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGATTTGGATAAATTT	NA	False	NA	22	True	ATTAAA	-22	NA	130972884	130989568	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_130973119_130975793_130975993_130985653_130985730_130986228_130986323_130986527_130986594_130989346
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119708	chr7	+	1118	6	NNC	ENSMUSG00000063179.14	novel	1135	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	78.1449934416787	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAAATGTCTGATTTGGAT	NA	False	NA	16	True	ATTAAA	-16	NA	130972884	130989562	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_130973119_130975264_130975560_130975793_130975993_130985653_130985734_130986228_130986323_130989346
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119711	chr7	+	875	5	NIC	ENSMUSG00000063179.14	novel	1135	6	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	87.3480824059693	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTATACTTACAATCT	NA	False	NA	NA	False	AATAAA	-24	NA	130972884	130994500	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_130973119_130975793_130975993_130985653_130985730_130986228_130986323_130994228
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119728	chr7	+	3301	11	FSM	ENSMUSG00000030861.16	ENSMUST00000015829.15	6081	11	45	2735	45	0	multi-exon	FALSE	canonical	3	100	junction_4	19.6022957839127	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATTCTCCCTTTTTATG	NA	False	NA	21	True	AATAAA	-25	NA	131012374	131047938	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_131012517_131026200_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119738	chr7	+	1317	7	ISM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	441	715	-47	13	3prime_fragment	FALSE	canonical	3	1325	junction_5	56.2840020688729	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGTGTTTGTAAACATT	NA	False	NA	29	True	AATAAA	-24	NA	131162391	131172906	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119777	chr7	-	1341	6	NIC	ENSMUSG00000030960.17	novel	1107	6	NA	NA	-2	228	combination_of_known_junctions	FALSE	canonical	3	64	junction_3	113.265352160314	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGAGATAATGTCTCACT	NA	False	NA	-5	True	ATTAAA	-21	NA	132454404	132428957	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_132429612_132433088_132433306_132438828_132438937_132452319_132452439_132453154_132453221_132454227
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119783	chr7	-	862	5	NIC	ENSMUSG00000030960.17	novel	1107	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	164.442049062884	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTGGTTTTTGTGC	NA	False	NA	NA	False	AGTAAA	-18	NA	132454370	132429185	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_132429612_132438828_132438937_132452319_132452439_132453154_132453221_132454227
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119791	chr7	-	746	4	NIC	ENSMUSG00000030960.17	novel	1107	6	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	170.763644322269	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTGGTTTTTGTGC	NA	False	NA	NA	False	AGTAAA	-18	NA	132454362	132429185	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_132429612_132452319_132452439_132453154_132453221_132454227
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119828	chr7	+	500	1	ISM	ENSMUSG00000039990.17	ENSMUST00000051169.13	5424	25	34140	789	4477	3	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTAGTTCCCACTTGCA	NA	False	NA	9	True	AATAAA	-22	NA	133273411	133273911	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_133273400_133273900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119854	chr7	+	1147	6	NNC	ENSMUSG00000030983.5	novel	1244	7	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	646.017770653409	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTTGAAGTGTTCATG	1315	False	NA	20	True	AATAAA	-21	NA	133311069	133322871	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_133311258_133315916_133315992_133316627_133316713_133319327_133319516_133320832_133321008_133322435
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119860	chr7	+	1146	6	NIC	ENSMUSG00000030983.5	novel	1244	7	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	78	junction_3	614.874491258175	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGAAGTGTTCATGTCC	1315	False	NA	23	True	AATAAA	-24	NA	133311069	133322874	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_133311258_133315916_133315992_133316627_133316709_133319327_133319516_133320832_133321008_133322435
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119868	chr7	+	1227	7	NNC	ENSMUSG00000030983.5	novel	1244	7	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	614.560931795122	526	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAGTGTTCATGTCCAG	1317	False	NA	25	True	AATAAA	-26	NA	133311071	133322876	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_133311249_133315916_133315992_133316627_133316709_133318589_133318680_133319327_133319516_133320832_133321008_133322435
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119874	chr7	+	443	1	Genic_Genomic	ENSMUSG00000030983.5	novel	NA	NA	NA	NA	3326	2	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAGTGTTCATGTCCAG	NA	False	NA	25	True	AATAAA	-26	NA	133322433	133322876	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_+_133322400_133322900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119901	chr7	+	688	4	NIC	ENSMUSG00000054612.5	novel	2894	5	NA	NA	-28	-2073	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	91.8634251968045	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCTGCCCTTTCTTGTT	NA	False	NA	38	True	ATTAAA	-29	NA	136496314	136729922	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_136496417_136552996_136553134_136723217_136723358_136729613
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000119976	chr7	+	1139	11	NNC	ENSMUSG00000031068.9	novel	1685	11	NA	NA	2	-407	at_least_one_novel_splicesite	FALSE	canonical	3	234	junction_3	1056.66335225558	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCGTGTAGAATGTCT	NA	False	NA	34	True	AATAAA	-22	NA	137039386	137069916	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_137039501_137046707_137046817_137054425_137054501_137055236_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120030	chr7	-	440	2	ISM	ENSMUSG00000041309.18	ENSMUST00000097974.9	1907	4	1739	0	1732	0	3prime_fragment	FALSE	canonical	3	11	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTCCGCAGGCGCCTT	NA	False	NA	-9	True	AATAAA	-20	NA	139160974	139159291	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_139159538_139160780
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120032	chr7	+	221	1	ISM	ENSMUSG00000025477.15	ENSMUST00000106098.8	2826	16	190323	0	55574	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGCTGCTTATTCTCC	NA	False	NA	19	True	AATAAA	-20	NA	139159347	139159568	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_139159300_139159600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120043	chr7	+	1331	1	Genic_Genomic	ENSMUSG00000047751.10	novel	NA	NA	NA	NA	-7	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTGAATGAATTCGGAC	NA	False	NA	NA	False	AATAAA	-20	NA	139523694	139525025	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_+_139523700_139525000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120054	chr7	+	1101	6	FSM	ENSMUSG00000025470.12	ENSMUST00000168194.3	1076	6	-21	-4	0	4	multi-exon	FALSE	canonical	3	304	junction_1	28.032837887021	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTCTTCTTCATGTGTT	NA	False	NA	23	True	AATAAA	-20	NA	139616303	139620519	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617554_139619238_139619359_139620155
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120062	chr7	+	1086	6	NNC	ENSMUSG00000025470.12	novel	1076	6	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	136.213949359087	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTCTTCTTCATGTGTT	NA	False	NA	23	True	AATAAA	-20	NA	139616322	139620519	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617554_139619238_139619363_139620155
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120081	chr7	+	821	1	Genic_Genomic	ENSMUSG00000025470.12	novel	NA	NA	NA	NA	2916	4	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTCTTCTTCATGTGTT	NA	False	NA	23	True	AATAAA	-20	NA	139619698	139620519	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_+_139619700_139620500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120100	chr7	-	707	6	NIC	ENSMUSG00000025466.20	novel	536	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	207.079115315862	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTTGTGGTGAGTTCC	1591	False	NA	0	True	NA	NA	NA	139682234	139679382	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_139679536_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139681993
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120103	chr7	-	648	6	NIC	ENSMUSG00000025466.20	novel	536	6	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	189.170399375801	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTTGTGGTGAGTTCC	1936	False	NA	0	True	NA	NA	NA	139681889	139679382	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_139679536_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139681707
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120111	chr7	-	822	6	NIC	ENSMUSG00000025466.20	novel	685	6	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_5	162.288138814887	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTTGTGGTGAGTTCC	1560	False	NA	0	True	NA	NA	NA	139682265	139679382	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_139679620_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139681993
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120130	chr7	-	904	5	NIC	ENSMUSG00000025466.20	novel	685	6	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	140	junction_4	143.095029613191	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTTGTGGTGAGTTCC	1936	False	NA	0	True	NA	NA	NA	139681889	139679382	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139681707
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120158	chr7	+	1770	7	FSM	ENSMUSG00000025464.16	ENSMUST00000026537.13	4655	7	-3	2888	-3	2	multi-exon	FALSE	canonical	3	213	junction_2	25.7552583627758	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTAGAGTACTTCTCA	NA	False	NA	24	True	CATAAA	-16	NA	139705566	139714249	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_139705796_139706238_139706729_139707420_139707621_139708930_139709184_139711559_139711673_139712293_139712452_139713922
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120175	chr7	-	1493	13	FSM	ENSMUSG00000025480.6	ENSMUST00000026553.6	1460	13	-33	0	-33	0	multi-exon	FALSE	canonical	3	141	junction_11	16.7779617355625	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTATATTGTGTGTG	NA	False	NA	0	True	AATAAA	-18	NA	140367798	140357141	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140359795_140359844_140360369_140360445_140360787_140360848_140361939_140362003_140367648
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120190	chr7	+	895	4	FSM	ENSMUSG00000025481.13	ENSMUST00000106050.8	719	4	-92	-84	-92	5	multi-exon	FALSE	canonical	3	242	junction_1	5.43650214343336	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAACCTATCATTGGGAT	NA	False	NA	32	True	AATAAA	-22	NA	140414838	140417884	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_140415172_140415524_140415665_140416659_140416796_140417598
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120195	chr7	+	696	4	NNC	ENSMUSG00000025481.13	novel	719	4	NA	NA	111	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	116.259288756736	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAACCTATCATTGGGAT	NA	False	NA	32	True	AATAAA	-22	NA	140415041	140417884	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_140415172_140415524_140415665_140416659_140416800_140417598
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120213	chr7	-	1126	1	FSM	ENSMUSG00000025484.10	ENSMUST00000210157.2	1882	1	1744	-988	1720	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCGTGCCCGTCTCTATG	NA	False	NA	-17	True	CATAAA	-24	NA	140434439	140433313	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_140433300_140434400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120232	chr7	+	436	1	ISM	ENSMUSG00000025485.14	ENSMUST00000026558.7	3406	10	5756	582	1540	5	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAACATTCATGATTTCCT	NA	False	NA	14	True	ATTAAA	-21	NA	140442625	140443061	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_140442600_140443100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120236	chr7	-	420	2	Genic_Genomic	ENSMUSG00000025486.18	novel	3206	1	NA	NA	494	932	multi-exon	TRUE	canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATTACCACCCTCATACA	NA	False	NA	NA	False	NA	NA	NA	140456465	140442646	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_-_140443048_140456446
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120242	chr7	-	1434	7	NIC	ENSMUSG00000025486.18	novel	1416	7	NA	NA	-8	14	combination_of_known_junctions	FALSE	canonical	3	70	junction_6	62.3475919520732	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGATAGTGAGTGTTGACA	NA	False	NA	4	True	AATAAA	-32	NA	140461790	140443564	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140458051_140461675
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120337	chr7	-	569	2	Fusion	ENSMUSG00000060591.10_ENSMUSG00000025492.7	novel	655	2	NA	NA	128	-14	multi-exon	FALSE	canonical	3	74	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGCAACTCTGGCTGTG	NA	False	NA	-26	True	AATAAA	-8	NA	140590555	140534763	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr7_-_140535087_140590309
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120345	chr7	+	747	2	FSM	ENSMUSG00000025491.15	ENSMUST00000026564.9	736	2	-5	-6	-5	6	multi-exon	FALSE	canonical	3	1139	junction_1	0	4556	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTGTTGAGTTCGTCC	NA	False	NA	30	True	AATAAA	-34	NA	140547947	140549744	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_140548352_140549401
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120367	chr7	-	650	2	NNC	ENSMUSG00000025492.7	novel	678	2	NA	NA	26	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGACTGCTTTTATTC	NA	False	NA	-1	True	AATAAA	-20	NA	140590657	140589501	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_-_140589798_140590303
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120392	chr7	+	1364	7	ISM	ENSMUSG00000055629.6	ENSMUST00000209546.2	3076	16	4101	0	-1680	0	3prime_fragment	FALSE	canonical	3	132	junction_1	32.7503180646133	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTCTGTGAGTGTTC	NA	False	NA	24	True	AATGAA	-25	NA	140648507	140652313	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120399	chr7	+	1305	6	ISM	ENSMUSG00000055629.6	ENSMUST00000209546.2	3076	16	5809	0	28	0	3prime_fragment	FALSE	canonical	3	186	junction_1	17.8706463229509	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTCTGTGAGTGTTC	NA	False	NA	24	True	AATGAA	-25	NA	140650215	140652313	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120402	chr7	+	397	1	ISM	ENSMUSG00000055629.6	ENSMUST00000048002.7	3556	20	10900	0	1402	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTCTGTGAGTGTTC	NA	False	NA	24	True	AATGAA	-25	NA	140651916	140652313	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_140651900_140652300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120405	chr7	+	1461	7	FSM	ENSMUSG00000054065.13	ENSMUST00000160403.8	1425	7	-27	-9	-27	6	multi-exon	FALSE	canonical	3	51	junction_3	7.83156008298049	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTGTGTTTCCGTGAC	587	False	NA	25	True	ATTAAA	-23	NA	140668031	140670429	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_140668315_140668393_140668565_140668651_140668838_140669157_140669312_140669481_140669675_140669768_140669857_140670043
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120438	chr7	+	707	4	FSM	ENSMUSG00000025495.16	ENSMUST00000173721.8	655	4	-23	-29	20	0	multi-exon	FALSE	canonical	1	1	junction_3	147.981980885061	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGTGTATATTTATTT	6845	False	NA	NA	False	AATAAA	-15	NA	140711233	140723584	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_140711431_140715221_140715324_140723005_140723089_140723259
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120452	chr7	+	777	1	ISM	ENSMUSG00000025495.16	ENSMUST00000026568.10	3624	12	24140	1404	803	600	mono-exon	FALSE	NA	NA	NA	NA	NA	736	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGAGTGTGTGTGTCTGTC	NA	False	NA	59	True	NA	NA	NA	140735338	140736115	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_140735300_140736100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120459	chr7	-	1660	10	FSM	ENSMUSG00000038650.16	ENSMUST00000210314.2	1658	10	3	-5	3	5	multi-exon	FALSE	canonical	3	224	junction_9	176.376561249007	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTTGTCGTTCTTTGTGG	NA	False	NA	NA	False	ATTAAA	-21	NA	140748599	140740233	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140748486
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120483	chr7	-	855	4	ISM	ENSMUSG00000025499.19	ENSMUST00000124314.3	1073	5	428	-1	428	0	3prime_fragment	FALSE	canonical	3	72	junction_2	236.66760563194	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGGCTGGAAGTA	756	False	NA	-2	True	AGTAAA	-18	NA	140772425	140770838	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_140771381_140771867_140771950_140772043_140772204_140772354
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120495	chr7	+	799	5	NIC	ENSMUSG00000038618.13	novel	1525	6	NA	NA	-2	0	combination_of_known_splicesites	TRUE	canonical	3	36	junction_2	126.772187407175	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140795785	140798571	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_140795854_140796633_140796765_140797798_140797931_140798002_140798082_140798182
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120501	chr7	+	229	1	Genic_Genomic	ENSMUSG00000038618.13	novel	NA	NA	NA	NA	793	1	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGTGTCCTGAGGTTG	NA	False	NA	21	True	AATAAA	-18	NA	140798343	140798572	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_+_140798300_140798600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120515	chr7	+	213	1	Intergenic	novelGene_413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGGGCTAGAGAGAT	7420	False	NA	NA	False	TTTAAA	-10	NA	140928360	140928573	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr7_+_140928400_140928600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120528	chr7	+	1204	8	NNC	ENSMUSG00000025503.6	novel	1229	8	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	1285.53466999342	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTCATTTCACCGTC	3804	False	NA	18	True	ATTAAA	-17	NA	140972075	140982881	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_140972232_140975961_140976086_140978407_140978516_140980200_140980333_140981554_140981670_140981784_140981983_140982096_140982243_140982656
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120564	chr7	+	226	1	NIC	ENSMUSG00000025503.6	novel	1229	8	NA	NA	2589	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTCATTTCACCGTC	6257	False	NA	18	True	ATTAAA	-17	NA	140982655	140982881	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr7_+_140982700_140982900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120569	chr7	+	837	1	FSM	ENSMUSG00000091083.5	ENSMUST00000182274.2	558	1	-123	-156	-123	156	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCCTCTTTAGGGATAG	NA	False	NA	NA	False	AATAAA	-41	NA	140986426	140987263	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_140986400_140987300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120590	chr7	+	750	5	NNC	ENSMUSG00000025508.14	novel	964	5	NA	NA	-12	12	at_least_one_novel_splicesite	FALSE	canonical	3	625	junction_4	5897.4512503284	5212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGTCAACATGCGACA	2105	False	NA	39	True	AATAAA	-32	NA	141027270	141031275	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_141027621_141027820_141027945_141028638_141028688_141030916_141031016_141031147
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120613	chr7	+	454	5	NNC	ENSMUSG00000025508.14	novel	964	5	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5666.81855188606	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTTTAAACATTTTGT	2384	False	NA	27	True	AATAAA	-20	NA	141027549	141031263	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_141027621_141027820_141027945_141028646_141028688_141030916_141031016_141031144
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120626	chr7	+	434	5	NNC	ENSMUSG00000025508.14	novel	964	5	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6159.35911337373	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTTTAAACATTTTGT	2394	False	NA	27	True	AATAAA	-20	NA	141027559	141031263	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_141027621_141027820_141027945_141028638_141028688_141030916_141030998_141031144
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120673	chr7	+	432	5	NNC	ENSMUSG00000025508.14	novel	964	5	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5652.57076470521	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTTTAAACATTTTGT	2399	False	NA	27	True	AATAAA	-20	NA	141027564	141031263	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_141027621_141027820_141027945_141028638_141028692_141030935_141031016_141031144
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120683	chr7	+	433	5	FSM	ENSMUSG00000025508.14	ENSMUST00000106004.8	421	5	-12	0	-12	0	multi-exon	FALSE	canonical	3	34	junction_1	6154.22628666675	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTTTAAACATTTTGT	2447	False	NA	27	True	AATAAA	-20	NA	141027612	141031263	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_141027655_141027820_141027945_141028638_141028688_141030916_141031016_141031144
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120686	chr7	+	588	4	NNC	ENSMUSG00000025508.14	novel	449	4	NA	NA	-4	0	intron_retention	FALSE	canonical	3	625	junction_3	6788.26639626545	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTTTAAACATTTTGT	2455	False	NA	27	True	AATAAA	-20	NA	141027620	141031263	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_141027945_141028638_141028688_141030916_141031016_141031147
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120697	chr7	+	210	1	ISM	ENSMUSG00000048200.13	ENSMUST00000053670.12	1698	10	5310	0	730	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTGGCTCTTGTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	141046316	141046526	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_141046300_141046500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120708	chr7	+	1667	7	FSM	ENSMUSG00000025510.15	ENSMUST00000058746.7	1619	7	-39	-9	-39	8	multi-exon	FALSE	canonical	3	37	junction_1	95.130465969402	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTTGCTGACAGGACCT	671	False	NA	16	True	NA	NA	NA	141048695	141051394	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_141048810_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120712	chr7	+	933	1	Genic_Genomic	ENSMUSG00000025510.15	novel	NA	NA	NA	NA	166	8	mono-exon	FALSE	NA	NA	NA	NA	NA	409	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTTGCTGACAGGACCT	2437	False	NA	16	True	NA	NA	NA	141050461	141051394	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_+_141050500_141051400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120735	chr7	+	1445	8	FSM	ENSMUSG00000025511.16	ENSMUST00000026585.14	1466	8	21	0	21	0	multi-exon	FALSE	canonical	3	56	junction_1	68.6787850082111	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGAAGTTCTTTCATTT	3512	False	NA	45	True	NA	NA	NA	141055173	141073340	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_141055411_141062399_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120756	chr7	+	941	1	ISM	ENSMUSG00000002957.12	ENSMUST00000003038.12	4646	22	69898	0	69541	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTGTGGTTTTTGTGG	NA	False	NA	28	True	AATAAA	-22	NA	141211983	141212924	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_141212000_141212900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120765	chr7	-	1524	5	FSM	ENSMUSG00000025147.8	ENSMUST00000084418.4	1490	5	-1	-33	-1	18	multi-exon	FALSE	canonical	3	149	junction_3	10.8857705285386	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGAGTCTTCCTTGTGGT	NA	False	NA	-1	True	NA	NA	NA	141614803	141562253	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_141563316_141563989_141564115_141569815_141569910_141570081_141570243_141614721
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120796	chr7	+	526	5	NNC	ENSMUSG00000037772.14	novel	692	5	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_4	598.550123214422	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGACACTTTGCCTT	NA	False	NA	2	True	AATAAA	-20	NA	142086874	142094484	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr7_+_142086932_142088741_142088865_142089806_142089890_142091003_142091078_142094295
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120814	chr7	-	1642	3	FSM	ENSMUSG00000009248.7	ENSMUST00000009392.6	1605	3	-33	-4	-33	4	multi-exon	FALSE	canonical	3	20	junction_1	4	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCAGTGCCTTGTACCTT	NA	False	NA	-5	True	TATAAA	-19	NA	142523034	142520561	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_142521077_142521636_142522437_142522707
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120847	chr7	+	1416	2	ISM	ENSMUSG00000045752.14	ENSMUST00000105920.8	895	4	69	-6	13	0	intron_retention	FALSE	canonical	3	160	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGGCTTTTTCCGGGC	NA	False	NA	22	True	AATAAA	-21	NA	142623173	142624830	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_+_142623251_142623491
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120874	chr7	-	2316	16	FSM	ENSMUSG00000059119.10	ENSMUST00000072727.7	2285	16	-31	0	-17	0	multi-exon	FALSE	canonical	3	502	junction_2	192.287354411741	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGGTTTTTTTGTTGTTT	NA	False	NA	-1	True	ATTAAA	-20	NA	143102860	143067315	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120936	chr7	-	528	1	ISM	ENSMUSG00000037519.18	ENSMUST00000168134.10	5181	31	76444	0	1833	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAGAGTGCTGTGAACAG	NA	False	NA	-2	True	AATAAA	-24	NA	144031022	144030494	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr7_-_144030500_144031000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120949	chr7	+	2141	1	Genic_Genomic	ENSMUSG00000050917.6	novel	NA	NA	NA	NA	1722	5	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTGCTTTGTCTTT	9724	False	NA	33	True	ATTAAA	-23	NA	144416844	144418985	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr7_+_144416800_144419000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000120958	chr7	+	366	1	FSM	ENSMUSG00000031072.15	ENSMUST00000207094.2	4022	1	2550	1106	2550	3	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCTGGGATCATTTCT	NA	False	NA	11	True	AATAAA	-21	NA	144474508	144474874	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr7_+_144474500_144474900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121025	chr8	+	204	1	Intergenic	novelGene_414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTACAATACCAATATCACAA	1179	False	NA	NA	False	ATTAAA	-14	NA	3667142	3667346	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_+_3667100_3667300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121082	chr8	+	623	3	NNC	ENSMUSG00000087687.4	novel	363	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTAGTGCCAAGTGTT	5635	False	NA	10	True	NA	NA	NA	3671598	3673372	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_3671974_3672341_3672441_3673223
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121088	chr8	+	152	1	NIC	ENSMUSG00000087687.4	novel	656	5	NA	NA	1619	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTAGTGCCAAGTGTT	7257	False	NA	10	True	NA	NA	NA	3673220	3673372	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_+_3673200_3673400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121093	chr8	+	582	1	ISM	ENSMUSG00000087687.4	ENSMUST00000156380.4	1193	4	2103	0	2052	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTACTCTTCATTGATTT	7690	False	NA	NA	False	AAAACA	-14	NA	3673653	3674235	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_3673700_3674200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121095	chr8	+	1892	19	FSM	ENSMUSG00000004626.15	ENSMUST00000160708.8	2908	19	170	846	-27	3	multi-exon	FALSE	canonical	3	307	junction_10	31.5352536413174	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTCACCTCATTTTCTTC	4557	False	NA	19	True	AATAAA	-25	NA	3681124	3692798	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121105	chr8	+	181	1	Genic_Genomic	ENSMUSG00000012705.17	novel	NA	NA	NA	NA	4198	38	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCATCCTGGTCTACCTAG	NA	False	NA	NA	False	NA	NA	NA	3709967	3710148	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_+_3710000_3710100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121110	chr8	-	214	1	Genic_Genomic	ENSMUSG00000089665.3	novel	NA	NA	NA	NA	964	3	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATGTCTTTCTATTAC	NA	False	NA	-1	True	AATACA	-18	NA	3721398	3721184	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_-_3721200_3721400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121125	chr8	+	618	1	FSM	ENSMUSG00000040236.5	ENSMUST00000207787.2	4411	1	2502	1291	2502	-1291	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTTGTGTCTTGTGT	NA	False	NA	24	True	GATAAA	-24	NA	3729011	3729629	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_3729000_3729600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121132	chr8	-	473	1	ISM	ENSMUSG00000040197.5	ENSMUST00000033888.5	1802	6	5870	2	5870	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGAGAGATGGACTGCT	NA	False	NA	NA	False	AATAAA	-19	NA	3898439	3897966	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_3898000_3898400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121133	chr8	-	1768	6	NNC	ENSMUSG00000040197.5	novel	1802	6	NA	NA	-8096	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	2.72763633939717	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGAGAGATGGACTGCT	5812	False	NA	NA	False	AATAAA	-19	NA	3912405	3897966	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_3899238_3901179_3901290_3902741_3902894_3903179_3903273_3903559_3903650_3912353
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121161	chr8	-	1411	1	ISM	ENSMUSG00000040028.11	ENSMUST00000098950.6	5743	6	35661	2960	22867	1	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTTTTTTGTTT	NA	False	NA	0	True	ATTAAA	-22	NA	4339752	4338341	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_4338300_4339800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121255	chr8	+	1867	2	FSM	ENSMUSG00000045969.9	ENSMUST00000210740.2	1866	2	0	-1	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTTTATTTCCTTATG	NA	False	NA	16	True	NA	NA	NA	11606062	11613251	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_11606096_11611417
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121306	chr8	+	1479	2	Antisense	novelGene_ENSMUSG00000110313.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATTTTTTAAAAAAAGATT	5184	False	NA	NA	False	NA	NA	NA	11733396	11765282	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr8_+_11734336_11764742
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121313	chr8	+	742	3	NNC	ENSMUSG00000109772.2	novel	429	2	NA	NA	-4175	178	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	1.5	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTCTTGATTTCTTTC	6854	False	NA	NA	False	NA	NA	NA	11919983	11944291	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_11920098_11924137_11924331_11943856
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121322	chr8	+	621	2	Intergenic	novelGene_415	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTGCAGCCTTGGTAT	NA	False	NA	NA	False	NA	NA	NA	12586933	12589204	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_+_12587064_12588713
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121337	chr8	-	809	1	ISM	ENSMUSG00000038542.15	ENSMUST00000168164.8	2678	11	27462	0	8686	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCATTTGTGTTTTGTCC	NA	False	NA	-6	True	AATAAA	-17	NA	13127997	13127188	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_13127200_13128000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121342	chr8	+	793	1	ISM	ENSMUSG00000031446.15	ENSMUST00000016680.14	3728	20	41527	0	2923	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTTACTAATACATTGG	NA	False	NA	26	True	AATAAA	-23	NA	13197147	13197940	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_13197100_13197900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121375	chr8	+	976	1	ISM	ENSMUSG00000038482.12	ENSMUST00000209885.2	2511	12	38722	0	8008	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	1986	False	NA	94	True	AATAAA	-24	NA	13427472	13428448	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_13427500_13428400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121387	chr8	+	871	2	FSM	ENSMUSG00000038398.9	ENSMUST00000211643.2	1131	2	-19	279	-9	-279	multi-exon	FALSE	canonical	3	312	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTATCCTTTGAAAAACC	NA	False	NA	NA	False	AATAAA	-17	NA	13835625	13836758	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_13835885_13836146
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121388	chr8	+	1581	9	FSM	ENSMUSG00000038398.9	ENSMUST00000043767.9	2057	9	11	465	-9	-465	multi-exon	FALSE	canonical	3	271	junction_6	38.5873603010105	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTTTGTTTTTTT	NA	False	NA	17	True	AATAAA	-30	NA	13835625	13848728	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_13835885_13836146_13836254_13837364_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121448	chr8	-	2439	3	NNC	ENSMUSG00000050052.13	novel	2463	3	NA	NA	12	-2	intron_retention	TRUE	canonical	3	30	junction_2	133	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTTTAGTGTGTATATT	4826	False	NA	-6	True	ATTAAA	-16	NA	14024731	14002009	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_14004136_14005719_14005818_14024516
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121452	chr8	-	1593	6	FSM	ENSMUSG00000051978.10	ENSMUST00000110813.5	1557	6	-30	-6	-30	6	multi-exon	FALSE	canonical	3	204	junction_5	39.1591624016653	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTGATAAGATTATAAAT	NA	False	NA	0	True	AATAAA	-24	NA	14140331	14077554	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_14078154_14080592_14080785_14083335_14083765_14114204_14114340_14128769_14128917_14140240
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121462	chr8	+	1041	1	FSM	ENSMUSG00000074461.3	ENSMUST00000098916.3	2130	1	0	1089	0	-1089	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGCTGCTTTCTTCT	4307	False	NA	NA	False	NA	NA	NA	14140460	14141501	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_14140500_14141500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121470	chr8	+	1038	1	FSM	ENSMUSG00000074461.3	ENSMUST00000098916.3	2130	1	1099	-7	1099	7	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	5406	False	NA	NA	False	NA	NA	NA	14141559	14142597	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_14141600_14142600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121482	chr8	+	115	1	ISM	ENSMUSG00000026317.8	ENSMUST00000027554.8	6857	3	13495	0	12247	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTGCCATATATATGT	NA	False	NA	6	True	NA	NA	NA	14951605	14951720	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_14951600_14951700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121492	chr8	-	355	1	Intergenic	novelGene_416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGCCCTTTAATAACCT	6071	False	NA	NA	False	ATTAAA	-17	NA	18896201	18895846	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_-_18895800_18896200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121511	chr8	+	732	1	FSM	ENSMUSG00000081094.5	ENSMUST00000122422.3	591	1	-42	-99	-42	99	mono-exon	FALSE	NA	NA	NA	NA	NA	17706	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACTCAGAGCTAAACAAAG	7075	False	NA	NA	False	AATAAA	-34	NA	19542909	19543641	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_19542900_19543600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121515	chr8	+	595	2	Genic_Genomic	ENSMUSG00000081094.5	novel	591	1	NA	NA	-30	97	multi-exon	FALSE	canonical	3	362	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGACTCAGAGCTAAACAA	7087	False	NA	NA	False	AATAAA	-32	NA	19542921	19543639	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_+_19543064_19543186
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121519	chr8	-	888	2	Antisense	novelGene_ENSMUSG00002075262.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATTTTTTTAATGGGGT	NA	False	NA	NA	False	NA	NA	NA	19548316	19542921	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr8_-_19543671_19548177
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121529	chr8	+	207	1	Intergenic	novelGene_417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATCACTGAAGAGTGACA	NA	False	NA	NA	False	AAAACA	-16	NA	19755241	19755448	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_+_19755200_19755400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121535	chr8	+	625	1	Intergenic	novelGene_418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCCTGCTCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	19756703	19757328	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_+_19756700_19757300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121599	chr8	+	1230	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	109	335	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	527.763915022617	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCATTCAACGTTAGGGC	NA	False	NA	NA	False	AATAAA	-15	NA	20016574	20046223	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20039783_20039904_20045732
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121616	chr8	+	1303	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-97	-3641	multi-exon	FALSE	canonical	3	434	junction_2	317.198183317622	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTCTCCTGTCTCAGTGTT	NA	False	NA	NA	False	CATAAA	-18	NA	20697887	20723625	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717497_20721120_20721241_20723149
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121663	chr8	+	1370	14	FSM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	-3	2207	-3	4	multi-exon	TRUE	canonical	3	316	junction_5	36.370219952707	347	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTCTCAGAAACTTACT	NA	False	NA	26	True	TATAAA	-21	NA	22682821	22708652	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_22682983_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121693	chr8	+	1275	7	NNC	ENSMUSG00000031533.5	novel	1515	7	NA	NA	23	-185	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	278.788101531532	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCTGTGTTGATCATTG	NA	False	NA	15	True	ATTAAA	-24	NA	22901436	22919496	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_22901606_22904731_22905020_22909742_22909902_22911325_22911467_22914362_22914437_22917763_22917908_22919196
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121701	chr8	+	188	1	Intergenic	novelGene_419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTAAAAAGTAAGAGA	NA	False	NA	NA	False	AATAAA	-6	NA	22913648	22913836	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_+_22913600_22913800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121710	chr8	-	1196	4	FSM	ENSMUSG00000031534.16	ENSMUST00000033935.16	1402	4	207	-1	180	0	multi-exon	FALSE	canonical	3	179	junction_1	20.3960780543711	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTTGCATCATTTTGT	NA	False	NA	0	True	NA	NA	NA	22966691	22952629	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_22953392_22961464_22961590_22963457_22963597_22966521
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121725	chr8	-	1433	9	FSM	ENSMUSG00000008892.13	ENSMUST00000009036.11	1354	9	-67	-12	-12	1	multi-exon	FALSE	canonical	3	2053	junction_8	117.712573669936	2991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTAGTAGTGGTTGGTT	NA	False	NA	1	True	AATAAA	-34	NA	23083841	23067089	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121735	chr8	-	475	1	ISM	ENSMUSG00000008892.13	ENSMUST00000179233.2	1423	9	16253	11	8561	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCATCTGACTTCTTAG	NA	False	NA	-11	True	AATAAA	-22	NA	23067576	23067101	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_23067100_23067600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121736	chr8	-	1356	9	NNC	ENSMUSG00000008892.13	novel	1354	9	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	714.928624059773	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCATCTGACTTCTTAG	NA	False	NA	-11	True	AATAAA	-22	NA	23083779	23067101	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_23067616_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121767	chr8	-	1245	14	FSM	ENSMUSG00000031536.7	ENSMUST00000033938.7	1201	14	-31	-13	-14	13	multi-exon	FALSE	canonical	3	173	junction_8	16.1157058899497	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAATTTAGTTATG	NA	False	NA	NA	False	AATAAA	-33	NA	23143465	23118128	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_23118386_23120358_23120499_23121470_23121536_23127083_23127171_23129949_23130021_23130374_23130448_23130528_23130584_23132320_23132373_23135060_23135111_23137428_23137488_23138197_23138273_23140504_23140572_23143075_23143134_23143329
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121772	chr8	-	1151	14	NNC	ENSMUSG00000031536.7	novel	1201	14	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	51.8827763829876	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTCTTAACAAATGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	23143441	23118143	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_23118386_23120358_23120499_23121470_23121536_23127083_23127116_23129949_23130021_23130374_23130448_23130528_23130584_23132320_23132373_23135060_23135111_23137428_23137488_23138197_23138273_23140504_23140572_23143075_23143134_23143329
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121793	chr8	-	3083	13	FSM	ENSMUSG00000031545.7	ENSMUST00000167004.3	5518	13	-33	2468	-33	-2468	multi-exon	FALSE	canonical	3	189	junction_11	21.3085793884894	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGGACTTTGCCTTCAT	NA	False	NA	-18	True	AATAAA	-18	NA	23698395	23663748	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_23664677_23665355_23665436_23665523_23665653_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670743_23670875_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121796	chr8	-	929	1	NIC	ENSMUSG00000031545.7	novel	5518	13	NA	NA	5566	-2468	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGGACTTTGCCTTCAT	NA	False	NA	-18	True	AATAAA	-18	NA	23664677	23663748	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_-_23663700_23664700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121831	chr8	-	1834	6	FSM	ENSMUSG00000015341.18	ENSMUST00000051094.9	1792	6	-8	-34	-8	34	multi-exon	TRUE	canonical	3	715	junction_5	234.329170185873	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAATGCTATGGCATCTTA	NA	False	NA	15	True	AATAAA	-35	NA	23747098	23731327	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689_23746823_23747035
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121846	chr8	-	497	4	ISM	ENSMUSG00000015341.18	ENSMUST00000051094.9	1792	6	-1	4464	-1	1	5prime_fragment	FALSE	canonical	3	715	junction_3	284.598352458728	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGATGGTATTATTTGGC	NA	False	NA	NA	False	AAAAAG	-1	NA	23747091	23735825	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_23735981_23740264_23740418_23746689_23746823_23747035
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121860	chr8	+	1286	4	FSM	ENSMUSG00000031556.7	ENSMUST00000033961.7	1281	4	-4	-1	-4	1	multi-exon	FALSE	canonical	3	225	junction_1	26.3185612575358	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGTGTGAGTATTTCA	NA	False	NA	15	True	AATAAA	-15	NA	25507222	25513277	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_25507609_25508081_25508170_25510454_25510571_25512581
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121868	chr8	+	573	1	ISM	ENSMUSG00000031556.7	ENSMUST00000033961.7	1281	4	5477	0	5381	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGAGTATTTC	NA	False	NA	14	True	AATAAA	-14	NA	25512703	25513276	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_25512700_25513300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121886	chr8	+	382	2	Genic_Genomic	ENSMUSG00000074412.5	novel	432	1	NA	NA	-33	75	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTACATTGGGAATTCATC	NA	False	NA	NA	False	NA	NA	NA	25944255	25944795	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_+_25944297_25944454
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121940	chr8	-	639	1	ISM	ENSMUSG00000031575.19	ENSMUST00000068892.15	3307	16	23279	874	6067	0	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTTCACTGGAAGTGA	NA	False	NA	-6	True	AATAAA	-25	NA	26307536	26306897	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_26306900_26307500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121941	chr8	-	2426	16	FSM	ENSMUSG00000031575.19	ENSMUST00000068892.15	3307	16	7	874	7	0	multi-exon	FALSE	canonical	3	230	junction_15	813.355748325008	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTTCACTGGAAGTGA	NA	False	NA	-6	True	AATAAA	-25	NA	26330808	26306897	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26330609
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000121983	chr8	-	1115	1	ISM	ENSMUSG00000037251.6	ENSMUST00000061850.5	3613	5	11594	821	11594	-821	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGTGCTGGCATCC	NA	False	NA	NA	False	AATAAA	-15	NA	26472567	26471452	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_26471500_26472600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122017	chr8	+	675	1	ISM	ENSMUSG00000037214.13	ENSMUST00000036807.13	2295	3	5336	0	4684	0	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGCCCTGCTTTTTT	NA	False	NA	7	True	ATTAAA	-18	NA	26653504	26654179	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_26653500_26654200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122031	chr8	+	2528	9	NNC	ENSMUSG00000031485.16	novel	3603	8	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	86.0112637972493	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATGCGTGTGGGTGTTT	NA	False	NA	25	True	AATAAA	-17	NA	27532630	27546160	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313_27544055_27545081
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122046	chr8	-	315	1	ISM	ENSMUSG00000031487.6	ENSMUST00000033877.6	1899	4	4540	462	1371	379	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCTTGGCTTTTCTTTT	NA	False	NA	NA	False	AAGAAA	-1	NA	27614168	27613853	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_27613900_27614200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122069	chr8	-	1475	4	NIC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	-876	0	intron_retention	FALSE	canonical	3	112	junction_1	7.25718035235908	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCTATGTTCTCCTT	NA	False	NA	-7	True	AATAAA	-17	NA	27689621	27687486	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_-_27687710_27687955_27688099_27688420_27689446_27689537
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122092	chr8	-	1161	3	ISM	ENSMUSG00000031489.16	ENSMUST00000081438.10	2795	4	1992	0	898	0	3prime_fragment	FALSE	canonical	1	3	junction_1	62.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27717624	27715803	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_27716557_27716753_27716822_27717284
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122146	chr8	-	110	1	FSM	ENSMUSG00000088252.3	ENSMUST00000157627.3	104	1	-2	-4	-2	4	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGAGGATCCTCCACTT	NA	False	NA	-8	True	NA	NA	NA	31639997	31639887	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_31639900_31640000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122155	chr8	-	1926	10	FSM	ENSMUSG00000031578.6	ENSMUST00000033983.6	1902	10	-21	-3	-21	3	multi-exon	FALSE	canonical	3	742	junction_2	38.8285245790727	733	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTTGAGAATTCTGTGG	NA	False	NA	1	True	TATAAA	-23	NA	31658813	31649487	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122178	chr8	+	359	1	Intergenic	novelGene_420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCACTTACGTTCTAGG	NA	False	NA	NA	False	NA	NA	NA	34035588	34035947	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_+_34035600_34035900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122215	chr8	+	862	3	FSM	ENSMUSG00000031585.14	ENSMUST00000186200.2	471	3	0	-391	0	-4	multi-exon	FALSE	canonical	3	53	junction_1	654	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATGCTTTGTTTTAAA	NA	False	NA	14	True	AATAAA	-18	NA	34255029	34267197	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_34255059_34265971_34266088_34266480
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122218	chr8	+	477	1	Genic_Genomic	ENSMUSG00000031585.14	novel	NA	NA	NA	NA	11697	2	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTTGTTTTAAAAAGCTA	NA	False	NA	20	True	AATAAA	-24	NA	34266726	34267203	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_+_34266700_34267200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122224	chr8	-	588	5	NNC	ENSMUSG00000031586.18	novel	865	6	NA	NA	14559	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	401.900796217176	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTTAAGAAATGTGTTA	NA	False	NA	NA	False	AATAAA	-26	NA	34319140	34274091	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_34274215_34279419_34279524_34285109_34285179_34296744_34296879_34318982
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122254	chr8	-	739	1	FSM	ENSMUSG00000063412.5	ENSMUST00000080152.5	736	1	-1	-2	-1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	357	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTATTTTCAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	34578892	34578153	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_34578200_34578900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122268	chr8	+	1888	6	FSM	ENSMUSG00000031532.8	ENSMUST00000239436.2	1897	6	13	-4	0	4	multi-exon	FALSE	canonical	3	207	junction_1	37.2633868562695	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTCGTGTGTGGTTTCC	NA	False	NA	37	True	AATAAA	-44	NA	34621729	34638003	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_34621991_34628348_34628528_34632294_34632695_34634872_34635012_34635610_34635766_34637249
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122312	chr8	-	1136	2	Intergenic	novelGene_421	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	37012870	37008642	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_-_37009658_37012749
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122318	chr8	-	700	3	FSM	ENSMUSG00000031523.17	ENSMUST00000145245.2	616	3	-69	-15	0	15	multi-exon	FALSE	canonical	3	26	junction_1	11.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGATAAATTTGCTTTA	NA	False	NA	NA	False	NA	NA	NA	37081097	37060369	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_37060613_37066522_37066595_37080712
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122336	chr8	+	163	1	Genic_Genomic	ENSMUSG00000039470.16	novel	NA	NA	NA	NA	-14887	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCGTCTCCATCCAGTTA	NA	False	NA	3	True	AATAAA	-27	NA	40938604	40938767	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_+_40938600_40938800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122339	chr8	-	939	1	ISM	ENSMUSG00000031601.17	ENSMUST00000034012.10	2615	7	18275	1	7593	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGTGACTGATGGCT	NA	False	NA	-2	True	AATAAA	-22	NA	40946520	40945581	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_40945600_40946500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122354	chr8	-	487	1	ISM	ENSMUSG00000039431.17	ENSMUST00000048890.17	2799	15	83210	0	38935	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATCATTTTATTTTTCC	2153	False	NA	44	True	AATAAA	-29	NA	41004622	41004135	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_41004100_41004600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122372	chr8	-	164	1	ISM	ENSMUSG00000031594.10	ENSMUST00000034003.5	1120	8	23559	0	23556	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGGCCATGGTAATTGT	NA	False	NA	NA	False	AATAAA	-33	NA	41644634	41644470	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_41644500_41644600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122374	chr8	-	1002	6	NNC	ENSMUSG00000031594.10	novel	1120	8	NA	NA	5748	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	3.55527776692624	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGGCCATGGTAATTGT	NA	False	NA	NA	False	AATAAA	-33	NA	41662442	41644470	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_41644718_41649994_41650183_41650350_41650440_41652688_41652787_41653481_41653642_41662222
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122452	chr8	-	1209	6	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38788	-1	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_3	72.7532817129234	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633311	43582844	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43593679_43593776_43595725_43595759_43633233
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122463	chr8	-	448	2	Intergenic	novelGene_422	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTCTCATTTTGTTGAA	NA	False	NA	NA	False	NA	NA	NA	43633351	43629747	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_-_43630078_43633233
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122485	chr8	+	1550	8	NNC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	-7	3	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	173.247021943365	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTCTCTGCATGTGTT	NA	False	NA	24	True	AATAAA	-15	NA	43633570	43646921	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_43633650_43636158_43636403_43636739_43636836_43638311_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122536	chr8	-	1965	5	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	2131.08874756543	68	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCAATTTCTGGGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	43760071	43748099	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43758460_43758596_43759877
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122580	chr8	+	1176	5	Intergenic	novelGene_423	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_4	30.1775993080961	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTATGGTTTTTTTT	NA	False	NA	19	True	AATAAA	-19	NA	43806963	43824716	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_+_43807132_43809132_43809201_43811094_43811168_43818030_43818205_43824023
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122616	chr8	+	161	1	NIC	ENSMUSG00000031634.14	novel	1640	12	NA	NA	1572	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAGCTGTGATTTAAAAA	NA	False	NA	6	True	AATAAA	-19	NA	46449736	46449897	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_+_46449700_46449900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122621	chr8	-	935	5	NNC	ENSMUSG00000050914.17	novel	927	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	22.561028345357	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGCATTCTTTACTA	NA	False	NA	NA	False	ATTAAA	-22	NA	46452904	46449938	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_46450163_46450650_46450858_46451433_46451526_46452279_46452441_46452653
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122628	chr8	-	894	5	FSM	ENSMUSG00000050914.17	ENSMUST00000153674.8	884	5	-1	-9	-1	0	multi-exon	FALSE	canonical	3	4	junction_4	25.936219847927	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGCATTCTTTACTA	NA	False	NA	NA	False	ATTAAA	-22	NA	46452905	46449938	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_46450163_46450650_46450858_46451433_46451526_46452287_46452441_46452687
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122644	chr8	-	1447	8	ISM	ENSMUSG00000038291.17	ENSMUST00000176410.8	3275	17	69269	-6	9019	0	3prime_fragment	TRUE	canonical	3	50	junction_2	6.75519452430679	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGTGCTCAAAGGTATT	2375	False	NA	NA	False	AATAAA	-14	NA	46500470	46486302	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_46486860_46487438_46487540_46488574_46488757_46491491_46491559_46494353_46494472_46497004_46497170_46498222_46498337_46500327
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122660	chr8	-	455	1	NIC	ENSMUSG00000031633.5	novel	1925	4	NA	NA	3408	-371	mono-exon	FALSE	NA	NA	NA	NA	NA	393	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCTGCCCTTATTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	46660659	46660204	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_-_46660200_46660700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122674	chr8	+	1646	13	FSM	ENSMUSG00000031629.15	ENSMUST00000034045.15	2931	13	1	1284	1	345	multi-exon	FALSE	canonical	3	263	junction_11	27.7942589995368	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATAGAACGGTTGCTATA	NA	False	NA	14	True	AATAAA	-20	NA	47005063	47031758	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122688	chr8	+	533	1	NIC	ENSMUSG00000031629.15	novel	2931	13	NA	NA	736	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGACTCCTTTTATTTTT	NA	False	NA	18	True	NA	NA	NA	47015498	47016031	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_+_47015500_47016000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122725	chr8	-	2071	11	ISM	ENSMUSG00000038102.16	ENSMUST00000123958.8	3932	23	19274	-2	5605	2	3prime_fragment	TRUE	canonical	3	114	junction_2	18.0930926046378	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCGTAAATACCTTTGG	NA	False	NA	-8	True	AATAAA	-18	NA	47958778	47943160	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122751	chr8	-	2579	3	FSM	ENSMUSG00000038069.7	ENSMUST00000038738.7	3464	3	3	882	2	-781	multi-exon	FALSE	canonical	3	60	junction_1	33.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGTGTTTTTTTTTCT	NA	False	NA	-1	True	ATTAAA	-27	NA	48166964	48163260	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_48165330_48165953_48166054_48166554
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122762	chr8	+	1697	4	FSM	ENSMUSG00000031562.17	ENSMUST00000173991.8	786	4	-14	-897	-11	-3	multi-exon	TRUE	canonical	3	319	junction_1	45.0209827623619	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATAAAGACTGGAAGGTG	NA	False	NA	NA	False	AATAAA	-17	NA	48563185	48591623	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122767	chr8	+	1787	5	NIC	ENSMUSG00000031562.17	novel	2096	6	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	165.171123384204	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTTTGCTTTTATATT	NA	False	NA	10	True	ATTAAA	-16	NA	48563204	48594700	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292_48590410_48593377
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122782	chr8	+	912	1	Genic_Genomic	ENSMUSG00000031562.17	novel	NA	NA	NA	NA	30545	2	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTTTGCTTTTATATTTA	NA	False	NA	12	True	ATTAAA	-18	NA	48593790	48594702	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_+_48593800_48594700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122800	chr8	-	167	1	Intergenic	novelGene_424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTTGGCTTCCATCT	NA	False	NA	NA	False	NA	NA	NA	52908826	52908659	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_-_52908700_52908800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122848	chr8	-	1490	11	NNC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	51.662849321345	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATATGTGCCGATTTT	NA	False	NA	-5	True	AATAAA	-18	NA	57003911	56984556	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003798
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122876	chr8	+	752	3	NNC	ENSMUSG00000096917.3	novel	2618	3	NA	NA	2205	1387	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	67	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCTATTGGTTTTGTT	NA	False	NA	16	True	NA	NA	NA	57943292	57963298	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_57943502_57959561_57959836_57963029
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122884	chr8	+	573	3	NNC	ENSMUSG00000096917.3	novel	298	2	NA	NA	-4	1387	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	13	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCTATTGGTTTTGTT	NA	False	NA	16	True	NA	NA	NA	57958844	57963298	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_57958967_57959561_57959836_57963121
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122917	chr8	+	1083	5	NNC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	25	1280	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2872.6159136752	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTGTGTTTGTATTA	NA	False	NA	4	True	AATAAA	-15	NA	57964965	57967523	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_57965040_57965608_57965783_57966095_57966242_57966323_57966489_57966999
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000122921	chr8	+	1173	4	NIC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	27	1280	intron_retention	FALSE	canonical	3	4513	junction_1	1149.74267652472	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTGTGTTTGTATTA	NA	False	NA	4	True	AATAAA	-15	NA	57964967	57967523	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_+_57965040_57965608_57965783_57966095_57966499_57966999
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123019	chr8	+	1093	5	NNC	ENSMUSG00000031641.15	novel	4309	5	NA	NA	1	95	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	72.6309162822555	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTTGCTAAGAGTATTT	2568	False	NA	16	True	ATTAAA	-16	NA	61940769	61956518	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_61941025_61942973_61943095_61944578_61944709_61948101_61948237_61956066
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123062	chr8	-	723	2	NNC	ENSMUSG00000079042.11	novel	975	4	NA	NA	3439	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGAGTTTATTGTGTGT	NA	False	NA	-21	True	ATTAAA	-21	NA	65486385	65481068	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_65481644_65486237
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123118	chr8	+	1410	4	FSM	ENSMUSG00000031864.17	ENSMUST00000146322.8	1408	4	11	-13	-7	13	multi-exon	FALSE	canonical	3	644	junction_3	36.0030862874591	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTTCAGTTAAGAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	69246618	69251466	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123165	chr8	+	214	1	ISM	ENSMUSG00000031862.12	ENSMUST00000034326.7	3915	26	16373	0	1255	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	NA	False	NA	NA	False	AATAAA	-23	NA	70260185	70260399	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_70260200_70260400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123167	chr8	-	436	2	Antisense	novelGene_ENSMUSG00000036246.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTGGCACACACCTTTAA	NA	False	NA	NA	False	ATTAAA	-22	NA	70266926	70265955	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr8_-_70266112_70266646
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123173	chr8	+	950	6	FSM	ENSMUSG00000031860.18	ENSMUST00000134777.10	931	6	-19	0	9	0	multi-exon	FALSE	canonical	2	8	junction_2	11.2178429299041	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGTGTTTTCAATACAG	2253	False	NA	5	True	ATTAAA	-18	NA	70285320	70324942	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_70285502_70311729_70311804_70319117_70319254_70322678_70322833_70323227_70323335_70324644
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123190	chr8	-	539	4	NNC	ENSMUSG00000036199.10	novel	1251	5	NA	NA	882	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2953.33171557518	2517	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATCGTGGATCCTTAATC	NA	False	NA	-2	True	AATAAA	-35	NA	70354326	70346811	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_70347061_70347153_70347226_70347891_70347971_70354187
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123262	chr8	+	1618	4	ISM	ENSMUSG00000071078.7	ENSMUST00000095273.7	1161	5	-2	-13	-2	3	intron_retention	FALSE	canonical	3	525	junction_3	33.8657480190367	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCATTTGTGGTACTCT	459	False	NA	22	True	NA	NA	NA	70583994	70586402	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_70584250_70584567_70584659_70585061_70585168_70585236
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123331	chr8	-	396	1	ISM	ENSMUSG00000002343.12	ENSMUST00000019679.12	2263	8	13899	0	1723	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTCATTTTTCTCACCT	NA	False	NA	0	True	TTTAAA	-1	NA	70673217	70672821	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_70672800_70673200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123340	chr8	-	1080	3	ISM	ENSMUSG00000002343.12	ENSMUST00000135931.2	1414	4	3042	-5	2719	5	3prime_fragment	FALSE	canonical	3	99	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGTCTGCCTTGTCCTT	7727	False	NA	NA	False	AATAGA	-21	NA	70684057	70677254	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_70678124_70682177_70682261_70683929
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123343	chr8	-	272	1	Genic_Genomic	ENSMUSG00000002343.12	novel	NA	NA	NA	NA	298	2	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCCTTGTCTGCCTTGTC	NA	False	NA	NA	False	AATAGA	-18	NA	70677529	70677257	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_-_70677300_70677500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123379	chr8	+	1131	9	ISM	ENSMUSG00000055681.15	ENSMUST00000066469.14	1300	10	249	-2	-2	-1	intron_retention	FALSE	canonical	3	1246	junction_3	46.5025200930014	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTGATACCCACCAGG	701	False	NA	28	True	AATAAA	-17	NA	70755416	70765642	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123450	chr8	-	648	5	NNC	ENSMUSG00000058833.12	novel	671	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	363.361046343716	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCCCATCAGCTCTGTA	NA	False	NA	-8	True	AATAAA	-17	NA	70959389	70956944	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_70957160_70957633_70957711_70958405_70958611_70959146_70959230_70959321
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123490	chr8	-	919	4	NNC	ENSMUSG00000090137.9	novel	705	4	NA	NA	178	0	at_least_one_novel_splicesite	FALSE	canonical	3	609	junction_3	10346.6067008572	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTCTAGAGTGACTGT	NA	False	NA	-4	True	AATAAA	-28	NA	70962822	70960912	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_70961179_70961945_70962033_70962170_70962285_70962370
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123496	chr8	-	480	4	NNC	ENSMUSG00000090137.9	novel	711	4	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9244.78794901334	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTCTAGAGTGACTGT	NA	False	NA	-4	True	AATAAA	-28	NA	70963017	70960912	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_70961179_70961945_70962016_70962170_70962285_70962987
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123499	chr8	-	546	4	NNC	ENSMUSG00000090137.9	novel	705	4	NA	NA	-339	0	at_least_one_novel_splicesite	FALSE	canonical	2	399	junction_3	10445.5906274157	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTCTAGAGTGACTGT	NA	False	NA	-4	True	AATAAA	-28	NA	70963790	70960912	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_70961179_70961945_70962033_70962170_70962285_70963711
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123561	chr8	-	1125	5	NNC	ENSMUSG00000055553.17	novel	1216	5	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	300.469112389277	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTATAGCAACAGTGGCT	NA	False	NA	-13	True	AATAAA	-20	NA	70975748	70966045	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_70966810_70968044_70968092_70971014_70971168_70972586_70972712_70975712
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123564	chr8	-	1158	5	NNC	ENSMUSG00000055553.17	novel	1216	5	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	297.008733036589	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTATAGCAACAGTGGCT	NA	False	NA	-13	True	AATAAA	-20	NA	70975825	70966045	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_70966819_70968044_70968092_70971014_70971168_70972586_70972712_70975765
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123565	chr8	-	1179	5	NNC	ENSMUSG00000055553.17	novel	1216	5	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	274.595156548691	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTATAGCAACAGTGGCT	NA	False	NA	-13	True	AATAAA	-20	NA	70975748	70966045	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_70966819_70968044_70968092_70970969_70971168_70972586_70972712_70975712
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123567	chr8	-	1058	5	NNC	ENSMUSG00000055553.17	novel	1216	5	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_2	265.155025409665	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTATAGCAACAGTGGCT	NA	False	NA	-13	True	AATAAA	-20	NA	70975748	70966045	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_70966819_70968044_70968092_70971090_70971168_70972586_70972712_70975712
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123588	chr8	+	1705	9	NNC	ENSMUSG00000019428.17	novel	1720	9	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	528.343741682439	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980392	70987978	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_70980491_70982040_70982326_70983589_70983760_70983834_70983924_70984174_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123590	chr8	+	1960	8	NNC	ENSMUSG00000019428.17	novel	1720	9	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_1	458.365107123755	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980392	70987978	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_70980491_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123597	chr8	+	1700	9	NNC	ENSMUSG00000019428.17	novel	1698	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	447.456143102316	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980396	70987978	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_70980493_70982046_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123619	chr8	+	843	1	NIC	ENSMUSG00000019428.17	novel	1720	9	NA	NA	369	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70987135	70987978	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_+_70987100_70988000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123624	chr8	+	1290	1	Genic_Genomic	ENSMUSG00000070002.8	novel	NA	NA	NA	NA	51883	2	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGTTTGAGTATGT	NA	False	NA	10	True	AATAAA	-18	NA	71044220	71045510	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_+_71044200_71045500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123632	chr8	+	1789	10	FSM	ENSMUSG00000019139.11	ENSMUST00000210005.2	1914	10	125	0	116	0	multi-exon	FALSE	canonical	3	316	junction_3	42.074302294634	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTTGTGTGCTTTTTC	NA	False	NA	20	True	AATAAA	-16	NA	71047255	71049940	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123650	chr8	-	1318	3	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_2	115.5	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	684	False	NA	-6	True	AATAAA	-18	NA	71085076	71082042	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_71082825_71083982_71084242_71084799
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123651	chr8	-	903	2	NNC	ENSMUSG00000038508.8	novel	1545	2	NA	NA	1284	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	2299	False	NA	-6	True	AATAAA	-18	NA	71083461	71082042	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_71082825_71083340
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123663	chr8	+	535	3	Intergenic	novelGene_425	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGCGGCAGGCCAGCTA	NA	False	NA	NA	False	AATAAA	-16	NA	71085350	71090555	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_+_71085460_71087687_71087781_71090222
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123698	chr8	+	762	4	NIC	ENSMUSG00000031848.16	novel	925	5	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	158	junction_1	1562.13237453026	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTGTTCTTCTGCCTA	NA	False	NA	20	True	AATAAA	-20	NA	71126018	71131402	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_+_71126108_71130427_71130527_71130603_71130785_71131009
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123699	chr8	+	881	4	NIC	ENSMUSG00000031848.16	novel	925	5	NA	NA	-10	0	intron_retention	FALSE	canonical	3	2963	junction_1	305.690838738895	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTGTTCTTCTGCCTA	NA	False	NA	20	True	AATAAA	-20	NA	71126018	71131402	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_+_71126108_71129204_71129247_71130427_71130785_71131009
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123764	chr8	-	1018	5	FSM	ENSMUSG00000035559.10	ENSMUST00000038626.10	980	5	-35	-3	-35	3	multi-exon	FALSE	canonical	3	649	junction_3	27.2304976083802	682	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGGGTGGGTTCAG	NA	False	NA	1	True	ATTAAA	-20	NA	71213627	71211291	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_71211671_71211754_71211884_71212036_71212114_71213013_71213185_71213365
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123787	chr8	-	974	7	NNC	ENSMUSG00000031838.11	novel	980	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.6123152814555	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTTCCTAGAGTTGG	NA	False	NA	-14	True	AATAAA	-19	NA	71219307	71215417	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_71215686_71215779_71215827_71216371_71216525_71217191_71217285_71217363_71217439_71217563_71217747_71219152
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123789	chr8	-	976	7	NNC	ENSMUSG00000031838.11	novel	980	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	80.4123055812286	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTTCCTAGAGTTGG	NA	False	NA	-14	True	AATAAA	-19	NA	71219307	71215417	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_71215686_71215772_71215827_71216371_71216525_71217191_71217285_71217363_71217434_71217563_71217747_71219152
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123797	chr8	-	999	7	NNC	ENSMUSG00000031838.11	novel	980	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.6123152814555	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTTCCTAGAGTTGG	NA	False	NA	-14	True	AATAAA	-19	NA	71219307	71215417	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_71215704_71215772_71215827_71216371_71216525_71217191_71217285_71217363_71217439_71217563_71217747_71219152
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123804	chr8	+	832	1	FSM	ENSMUSG00000100691.2	ENSMUST00000191396.2	1009	1	-61	238	-61	-238	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTTGGATTTTTCCTTTT	2264	False	NA	21	True	ATTAAA	-22	NA	71229397	71230229	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_71229400_71230200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123859	chr8	-	601	5	NNC	ENSMUSG00000045128.10	novel	679	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11696.6700683357	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350059	71348022	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_71348143_71348239_71348354_71348559_71348690_71348776_71348957_71350002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123864	chr8	-	597	5	NNC	ENSMUSG00000045128.10	novel	1260	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13979.6434950967	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350059	71348022	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_71348152_71348243_71348354_71348559_71348681_71348776_71348957_71350002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123876	chr8	-	588	5	NNC	ENSMUSG00000045128.10	novel	1260	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	12202.6823485658	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350059	71348022	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_71348152_71348243_71348354_71348577_71348690_71348776_71348957_71350002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123879	chr8	-	599	5	NNC	ENSMUSG00000045128.10	novel	1260	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	1194	junction_1	11261.4431440868	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350059	71348022	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_71348152_71348250_71348354_71348559_71348690_71348776_71348957_71350002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123883	chr8	-	474	5	FSM	ENSMUSG00000045128.10	ENSMUST00000212378.2	393	5	-16	-65	-3	0	multi-exon	FALSE	canonical	2	350	junction_4	13656.4517422169	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350059	71348022	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_71348152_71348243_71348354_71348559_71348690_71348776_71348825_71350002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123885	chr8	-	293	3	NIC	ENSMUSG00000045128.10	novel	1260	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	17179	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350056	71348022	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_-_71348152_71348243_71348354_71350002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123886	chr8	-	591	5	NNC	ENSMUSG00000045128.10	novel	1260	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	13793.8079110701	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350059	71348022	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_71348152_71348243_71348354_71348559_71348690_71348776_71348942_71350002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123895	chr8	-	607	5	NNC	ENSMUSG00000045128.10	novel	1260	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12204.1210048082	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350056	71348022	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_71348152_71348243_71348354_71348555_71348690_71348776_71348957_71350002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123941	chr8	-	2115	11	FSM	ENSMUSG00000035439.14	ENSMUST00000035960.13	2013	11	428	-530	-28	530	multi-exon	FALSE	canonical	3	458	junction_6	24.6578587878185	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTCTTGGTCATGAAG	566	False	NA	-1	True	NA	NA	NA	71725150	71703238	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71724927
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123956	chr8	-	1519	10	NIC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	-27	1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_4	154.696676526663	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTGTGATGCGTTTGT	567	False	NA	-8	True	NA	NA	NA	71725149	71703767	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71724927
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123959	chr8	-	1588	11	NNC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	-28	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	150.949527988662	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTGTGATGCGTTTGT	566	False	NA	-8	True	NA	NA	NA	71725150	71703767	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_71704189_71705712_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71724927
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000123989	chr8	+	858	6	NNC	ENSMUSG00000002395.15	novel	854	8	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	342.602043192973	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATGTCTTCAGTGCTA	NA	False	NA	21	True	AATAAA	-22	NA	71819864	71822375	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_71820014_71820287_71820338_71820413_71820493_71820602_71820806_71821775_71821948_71822170
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124071	chr8	+	1360	9	NNC	ENSMUSG00000031820.10	novel	1433	9	NA	NA	0	-69	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	103.031472740129	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGTGTCACTTTGGGC	NA	False	NA	20	True	AATAAA	-22	NA	71849504	71857194	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_71849665_71850326_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855619_71855707_71856838
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124073	chr8	+	1355	9	NNC	ENSMUSG00000031820.10	novel	1433	9	NA	NA	6	-69	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_7	111.202236937932	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGTGTCACTTTGGGC	NA	False	NA	20	True	AATAAA	-22	NA	71849510	71857194	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_71849665_71850322_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855622_71855707_71856838
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124108	chr8	+	648	2	NNC	ENSMUSG00000034880.8	novel	607	2	NA	NA	-31	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATGTATTAACTTACAGT	8889	False	NA	24	True	AATAAA	-24	NA	71917571	71918397	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_71917716_71917893
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124117	chr8	+	507	1	Genic_Genomic	ENSMUSG00000034880.8	novel	NA	NA	NA	NA	288	6	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATGTATTAACTTACAGT	9208	False	NA	24	True	AATAAA	-24	NA	71917890	71918397	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_+_71917900_71918400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124130	chr8	+	862	4	FSM	ENSMUSG00000074247.11	ENSMUST00000147642.2	1865	4	-3	1006	3	118	multi-exon	FALSE	canonical	1	1	junction_3	377.602966090045	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCGTCTTTGCTCCGCA	NA	False	NA	18	True	AATAAA	-19	NA	71921845	71927736	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_71921970_71924680_71924762_71924838_71924891_71927131
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124171	chr8	-	229	1	NIC	ENSMUSG00000046718.9	novel	792	5	NA	NA	2848	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTGCTTCTAAGTTGCT	NA	False	NA	NA	False	AATAAA	-17	NA	71987127	71986898	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_-_71986900_71987100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124182	chr8	+	1078	9	NNC	ENSMUSG00000031813.9	novel	1062	9	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	134.053860444226	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGAGTGTATTGTTTT	NA	False	NA	11	True	AGTAAA	-18	NA	71995561	72000670	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_71995702_71995776_71995876_71996030_71996128_71997867_71997999_71998190_71998311_71998393_71998501_71999616_71999679_72000221_72000279_72000405
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124214	chr8	+	1301	1	ISM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	12613	0	2928	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGGGTTTGGTGCCCC	NA	False	NA	30	True	ATTAAA	-22	NA	72076254	72077555	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_72076300_72077600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124218	chr8	-	935	8	NIC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	7	2	combination_of_known_junctions	FALSE	canonical	3	45	junction_6	3.4166459266004	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGTGTTATATATAACAAG	NA	False	NA	0	True	NA	NA	NA	72124394	72112987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_-_72113294_72114462_72114496_72115124_72115180_72115498_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72124269
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124234	chr8	-	650	2	ISM	ENSMUSG00000070000.14	ENSMUST00000093444.13	3073	26	11923	254	1722	12	intron_retention	FALSE	canonical	3	199	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAATCCTCTTTCCGGTTC	926	False	NA	-3	True	AATAAA	-22	NA	72162028	72161284	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_72161476_72161569
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124252	chr8	+	356	3	ISM	ENSMUSG00000052446.18	ENSMUST00000109997.10	2713	4	6	4089	0	0	5prime_fragment	FALSE	canonical	3	359	junction_2	51	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTTTGTTTGTTTGTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	72704920	72720088	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_72705005_72719637_72719765_72719943
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124253	chr8	+	2707	4	FSM	ENSMUSG00000052446.18	ENSMUST00000109997.10	2713	4	6	0	0	0	multi-exon	FALSE	canonical	3	347	junction_3	51.1468474101777	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704920	72724177	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_72705005_72719637_72719765_72719943_72720005_72721742
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124280	chr8	+	926	1	ISM	ENSMUSG00000031799.11	ENSMUST00000003575.11	2158	8	16988	0	16409	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGATTTATTCTTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	72906060	72906986	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_72906100_72907000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124293	chr8	+	1642	4	FSM	ENSMUSG00000003039.10	ENSMUST00000003123.10	2564	4	-30	952	-30	36	multi-exon	FALSE	canonical	3	920	junction_3	34.4705993887867	2578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTGGGGTTTTTTGTT	NA	False	NA	54	True	NA	NA	NA	72973543	72977310	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_72973705_72973784_72973927_72975771_72975826_72976025
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124305	chr8	+	1147	4	NNC	ENSMUSG00000003039.10	novel	2564	4	NA	NA	15	-407	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	453.197038334934	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTGTGAATGTTGTCTG	NA	False	NA	15	True	AATAAA	-15	NA	72973588	72976867	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_72973705_72973791_72973927_72975771_72975826_72976025
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124326	chr8	-	491	1	FSM	ENSMUSG00000070713.6	ENSMUST00000075602.8	1151	1	-37	697	-37	-697	mono-exon	FALSE	NA	NA	NA	NA	NA	1979	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTAAGCTATATTG	NA	False	NA	NA	False	TATAAA	-25	NA	73059141	73058650	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_73058600_73059100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124353	chr8	+	263	1	ISM	ENSMUSG00000052794.14	ENSMUST00000064853.13	2887	8	16399	460	2389	-100	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCTGCTTGTTTA	NA	False	NA	6	True	AGTAAA	-21	NA	73214122	73214385	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_73214100_73214400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124401	chr8	+	1030	7	NNC	ENSMUSG00000031622.17	novel	1024	7	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	255.544788420521	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTGCAGCAGTGTCGA	NA	False	NA	29	True	AATAAA	-26	NA	73449915	73466539	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_73450041_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73466357
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124427	chr8	+	1641	5	FSM	ENSMUSG00000005413.9	ENSMUST00000005548.8	1569	5	-60	-12	-60	12	multi-exon	FALSE	canonical	0	0	junction_1	104.358456772798	400	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTCTATGCTGTCTAT	NA	False	NA	22	True	AATAAA	-31	NA	75820188	75827229	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_75820401_75822483_75822605_75823477_75823970_75825393_75825494_75826513
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124486	chr8	-	1625	2	NNC	ENSMUSG00000037070.11	novel	1695	2	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTCTTGATTTCTCC	NA	False	NA	NA	False	AGTAAA	-18	NA	79235512	79231897	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_79233438_79235427
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124493	chr8	-	1730	2	FSM	ENSMUSG00000037070.11	ENSMUST00000049245.10	1695	2	-35	0	-35	0	multi-exon	FALSE	canonical	3	249	junction_1	0	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTCTTGATTTCTCC	NA	False	NA	NA	False	AGTAAA	-18	NA	79235562	79231897	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_79233493_79235427
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124506	chr8	-	1173	1	ISM	ENSMUSG00000031683.17	ENSMUST00000130325.8	3792	5	13407	1696	2477	-110	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCTCGTGGTCTGTGAA	NA	False	NA	0	True	NA	NA	NA	79534362	79533189	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_79533200_79534400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124507	chr8	-	2005	4	FSM	ENSMUSG00000031683.17	ENSMUST00000051867.7	2107	4	-8	110	-8	-110	multi-exon	FALSE	canonical	3	383	junction_3	374.138417641861	2130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCTCGTGGTCTGTGAA	NA	False	NA	0	True	NA	NA	NA	79547777	79533189	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79547676
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124517	chr8	-	754	6	NNC	ENSMUSG00000031683.17	novel	3792	5	NA	NA	17	3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	521.838059171617	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTCAGTCTTTATC	NA	False	NA	-4	True	NA	NA	NA	79547752	79534662	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_79534875_79536575_79536690_79539604_79539710_79542263_79542412_79546615_79546715_79547676
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124536	chr8	-	311	1	NIC	ENSMUSG00000037022.4	novel	5650	7	NA	NA	26463	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTAGAGTTTCCCTGAG	NA	False	NA	-5	True	AATAAA	-18	NA	79994846	79994535	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_-_79994500_79994800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124579	chr8	+	848	5	NNC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	-20	8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	236.229231891398	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAGTCAATCTTTAAAT	NA	False	NA	10	True	AATAAA	-28	NA	80438428	80501979	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_80438474_80439733_80439909_80446286_80446378_80455761_80455880_80501560
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124580	chr8	+	676	4	NIC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	-20	8	combination_of_known_splicesites	FALSE	canonical	1	7	junction_1	234.810561943027	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAGTCAATCTTTAAAT	NA	False	NA	10	True	AATAAA	-28	NA	80438428	80501979	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_+_80438474_80446286_80446378_80455758_80455880_80501560
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124595	chr8	+	765	4	NIC	ENSMUSG00000036977.9	novel	4591	5	NA	NA	-4	8	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	219.624426894844	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAGTCAATCTTTAAAT	NA	False	NA	10	True	AATAAA	-28	NA	80438475	80501979	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_+_80438604_80439781_80439909_80446286_80446378_80501560
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124614	chr8	+	135	1	Intergenic	novelGene_426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTGTGCTTTTTAAACA	4400	False	NA	NA	False	NA	NA	NA	81347109	81347244	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_+_81347100_81347200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124619	chr8	-	1750	1	Genic_Genomic	ENSMUSG00000031714.10	novel	NA	NA	NA	NA	64704	7	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTACTTTTTTCTTA	NA	False	NA	0	True	AATAAA	-24	NA	81492809	81491059	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_-_81491100_81492800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124630	chr8	+	537	4	Intergenic	novelGene_427	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	7	junction_2	4.24264068711928	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGTGTGTCTGTGT	1274	False	NA	NA	False	NA	NA	NA	81668463	81684741	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_+_81668523_81668661_81668823_81677185_81677329_81684567
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124637	chr8	+	407	3	ISM	ENSMUSG00000037940.18	ENSMUST00000216387.2	585	6	39776	49253	-6186	5	internal_fragment	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATGTGGTGTTTTTTGA	NA	False	NA	NA	False	ATTAAA	-16	NA	82610761	82629576	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_82610874_82617339_82617413_82629354
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124655	chr8	-	1570	8	FSM	ENSMUSG00000031711.8	ENSMUST00000211462.2	761	8	-31	-778	0	1	multi-exon	FALSE	canonical	2	30	junction_6	164.077259054311	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTTTGGTACTGAGTTC	NA	False	NA	-16	True	AATAAA	-18	NA	83500774	83490248	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83499508_83499641_83500685
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124674	chr8	-	1828	4	FSM	ENSMUSG00000063253.12	ENSMUST00000212031.2	409	4	-33	-1386	-31	9	multi-exon	FALSE	canonical	3	281	junction_1	12.1928941054479	507	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTTTTGATACACT	7386	False	NA	7	True	AATAAA	-25	NA	84169167	84161114	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_84162670_84164181_84164266_84164613_84164686_84169050
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124695	chr8	+	194	1	ISM	ENSMUSG00000033938.6	ENSMUST00000036996.6	623	3	4762	0	4675	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATCTGTGCTACTTCAA	NA	False	NA	23	True	AATAAA	-23	NA	84298061	84298255	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_84298100_84298300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124714	chr8	-	1154	13	NNC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_11	1094.04550928601	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGTGTGTTCTTTAGG	NA	False	NA	-3	True	AATAAA	-15	NA	84321104	84298326	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300548_84301106_84301158_84320968
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124725	chr8	-	1214	12	NIC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	10	0	intron_retention	FALSE	canonical	3	3555	junction_3	311.093911042314	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGTGTGTTCTTTAGG	NA	False	NA	-3	True	AATAAA	-15	NA	84321084	84298326	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124779	chr8	+	1643	11	FSM	ENSMUSG00000005481.19	ENSMUST00000019576.15	1656	11	19	-6	19	6	multi-exon	FALSE	canonical	3	2216	junction_5	95.6715736256073	2598	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCCATCTTTTTTATCAA	NA	False	NA	105	True	NA	NA	NA	84441824	84449983	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124811	chr8	-	1527	11	ISM	ENSMUSG00000002885.15	ENSMUST00000109802.3	2867	19	-10	4175	0	9	5prime_fragment	FALSE	canonical	3	115	junction_7	23.9768638483018	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGGGTGTGTGTGGTG	NA	False	NA	NA	False	AATAAA	-45	NA	84467812	84454167	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124846	chr8	+	776	1	Genic_Genomic	ENSMUSG00000047986.13	novel	NA	NA	NA	NA	3453	8	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTAATTTATT	NA	False	NA	19	True	ATTAAA	-32	NA	84756156	84756932	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_+_84756200_84756900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124859	chr8	-	545	3	ISM	ENSMUSG00000036686.17	ENSMUST00000117424.9	3262	28	14324	11	3247	-2	3prime_fragment	FALSE	canonical	3	73	junction_2	18	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGCCTCAGCTTTGTCT	NA	False	NA	-12	True	AATGAA	-13	NA	84860170	84859467	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_84859887_84859960_84860009_84860092
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124863	chr8	-	792	2	FSM	ENSMUSG00000056155.7	ENSMUST00000070102.6	730	2	-57	-5	-57	3	multi-exon	FALSE	canonical	3	6	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGGACAAGGTGGTATG	NA	False	NA	0	True	AATAAA	-20	NA	84903238	84900356	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_84900602_84902691
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124888	chr8	-	631	3	NNC	ENSMUSG00000019362.9	novel	616	3	NA	NA	-8	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	882	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTGTTTGGTGCT	9826	False	NA	-4	True	AATAAA	-15	NA	84976356	84972863	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_84973323_84976098_84976159_84976244
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124903	chr8	-	1213	5	FSM	ENSMUSG00000004996.10	ENSMUST00000126435.8	2819	5	32	1574	32	-458	multi-exon	FALSE	canonical	3	192	junction_2	18.1159460144923	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATCTTCACCCACACTC	6998	False	NA	0	True	AATAAA	-22	NA	84983921	84978108	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_84978341_84980491_84980717_84980804_84980982_84982872_84983049_84983518
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124934	chr8	+	2137	17	FSM	ENSMUSG00000001909.17	ENSMUST00000001974.11	2567	17	409	21	3	0	multi-exon	FALSE	canonical	3	179	junction_1	103.16006979447	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415903	85426416	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_85416006_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124941	chr8	+	2102	17	FSM	ENSMUSG00000001909.17	ENSMUST00000109767.9	2138	17	36	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	116.091541869983	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415911	85426416	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_85415979_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124958	chr8	+	763	2	FSM	ENSMUSG00000074203.5	ENSMUST00000098571.5	721	2	-38	-4	-38	4	multi-exon	FALSE	canonical	2	3	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGGCTCACATCTGTAA	NA	False	NA	NA	False	ATTAAA	-19	NA	85449597	85453477	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_85449901_85453017
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124976	chr8	+	372	1	NIC	ENSMUSG00000033751.6	novel	2494	2	NA	NA	2582	-1007	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCCTCAAGTTGTGACT	5256	False	NA	36	True	AATAAA	-31	NA	85560732	85561104	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_+_85560700_85561100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000124994	chr8	-	1886	9	NNC	ENSMUSG00000003814.9	novel	2184	9	NA	NA	-39	-237	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	438.293779901107	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCTCCTTCTCTGGGA	NA	False	NA	0	True	ATTAAA	-22	NA	85573498	85568715	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571198_85571413_85571499_85571595_85572490_85572695_85572878_85572981_85573336
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125002	chr8	-	764	1	NIC	ENSMUSG00000003814.9	novel	2184	9	NA	NA	2066	-237	mono-exon	FALSE	NA	NA	NA	NA	NA	519	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCTCCTTCTCTGGGA	NA	False	NA	0	True	ATTAAA	-22	NA	85569479	85568715	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_-_85568700_85569500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125015	chr8	-	1870	9	NNC	ENSMUSG00000003814.9	novel	2184	9	NA	NA	-39	-241	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	437.138976041945	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTGTCTCCTTCTCT	NA	False	NA	-4	True	ATTAAA	-18	NA	85573498	85568719	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571202_85571413_85571499_85571595_85572490_85572687_85572878_85572981_85573336
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125025	chr8	+	1831	13	FSM	ENSMUSG00000003808.19	ENSMUST00000003906.13	1826	13	-5	0	-5	0	multi-exon	FALSE	canonical	3	551	junction_9	56.0676055212713	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTGTCATTCATTTCA	NA	False	NA	38	True	AATAAA	-38	NA	85583612	85595886	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125035	chr8	+	374	1	ISM	ENSMUSG00000003808.19	ENSMUST00000003906.13	1826	13	11895	0	1321	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTGTCATTCATTTCA	NA	False	NA	38	True	AATAAA	-38	NA	85595512	85595886	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_85595500_85595900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125060	chr8	+	620	4	NNC	ENSMUSG00000003824.13	novel	685	4	NA	NA	9	-50	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	813.468841170672	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATACTTTATTCC	NA	False	NA	31	True	ATTAAA	-14	NA	85598830	85614025	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_85598887_85599348_85599462_85612563_85612753_85613763
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125067	chr8	+	715	5	NNC	ENSMUSG00000003824.13	novel	1686	5	NA	NA	15	11905	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	588.200380397701	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCACAGTGTCCTGTGAC	NA	False	NA	NA	False	NA	NA	NA	85598836	85626755	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_85598883_85599348_85599462_85612563_85612753_85620169_85620291_85626509
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125068	chr8	+	757	5	NNC	ENSMUSG00000003824.13	novel	1686	5	NA	NA	15	-50	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	717.273483407828	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATACTTTATTCC	NA	False	NA	31	True	ATTAAA	-14	NA	85598836	85614025	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_85598883_85599348_85599462_85610059_85610214_85612570_85612753_85613763
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125081	chr8	-	2141	12	FSM	ENSMUSG00000003809.15	ENSMUST00000109745.8	2114	12	-21	-6	-21	6	multi-exon	FALSE	canonical	3	204	junction_11	27.3803935401452	348	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGCTTCTCAATCTAGA	NA	False	NA	1	True	AATAAA	-15	NA	85620571	85613015	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183_85620314_85620370
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125121	chr8	+	683	2	ISM	ENSMUSG00000003812.14	ENSMUST00000128400.2	4073	7	4587	-2	-83	2	3prime_fragment	FALSE	canonical	3	74	junction_1	0	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTCTTTCATCTAGAG	NA	False	NA	NA	False	NA	NA	NA	85639936	85641152	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_85640158_85640690
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125137	chr8	+	270	1	ISM	ENSMUSG00000003812.14	ENSMUST00000128400.2	4073	7	5528	3	858	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCTTTTCTCTTTCATC	NA	False	NA	NA	False	NA	NA	NA	85640877	85641147	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_85640900_85641100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125197	chr8	+	1015	6	NNC	ENSMUSG00000005161.16	novel	1612	6	NA	NA	-30	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1875.57931317233	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTTGGTGTGTGTTT	NA	False	NA	19	True	AATAAA	-19	NA	85696292	85700946	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_85696392_85696780_85696974_85697064_85697216_85697915_85698039_85698190_85698322_85700628
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125219	chr8	+	320	1	NIC	ENSMUSG00000005161.16	novel	1612	6	NA	NA	2542	6	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTTGGTGTGTGTTT	NA	False	NA	19	True	AATAAA	-19	NA	85700626	85700946	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_+_85700600_85700900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125225	chr8	-	1816	1	FSM	ENSMUSG00000052837.8	ENSMUST00000064922.7	1809	1	-7	0	-7	0	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGGTCTCTTTTTTC	NA	False	NA	-1	True	AGTAAA	-21	NA	85705354	85703538	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_85703500_85705400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125241	chr8	-	548	3	NNC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1046.5	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTCAGTGGATGGG	8394	False	NA	-2	True	AATAAA	-16	NA	85751916	85744557	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_85744771_85750802_85750955_85751733
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125262	chr8	-	1269	7	NNC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	902.492967039387	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTGTCAGTGGATG	8395	False	NA	-4	True	AATAAA	-14	NA	85751915	85744559	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_85744885_85745150_85745349_85745439_85745548_85746146_85746302_85746388_85746538_85750802_85750955_85751733
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125294	chr8	+	415	1	Genic_Genomic	ENSMUSG00000041203.10	novel	NA	NA	NA	NA	3050	1	mono-exon	FALSE	NA	NA	NA	NA	NA	380	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCTTGGTTTATCTTC	NA	False	NA	22	True	AGTAAA	-22	NA	85756501	85756916	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_+_85756500_85756900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125301	chr8	+	1869	10	FSM	ENSMUSG00000008167.15	ENSMUST00000095220.4	1907	10	38	0	-4	0	multi-exon	TRUE	canonical	3	54	junction_4	11.5864970366477	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTGTGAGCTTTCTGT	NA	False	NA	22	True	AATAAA	-22	NA	85786721	85793750	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791126_85791209_85791302_85792449_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125306	chr8	+	1376	9	FSM	ENSMUSG00000060038.15	ENSMUST00000078665.13	1333	9	-36	-7	-36	7	multi-exon	FALSE	canonical	3	191	junction_2	36.5391485259304	556	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGTGTCAGGTCCGTA	NA	False	NA	30	True	AATAAA	-36	NA	85798349	85801798	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_85798683_85799080_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125329	chr8	-	184	1	Genic_Genomic	ENSMUSG00000005150.17	novel	NA	NA	NA	NA	890	1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTAGTCTTCATTCTTC	NA	False	NA	-1	True	AATAAA	-36	NA	85801846	85801662	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_-_85801700_85801800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125449	chr8	-	1465	4	NNC	ENSMUSG00000036934.10	novel	1587	4	NA	NA	0	-95	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	135.750588294203	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAAGTAGTGTGGTGTAG	NA	False	NA	-1	True	AATAAA	-22	NA	86159443	86135482	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_86136512_86138741_86138925_86153488_86153586_86159287
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125458	chr8	+	191	1	Intergenic	novelGene_428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAATGTACTGAAATTTG	NA	False	NA	7	True	TTTAAA	-1	NA	86198376	86198567	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_+_86198400_86198600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125493	chr8	+	318	1	Intergenic	novelGene_429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTCATTTTTACTAGTAA	NA	False	NA	NA	False	AATAAA	-24	NA	86550924	86551242	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_+_86550900_86551200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125497	chr8	+	1115	1	ISM	ENSMUSG00000036879.16	ENSMUST00000053771.14	5351	32	218529	731	23885	4	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTCTGCTTTCCAATT	NA	False	NA	12	True	NA	NA	NA	86786159	86787274	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_86786200_86787300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125500	chr8	+	2837	15	FSM	ENSMUSG00000047866.21	ENSMUST00000034141.18	2859	15	27	-5	27	4	multi-exon	TRUE	canonical	3	174	junction_5	34.038693468775	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTCTCCAGTGGGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	87350698	87443264	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_87351045_87358013_87358249_87360496_87360629_87361424_87361548_87363106_87363271_87364530_87364626_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530_87440722_87442877
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125519	chr8	+	547	1	FSM	ENSMUSG00000066362.6	ENSMUST00000183478.2	538	1	-3	-6	-3	6	mono-exon	FALSE	NA	NA	NA	NA	NA	1642	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGACACTAAAGAGGAGC	NA	False	NA	43	True	AATAAA	-32	NA	87774313	87774860	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_87774300_87774900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125524	chr8	-	535	1	Antisense	novelGene_ENSMUSG00000066362.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTGTCTGAGATCTTAA	NA	False	NA	NA	False	NA	NA	NA	87774859	87774324	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr8_-_87774300_87774900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125528	chr8	+	545	4	FSM	ENSMUSG00000097248.10	ENSMUST00000182174.8	498	4	-45	-2	-45	1	multi-exon	FALSE	canonical	3	132	junction_1	31.0590834807897	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGTCCATTCCTCCTG	153	False	NA	8	True	AATAAA	-16	NA	88199394	88252183	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_88199589_88248363_88248442_88250923_88251056_88252042
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125563	chr8	+	1088	1	Genic_Genomic	ENSMUSG00000036779.13	novel	NA	NA	NA	NA	6668	5	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCCTGCTCATTTGTTC	NA	False	NA	19	True	AGTAAA	-20	NA	88985267	88986355	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_+_88985300_88986400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125587	chr8	-	2334	5	Intergenic	novelGene_430	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_4	28.6574597618142	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCCATTTTTTATTG	NA	False	NA	NA	False	AATAAA	-15	NA	89779654	89772259	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_-_89774095_89774349_89774422_89775330_89775532_89776215_89776356_89779568
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125611	chr8	-	176	1	Intergenic	novelGene_431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAATCCCAAATAT	NA	False	NA	NA	False	NA	NA	NA	89807005	89806829	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_-_89806800_89807000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125616	chr8	-	186	1	Intergenic	novelGene_432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATAATGAATCCCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	91554538	91554352	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_-_91554400_91554500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125632	chr8	-	1750	10	FSM	ENSMUSG00000031667.17	ENSMUST00000125257.3	2079	10	10	319	6	-319	multi-exon	TRUE	canonical	3	258	junction_9	63.7020456287233	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGAAAGTAATGCTCCT	NA	False	NA	-10	True	AATAAA	-26	NA	91860645	91850515	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91860527
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125641	chr8	-	768	1	ISM	ENSMUSG00000033282.15	ENSMUST00000047783.14	7009	26	95094	371	24156	-371	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTGTTCCTGCCATTC	NA	False	NA	NA	False	AATAAA	-43	NA	91944796	91944028	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_91944000_91944800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125654	chr8	-	850	1	Intergenic	novelGene_433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCTTGAACTCTTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	92326422	92325572	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_-_92325600_92326400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125664	chr8	+	860	1	NIC	ENSMUSG00000031740.9	novel	3078	13	NA	NA	8611	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGCTCTGTTTTAGC	NA	False	NA	4	True	AATAAA	-19	NA	93579188	93580048	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_+_93579200_93580000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125710	chr8	+	409	1	ISM	ENSMUSG00000033009.16	ENSMUST00000109556.9	5310	13	27064	3251	9203	-3251	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTCGTTCTGTAGTAA	9716	False	NA	13	True	NA	NA	NA	94790889	94791298	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_94790900_94791300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125720	chr8	+	405	3	FSM	ENSMUSG00000031760.10	ENSMUST00000034211.10	536	3	133	-2	-6	2	multi-exon	FALSE	canonical	3	14	junction_2	1	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGACTGGTCTCTTTTT	NA	False	NA	9	True	AATAAA	-19	NA	94879367	94880776	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_94879459_94879652_94879719_94880528
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125734	chr8	+	376	3	NNC	ENSMUSG00000031762.8	novel	511	3	NA	NA	-79	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6879	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCTCTGTGCATTGGT	NA	False	NA	37	True	AATAAA	-23	NA	94899408	94900196	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_94899504_94899754_94899803_94899963
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125743	chr8	+	789	1	Genic_Genomic	ENSMUSG00000031762.8	novel	NA	NA	NA	NA	-79	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5101	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTCTGTGCATTGGTT	NA	False	NA	38	True	AATAAA	-24	NA	94899408	94900197	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_+_94899400_94900200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125746	chr8	+	459	3	NNC	ENSMUSG00000031762.8	novel	511	3	NA	NA	-78	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	6740.5	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCTCTGTGCATTGGT	NA	False	NA	37	True	AATAAA	-23	NA	94899409	94900196	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_94899504_94899688_94899821_94899963
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125748	chr8	+	393	3	NNC	ENSMUSG00000031762.8	novel	511	3	NA	NA	-78	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6879	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGCTTGTCTCTGTGCAT	NA	False	NA	33	True	AATAAA	-19	NA	94899409	94900192	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_94899504_94899754_94899825_94899963
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125755	chr8	-	359	2	Genic_Genomic	ENSMUSG00000110588.2	novel	2665	1	NA	NA	-152	-2034	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAGCACGCGGAGCGCG	NA	False	NA	NA	False	NA	NA	NA	94900192	94899409	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_-_94899538_94899961
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125812	chr8	+	354	2	NNC	ENSMUSG00000031765.9	novel	633	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTTTCTTGGTGTGG	NA	False	NA	29	True	AATAAA	-18	NA	94905868	94906955	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_94905967_94906699
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125814	chr8	+	381	3	NNC	ENSMUSG00000031765.9	novel	549	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7415.5	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTTTCTTGGTGTGG	NA	False	NA	29	True	AATAAA	-18	NA	94905868	94906955	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_94905967_94906450_94906508_94906729
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125815	chr8	+	324	2	NIC	ENSMUSG00000031765.9	novel	549	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTTTCTTGGTGTGG	NA	False	NA	29	True	AATAAA	-18	NA	94905868	94906955	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_+_94905967_94906729
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125827	chr8	+	373	2	NNC	ENSMUSG00000031765.9	novel	633	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTTTCTTGGTGTGG	NA	False	NA	29	True	AATAAA	-18	NA	94905868	94906955	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_94905986_94906699
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125851	chr8	+	207	1	Intergenic	novelGene_434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGTTGAAGAGATGGC	466	False	NA	NA	False	AAAAAG	-7	NA	94924163	94924370	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_+_94924200_94924400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125853	chr8	+	2720	22	FSM	ENSMUSG00000032939.15	ENSMUST00000079961.14	2707	22	-11	-2	-11	2	multi-exon	FALSE	canonical	3	950	junction_1	70.7360075664432	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTCCTTTTTTTTTT	NA	False	NA	28	True	AATAAA	-29	NA	94941180	95041490	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125860	chr8	+	965	1	FSM	ENSMUSG00000110679.2	ENSMUST00000212707.2	642	1	-42	-281	-42	281	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAACCTTCACATGTT	NA	False	NA	NA	False	NA	NA	NA	94949578	94950543	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_94949600_94950500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125889	chr8	-	1677	8	NNC	ENSMUSG00000031774.9	novel	828	9	NA	NA	-8	717	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	220.053796762037	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTAGAGAAGCAAACTTAC	3853	False	NA	-4	True	AATAAA	-23	NA	95328362	95301567	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313942_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328262
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125891	chr8	-	1766	8	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	0	717	intron_retention	FALSE	canonical	0	0	junction_3	171.915855070118	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTAGAGAAGCAAACTTAC	3886	False	NA	-4	True	AATAAA	-23	NA	95328329	95301567	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313958_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125955	chr8	+	758	1	ISM	ENSMUSG00000031782.16	ENSMUST00000034234.15	1789	9	15817	0	623	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTTGTTTTGTCTAT	NA	False	NA	9	True	AATAAA	-15	NA	95580765	95581523	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_95580800_95581500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000125991	chr8	+	347	1	ISM	ENSMUSG00000031783.11	ENSMUST00000109521.4	1580	9	6120	326	1854	175	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTCATCGTGCCACTAAC	NA	False	NA	32	True	AATAAA	-23	NA	95590197	95590544	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_95590200_95590500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126015	chr8	+	177	1	Genic_Genomic	ENSMUSG00000031792.16	novel	NA	NA	NA	NA	2179	2	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTGTCTTATTTTAAAC	NA	False	NA	14	True	AATAAA	-15	NA	96073960	96074137	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_+_96074000_96074100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126022	chr8	+	189	1	Intergenic	novelGene_435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAATGCATCATGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	96127336	96127525	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_+_96127300_96127500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126025	chr8	-	270	1	Genic_Genomic	ENSMUSG00000031796.8	novel	NA	NA	NA	NA	1019	4	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTACTTTTTTATATGAT	NA	False	NA	-2	True	AATAAA	-28	NA	96147142	96146872	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_-_96146900_96147100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126057	chr8	+	2467	3	FSM	ENSMUSG00000031669.11	ENSMUST00000034094.11	2519	3	53	-1	-48	1	multi-exon	FALSE	canonical	3	97	junction_2	2	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTTGTCACTAACTGT	NA	False	NA	NA	False	AATAAA	-15	NA	96360133	96371689	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_96360412_96364437_96364672_96369734
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126066	chr8	+	1372	7	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	-9	-3	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	132.221720353856	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTCAAACTTTCTTTAG	NA	False	NA	36	True	AATAAA	-23	NA	96442533	96445635	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_+_96442592_96442980_96443123_96443234_96443430_96443548_96443670_96444548_96444730_96444820_96444964_96445103
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126083	chr8	+	499	1	ISM	ENSMUSG00000031671.12	ENSMUST00000034096.6	1707	7	2628	3	1500	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTCAAACTTTCTTTAG	NA	False	NA	36	True	AATAAA	-23	NA	96445136	96445635	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_96445100_96445600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126096	chr8	-	385	3	NNC	ENSMUSG00000110489.2	novel	338	3	NA	NA	-18	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	187	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTATGAGAGGTTACGTC	NA	False	NA	8	True	TTTAAA	-13	NA	96544337	96535167	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_96535388_96539047_96539129_96544253
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126105	chr8	-	217	1	Genic_Genomic	ENSMUSG00000110489.2	novel	NA	NA	NA	NA	8917	7	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTACTGGTATGAGAGGTT	NA	False	NA	3	True	TTTAAA	-8	NA	96535389	96535172	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_-_96535200_96535400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126118	chr8	+	731	2	Genic_Genomic	ENSMUSG00000061104.6	novel	789	1	NA	NA	8	25657	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTGGTGGTACATGCCTT	NA	False	NA	NA	False	NA	NA	NA	96551981	96578419	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_+_96552693_96578399
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126124	chr8	-	3293	12	FSM	ENSMUSG00000036534.7	ENSMUST00000212270.2	3315	12	26	-4	9	0	multi-exon	FALSE	canonical	3	212	junction_11	48.4964001390441	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	0	True	AATAAA	-19	NA	96580141	96562547	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126129	chr8	-	946	1	Genic_Genomic	ENSMUSG00000031672.9	novel	NA	NA	NA	NA	2970	4	mono-exon	FALSE	NA	NA	NA	NA	NA	427	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCTACTTACT	NA	False	NA	0	True	AATAAA	-21	NA	96591703	96590757	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_-_96590800_96591700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126145	chr8	+	718	3	Intergenic	novelGene_436	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTACTTGCTTCTTTTCC	NA	False	NA	NA	False	TATAAA	-26	NA	97845768	97865285	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_+_97845943_97849393_97849496_97864843
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126174	chr8	+	632	4	NNC	ENSMUSG00000054400.17	novel	667	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	124.763776794389	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGCAGATCTCCTT	4831	False	NA	10	True	ATTAAA	-22	NA	104977531	104990079	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_104977728_104983916_104984076_104988105_104988206_104989902
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126176	chr8	+	864	2	FSM	ENSMUSG00000054400.17	ENSMUST00000212433.2	1304	2	21	419	0	-419	multi-exon	FALSE	canonical	3	282	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATCCTTTTCTCATACA	4834	False	NA	NA	False	NA	NA	NA	104977534	104984587	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_104977728_104983916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126183	chr8	+	612	4	NIC	ENSMUSG00000054400.17	novel	750	5	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	130.420686838996	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTCTGCAGATCTCC	4863	False	NA	8	True	ATTAAA	-20	NA	104977563	104990077	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_+_104977728_104983916_104984076_104988799_104988914_104989902
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126187	chr8	+	178	1	NIC	ENSMUSG00000054400.17	novel	667	4	NA	NA	1123	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGCAGATCTCCTT	NA	False	NA	10	True	ATTAAA	-22	NA	104989901	104990079	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_+_104989900_104990100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126194	chr8	+	597	1	ISM	ENSMUSG00000031875.8	ENSMUST00000034343.5	1616	5	6482	0	2035	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGAGTGCGCCTGACT	NA	False	NA	13	True	ATTAAA	-15	NA	105073707	105074304	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_105073700_105074300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126198	chr8	-	286	1	ISM	ENSMUSG00000096188.2	ENSMUST00000179802.2	7734	4	40747	6584	40747	-6584	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATATGTCACAAGACAGGA	NA	False	NA	NA	False	AATAAA	-18	NA	105081692	105081406	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_105081400_105081700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126206	chr8	-	1816	20	FSM	ENSMUSG00000031878.19	ENSMUST00000034349.10	1808	20	-4	-4	-4	4	multi-exon	FALSE	canonical	3	645	junction_15	52.7352662859429	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGTTGTCTGGAATGGT	3329	False	NA	NA	False	AATAAA	-23	NA	105261273	105237655	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254009_105254082_105254818_105254850_105256687_105256749_105257024_105257129_105261143
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126212	chr8	-	1736	19	FSM	ENSMUSG00000031878.19	ENSMUST00000162466.8	1735	19	-1	0	0	0	multi-exon	FALSE	canonical	3	78	junction_15	163.229558869982	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTGTTGTCTGGAA	3333	False	NA	NA	False	AATAAA	-19	NA	105261269	105237659	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254818_105254850_105256687_105256749_105257024_105257129_105261143
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126291	chr8	+	942	5	FSM	ENSMUSG00000014856.13	ENSMUST00000126705.9	895	5	-38	-9	-4	4	multi-exon	FALSE	canonical	3	392	junction_2	13.1909059582729	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTGGGTGATGATGCACG	247	False	NA	22	True	AATAAA	-24	NA	106052981	106055693	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055325_106055403
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126299	chr8	+	797	6	NNC	ENSMUSG00000014856.13	novel	785	6	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	canonical	3	11	junction_4	158.439893966135	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCGTGTGGGTGATGATG	257	False	NA	18	True	AATAAA	-20	NA	106052991	106055689	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055091_106055221_106055325_106055403
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126321	chr8	-	1728	8	FSM	ENSMUSG00000013160.8	ENSMUST00000013304.8	1629	8	-88	-11	-88	11	multi-exon	FALSE	canonical	3	556	junction_1	38.5115938016444	289	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCTCCCTCCTTTGTGT	NA	False	NA	1	True	AATAAA	-29	NA	106292767	106251085	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_106251697_106251788_106251867_106251954_106252132_106252255_106252334_106255805_106255886_106257446_106257626_106265952_106266125_106292414
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126346	chr8	-	1421	11	NNC	ENSMUSG00000038000.11	novel	3154	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	63.8846616959032	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGAGAGATTCAGGGG	NA	False	NA	-12	True	AATAAA	-17	NA	106427717	106424788	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426206_106426363_106426492_106426528_106426635_106426681_106426913_106426991_106427078_106427173_106427334_106427472_106427551
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126358	chr8	+	1247	3	NIC	ENSMUSG00000005699.17	novel	1234	3	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	16.5	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGTCCTTCTGTGTCC	NA	False	NA	12	True	ATTAAA	-18	NA	106427778	106430126	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_+_106427919_106428805_106429029_106429242
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126405	chr8	+	184	1	Intergenic	novelGene_437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAAGTCAACTGT	NA	False	NA	NA	False	NA	NA	NA	106530966	106531150	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_+_106531000_106531200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126426	chr8	+	1308	1	Genic_Genomic	ENSMUSG00000008450.9	novel	NA	NA	NA	NA	18112	1072	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGTCTCTTTATTCCTA	1470	False	NA	28	True	AATAAA	-15	NA	106605726	106607034	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_+_106605700_106607000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126486	chr8	+	298	1	Genic_Genomic	ENSMUSG00000031901.13	novel	NA	NA	NA	NA	4836	1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCTGACATAATTTTTCT	NA	False	NA	34	True	AATAAA	-34	NA	106780175	106780473	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_+_106780200_106780500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126488	chr8	+	1453	1	ISM	ENSMUSG00000031902.11	ENSMUST00000109308.3	5984	10	69452	0	30320	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAAATCTGAGTTTTT	NA	False	NA	9	True	AATAAA	-20	NA	106855716	106857169	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_106855700_106857200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126498	chr8	+	606	1	ISM	ENSMUSG00000031903.8	ENSMUST00000034377.8	2706	6	13711	0	5607	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTTGTCCTGCTCTGA	NA	False	NA	14	True	AATAAA	-20	NA	106890741	106891347	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_106890700_106891300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126503	chr8	+	1199	1	ISM	ENSMUSG00000031904.6	ENSMUST00000034378.5	3750	10	27968	683	18474	178	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCTGGAATGTTCTACA	5826	False	NA	13	True	AATAAA	-28	NA	106923456	106924655	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_106923500_106924700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126506	chr8	-	1622	4	ISM	ENSMUSG00000033106.7	ENSMUST00000035925.7	1246	5	-3	-286	-1	286	intron_retention	FALSE	canonical	3	127	junction_1	3.29983164553722	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTTTTTAGATCTGATT	NA	False	NA	5	True	AATAAA	-29	NA	106937568	106927062	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_106927782_106928862_106928984_106930962_106931173_106936996
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126523	chr8	+	2307	18	FSM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	65	1100	-22	-1100	multi-exon	FALSE	canonical	3	978	junction_13	68.9507622326015	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTGGCTCAATGGGG	1884	False	NA	26	True	AATAAA	-27	NA	106937632	106978326	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126527	chr8	+	1105	6	FSM	ENSMUSG00000060098.12	ENSMUST00000109297.8	1094	6	0	-11	0	11	multi-exon	FALSE	canonical	3	1054	junction_4	40.5186376868719	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGCGGATGAGGGTG	1906	False	NA	NA	False	NA	NA	NA	106937654	106962032	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126533	chr8	+	374	3	NNC	ENSMUSG00000060098.12	novel	1094	6	NA	NA	2	-13310	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	573.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGCATGACCCACATTCC	1908	False	NA	NA	False	NA	NA	NA	106937656	106940591	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_106937715_106939007_106939204_106940471
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126559	chr8	+	1182	1	Genic_Genomic	ENSMUSG00000000303.13	novel	NA	NA	NA	NA	64923	1	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCTCACTTGATTTGA	NA	False	NA	27	True	ATTAAA	-19	NA	107395697	107396879	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_+_107395700_107396900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126566	chr8	+	2279	17	FSM	ENSMUSG00000041438.9	ENSMUST00000047629.7	2232	17	-39	-8	-24	8	multi-exon	TRUE	canonical	3	1046	junction_1	100.936996902771	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTAAATTATTTTCTAA	NA	False	NA	20	True	AATAAA	-25	NA	107620243	107649728	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_107620345_107621222_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126584	chr8	-	1822	2	Genic_Genomic	ENSMUSG00000074108.2	novel	645	1	NA	NA	-157002	75	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTGGCAGCCAGAGGCC	NA	False	NA	NA	False	AATAAA	-27	NA	107812047	107654325	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_-_107655094_107810993
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126586	chr8	-	1814	2	Genic_Genomic	ENSMUSG00000074108.2	novel	645	1	NA	NA	-157002	75	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTGGCAGCCAGAGGCC	NA	False	NA	NA	False	AATAAA	-27	NA	107812047	107654325	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_-_107655105_107811012
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126592	chr8	+	1791	2	Antisense	novelGene_ENSMUSG00000083734.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTAGGTTTTATCATC	NA	False	NA	NA	False	NA	NA	NA	107654325	107812047	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr8_+_107655152_107811082
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126619	chr8	+	1146	5	NNC	ENSMUSG00000031917.13	novel	3036	5	NA	NA	0	378	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	322.890364520219	98	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTGAGTGTTTTGTTG	NA	False	NA	35	True	AATAAA	-29	NA	107783508	107785676	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_107783620_107783724_107783812_107783904_107784044_107784678_107784820_107785008
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126621	chr8	+	1242	4	NIC	ENSMUSG00000031917.13	novel	3036	5	NA	NA	0	378	intron_retention	FALSE	canonical	3	714	junction_3	58.9594964549581	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTGAGTGTTTTGTTG	NA	False	NA	35	True	AATAAA	-29	NA	107783508	107785676	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_+_107783623_107783724_107784044_107784678_107784820_107785008
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126622	chr8	+	1154	5	NNC	ENSMUSG00000031917.13	novel	3036	5	NA	NA	0	378	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	346.440831889083	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTGAGTGTTTTGTTG	NA	False	NA	35	True	AATAAA	-29	NA	107783508	107785676	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_107783623_107783724_107783817_107783904_107784044_107784678_107784820_107785008
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126638	chr8	+	671	1	NIC	ENSMUSG00000031917.13	novel	3036	5	NA	NA	1468	378	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTGAGTGTTTTGTTG	NA	False	NA	35	True	AATAAA	-29	NA	107785005	107785676	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_+_107785000_107785700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126658	chr8	+	922	4	NNC	ENSMUSG00000031924.5	novel	4316	5	NA	NA	2	-1889	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	681.425140585686	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTTGTCATTCATCA	NA	False	NA	38	True	AGTAAA	-20	NA	107877273	107910733	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_107877506_107896442_107896572_107897022_107897060_107910209
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126689	chr8	-	584	2	Genic_Genomic	ENSMUSG00000057657.5	novel	456	1	NA	NA	-20584	59	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCTAAAGAACATTGTAC	NA	False	NA	-10	True	AATAAA	-31	NA	108010464	107989365	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_-_107989935_108010449
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126716	chr8	+	516	2	Antisense	novelGene_ENSMUSG00000059775.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTTTCATCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	108157915	108166218	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr8_+_108157955_108165741
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126718	chr8	-	546	2	Genic_Genomic	ENSMUSG00000059775.6	novel	449	1	NA	NA	-6	7847	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAATCTGTCTCTAATG	NA	False	NA	NA	False	NA	NA	NA	108166217	108157915	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_-_108157973_108165728
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126721	chr8	-	474	2	Genic_Genomic	ENSMUSG00000059775.6	novel	449	1	NA	NA	-6	7836	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGCTGAACTCTCAAATC	NA	False	NA	NA	False	NA	NA	NA	108166217	108157926	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_-_108157973_108165789
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126743	chr8	-	1569	7	NNC	ENSMUSG00000039067.6	novel	1581	7	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	950.475845739035	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCCTAGTGGTTT	NA	False	NA	-5	True	ATTAAA	-15	NA	108315079	108307011	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_108307952_108309013_108309106_108310804_108310886_108311490_108311593_108312336_108312430_108313256_108313349_108314910
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126761	chr8	+	684	2	Intergenic	novelGene_438	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGAAGTGCCTTTTATGGT	NA	False	NA	NA	False	AATAAA	-34	NA	108323733	108325883	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_+_108323854_108325319
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126764	chr8	-	808	3	Intergenic	novelGene_439	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCCTTGGTCGTGGTGTC	NA	False	NA	NA	False	NA	NA	NA	108408878	108404227	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_-_108404803_108404901_108405046_108408789
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126768	chr8	-	1564	2	Intergenic	novelGene_440	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGGAATCTTCACAGGC	NA	False	NA	NA	False	NA	NA	NA	108408874	108405376	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_-_108406856_108408789
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126780	chr8	-	375	1	ISM	ENSMUSG00000037993.9	ENSMUST00000042601.9	4463	27	17476	0	3739	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGCATTTTAAATCTCC	NA	False	NA	-2	True	AATAAA	-19	NA	110275017	110274642	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_110274600_110275000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126830	chr8	-	411	1	Genic_Genomic	ENSMUSG00000003657.10	novel	NA	NA	NA	NA	25264	6	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTTTCTTGTCGTGGGCC	NA	False	NA	-6	True	AATAAA	-28	NA	110869574	110869163	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_-_110869200_110869600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126866	chr8	+	489	1	Genic_Genomic	ENSMUSG00000010936.12	novel	NA	NA	NA	NA	74334	4	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCCTGCTCCTTCTCTG	NA	False	NA	20	True	AATAAA	-24	NA	111446545	111447034	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_+_111446500_111447000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126871	chr8	-	802	1	NIC	ENSMUSG00000031750.16	novel	675	2	NA	NA	68	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGATGGTGAACCTGGA	NA	False	NA	-12	True	ATTAAA	-27	NA	111469262	111468460	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_-_111468500_111469300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126877	chr8	-	1268	6	ISM	ENSMUSG00000031750.16	ENSMUST00000076846.11	1709	7	50524	0	-12681	0	3prime_fragment	TRUE	canonical	3	39	junction_4	2.0591260281974	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTGCATCTCTGATG	NA	False	NA	-23	True	ATTAAA	-16	NA	111482011	111468471	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_111469081_111469275_111469412_111474874_111475037_111475294_111475373_111476056_111476191_111481862
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126888	chr8	+	2751	19	FSM	ENSMUSG00000031753.17	ENSMUST00000034203.17	2737	19	-11	-3	-1	3	multi-exon	TRUE	canonical	3	332	junction_8	32.668367302671	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTTGGGTCCAGGAA	9617	False	NA	16	True	AATAAA	-21	NA	111573654	111608862	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126931	chr8	+	383	1	ISM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	21285	2095	7275	-2095	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	16	True	AATAAA	-18	NA	111781818	111782201	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_111781800_111782200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126943	chr8	+	174	1	Intergenic	novelGene_441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGGTTGTTTTTGACA	NA	False	NA	NA	False	NA	NA	NA	111975255	111975429	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_+_111975300_111975400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126971	chr8	-	1373	8	NNC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	-42	20	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	856.027846199753	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGCCGTGCTCCTTCCCT	NA	False	NA	-3	True	AATAAA	-35	NA	112580965	112495102	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_112495420_112498511_112498645_112505882_112506042_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000126978	chr8	-	319	1	Genic_Genomic	ENSMUSG00000031954.7	novel	NA	NA	NA	NA	85502	20	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGCCGTGCTCCTTCCCT	NA	False	NA	-3	True	AATAAA	-35	NA	112495421	112495102	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_-_112495100_112495400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127005	chr8	+	974	4	NNC	ENSMUSG00000031950.8	novel	1677	4	NA	NA	10	173	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1291.41326546626	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGGTGTGACCATGTCCG	NA	False	NA	NA	False	AATAAA	-18	NA	112667344	112679547	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_112667485_112667791_112667852_112669133_112669307_112678946
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127011	chr8	+	970	4	NNC	ENSMUSG00000031950.8	novel	1677	4	NA	NA	16	173	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1291.41326546626	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGGTGTGACCATGTCCG	NA	False	NA	NA	False	AATAAA	-18	NA	112667350	112679547	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_112667485_112667791_112667854_112669133_112669307_112678946
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127038	chr8	-	1959	14	NNC	ENSMUSG00000031948.15	novel	2008	14	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	424.595623843419	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCAGTGTTACTTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	112737910	112720074	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_112720335_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112737841
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127080	chr8	+	312	1	Genic_Genomic	ENSMUSG00000004637.16	novel	NA	NA	NA	NA	5305	8	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTTTTGGGAATTATTG	NA	False	NA	14	True	AATAAA	-14	NA	115180254	115180566	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_+_115180300_115180600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127083	chr8	+	1076	1	Genic_Genomic	ENSMUSG00000004637.16	novel	NA	NA	NA	NA	639469	4	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCTGAAGTGTATATCG	NA	False	NA	16	True	AATAAA	-19	NA	116078375	116079451	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_+_116078400_116079500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127107	chr8	-	581	3	FSM	ENSMUSG00000014633.16	ENSMUST00000128304.2	394	3	-73	-114	1	0	multi-exon	FALSE	canonical	0	0	junction_1	172.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTCCCTTTCTTTAAC	NA	False	NA	-5	True	AATAAA	-15	NA	117648177	117616256	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_117616599_117637822_117637974_117648089
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127132	chr8	+	1773	12	NNC	ENSMUSG00000031756.6	novel	1768	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	89.651944063585	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCAGTTCCTTTGGATGA	NA	False	NA	9	True	AATAAA	-17	NA	117648478	117668243	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_117648523_117649066_117649185_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127138	chr8	+	495	1	ISM	ENSMUSG00000047388.11	ENSMUST00000109099.4	4877	4	16558	0	16558	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTGTGTGAATCTTGT	NA	False	NA	24	True	ATTAAA	-18	NA	117686689	117687184	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_117686700_117687200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127179	chr8	+	193	1	Intergenic	novelGene_442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACCACCAACAACAAATTGT	NA	False	NA	NA	False	NA	NA	NA	118191599	118191792	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_+_118191600_118191800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127190	chr8	-	1147	5	FSM	ENSMUSG00000031843.3	ENSMUST00000034303.3	1068	5	-65	-14	-65	14	multi-exon	FALSE	canonical	3	669	junction_1	47.4572175754121	2320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTCTTCCTCAGTAGT	NA	False	NA	2	True	AATAAA	-36	NA	118528747	118518369	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_118519058_118519417_118519516_118521319_118521411_118525782_118525896_118528590
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127197	chr8	-	1068	5	NNC	ENSMUSG00000031843.3	novel	1068	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_2	297.108566015859	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAAGTAATTTTAGTCT	NA	False	NA	-9	True	AATAAA	-25	NA	118528682	118518380	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_118519058_118519417_118519513_118521319_118521411_118525782_118525896_118528590
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127198	chr8	-	1077	5	NNC	ENSMUSG00000031843.3	novel	1068	5	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	313.360814397716	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAAGTAATTTTAGTCT	NA	False	NA	-9	True	AATAAA	-25	NA	118528684	118518380	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_118519058_118519417_118519516_118521319_118521411_118525778_118525896_118528590
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127211	chr8	-	679	1	FSM	ENSMUSG00000031843.3	ENSMUST00000213070.2	1573	1	897	-3	897	3	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAAGTAATTTTAGTCT	NA	False	NA	-9	True	AATAAA	-25	NA	118519059	118518380	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_118518400_118519100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127224	chr8	+	1142	3	NIC	ENSMUSG00000031839.8	novel	1208	4	NA	NA	-13	-82	intron_retention	FALSE	canonical	3	1709	junction_2	151	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTCAAACGTTTTAGTGA	NA	False	NA	27	True	ATTAAA	-30	NA	120071241	120075000	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_+_120071360_120071674_120072473_120074774
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127259	chr8	-	1657	4	FSM	ENSMUSG00000031827.14	ENSMUST00000034285.14	1596	4	-53	-8	-53	8	multi-exon	FALSE	canonical	3	203	junction_1	12.9185482500507	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGGTTGTCTGCTTCGTG	NA	False	NA	NA	False	AGTAAA	-22	NA	120567336	120535952	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_120537095_120549392_120549551_120566880_120566964_120567062
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127263	chr8	-	1145	1	Genic_Genomic	ENSMUSG00000031827.14	novel	NA	NA	NA	NA	12359	8	mono-exon	FALSE	NA	NA	NA	NA	NA	336	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGGTTGTCTGCTTCGTG	1559	False	NA	NA	False	AGTAAA	-22	NA	120537097	120535952	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_-_120536000_120537100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127282	chr8	-	202	1	Intergenic	novelGene_443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGATGTTCATTGAGAAC	NA	False	NA	0	True	NA	NA	NA	121047828	121047626	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_-_121047600_121047800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127307	chr8	-	251	1	Genic_Genomic	ENSMUSG00000043687.17_ENSMUSG00000097919.2	novel	NA	NA	NA	NA	25512	1	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCGGGTCCTGGTTTTTGG	NA	False	NA	0	True	AATAAA	-14	NA	121335590	121335339	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_-_121335300_121335600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127337	chr8	+	737	5	NNC	ENSMUSG00000031818.13	novel	745	5	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3648.23183199752	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	False	NA	28	True	AATAAA	-17	NA	121394972	121400946	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_121395095_121396047_121396122_121399463_121399632_121399959_121400096_121400709
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127350	chr8	+	699	5	NIC	ENSMUSG00000031818.13	novel	745	5	NA	NA	5	2	combination_of_known_junctions	FALSE	canonical	2	138	junction_2	3714.73783563524	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGGTTCATTCTTTG	NA	False	NA	30	True	AATAAA	-19	NA	121395004	121400948	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_+_121395095_121396047_121396122_121399467_121399632_121399959_121400092_121400709
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127371	chr8	+	822	6	FSM	ENSMUSG00000031818.13	ENSMUST00000181847.8	611	6	-49	-162	-21	0	multi-exon	FALSE	canonical	1	1	junction_2	4257.36254505063	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	False	NA	28	True	AATAAA	-17	NA	121395025	121400946	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_121395095_121396047_121396122_121397741_121397884_121399463_121399632_121399959_121400092_121400709
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127402	chr8	+	240	1	Genic_Genomic	ENSMUSG00000031818.13	novel	NA	NA	NA	NA	818	2	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGGTTCATTCTTTG	NA	False	NA	30	True	AATAAA	-19	NA	121400708	121400948	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_+_121400700_121400900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127408	chr8	+	1564	9	NNC	ENSMUSG00000041515.11	novel	2847	9	NA	NA	0	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	13.8721843990051	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATGGCTGGCCTTTCTGT	NA	False	NA	NA	False	ATTAAA	-32	NA	121463096	121482146	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_121463149_121466555_121466731_121470444_121470629_121472358_121472448_121473941_121474048_121475037_121475086_121480091_121480477_121481126_121481243_121481737
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127428	chr8	-	748	5	NIC	ENSMUSG00000031816.16	novel	358	4	NA	NA	8	3	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	27.9776696670756	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCGGCTTACAAAAATGT	NA	False	NA	NA	False	AATAAA	-33	NA	121835110	121830587	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_-_121830920_121831130_121831245_121832312_121832427_121833608_121833713_121835026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127451	chr8	-	1107	7	FSM	ENSMUSG00000031809.11	ENSMUST00000183280.2	959	7	-100	-48	-15	0	multi-exon	FALSE	canonical	2	4	junction_4	3.09569593683445	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGCCACTGACAAAAACG	NA	False	NA	NA	False	AATAAA	-22	NA	122268708	122257518	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_122257781_122258436_122258654_122260433_122260471_122262161_122262309_122266605_122266747_122267267_122267320_122268457
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127464	chr8	+	784	4	FSM	ENSMUSG00000031812.17	ENSMUST00000181948.2	766	4	-18	0	-11	0	multi-exon	FALSE	canonical	3	5	junction_2	1182.02096240107	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTGCCAATAAAAAGATCAA	9950	False	NA	-7	True	AATAAA	-19	NA	122317204	122323751	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_122317304_122320228_122320390_122322724_122322832_122323334
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127472	chr8	-	716	1	ISM	ENSMUSG00000061410.7	ENSMUST00000046386.5	7444	13	51797	1686	3410	-39	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGTTGAAAACTGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	122327843	122327127	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_122327100_122327800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127483	chr8	-	405	3	ISM	ENSMUSG00000040263.17	ENSMUST00000174717.8	1662	11	-62	24660	-2	96	5prime_fragment	FALSE	canonical	3	197	junction_2	10.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCTGTCACCCCCTCT	463	False	NA	NA	False	AGTAAA	-20	NA	122556281	122547945	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_122548098_122548520_122548613_122556120
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127501	chr8	+	2217	13	FSM	ENSMUSG00000025316.17	ENSMUST00000093078.13	2289	13	75	-3	-8	3	multi-exon	FALSE	canonical	3	61	junction_4	55.5245191084283	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCAGTGTTGTTGCAC	NA	False	NA	10	True	AATAAA	-18	NA	122677305	122752919	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127513	chr8	-	772	6	NNC	ENSMUSG00000006519.12	novel	744	6	NA	NA	-20	12	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	335.107982596655	159	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCATATGAGGCTGGGG	NA	False	NA	NA	False	AATAAA	-30	NA	123159689	123151502	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_123151823_123152924_123153007_123153674_123153759_123153967_123154043_123154393_123154464_123159548
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127536	chr8	-	760	6	NNC	ENSMUSG00000006519.12	novel	744	6	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	323.073613902467	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGACAAGAAATTCTCCATA	NA	False	NA	NA	False	AATAAA	-19	NA	123159680	123151513	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_123151827_123152924_123153007_123153674_123153759_123153967_123154043_123154393_123154464_123159544
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127557	chr8	+	1659	15	NNC	ENSMUSG00000049482.17	novel	3066	15	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	37.7632258220851	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACAGTACTTGTGGGAA	8928	False	NA	17	True	AATAAA	-19	NA	123202947	123208486	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207749_123207824_123207964_123208069_123208137_123208209_123208269_123208334
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127558	chr8	+	1608	15	FSM	ENSMUSG00000049482.17	ENSMUST00000151855.8	3999	15	0	2391	0	3	multi-exon	FALSE	canonical	3	8	junction_11	35.9174222974004	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACAGTACTTGTGGGAA	8928	False	NA	17	True	AATAAA	-19	NA	123202947	123208486	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207871_123207964_123208069_123208137_123208209_123208269_123208334
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127562	chr8	+	152	1	ISM	ENSMUSG00000049482.17	ENSMUST00000116412.8	3066	15	5453	1345	251	3	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACAGTACTTGTGGGAA	1795	False	NA	17	True	AATAAA	-19	NA	123208334	123208486	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_123208300_123208500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127602	chr8	-	396	1	Genic_Genomic	ENSMUSG00000006589.9	novel	NA	NA	NA	NA	460	1	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTCTCCTCAGTTTGTT	NA	False	NA	-4	True	AATAAA	-18	NA	123301768	123301372	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_-_123301400_123301800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127643	chr8	+	902	4	NIC	ENSMUSG00000015013.10	novel	1659	5	NA	NA	-7	-1069	intron_retention	FALSE	canonical	3	528	junction_1	87.3473271231327	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACGTTGTCCTGTGTCAG	5509	False	NA	26	True	ACTAAA	-18	NA	123338371	123342330	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_+_123338433_123339804_123339978_123340659_123341127_123342129
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127647	chr8	+	600	5	NNC	ENSMUSG00000015013.10	novel	1659	5	NA	NA	-6	-1069	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	282.535396012606	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACGTTGTCCTGTGTCAG	5510	False	NA	26	True	ACTAAA	-18	NA	123338372	123342330	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_123338433_123339804_123339978_123340659_123340746_123341046_123341127_123342129
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127671	chr8	+	238	1	ISM	ENSMUSG00000000738.19	ENSMUST00000125975.8	2408	17	34530	5	2997	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTCTCCATGTGTAT	NA	False	NA	15	True	AGTAAA	-15	NA	123824256	123824494	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_123824300_123824500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127746	chr8	+	1118	2	FSM	ENSMUSG00000110537.2	ENSMUST00000212490.2	1115	2	2	-5	2	5	multi-exon	FALSE	canonical	2	12	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGGTGTGTCTTTCCT	3330	False	NA	6	True	NA	NA	NA	123899585	123905509	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_123899783_123904588
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127758	chr8	-	267	1	ISM	ENSMUSG00000000743.10	ENSMUST00000000759.9	2140	7	8230	0	5239	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTCAGACTTTTTTTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	123931269	123931002	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_123931000_123931300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127770	chr8	-	528	2	Antisense	novelGene_ENSMUSG00000069862.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGCGGCGGCAGGGGAAAA	NA	False	NA	NA	False	NA	NA	NA	123984405	123933279	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr8_-_123933772_123984369
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127775	chr8	+	417	3	NIC	ENSMUSG00000048478.8	novel	486	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	4	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGATCCTTTCCTGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	123939570	123948784	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_+_123939610_123939826_123939977_123948556
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127782	chr8	+	1616	13	FSM	ENSMUSG00000033862.8	ENSMUST00000213005.2	1580	13	-28	-8	-4	8	multi-exon	FALSE	canonical	3	85	junction_1	49.2958754190788	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGCAATCCTTTAATGT	2121	False	NA	18	True	GATAAA	-19	NA	123951576	123958997	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_123951670_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127803	chr8	+	202	1	Intergenic	novelGene_444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGATGTAGCTCATACA	541	False	NA	NA	False	NA	NA	NA	124048152	124048354	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_+_124048200_124048400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127846	chr8	+	1115	1	ISM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	24899	0	1716	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGGGAGTTTTGCCT	NA	False	NA	16	True	TTTAAA	-20	NA	124229540	124230655	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_124229500_124230700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127852	chr8	+	786	1	ISM	ENSMUSG00000039960.6	ENSMUST00000045487.4	3371	3	9169	1	9169	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTCTTGCTTATTCTAC	NA	False	NA	7	True	AATAAA	-19	NA	124389836	124390622	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_124389800_124390600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127873	chr8	-	943	8	ISM	ENSMUSG00000039509.9	ENSMUST00000044795.8	5808	26	34701	2161	1071	-2161	3prime_fragment	FALSE	canonical	3	363	junction_7	38.0852963217876	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAAGTCTGTTTTGTCTG	NA	False	NA	-1	True	ATTAAA	-39	NA	124641303	124626022	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127906	chr8	+	263	1	ISM	ENSMUSG00000031979.18	ENSMUST00000034460.11	2825	18	30979	0	16537	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTTATGTATCCAG	NA	False	NA	29	True	AATAAA	-19	NA	125278484	125278747	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_125278500_125278700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127908	chr8	+	728	5	ISM	ENSMUSG00000031981.8	ENSMUST00000093033.6	2330	20	37556	0	227	0	3prime_fragment	FALSE	canonical	1	2	junction_3	0.707106781186548	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTACCATCTGTGTCTGTG	NA	False	NA	NA	False	TATAAA	-23	NA	125340405	125345470	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_+_125340629_125341286_125341366_125342891_125343009_125344171_125344231_125345220
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127915	chr8	-	390	1	Genic_Genomic	ENSMUSG00000037300.20	novel	NA	NA	NA	NA	2504	5	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	-3	True	ATTAAA	-21	NA	125398455	125398065	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_-_125398100_125398500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127924	chr8	-	1680	5	NNC	ENSMUSG00000037300.20	novel	2409	4	NA	NA	0	10	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_1	180.045133230532	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATTTAATTCCTAAATCT	NA	False	NA	NA	False	AATAAA	-25	NA	125448711	125434709	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_125435912_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127927	chr8	-	544	1	Genic_Genomic	ENSMUSG00000037300.20	novel	NA	NA	NA	NA	1427	3	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAAAGTCATTTAATTCC	NA	False	NA	NA	False	AATAAA	-18	NA	125435260	125434716	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_-_125434700_125435300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127949	chr8	-	1371	7	NNC	ENSMUSG00000031984.9	novel	2340	7	NA	NA	0	-867	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	616.487811900789	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGACTGTTAAGTAGCA	NA	False	NA	-8	True	AATACA	-16	NA	125589753	125566093	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_125566706_125567182_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684_125588011_125589623
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127963	chr8	-	615	1	NIC	ENSMUSG00000031984.9	novel	2340	7	NA	NA	22996	-867	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGACTGTTAAGTAGCA	3104	False	NA	-8	True	AATACA	-16	NA	125566708	125566093	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_-_125566100_125566700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127972	chr8	+	787	1	NIC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	1642	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAATGGTCTTATTAAC	NA	False	NA	34	True	AATAAA	-25	NA	125616009	125616796	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr8_+_125616000_125616800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127977	chr8	-	403	1	Genic_Genomic	ENSMUSG00000031987.7	novel	NA	NA	NA	NA	40339	4	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGTCACCTCCAGCTGT	NA	False	NA	-13	True	ATTAAA	-34	NA	125635724	125635321	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_-_125635300_125635700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000127979	chr8	-	553	1	ISM	ENSMUSG00000031987.7	ENSMUST00000034469.7	3594	5	38563	1622	38563	-1622	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTTGCCAGTGAGTGA	NA	False	NA	-8	True	ATTAAA	-25	NA	125637500	125636947	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_125636900_125637500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128008	chr8	+	1135	5	NNC	ENSMUSG00000031851.15	novel	1155	5	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	25.0499500997507	53	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGAGTCCTTGTGTGGG	NA	False	NA	23	True	AATAAA	-31	NA	126460956	126474974	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_+_126461089_126462806_126462965_126464061_126464159_126471974_126472185_126474436
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128051	chr8	+	112	1	Intergenic	novelGene_445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTGCAGATAGCTCTAG	252	False	NA	NA	False	AATAAA	-40	NA	127093824	127093936	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_+_127093800_127093900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128061	chr8	+	184	1	Intergenic	novelGene_446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGCTCATGGTATGAGAA	NA	False	NA	8	True	NA	NA	NA	127303149	127303333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_+_127303100_127303300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128067	chr8	-	494	1	ISM	ENSMUSG00000051495.9	ENSMUST00000054960.9	5080	2	2837	2360	2837	-2360	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCTTACTGTCTGTCA	NA	False	NA	0	True	AATACA	-20	NA	127317888	127317394	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr8_-_127317400_127317900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128071	chr8	-	1374	1	Genic_Genomic	ENSMUSG00000093904.3	novel	NA	NA	NA	NA	13803	3	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTTCTATTTCATAG	NA	False	NA	0	True	NA	NA	NA	127658787	127657413	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr8_-_127657400_127658800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128072	chr8	-	1492	5	FSM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	-53	3463	-49	856	multi-exon	FALSE	canonical	3	5050	junction_1	881.47603484156	5344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTACTGATGTGAAGTG	NA	False	NA	-9	True	ATTAAA	-30	NA	127672643	127660879	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128077	chr8	-	1033	5	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	-1	441	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2905.22645416842	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCGGTGTGTTGTCTGTT	NA	False	NA	NA	False	ATTAAA	-37	NA	127672595	127661294	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672349
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128098	chr8	-	1557	11	NNC	ENSMUSG00000033931.10	novel	3424	11	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	52.7940337538249	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTCAAATGGTCACTGTG	NA	False	NA	-6	True	AATAAA	-26	NA	127697799	127675770	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr8_-_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131_127692373_127696728_127696879_127697487_127697660_127697739
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128115	chr8	-	459	2	Intergenic	novelGene_447	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	282	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTAGCTCCGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	129480222	129473043	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr8_-_129473263_129479982
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128128	chr8	+	933	1	FSM	ENSMUSG00000094530.3	ENSMUST00000180210.3	597	1	-75	-261	-75	261	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	129979403	129980336	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr8_+_129979400_129980300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128163	chr9	-	1371	4	NIC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	-36	-992	combination_of_known_splicesites	FALSE	canonical	3	71	junction_3	376.029549666276	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCGTCTTAGGGTTTC	6	False	NA	43	True	AGTAAA	-22	NA	4309507	4295956	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_4296840_4299297_4299370_4302469_4302632_4309253
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128179	chr9	-	1018	6	NNC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	0	-1615	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_4	309.593669185919	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTTTTAAAGACACAAATT	-1	True	NA	NA	False	AATAAA	-34	NA	4309469	4296579	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308733_4308920_4309253
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128213	chr9	-	1112	1	Genic_Genomic	ENSMUSG00000047193.17	novel	NA	NA	NA	NA	-43	-33903	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGTGCTGAGTTCTTTG	-10	True	NA	NA	False	AGTAAA	-14	NA	7184489	7183377	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr9_-_7183400_7184500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128256	chr9	+	1095	2	ISM	ENSMUSG00000079084.13	ENSMUST00000169961.3	2369	3	5077	1216	1327	1014	3prime_fragment	FALSE	canonical	3	37	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGGAATTCATTTCCCT	4713	False	NA	4	True	AATAAA	-16	NA	13251686	13253208	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_13252424_13252850
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128270	chr9	+	2100	1	ISM	ENSMUSG00000037808.14	ENSMUST00000059579.12	3702	10	16715	11	7554	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCTGTAATGAATGACT	4307	False	NA	NA	False	AATAAA	-24	NA	13755726	13757826	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_13755700_13757800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128274	chr9	+	1233	7	FSM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	-72	-50	-72	50	multi-exon	FALSE	canonical	3	777	junction_1	58.5484130157826	4136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTGTGCTGTGGGTTT	NA	False	NA	53	True	TATAAA	-34	NA	14411840	14421923	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128306	chr9	+	177	1	NIC	ENSMUSG00000004096.10	novel	1111	7	NA	NA	2391	9	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGACTTTTTTTTTTGGTT	NA	False	NA	22	True	ATTAAA	-22	NA	14421493	14421670	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_14421500_14421700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128309	chr9	-	343	1	ISM	ENSMUSG00000031931.5	ENSMUST00000216372.2	2679	3	4732	164	2840	5	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTTTGTCTCTGTTTC	NA	False	NA	NA	False	NA	NA	NA	14691420	14691077	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_14691100_14691400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128314	chr9	-	2241	3	FSM	ENSMUSG00000031931.5	ENSMUST00000216037.2	1037	3	0	-1204	0	2	multi-exon	FALSE	canonical	3	83	junction_2	53	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCAGTGTTTGTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	14695822	14691080	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_14692908_14693910_14694259_14695756
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128328	chr9	-	215	1	ISM	ENSMUSG00000031934.15	ENSMUST00000164273.9	5732	5	39479	3657	4509	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACCCTCTGTGCCCTTA	NA	False	NA	-4	True	AATAAA	-21	NA	14917295	14917080	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_14917100_14917300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128352	chr9	+	1379	6	FSM	ENSMUSG00000031939.17	ENSMUST00000164079.9	1005	6	-58	-316	-8	10	multi-exon	FALSE	canonical	3	288	junction_1	106.167791726116	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTTAGCCCAAATTATTT	9064	False	NA	15	True	AATAAA	-26	NA	15217501	15223410	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128381	chr9	+	1161	11	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_6	180.117989107141	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATAGTTTGTATGTA	9118	False	NA	7	True	NA	NA	NA	15217555	15228274	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15225285_15225329_15225526_15225561_15226397_15226428_15226678_15226737_15228184
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128401	chr9	+	352	1	ISM	ENSMUSG00000058173.13	ENSMUST00000045620.10	954	3	39422	0	24050	0	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTTCTCTTGTTTG	NA	False	NA	11	True	AATAAA	-19	NA	15456204	15456556	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_15456200_15456600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128407	chr9	-	228	3	Antisense	novelGene_ENSMUSG00000111534.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	3	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCATGTGTCCTTGTGGTA	NA	False	NA	NA	False	NA	NA	NA	17467618	17433558	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr9_-_17433599_17438342_17438424_17467511
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128441	chr9	-	320	1	ISM	ENSMUSG00000060510.15	ENSMUST00000174462.8	6283	9	26030	0	25879	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTAATGTTGTTTCTT	NA	False	NA	NA	False	AATAAA	-1	NA	20406683	20406363	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_20406400_20406700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128451	chr9	-	690	1	FSM	ENSMUSG00000111547.2	ENSMUST00000217520.2	1484	1	0	794	0	-794	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAATGTGTAGATTACTT	2676	False	NA	NA	False	GATAAA	-35	NA	20518912	20518222	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_20518200_20518900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128454	chr9	-	512	1	FSM	ENSMUSG00000066892.15	ENSMUST00000140702.3	1555	1	1043	0	1043	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTGCACTTATTTAAC	NA	False	NA	-1	True	ATTAAA	-21	NA	20549593	20549081	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_20549100_20549600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128461	chr9	-	2077	3	FSM	ENSMUSG00000066892.15	ENSMUST00000086458.10	2056	3	-18	-3	-18	0	multi-exon	FALSE	canonical	3	47	junction_2	23	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTGCACTTATTTAAC	NA	False	NA	-1	True	ATTAAA	-21	NA	20556081	20549081	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_20550495_20553319_20553393_20555490
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128497	chr9	+	459	4	NNC	ENSMUSG00000084786.10	novel	2114	5	NA	NA	-18	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	532.355770764877	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAGAGTTGTGTGT	NA	False	NA	33	True	AATAAA	-30	NA	20556098	20558088	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_20556190_20556488_20556556_20556701_20556826_20557911
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128503	chr9	+	449	4	NNC	ENSMUSG00000084786.10	novel	2114	5	NA	NA	-18	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	532.355770764877	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAGAGTTGTGTGT	NA	False	NA	33	True	AATAAA	-30	NA	20556098	20558088	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_20556190_20556488_20556556_20556701_20556794_20557889
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128504	chr9	+	333	3	NIC	ENSMUSG00000084786.10	novel	2114	5	NA	NA	-18	13	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	522	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTGAGAGTTGTGT	NA	False	NA	31	True	AATAAA	-28	NA	20556098	20558086	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_20556190_20556488_20556556_20557911
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128517	chr9	+	540	5	FSM	ENSMUSG00000084786.10	ENSMUST00000162303.8	505	5	-18	-17	-18	15	multi-exon	FALSE	canonical	3	29	junction_1	467.366558495577	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAGAGTTGTGTGT	NA	False	NA	33	True	AATAAA	-30	NA	20556098	20558088	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_20556273_20556488_20556556_20556701_20556786_20556917_20556956_20557911
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128538	chr9	+	175	1	ISM	ENSMUSG00000084786.10	ENSMUST00000129414.9	2114	5	3298	174	1398	13	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTGAGAGTTGTGT	NA	False	NA	31	True	AATAAA	-28	NA	20557911	20558086	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_20557900_20558100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128560	chr9	+	916	4	NNC	ENSMUSG00000032171.8	novel	3843	4	NA	NA	23	-2893	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1255.46830571969	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGGTCCTGTATCATT	NA	False	NA	24	True	ATTAAA	-14	NA	20563413	20574987	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_20563494_20566657_20566877_20573593_20573705_20574481
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128584	chr9	-	1241	5	ISM	ENSMUSG00000038742.8	ENSMUST00000043726.8	1582	6	1345	-5	1345	5	3prime_fragment	FALSE	canonical	3	59	junction_4	28.1646942110153	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTTCCTGTGTGCA	NA	False	NA	0	True	NA	NA	NA	20789678	20785098	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_20785369_20786461_20786733_20786809_20786998_20787687_20787866_20789344
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128605	chr9	+	1585	11	NNC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	264.391452206761	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20799559	20803474	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_20799614_20799702_20799878_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20802662_20802746_20803044_20803127
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128637	chr9	-	831	8	NNC	ENSMUSG00000070319.7	novel	1101	11	NA	NA	659	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	934.162639337869	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCCTGCTTATTTTCT	5839	False	NA	-1	True	AGTAAA	-16	NA	20809219	20805644	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807299_20807402_20807517_20809002_20809063_20809183
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128638	chr9	-	1106	11	NNC	ENSMUSG00000070319.7	novel	1101	11	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	798.250844033378	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCCTGCTTATTTTCT	5136	False	NA	-1	True	AGTAAA	-16	NA	20809922	20805644	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807121_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809379_20809464_20809673_20809721_20809839
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128640	chr9	-	831	8	NNC	ENSMUSG00000070319.7	novel	1101	11	NA	NA	657	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	934.267015977155	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCCTGCTTATTTTCT	5837	False	NA	-1	True	AGTAAA	-16	NA	20809221	20805644	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807517_20809002_20809055_20809183
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128667	chr9	-	98	1	NIC	ENSMUSG00000070319.7	novel	1101	11	NA	NA	2328	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCCTGCTTATTTTCT	9316	False	NA	-1	True	AGTAAA	-16	NA	20805742	20805644	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_20805600_20805700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128673	chr9	-	309	5	ISM	ENSMUSG00000004099.17	ENSMUST00000215545.2	607	9	16222	-22	566	22	3prime_fragment	FALSE	canonical	3	859	junction_3	27.2075357208256	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGAGACGAGGATGAGAG	NA	False	NA	NA	False	NA	NA	NA	20847919	20840364	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128692	chr9	+	1129	9	NNC	ENSMUSG00000003299.11	novel	1288	9	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	336.318301613219	124	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGGTCACTGCTGTGG	NA	False	NA	26	True	AATAAA	-26	NA	20914189	20920135	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918732_20918837_20918926_20919037_20919118_20919196_20919789
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128694	chr9	+	1202	8	NIC	ENSMUSG00000003299.11	novel	1288	9	NA	NA	-17	0	intron_retention	FALSE	canonical	3	832	junction_5	84.7158515875517	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAAATGAGCTGGTCAC	NA	False	NA	18	True	AATAAA	-18	NA	20914193	20920127	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918729_20918837_20918926_20919196_20919789
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128712	chr9	+	1029	9	NIC	ENSMUSG00000003299.11	novel	1288	9	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	127	junction_5	294.9804813458	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAAATGAGCTGGTCAC	NA	False	NA	18	True	AATAAA	-18	NA	20914196	20920127	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918153_20918729_20918837_20918926_20919037_20919118_20919196_20919789
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128727	chr9	+	782	2	FSM	ENSMUSG00000037405.9	ENSMUST00000215003.2	2203	2	-4	1425	-4	-1425	multi-exon	FALSE	canonical	3	431	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTTTTTATTTTATGTG	NA	False	NA	NA	False	AAAAAG	-1	NA	20927276	20930875	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_20927398_20930214
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128732	chr9	+	973	3	ISM	ENSMUSG00000037405.9	ENSMUST00000086399.6	2535	7	0	2679	0	-2679	5prime_fragment	FALSE	canonical	3	431	junction_1	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTGTGTGGGGTGGACC	NA	False	NA	NA	False	AATAAA	-22	NA	20927280	20937434	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_20927398_20930214_20930476_20936839
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128739	chr9	+	975	1	ISM	ENSMUSG00000037405.9	ENSMUST00000086399.6	2535	7	11856	2	11856	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGTGAGTTTGTGTAC	NA	False	NA	14	True	AATAAA	-19	NA	20939136	20940111	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_20939100_20940100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128754	chr9	-	765	4	NIC	ENSMUSG00000079677.3	novel	812	5	NA	NA	0	8	combination_of_known_splicesites	FALSE	canonical	3	32	junction_3	142.14312036348	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGTGTCCTTGGTG	NA	False	NA	1	True	AATAAA	-20	NA	20984840	20978807	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_20979222_20979325_20979414_20984370_20984478_20984684
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128759	chr9	-	814	5	NNC	ENSMUSG00000079677.3	novel	812	5	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	121.701222261734	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATGTTTTGTGTCCTTGG	NA	False	NA	-1	True	AATAAA	-18	NA	20984840	20978809	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_20979218_20979325_20979414_20984370_20984478_20984559_20984615_20984684
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128776	chr9	-	944	3	FSM	ENSMUSG00000079677.3	ENSMUST00000216484.2	633	3	-1	-310	-1	1	multi-exon	FALSE	canonical	3	331	junction_1	2.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGACATGTTTTGTGTC	NA	False	NA	-6	True	AATAAA	-13	NA	20984819	20978814	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_20979222_20979325_20979414_20984370
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128788	chr9	-	606	1	ISM	ENSMUSG00000032175.12	ENSMUST00000213717.2	4444	20	26506	1	22672	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTGTTGCTTGCATT	NA	False	NA	-3	True	NA	NA	NA	21015970	21015364	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_21015400_21016000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128835	chr9	+	305	1	ISM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	8150	4025	5365	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTGGCGTTGTTGACA	372	False	NA	23	True	GATAAA	-15	NA	21184738	21185043	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_21184700_21185000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128841	chr9	-	568	3	ISM	ENSMUSG00000035047.10	ENSMUST00000184326.8	2490	18	6076	7107	6076	292	internal_fragment	FALSE	canonical	3	107	junction_1	9	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTACGATTACTTGTGAT	NA	False	NA	NA	False	NA	NA	NA	21193173	21192038	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_21192466_21192957_21193036_21193110
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128854	chr9	-	398	1	NIC	ENSMUSG00000003309.15	novel	2776	10	NA	NA	7132	3	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGTGTGCTTCTTGGGT	NA	False	NA	-1	True	ATTAAA	-15	NA	21207151	21206753	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_21206800_21207200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128861	chr9	+	544	1	ISM	ENSMUSG00000032178.15	ENSMUST00000115414.3	3606	18	33251	6	1619	3	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCCGTACTTGAGTCTT	NA	False	NA	26	True	AATACA	-15	NA	21312549	21313093	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_21312500_21313100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128865	chr9	+	1010	3	NNC	ENSMUSG00000032178.15	novel	2118	10	NA	NA	-452	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	673	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCAGGCCTGGGT	NA	False	NA	118	True	AATAAA	-16	NA	21314476	21316659	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_21314687_21315355_21315488_21315991
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128868	chr9	+	1121	3	ISM	ENSMUSG00000032178.15	ENSMUST00000215169.2	2118	10	5712	-3	-452	2	3prime_fragment	FALSE	canonical	3	965	junction_1	190.5	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCAGGCCTGGGT	NA	False	NA	118	True	AATAAA	-16	NA	21314476	21316659	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_21314798_21315355_21315488_21315991
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128871	chr9	+	567	1	Genic_Genomic	ENSMUSG00000032178.15	novel	NA	NA	NA	NA	1164	2	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCAGGCCTGGGT	NA	False	NA	118	True	AATAAA	-16	NA	21316092	21316659	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr9_+_21316100_21316700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128929	chr9	-	1468	3	FSM	ENSMUSG00000032180.12	ENSMUST00000213316.2	1454	3	-16	2	-16	0	multi-exon	FALSE	canonical	3	564	junction_2	0.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCCTGGTGACTGGGCT	NA	False	NA	-5	True	AATAAA	-19	NA	21421499	21418850	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_21419688_21420226_21420648_21421289
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128930	chr9	-	1222	3	FSM	ENSMUSG00000032180.12	ENSMUST00000214285.2	1213	3	-7	-2	-7	0	multi-exon	FALSE	canonical	2	30	junction_2	267.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCCTGGTGACTGGGCT	NA	False	NA	-5	True	AATAAA	-19	NA	21421490	21418850	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_21419688_21420226_21420411_21421289
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128934	chr9	-	1312	4	NNC	ENSMUSG00000032180.12	novel	1378	4	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	265.636761177531	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCCTGGTGACTGGGCT	NA	False	NA	-5	True	AATAAA	-19	NA	21421490	21418850	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_21419688_21420226_21420411_21420557_21420648_21421289
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128935	chr9	-	1289	4	NNC	ENSMUSG00000032180.12	novel	1378	4	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	264.222549294256	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCCTGGTGACTGGGCT	NA	False	NA	-5	True	AATAAA	-19	NA	21421490	21418850	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_21419688_21420226_21420411_21420580_21420648_21421289
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128965	chr9	+	1663	1	ISM	ENSMUSG00000048429.11	ENSMUST00000062125.11	3170	2	1568	18	1568	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTATTCACCCTCCAT	552	False	NA	16	True	ATTAAA	-25	NA	21505585	21507248	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_21505600_21507200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128970	chr9	+	671	3	ISM	ENSMUSG00000032187.17	ENSMUST00000174008.8	5405	34	84628	-2	65125	2	3prime_fragment	FALSE	canonical	3	777	junction_1	40.5	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTCCCTGGACTCCT	NA	False	NA	24	True	AATAAA	-21	NA	21612187	21614664	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_21612283_21612383_21612527_21614231
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128974	chr9	+	434	1	NIC	ENSMUSG00000032187.17	novel	6354	34	NA	NA	67167	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGCTCCCTGGACTCC	NA	False	NA	23	True	AATAAA	-20	NA	21614229	21614663	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_21614200_21614700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000128994	chr9	-	1024	1	NIC	ENSMUSG00000074476.7	novel	1366	5	NA	NA	703	9	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTATCTACTTGCTTT	NA	False	NA	-11	True	ATTAAA	-23	NA	21668412	21667388	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_21667400_21668400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129033	chr9	-	1877	15	FSM	ENSMUSG00000032198.10	ENSMUST00000213296.2	1868	15	-6	-3	-4	3	multi-exon	FALSE	canonical	3	13	junction_1	50.5494807094989	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGCCTCTGTTCTCTTTT	6269	False	NA	-3	True	NA	NA	NA	21763918	21748641	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_21748848_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129115	chr9	-	919	3	FSM	ENSMUSG00000013822.8	ENSMUST00000013966.8	888	3	-18	-13	-18	11	multi-exon	FALSE	canonical	3	357	junction_2	52.5	1082	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTTGGATATGAGGTAG	7926	False	NA	5	True	AATAAA	-28	NA	22028486	22024273	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_22024976_22025103_22025240_22028405
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129136	chr9	-	464	1	ISM	ENSMUSG00000001348.16	ENSMUST00000069330.14	1356	5	4625	0	3408	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTGTCATCAAGGTTA	7949	False	NA	-19	True	AATAAA	-21	NA	22038486	22038022	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_22038000_22038500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129137	chr9	-	1426	5	FSM	ENSMUSG00000001348.16	ENSMUST00000213815.2	1419	5	4	-11	4	0	multi-exon	FALSE	canonical	3	35	junction_4	92.7425873048623	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTGTCATCAAGGTTA	9078	False	NA	-19	True	AATAAA	-21	NA	22042945	22038022	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22042796
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129139	chr9	-	1432	5	FSM	ENSMUSG00000001348.16	ENSMUST00000069330.14	1356	5	-76	0	-60	0	multi-exon	FALSE	canonical	3	129	junction_4	52.4374627532645	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTGTCATCAAGGTTA	8836	False	NA	-19	True	AATAAA	-21	NA	22043187	22038022	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22043032
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129181	chr9	-	521	2	Genic_Genomic	ENSMUSG00000061167.10	novel	615	1	NA	NA	-37	67	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGTAACATATTTAGAT	NA	False	NA	NA	False	AATAAA	-33	NA	22097554	22096835	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr9_-_22097330_22097527
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129190	chr9	-	739	2	Genic_Genomic	ENSMUSG00000061167.10	novel	615	1	NA	NA	-3427	66	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTGTAACATATTTAGA	7291	False	NA	NA	False	AATAAA	-32	NA	22100944	22096836	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr9_-_22097557_22100925
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129228	chr9	-	1175	1	FSM	ENSMUSG00000094627.3	ENSMUST00000178676.3	273	1	-110	-792	-110	792	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGCTTGGAAAAAAAAAAAAC	7308	False	NA	NA	False	AATAAA	-15	NA	22232783	22231608	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_22231600_22232800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129246	chr9	-	797	4	ISM	ENSMUSG00000032239.11	ENSMUST00000034763.10	1134	6	10877	0	10699	0	3prime_fragment	FALSE	canonical	3	365	junction_2	10.2306728354819	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGTCATTATTAATACAG	7535	False	NA	-1	True	AATAAA	-23	NA	22368767	22359606	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_22360151_22361097_22361160_22365074_22365167_22368668
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129366	chr9	-	1020	1	NIC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	28147	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTTTGTATTTTTTTT	NA	False	NA	-1	True	ATTAAA	-14	NA	27009699	27008679	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_27008700_27009700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129367	chr9	+	300	1	Genic_Genomic	ENSMUSG00000034275.19	novel	NA	NA	NA	NA	2897	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCCATTTATCTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	27241132	27241432	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr9_+_27241100_27241400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129388	chr9	-	623	1	NIC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	12891	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAATTTGTTTTTCTTGCT	2878	False	NA	-5	True	AGTAAA	-19	NA	31001325	31000702	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_31000700_31001300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129393	chr9	-	1019	5	NNC	ENSMUSG00000031996.18	novel	3504	17	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	613.489201208954	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8714	False	NA	-9	True	AATAAA	-19	NA	31123112	31060852	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_31061309_31083271_31083343_31088313_31088438_31089200_31089375_31122918
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129407	chr9	+	1133	1	ISM	ENSMUSG00000042185.15	ENSMUST00000086167.12	5161	26	34009	0	10774	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGGCCTTTAATCATT	NA	False	NA	6	True	ATTAAA	-14	NA	31331496	31332629	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_31331500_31332600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129439	chr9	-	672	1	ISM	ENSMUSG00000032038.8	ENSMUST00000034537.8	2095	11	69626	0	8547	0	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTGGGGCTCTGTGT	NA	False	NA	-2	True	ATTAAA	-24	NA	34958543	34957871	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_34957900_34958500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129441	chr9	-	2074	11	FSM	ENSMUSG00000032038.8	ENSMUST00000034537.8	2095	11	21	0	21	0	multi-exon	FALSE	canonical	3	169	junction_1	8.15107354892593	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTGGGGCTCTGTGT	NA	False	NA	-2	True	ATTAAA	-24	NA	35028148	34957871	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_34958816_34959114_34959259_34963535_34963680_34964373_34964564_34964667_34964764_34965358_34965420_34965730_34965829_34965997_34966079_34966493_34966579_34966869_34966946_35027993
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129465	chr9	-	2224	11	FSM	ENSMUSG00000039048.16	ENSMUST00000127996.8	2289	11	69	-4	-6	2	multi-exon	TRUE	canonical	3	179	junction_9	18.9747200242849	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTGAGAGTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	35122282	35115499	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121240_35121462_35122102
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129474	chr9	+	1081	1	Genic_Genomic	ENSMUSG00000032042.12	novel	NA	NA	NA	NA	1036	1	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGGTTCATATTATTTT	NA	False	NA	4	True	AATAAA	-19	NA	35127230	35128311	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr9_+_35127200_35128300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129545	chr9	+	729	3	ISM	ENSMUSG00000074452.14	ENSMUST00000098906.9	1690	11	0	82400	0	-38539	5prime_fragment	FALSE	canonical	2	5	junction_2	5.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGGAGGAATCTATTATA	NA	False	NA	NA	False	AATAAA	-17	NA	35481579	35519214	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_35481827_35485525_35485684_35518890
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129546	chr9	+	944	5	NIC	ENSMUSG00000074452.14	novel	1690	11	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	4.49305018890286	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCCTCATATATTCTGC	NA	False	NA	NA	False	AATAAA	-21	NA	35481579	35557756	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_35481827_35485525_35485684_35518890_35519016_35523067_35523168_35557442
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129550	chr9	-	3219	13	FSM	ENSMUSG00000032113.17	ENSMUST00000034625.12	3397	13	21	157	21	-157	multi-exon	FALSE	canonical	3	297	junction_12	54.0685650098301	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAACAACTGTTTTTTG	669	False	NA	-5	True	TATAAA	-21	NA	36637933	36619934	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36637858
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129561	chr9	-	2381	13	NNC	ENSMUSG00000032113.17	novel	3397	13	NA	NA	-16	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	130.723520794419	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGGGTCCTGTATTCCT	705	False	NA	NA	False	ATTAAA	-13	NA	36637897	36620734	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635315_36637092_36637175_36637858
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129572	chr9	-	2758	18	FSM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	46	3063	0	19	multi-exon	FALSE	canonical	3	1637	junction_6	106.765013773661	323	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTTTCTGGGCAAGAA	NA	False	NA	0	True	NA	NA	NA	36678929	36643702	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129576	chr9	-	1236	1	Genic_Genomic	ENSMUSG00000062762.18	novel	NA	NA	NA	NA	2626	301	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTTAAATATTTGATTAT	1772	False	NA	NA	False	ATTAAA	-21	NA	36691389	36690153	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr9_-_36690200_36691400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129580	chr9	-	2121	11	NNC	ENSMUSG00000062762.18	novel	2220	11	NA	NA	27	4	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_10	160.762060200782	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATAATGTTTGATTTC	NA	False	NA	-4	True	ATTAAA	-21	NA	36708630	36690450	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708552
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129603	chr9	+	272	1	ISM	ENSMUSG00000032121.10	ENSMUST00000034632.10	2619	4	14684	1522	14684	-1522	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGGGCTTGCTCTTCAA	NA	False	NA	9	True	AATAAA	-15	NA	37134202	37134474	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_37134200_37134500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129613	chr9	+	192	1	Intergenic	novelGene_448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATTACTTAAAGAAATAAT	NA	False	NA	NA	False	NA	NA	NA	37360192	37360384	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr9_+_37360200_37360400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129627	chr9	-	692	5	FSM	ENSMUSG00000001948.11	ENSMUST00000002013.11	696	5	0	4	0	-4	multi-exon	TRUE	canonical	2	6	junction_2	1.92028643696715	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGTTGTGGTTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	37525018	37514589	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_37514783_37517088_37517167_37518912_37518984_37523131_37523315_37524851
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129628	chr9	-	438	3	NIC	ENSMUSG00000001948.11	novel	696	5	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGTTGTGGTTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	37525018	37514589	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_37514783_37517088_37517167_37524851
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129653	chr9	-	1413	9	NNC	ENSMUSG00000011114.19	novel	1984	9	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	canonical	2	41	junction_7	543.684981744944	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGGTTATTTGTTTCTT	NA	False	NA	-25	True	AATAAA	-13	NA	37568536	37560482	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_37560800_37561326_37561470_37562244_37562356_37562585_37562684_37563910_37564058_37564328_37564466_37565511_37565658_37566317_37566389_37568293
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129723	chr9	-	326	1	ISM	ENSMUSG00000087135.8	ENSMUST00000149386.8	819	4	3111	3	2391	3	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTGTGACTGCCGGT	NA	False	NA	NA	False	AATAAA	-26	NA	40692366	40692040	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_40692000_40692400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129738	chr9	+	2205	8	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	3928	junction_3	6242.18814002832	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2455	False	NA	10	True	AATAAA	-20	NA	40712567	40716496	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715992_40716227
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129748	chr9	+	2094	9	NNC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7912.77222280536	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2459	False	NA	10	True	AATAAA	-20	NA	40712571	40716496	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715043_40715239_40715460_40715660_40715758_40715992_40716227
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129751	chr9	+	2090	9	NNC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7912.77222280536	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2459	False	NA	10	True	AATAAA	-20	NA	40712571	40716496	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715047_40715239_40715460_40715660_40715758_40715992_40716227
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129753	chr9	+	1463	7	NNC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7466.11390997128	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2459	False	NA	10	True	AATAAA	-20	NA	40712571	40716496	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_40712645_40713213_40713253_40714378_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129754	chr9	+	2106	9	NNC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	7690.53829390375	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2459	False	NA	10	True	AATAAA	-20	NA	40712571	40716496	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715664_40715758_40715992_40716227
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129775	chr9	-	196	1	ISM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	155859	3523	6149	1496	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACGGAGTGCATTCTCCT	NA	False	NA	-35	True	AATAAA	-19	NA	41879734	41879538	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_41879500_41879700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129791	chr9	-	419	2	Intergenic	novelGene_449	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTTCAGATCCCCCAG	NA	False	NA	NA	False	AAAAAG	-1	NA	42600843	42600320	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr9_-_42600592_42600695
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129801	chr9	-	426	2	Intergenic	novelGene_450	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGTCAGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	42600843	42600330	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr9_-_42600592_42600678
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129809	chr9	-	551	5	NIC	ENSMUSG00000059495.15	novel	10752	41	NA	NA	196	4	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	5.11737237261468	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACCTTTGTTCTTGAGTA	NA	False	NA	NA	False	AATAAA	-17	NA	43016585	42937295	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_42937526_42938492_42938592_42953886_42953973_42955559_42955584_43016473
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129810	chr9	-	599	6	ISM	ENSMUSG00000059495.15	ENSMUST00000072767.7	10059	42	205	62157	205	4	5prime_fragment	FALSE	canonical	0	0	junction_3	9.91160935469109	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACCTTTGTTCTTGAGTA	NA	False	NA	NA	False	AATAAA	-17	NA	43016576	42937295	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_42937526_42938492_42938592_42951835_42951893_42953886_42953973_42955559_42955584_43016473
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129814	chr9	-	957	3	NIC	ENSMUSG00000048503.8	novel	3503	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	11.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCCTTCGTATCTTTGT	NA	False	NA	NA	False	AATAAA	-22	NA	43027839	43019944	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_43020634_43024755_43024956_43027771
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129834	chr9	+	1243	1	NIC	ENSMUSG00000032011.6	novel	1735	4	NA	NA	-585	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTGTCTGTCTCTTCT	NA	False	NA	34	True	AATAAA	-20	NA	43958633	43959876	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_43958600_43959900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129857	chr9	+	1397	1	FSM	ENSMUSG00000049932.4	ENSMUST00000052686.4	1384	1	-12	-1	-12	1	mono-exon	FALSE	NA	NA	NA	NA	NA	1226	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTAATGTTGAATGCTG	5241	False	NA	35	True	ATTAAA	-31	NA	44245978	44247375	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_44246000_44247400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129876	chr9	+	182	1	Intergenic	novelGene_451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACAGGAGAGGGGGGAAA	NA	False	NA	NA	False	NA	NA	NA	44288885	44289067	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr9_+_44288900_44289100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129914	chr9	-	849	5	NNC	ENSMUSG00000032112.11	novel	1220	5	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	375.447066841652	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTCTCTCCTAACTGA	1493	False	NA	-9	True	AATAAA	-16	NA	44318877	44315056	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_44315396_44315630_44315758_44316539_44316644_44318100_44318276_44318773
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000129986	chr9	-	345	1	ISM	ENSMUSG00000041523.4	ENSMUST00000047740.4	1083	5	1904	13	1904	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTATGTCTCATCTCCGA	NA	False	NA	NA	False	AATAAA	-12	NA	44364369	44364024	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_44364000_44364400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130002	chr9	+	1601	12	FSM	ENSMUSG00000002031.14	ENSMUST00000238800.2	1059	12	-226	-316	17	1	multi-exon	FALSE	canonical	3	173	junction_2	11.1058022211458	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGCTCATTAGTGTCC	NA	False	NA	11	True	AATACA	-20	NA	44684223	44702193	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_44684471_44684984_44685082_44689858_44689936_44693396_44693531_44695027_44695103_44695256_44695351_44695628_44695758_44697590_44697713_44698134_44698202_44700863_44700925_44701187_44701274_44701781
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130019	chr9	-	308	2	FSM	ENSMUSG00000038717.10	ENSMUST00000216380.2	295	2	-12	-1	-12	1	multi-exon	FALSE	canonical	3	10	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGTTTTCTCTGTCA	NA	False	NA	-28	True	AATAAA	-20	NA	44832017	44824566	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_44824765_44831907
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130048	chr9	+	1876	8	FSM	ENSMUSG00000066705.8	ENSMUST00000217381.2	1789	8	-87	0	-87	0	multi-exon	FALSE	canonical	3	728	junction_2	116.890320124361	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGAGTGGCTTTTCTTCT	281	False	NA	22	True	AATAAA	-26	NA	45281395	45307457	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_45281787_45301285_45301346_45301934_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130077	chr9	+	1492	8	NNC	ENSMUSG00000066705.8	novel	2362	2	NA	NA	5099	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	396.485787376845	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTCTGAGTGGCTTTTC	5724	False	NA	18	True	AATAAA	-22	NA	45286838	45307453	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_45286847_45301285_45301346_45301931_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130097	chr9	+	629	6	FSM	ENSMUSG00000059412.8	ENSMUST00000041005.6	632	6	5	-2	5	2	multi-exon	FALSE	canonical	3	206	junction_5	6.73498329619309	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGAGTGCTTATCATTCAC	NA	False	NA	36	True	AATGAA	-22	NA	45314440	45321578	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_45314599_45319403_45319443_45319597_45319673_45320810_45320848_45321000_45321032_45321289
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130101	chr9	+	584	5	NNC	ENSMUSG00000059412.8	novel	632	6	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	95.365087951514	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGAGTGCTTATCATTC	NA	False	NA	34	True	AATGAA	-20	NA	45314478	45321576	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_45314599_45319403_45319443_45319597_45319673_45320810_45320874_45321289
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130139	chr9	+	312	1	ISM	ENSMUSG00000032083.9	ENSMUST00000034588.9	1035	4	1575	0	1434	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTCTTTCTTTGGGGGA	NA	False	NA	NA	False	AATAAA	-17	NA	46141452	46141764	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_46141500_46141800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130144	chr9	+	1839	14	NNC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	-27	120	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	198.854262593185	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCCTCTGCGTTCATGTC	NA	False	NA	14	True	ATTAAA	-21	NA	46184463	46192902	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187501_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130158	chr9	+	1406	9	ISM	ENSMUSG00000032076.21	ENSMUST00000114547.8	4444	10	257712	2791	257596	2	3prime_fragment	FALSE	canonical	3	143	junction_7	61.313614923604	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCTGTTTGACACCTCT	1846	False	NA	5	True	AAAACA	-23	NA	47699266	47761887	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47759464_47759597_47761569
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130159	chr9	+	1311	8	ISM	ENSMUSG00000032076.21	ENSMUST00000152459.8	1784	12	257758	20856	257596	-4717	internal_fragment	FALSE	canonical	3	173	junction_7	55.5356109323797	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAAGTGTATTTGTCTAC	1846	False	NA	NA	False	AATAAA	-30	NA	47699266	47741029	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47740674
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130168	chr9	+	256	1	ISM	ENSMUSG00000032076.21	ENSMUST00000114548.8	4482	10	320161	2796	319961	2	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCTGTTTGACACCTCT	NA	False	NA	5	True	AAAACA	-23	NA	47761631	47761887	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_47761600_47761900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130216	chr9	-	1854	5	FSM	ENSMUSG00000042396.11	ENSMUST00000170000.4	1773	5	-67	-14	-65	14	multi-exon	FALSE	canonical	3	400	junction_3	15.188400179084	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGACGTCATTGACAT	NA	False	NA	10	True	ATTAAA	-26	NA	48406664	48399986	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48406454
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130219	chr9	-	1820	5	NNC	ENSMUSG00000042396.11	novel	1773	5	NA	NA	-37	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	182.660203656954	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTCTTTATTTTGACG	NA	False	NA	0	True	ATTAAA	-16	NA	48406636	48399996	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_48401289_48402143_48402239_48404706_48404795_48405318_48405482_48406454
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130236	chr9	-	433	1	NIC	ENSMUSG00000032271.14	novel	737	3	NA	NA	5053	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTCTCTGAATGCAG	NA	False	NA	-3	True	ATTAAA	-20	NA	48503622	48503189	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_48503200_48503600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130246	chr9	+	1493	5	FSM	ENSMUSG00000032264.10	ENSMUST00000215706.2	1272	5	-201	-20	-32	20	multi-exon	FALSE	canonical	3	254	junction_4	30.2189923723476	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATTTTCTGTTTGGAAG	NA	False	NA	NA	False	NA	NA	NA	48966880	48973325	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130258	chr9	-	255	2	ISM	ENSMUSG00000040219.5	ENSMUST00000055096.5	3628	22	46007	1301	45997	-1301	3prime_fragment	FALSE	canonical	3	32	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATGTCTGCCGGGTTTT	NA	False	NA	0	True	AATAAA	-27	NA	49351518	49349563	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_49349757_49351456
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130271	chr9	-	757	2	Genic_Genomic	ENSMUSG00000058443.6	novel	768	1	NA	NA	-14	564	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGGGACACTTTCATAT	NA	False	NA	NA	False	TTTAAA	-23	NA	50256282	50254936	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr9_-_50254949_50255537
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130276	chr9	+	770	1	Antisense	novelGene_ENSMUSG00000058443.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACCTGTCTCTTTTCATA	NA	False	NA	NA	False	NA	NA	NA	50255509	50256279	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr9_+_50255500_50256300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130292	chr9	-	1148	7	NIC	ENSMUSG00000032067.7	novel	589	7	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_6	39.4574313518872	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGTTTTCAGGATTTATT	7944	False	NA	NA	False	AATAAA	-18	NA	50439966	50432916	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_50433637_50433828_50433900_50436022_50436080_50436561_50436585_50438169_50438250_50439445_50439533_50439856
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130307	chr9	+	562	3	NNC	ENSMUSG00000039016.6	novel	518	2	NA	NA	-26496	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	670.5	12461	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGGATTCAACATAATCA	9587	False	NA	43	True	AATAAA	-37	NA	50488713	50516642	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_50488726_50515199_50515340_50516232
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130361	chr9	-	606	3	ISM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	238	23505	238	-14105	5prime_fragment	FALSE	canonical	3	1166	junction_2	138.5	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTAATTTGTGAACAT	NA	False	NA	NA	False	AGTAAA	-19	NA	50570842	50569437	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_50569590_50569987_50570090_50570490
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130389	chr9	-	825	3	NIC	ENSMUSG00000037971.11	novel	2082	4	NA	NA	8	9	combination_of_known_splicesites	TRUE	canonical	2	3	junction_1	11	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTATTTGTTTACTCTAA	NA	False	NA	NA	False	AATAAA	-22	NA	50679452	50675017	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_50675317_50675995_50676227_50679157
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130399	chr9	+	2057	2	Genic_Genomic	ENSMUSG00000111162.2_ENSMUSG00000110825.2	novel	1007	1	NA	NA	-75	92	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAATAATAGGATGAAGC	NA	False	NA	NA	False	AATAAA	-19	NA	51533969	51568853	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr9_+_51535272_51568098
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130445	chr9	+	279	1	ISM	ENSMUSG00000034487.5	ENSMUST00000037853.5	3642	8	17470	94	10878	-94	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAACTCCATGTACTTTAA	NA	False	NA	NA	False	AATAAA	-22	NA	53312794	53313073	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_53312800_53313100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130493	chr9	+	1721	11	NNC	ENSMUSG00000032279.12	novel	2580	11	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	573.751766881811	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAATGATGTAATTTTG	NA	False	NA	56	True	AATAAA	-23	NA	54493759	54511230	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_54493828_54497141_54497209_54499683_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130507	chr9	+	1818	12	NNC	ENSMUSG00000032279.12	novel	1812	12	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	721.870859080821	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAATGAATGATGTAATTT	NA	False	NA	54	True	AATAAA	-21	NA	54493764	54511228	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_54493828_54497141_54497205_54499444_54499547_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130510	chr9	+	1713	11	NNC	ENSMUSG00000032279.12	novel	2580	11	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	573.751766881811	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAATGATGTAATTTTG	NA	False	NA	56	True	AATAAA	-23	NA	54493773	54511230	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_54493828_54497141_54497209_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130520	chr9	-	1231	11	FSM	ENSMUSG00000061559.16	ENSMUST00000051822.13	1187	11	-37	-7	-35	7	multi-exon	FALSE	canonical	3	455	junction_10	209.060852385137	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGAACGTGCTGTTCTTT	5386	False	NA	4	True	AATAAA	-26	NA	54641838	54624435	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641758
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130533	chr9	-	1183	10	NNC	ENSMUSG00000061559.16	novel	1187	11	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	369.644874620673	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTGTGAACGTGCTGT	5428	False	NA	-1	True	AATAAA	-21	NA	54641796	54624440	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635575_54638658_54638722_54641758
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130537	chr9	-	1173	11	NNC	ENSMUSG00000061559.16	novel	1187	11	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	359.641488151743	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTGTGAACGTGCTGT	5437	False	NA	-1	True	AATAAA	-21	NA	54641787	54624440	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_54624720_54626534_54626614_54627543_54627637_54630119_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641758
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130538	chr9	-	1179	11	FSM	ENSMUSG00000061559.16	ENSMUST00000130368.8	1162	11	-15	-2	5	2	multi-exon	FALSE	canonical	3	105	junction_9	343.30050975785	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTGTGAACGTGCTGT	5428	False	NA	-1	True	AATAAA	-21	NA	54641796	54624440	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637941_54638670_54638722_54641758
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130539	chr9	-	1181	11	NNC	ENSMUSG00000061559.16	novel	1187	11	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_10	330.68589325824	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTGTGAACGTGCTGT	5428	False	NA	-1	True	AATAAA	-21	NA	54641796	54624440	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641761
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130591	chr9	+	598	6	FSM	ENSMUSG00000032301.14	ENSMUST00000169008.8	562	6	-15	-21	0	21	multi-exon	FALSE	canonical	3	1724	junction_4	75.8957179292745	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTTAAGGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-29	NA	54858073	54862337	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_54858188_54859365_54859393_54859624_54859668_54859962_54860126_54861946_54862025_54862164
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130595	chr9	+	1237	10	NIC	ENSMUSG00000032301.14	novel	1165	9	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	771.608277128579	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTATGGTGAAAGGATACT	NA	False	NA	1	True	AATAAA	-14	NA	54858085	54865313	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_54858188_54858627_54858713_54859365_54859393_54859624_54859668_54859962_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130612	chr9	+	1311	9	NNC	ENSMUSG00000032301.14	novel	768	7	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	622.684899748661	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGGTGAAAGGATACTT	NA	False	NA	2	True	AATAAA	-15	NA	54858367	54865314	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_54858628_54859365_54859393_54859624_54859668_54859962_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130615	chr9	+	413	1	Genic_Genomic	ENSMUSG00000032301.14	novel	NA	NA	NA	NA	6529	15	mono-exon	FALSE	NA	NA	NA	NA	NA	1236	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTCTCTGTGGCAACAA	1061	False	NA	17	True	AATAAA	-30	NA	54864916	54865329	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr9_+_54864900_54865300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130656	chr9	-	262	1	Genic_Genomic	ENSMUSG00000032314.15	novel	NA	NA	NA	NA	32749	5	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATCAGAAACATGCCTAGC	NA	False	NA	-8	True	AATAAA	-35	NA	55362048	55361786	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr9_-_55361800_55362000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130678	chr9	+	1824	7	FSM	ENSMUSG00000032320.8	ENSMUST00000114276.3	2024	7	13	187	0	-187	multi-exon	FALSE	canonical	3	320	junction_5	26.0666879795309	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGTTTTTGTTTTTT	973	False	NA	8	True	AATAAA	-19	NA	55949153	55966174	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_55949489_55949858_55949965_55952415_55952613_55960190_55960305_55963442_55963540_55964710_55964854_55965342
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130702	chr9	+	624	5	NNC	ENSMUSG00000097870.3	novel	2655	3	NA	NA	-2	4698	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2.04633819296811	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACAGAGGAAGTTTGTAA	NA	False	NA	NA	False	CATAAA	-25	NA	56513974	56526455	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_56514031_56516225_56516370_56519300_56519506_56524511_56524549_56526273
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130746	chr9	-	892	8	FSM	ENSMUSG00000032299.11	ENSMUST00000065358.9	858	8	-25	-9	-25	5	multi-exon	FALSE	canonical	3	701	junction_7	157.218553197095	1403	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGCTTGCTTTTGTTGG	6252	False	NA	5	True	AATAAA	-24	NA	57065640	57062313	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064125_57064350_57064423_57065555
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130824	chr9	+	264	2	Antisense	novelGene_ENSMUSG00000040722.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAGTAATGTTAATAATG	NA	False	NA	NA	False	AATAAA	-15	NA	57361069	57361817	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr9_+_57361142_57361625
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130834	chr9	-	541	2	Antisense	novelGene_ENSMUSG00000062309.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGACTCAAGCCTGGTCC	9632	False	NA	3	True	AATAAA	-21	NA	57411747	57411061	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr9_-_57411351_57411495
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130865	chr9	+	691	5	NNC	ENSMUSG00000000088.8	novel	645	5	NA	NA	-36	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4071.94231141601	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTCTTGTGATGTTGTC	336	False	NA	23	True	AATAAA	-23	NA	57428520	57439710	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_57428699_57436238_57436356_57437523_57437646_57438951_57439080_57439564
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130913	chr9	-	236	1	ISM	ENSMUSG00000032312.8	ENSMUST00000034863.8	2749	13	18772	0	1880	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCTCGGCGCTTCCTC	NA	False	NA	-25	True	AATAAA	-23	NA	57534164	57533928	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_57533900_57534200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130924	chr9	+	1994	8	NNC	ENSMUSG00000038957.14	novel	5708	7	NA	NA	-5	-1240	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_7	86.0609655762609	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCCTAGAGTGAAGTG	NA	False	NA	16	True	AATAAA	-26	NA	57615844	57657446	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_57615983_57620663_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443_57655716_57657071
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130966	chr9	+	249	1	ISM	ENSMUSG00000055720.11	ENSMUST00000216925.2	1319	11	18741	0	9648	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	9712	False	NA	16	True	AATATA	-17	NA	57837002	57837251	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_57837000_57837300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000130981	chr9	-	261	1	ISM	ENSMUSG00000051243.15	ENSMUST00000163200.3	4123	2	5158	0	4015	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGTGAGATTTTTGGGGT	NA	False	NA	1	True	AATAAA	-20	NA	58103840	58103579	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_58103600_58103800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131013	chr9	+	1925	7	NNC	ENSMUSG00000032336.18	novel	2024	8	NA	NA	-3	1	intron_retention	FALSE	canonical	0	0	junction_5	144.809836989373	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAATAATACTCTTTAT	13	False	NA	NA	False	AATAAA	-17	NA	58489685	58560162	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58558507_58558616_58559141
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131040	chr9	-	232	1	NIC	ENSMUSG00000074269.11	novel	516	3	NA	NA	6183	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATCAATGTTTTATT	NA	False	NA	-5	True	AATAAA	-18	NA	58560392	58560160	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_58560200_58560400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131059	chr9	+	1067	1	ISM	ENSMUSG00000025236.12	ENSMUST00000214361.2	5148	6	23551	0	3486	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59222416	59223483	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_59222400_59223500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131068	chr9	-	207	1	ISM	ENSMUSG00000025234.12	ENSMUST00000171975.8	6971	14	96307	1843	15487	-1843	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTTATGTTTATTTTTA	NA	False	NA	0	True	AATAAA	-28	NA	59297590	59297383	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_59297400_59297600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131085	chr9	+	291	1	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	25279	0	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTGGGTTGCTTGTGT	NA	False	NA	32	True	AATAAA	-24	NA	59472101	59472392	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_59472100_59472400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131087	chr9	+	191	1	Intergenic	novelGene_452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAGCTGGAAGGAACAG	4476	False	NA	NA	False	NA	NA	NA	59491232	59491423	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr9_+_59491200_59491400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131099	chr9	+	2251	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-19	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	7019.72338771265	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1850	False	NA	17	True	AATAAA	-17	NA	59563836	59586655	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579013_59579203_59579357_59582850_59583018_59585326_59585513_59586010
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131104	chr9	+	2222	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	6942.97369719921	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1867	False	NA	17	True	AATAAA	-17	NA	59563853	59586655	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_59563933_59572490_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579013_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131145	chr9	-	1463	2	FSM	ENSMUSG00000051705.14	ENSMUST00000051039.5	3682	2	11	2208	0	3	multi-exon	FALSE	canonical	3	38	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGGTGTGTGGTGCATCT	6429	False	NA	-19	True	AATAAA	-18	NA	59657921	59643749	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_59645152_59657860
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131149	chr9	-	1319	1	ISM	ENSMUSG00000051705.14	ENSMUST00000051039.5	3682	2	12862	2210	12835	1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGGGTGTGTGGTGCAT	NA	False	NA	-21	True	AATAAA	-16	NA	59645070	59643751	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_59643800_59645100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131151	chr9	-	1573	3	FSM	ENSMUSG00000051705.14	ENSMUST00000213257.2	764	3	-16	-793	0	1	multi-exon	FALSE	canonical	1	1	junction_2	9	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGGGTGTGTGGTGCAT	6429	False	NA	-21	True	AATAAA	-16	NA	59657921	59643751	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_59645152_59647222_59647335_59657860
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131152	chr9	-	1554	3	FSM	ENSMUSG00000051705.14	ENSMUST00000163586.9	3570	3	0	2016	0	1	multi-exon	FALSE	canonical	3	14	junction_2	2.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGGGTGTGTGGTGCAT	6429	False	NA	-21	True	AATAAA	-16	NA	59657921	59643751	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_59645152_59647222_59647316_59657860
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131160	chr9	-	217	1	ISM	ENSMUSG00000032292.9	ENSMUST00000130831.8	2686	5	6993	54	5750	-54	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTTTGCTGTATTTTAT	NA	False	NA	1	True	NA	NA	NA	59850324	59850107	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_59850100_59850300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131191	chr9	-	503	3	NNC	ENSMUSG00000007892.9	novel	499	3	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	2	1164	junction_2	5542	1016	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTCTCACTTGTAAGCCA	NA	False	NA	-21	True	AATAAA	-21	NA	61821824	61820558	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_61820804_61821169_61821242_61821638
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131200	chr9	-	1263	1	Genic_Genomic	ENSMUSG00000007892.9	novel	NA	NA	NA	NA	3	7	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTCTCACTTGTAAGCCA	NA	False	NA	-21	True	AATAAA	-21	NA	61821821	61820558	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr9_-_61820600_61821800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131206	chr9	-	493	3	NNC	ENSMUSG00000007892.9	novel	499	3	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6124	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGACTGGTCTCACTTGTA	NA	False	NA	-26	True	AATAAA	-16	NA	61821821	61820563	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_61820804_61821169_61821236_61821634
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131210	chr9	-	499	3	NNC	ENSMUSG00000007892.9	novel	499	3	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6124	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGACTGGTCTCACTTGTA	NA	False	NA	-26	True	AATAAA	-16	NA	61821821	61820563	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_61820804_61821169_61821242_61821634
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131227	chr9	-	891	2	ISM	ENSMUSG00000007892.9	ENSMUST00000008036.9	499	3	3	-1	3	1	intron_retention	FALSE	canonical	3	12248	junction_1	0	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGACTGGTCTCACTTGT	NA	False	NA	-27	True	AATAAA	-15	NA	61821821	61820564	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_61820804_61821169
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131242	chr9	-	863	2	NIC	ENSMUSG00000007892.9	novel	499	3	NA	NA	3	1	intron_retention	FALSE	canonical	3	11557	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGACTGGTCTCACTTGT	NA	False	NA	-27	True	AATAAA	-15	NA	61821821	61820564	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_61821245_61821638
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131276	chr9	+	707	5	NNC	ENSMUSG00000032249.15	novel	2113	7	NA	NA	17	39	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	237.680983673495	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTATTTCCCCCCCTCCTT	NA	False	NA	10	True	AATAAA	-21	NA	62248627	62285102	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62285070
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131312	chr9	+	1037	7	NIC	ENSMUSG00000032249.15	novel	640	5	NA	NA	-35	37	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	198.478728219312	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTATTTCCCCCCCTCC	NA	False	NA	8	True	AATAAA	-19	NA	62249148	62285100	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_62249293_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62282034_62284581_62284646_62284835
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131325	chr9	-	799	1	ISM	ENSMUSG00000041729.16	ENSMUST00000048043.12	3610	12	116754	0	7711	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTATCAAGCCATGTT	NA	False	NA	-7	True	AATAAA	-19	NA	62327572	62326773	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_62326800_62327600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131332	chr9	-	221	1	Intergenic	novelGene_453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAAGGACGCCTGAGGT	NA	False	NA	NA	False	NA	NA	NA	62760328	62760107	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr9_-_62760100_62760300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131350	chr9	-	2137	14	FSM	ENSMUSG00000032405.11	ENSMUST00000098651.6	5564	14	-4	3431	0	1081	multi-exon	FALSE	canonical	3	79	junction_1	15.6049605221996	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCAGTTTTACTTTTG	NA	False	NA	NA	False	ATTAAA	-25	NA	62888165	62789080	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_62789544_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131353	chr9	-	185	1	Intergenic	novelGene_454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGTTCCAAGTCA	3897	False	NA	NA	False	NA	NA	NA	62793023	62792838	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr9_-_62792800_62793000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131356	chr9	-	520	3	ISM	ENSMUSG00000058444.9	ENSMUST00000034920.11	2310	22	180541	0	105782	0	3prime_fragment	FALSE	canonical	3	88	junction_1	8.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTTTGTCTCAGCAAGT	4680	False	NA	-1	True	AATAAA	-18	NA	63104643	63071049	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_63071473_63101483_63101530_63104592
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131363	chr9	+	2584	10	NNC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	13	1566	at_least_one_novel_splicesite	FALSE	canonical	3	162	junction_6	67.8911619914051	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTAATGTGTTTTGTT	9227	False	NA	NA	False	ATTAAA	-19	NA	63509954	63549176	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543668_63543766_63546321_63546427_63546874_63546925_63547488
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131376	chr9	-	908	2	NNC	ENSMUSG00000036867.8	novel	2971	4	NA	NA	40883	-169	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTCTTTCCTTTTTTA	NA	False	NA	-1	True	AATACA	-19	NA	63883386	63860526	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_63861339_63883290
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131417	chr9	+	1362	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-147	at_least_one_novel_splicesite	FALSE	canonical	2	841	junction_6	5901.11588317554	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080655	64085801	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084323_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131418	chr9	+	1434	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-147	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_7	6006.71232769261	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080655	64085801	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64084960_64085087_64085178_64085300_64085504
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131420	chr9	+	1642	9	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-147	intron_retention	FALSE	canonical	3	16882	junction_3	1404.88054986002	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080655	64085801	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084760_64085002_64085087_64085178_64085300_64085504
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131421	chr9	+	1484	9	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-147	intron_retention	FALSE	canonical	3	16882	junction_3	1494.01890362037	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080655	64085801	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085300_64085504
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131422	chr9	+	1319	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-147	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6159.02867722773	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080655	64085801	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_64080716_64082178_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131424	chr9	+	1382	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-147	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	6010.40116571594	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080655	64085801	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084750_64085002_64085087_64085178_64085300_64085504
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131425	chr9	+	1385	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-147	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	6095.37274404846	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080655	64085801	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085185_64085300_64085504
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131426	chr9	+	1379	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-146	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6160.20075630857	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGTGACTCTTAAATT	NA	False	NA	39	True	AATAAA	-21	NA	64080655	64085802	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_64080716_64082105_64082278_64082475_64082569_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131431	chr9	+	1379	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-147	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5999.94651828016	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080655	64085801	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64082992_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131436	chr9	+	1418	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-147	at_least_one_novel_splicesite	TRUE	canonical	2	171	junction_3	6107.54371633258	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080655	64085801	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082839_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131471	chr9	+	1527	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	35	-147	at_least_one_novel_splicesite	FALSE	canonical	3	407	junction_1	6034.17045348641	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080709	64085801	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_64080905_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131473	chr9	+	1534	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	35	-147	at_least_one_novel_splicesite	FALSE	canonical	3	419	junction_1	6030.49106982258	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080709	64085801	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_64080912_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131515	chr9	+	190	1	Intergenic	novelGene_455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTATGGTTGTGTATG	7799	False	NA	12	True	NA	NA	NA	64187118	64187308	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr9_+_64187100_64187300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131536	chr9	+	1223	8	NNC	ENSMUSG00000032397.8	novel	1841	8	NA	NA	5	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	994.308579375844	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTGAGTTTCTCACCAT	9552	False	NA	22	True	AATAAA	-22	NA	64188871	64212082	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_64188930_64195395_64195530_64196997_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131601	chr9	+	501	1	NIC	ENSMUSG00000032397.8	novel	1841	8	NA	NA	22696	11	mono-exon	FALSE	NA	NA	NA	NA	NA	595	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTTTCTCACCATGAT	NA	False	NA	25	True	AATAAA	-25	NA	64211584	64212085	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_64211600_64212100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131603	chr9	+	220	1	Intergenic	novelGene_456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACAGCTGGGAAGTATAAA	NA	False	NA	NA	False	AAAAAG	-21	NA	64223919	64224139	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr9_+_64223900_64224100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131609	chr9	-	833	4	FSM	ENSMUSG00000004771.13	ENSMUST00000171100.2	508	4	-26	-299	2	1	multi-exon	TRUE	canonical	3	7	junction_3	456.48244459368	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTGTTTACTCTTCATC	NA	False	NA	-3	True	AATAAA	-21	NA	64645038	64623885	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_64624271_64632783_64632865_64633905_64634100_64644865
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131636	chr9	+	161	1	Intergenic	novelGene_457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGTATCCAAATTCACA	NA	False	NA	NA	False	NA	NA	NA	64939007	64939168	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr9_+_64939000_64939200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131649	chr9	+	1504	4	ISM	ENSMUSG00000041837.5	ENSMUST00000048184.4	2419	5	8516	0	7966	0	3prime_fragment	FALSE	canonical	3	276	junction_1	29.227080289044	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGCCCCTGATTTATT	NA	False	NA	42	True	AATAAA	-25	NA	65261901	65266925	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_65262031_65263526_65263764_65263999_65264088_65265875
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131677	chr9	+	1186	4	ISM	ENSMUSG00000059183.13	ENSMUST00000132966.8	2563	8	-14	11453	-8	-6313	5prime_fragment	FALSE	canonical	3	143	junction_2	18.6607133363712	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGATCTTCAGTGGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	65343055	65348246	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131679	chr9	+	526	2	ISM	ENSMUSG00000059183.13	ENSMUST00000132966.8	2563	8	-6	15130	0	-9990	5prime_fragment	FALSE	canonical	3	184	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTCTTTCTTTCT	NA	False	NA	NA	False	ACTAAA	-21	NA	65343063	65344569	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_65343290_65344269
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131684	chr9	+	294	1	Genic_Genomic	ENSMUSG00000059183.13	novel	NA	NA	NA	NA	9227	7	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGCCCAGGGTATATGA	NA	False	NA	NA	False	NA	NA	NA	65360049	65360343	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr9_+_65360000_65360300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131690	chr9	+	571	1	ISM	ENSMUSG00000032388.8	ENSMUST00000034955.8	2680	9	25939	1014	18097	-1014	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGGCTTCTGTGATGA	NA	False	NA	11	True	AATAAA	-13	NA	65394167	65394738	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_65394200_65394700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131697	chr9	+	417	1	ISM	ENSMUSG00000041064.15	ENSMUST00000047099.13	3685	12	8346	0	8325	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCCTCCTGCCTGGTCT	NA	False	NA	27	True	AATAAA	-17	NA	65502832	65503249	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_65502800_65503200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131739	chr9	+	208	1	Intergenic	novelGene_458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGACCTGCAAATGGGGA	NA	False	NA	NA	False	NA	NA	NA	65716772	65716980	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr9_+_65716800_65717000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131796	chr9	+	708	3	NNC	ENSMUSG00000032383.8	novel	3305	4	NA	NA	4727	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1045	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGGTGTGGGCTGTGTT	6301	False	NA	17	True	AATAAA	-17	NA	65972239	65973906	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_65972433_65972768_65972954_65973576
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131825	chr9	-	591	1	ISM	ENSMUSG00000032376.13	ENSMUST00000127569.8	5607	15	74695	3220	1892	20	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTCTCTGGTCTTCT	NA	False	NA	1	True	NA	NA	NA	66425729	66425138	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_66425100_66425700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131853	chr9	+	486	4	NNC	ENSMUSG00000036781.14	novel	575	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5450.5021379278	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTCCCTCTGCTTCTCT	NA	False	NA	34	True	AATAAA	-18	NA	66853373	66856798	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_66853463_66854112_66854222_66854868_66854969_66856610
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131856	chr9	+	484	4	NNC	ENSMUSG00000036781.14	novel	575	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5450.5021379278	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTCCCTCTGCTTCTCT	NA	False	NA	34	True	AATAAA	-18	NA	66853373	66856798	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_66853463_66854112_66854222_66854868_66854980_66856623
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131889	chr9	-	630	1	ISM	ENSMUSG00000032366.16	ENSMUST00000113696.8	1714	8	20688	0	9606	0	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGGTCCTGTCGTCTG	NA	False	NA	0	True	AATAAA	-26	NA	66930501	66929871	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_66929900_66930500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131925	chr9	+	2375	11	FSM	ENSMUSG00000011958.18	ENSMUST00000034754.12	2464	11	29	60	-9	2	multi-exon	FALSE	canonical	3	26	junction_9	104.017354321286	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTCTTAATTACCTTC	NA	False	NA	19	True	AATAAA	-19	NA	69896776	69915539	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69911587_69911624_69914345
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131944	chr9	+	634	4	FSM	ENSMUSG00000033543.18	ENSMUST00000119905.8	622	4	-11	-1	0	0	multi-exon	FALSE	canonical	3	4	junction_3	423.805248774586	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAGTAATACTTGATG	NA	False	NA	18	True	AATAAA	-16	NA	69919835	69930020	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_69919944_69922573_69922693_69924100_69924206_69929718
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131962	chr9	+	792	6	NNC	ENSMUSG00000033543.18	novel	791	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	408.79461835988	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAGTAATACTTGATG	NA	False	NA	18	True	AATAAA	-16	NA	69919852	69930020	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_69919944_69922573_69922693_69924100_69924206_69924425_69924474_69926670_69926798_69929718
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131974	chr9	+	302	1	ISM	ENSMUSG00000033543.18	ENSMUST00000118198.8	893	5	9887	128	3389	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAGTAATACTTGATG	NA	False	NA	18	True	AATAAA	-16	NA	69929718	69930020	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_69929700_69930000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000131981	chr9	-	1587	9	FSM	ENSMUSG00000032218.8	ENSMUST00000034742.8	1531	9	-42	-14	-42	14	multi-exon	FALSE	canonical	3	1324	junction_2	68.4557338723353	1127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATTTGTATAGTCTACA	NA	False	NA	6	True	AATAAA	-28	NA	70328871	70314959	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132010	chr9	+	440	1	Intergenic	novelGene_459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACTCGGGGATAGTTCA	7164	False	NA	NA	False	NA	NA	NA	70761338	70761778	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr9_+_70761300_70761800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132041	chr9	+	183	1	Intergenic	novelGene_460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGCATCTTTGCTGGC	NA	False	NA	8	True	NA	NA	NA	72425158	72425341	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr9_+_72425200_72425300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132048	chr9	+	1887	1	ISM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	85619	1	2126	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72655246	72657133	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_72655200_72657100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132056	chr9	-	955	2	FSM	ENSMUSG00000086158.3	ENSMUST00000124565.3	711	2	-16	-228	-10	228	multi-exon	FALSE	canonical	3	81	junction_1	0	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACAGTGACCTCGTTCAT	NA	False	NA	NA	False	AATAAA	-22	NA	72892674	72886775	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_72887479_72892422
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132069	chr9	+	315	1	ISM	ENSMUSG00000089865.3	ENSMUST00000149692.2	4383	16	56834	319	56834	-319	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTCTCAAGTCTGGCG	NA	False	NA	NA	False	AATAAA	-23	NA	72922967	72923282	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_72923000_72923300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132080	chr9	+	355	1	Genic_Genomic	ENSMUSG00000098332.3	novel	NA	NA	NA	NA	2700	5	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATTTATAAAGGTAGTTC	NA	False	NA	NA	False	AATAAA	-24	NA	72949711	72950066	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr9_+_72949700_72950100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132097	chr9	+	494	1	ISM	ENSMUSG00000032215.16	ENSMUST00000034738.14	1543	6	9392	0	8244	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTACATATCTCTTATTT	NA	False	NA	13	True	AATAAA	-18	NA	73030121	73030615	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_73030100_73030600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132110	chr9	+	422	4	NIC	ENSMUSG00000007656.14	novel	3944	4	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	2392.89146338808	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTCTACTGTCCTTT	NA	False	NA	27	True	ATTAAA	-14	NA	74944950	74964105	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_74945002_74945188_74945248_74959514_74959638_74963916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132140	chr9	+	455	4	FSM	ENSMUSG00000007656.14	ENSMUST00000167885.8	540	4	86	-1	-12	1	multi-exon	FALSE	canonical	2	4	junction_1	2734.39292470315	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTCTACTGTCCTTT	NA	False	NA	27	True	ATTAAA	-14	NA	74945186	74964105	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_74945244_74950494_74950581_74959514_74959638_74963916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132152	chr9	+	307	1	ISM	ENSMUSG00000007656.14	ENSMUST00000169492.8	3963	4	22393	0	7956	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGTTTTGTCTTATTT	NA	False	NA	20	True	AATAAA	-30	NA	74967288	74967595	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_74967300_74967600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132172	chr9	+	350	2	NNC	ENSMUSG00000042487.7	novel	4569	10	NA	NA	15936	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCCTATGCTTAAGAAAAC	NA	False	NA	5	True	AATAAA	-14	NA	75372297	75373714	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_75372409_75373475
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132180	chr9	+	478	1	ISM	ENSMUSG00000109032.2	ENSMUST00000209180.2	2184	3	3353	0	3353	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTATGTGTGTGCATT	NA	False	NA	16	True	AATAAA	-21	NA	75393485	75393963	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_75393500_75394000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132186	chr9	-	1422	1	ISM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	60120	409	3527	-409	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCAGACTGTTGGTCATT	3395	False	NA	0	True	AATAAA	-19	NA	75406819	75405397	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_75405400_75406800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132212	chr9	+	1692	1	ISM	ENSMUSG00000032349.14	ENSMUST00000034904.14	2782	8	65464	0	41537	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCTTCTGTTGTTTG	NA	False	NA	11	True	ATTAAA	-19	NA	77890109	77891801	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_77890100_77891800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132223	chr9	+	492	2	ISM	ENSMUSG00000009828.16	ENSMUST00000142402.2	3952	7	11561	2511	11561	4	3prime_fragment	FALSE	canonical	3	114	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTCTCATTATTTTCTT	NA	False	NA	7	True	TATAAA	-18	NA	78074165	78075224	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_78074315_78074881
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132228	chr9	+	530	1	NIC	ENSMUSG00000009828.16	novel	6560	14	NA	NA	12090	4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTCTCATTATTTTCTT	NA	False	NA	7	True	TATAAA	-18	NA	78074694	78075224	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_78074700_78075200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132251	chr9	+	919	7	NNC	ENSMUSG00000032348.7	novel	977	7	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1259.06896819303	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGTTGGAGAGGTGTTT	NA	False	NA	17	True	ATTAAA	-16	NA	78099294	78116631	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_78099347_78105551_78105659_78106771_78106824_78111513_78111647_78113193_78113344_78115082_78115215_78116338
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132264	chr9	+	853	7	NNC	ENSMUSG00000032348.7	novel	977	7	NA	NA	67	1	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_1	1231.91878339803	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTTGGAGAGGTGTTTG	NA	False	NA	18	True	ATTAAA	-17	NA	78099295	78116632	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_78099347_78105609_78105659_78106771_78106824_78111513_78111647_78113193_78113336_78115082_78115215_78116338
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132265	chr9	+	858	6	NIC	ENSMUSG00000032348.7	novel	977	7	NA	NA	67	0	combination_of_known_splicesites	FALSE	canonical	2	20	junction_2	1317.60683058339	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGTTGGAGAGGTGTTT	NA	False	NA	17	True	ATTAAA	-16	NA	78099295	78116631	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_78099347_78105551_78105659_78111513_78111647_78113193_78113336_78115082_78115215_78116338
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132287	chr9	+	912	7	NNC	ENSMUSG00000032348.7	novel	977	7	NA	NA	69	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1243.85757491228	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGTTGGAGAGGTGTTT	NA	False	NA	17	True	ATTAAA	-16	NA	78099297	78116631	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_78099347_78105551_78105663_78106771_78106824_78111513_78111647_78113193_78113336_78115082_78115215_78116338
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132306	chr9	+	298	1	Genic_Genomic	ENSMUSG00000032348.7	novel	NA	NA	NA	NA	17107	2	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTTGGAGAGGTGTTTGT	2939	False	NA	19	True	ATTAAA	-18	NA	78116335	78116633	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr9_+_78116300_78116600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132318	chr9	+	1182	6	Fusion	ENSMUSG00000111423.2_ENSMUSG00000110919.2	novel	348	3	NA	NA	-48	463	multi-exon	FALSE	canonical	0	0	junction_3	19858.4526023555	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78152783	78180328	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr9_+_78152947_78153027_78153212_78153639_78153873_78179219_78179395_78179475_78179660_78180085
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132322	chr9	+	1276	6	Fusion	ENSMUSG00000111423.2_ENSMUSG00000110919.2	novel	348	3	NA	NA	-48	463	multi-exon	FALSE	canonical	0	0	junction_3	19979.1893869596	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78152783	78180328	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr9_+_78152947_78153027_78153212_78153639_78153915_78179164_78179395_78179475_78179660_78180088
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132324	chr9	+	1273	6	Fusion	ENSMUSG00000111423.2_ENSMUSG00000110919.2	novel	348	3	NA	NA	-48	463	multi-exon	FALSE	canonical	0	0	junction_3	19858.4526023555	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78152783	78180328	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr9_+_78152947_78153027_78153212_78153639_78153915_78179170_78179395_78179475_78179660_78180085
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132327	chr9	+	1248	6	Fusion	ENSMUSG00000111423.2_ENSMUSG00000110919.2	novel	348	3	NA	NA	-48	463	multi-exon	FALSE	canonical	0	0	junction_3	19858.4526023555	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78152783	78180328	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr9_+_78152947_78153027_78153212_78153639_78153929_78179209_78179395_78179475_78179660_78180085
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132334	chr9	+	1251	6	Fusion	ENSMUSG00000111423.2_ENSMUSG00000110919.2	novel	348	3	NA	NA	-48	463	multi-exon	FALSE	canonical	0	0	junction_3	19858.4526023555	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78152783	78180328	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr9_+_78152947_78153027_78153212_78153639_78153915_78179192_78179395_78179475_78179660_78180085
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132336	chr9	+	1284	6	Fusion	ENSMUSG00000111423.2_ENSMUSG00000110919.2	novel	348	3	NA	NA	-48	463	multi-exon	FALSE	canonical	0	0	junction_3	19979.1893869596	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78152783	78180328	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr9_+_78152947_78153027_78153212_78153639_78153929_78179170_78179395_78179475_78179660_78180088
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132339	chr9	+	1248	6	Fusion	ENSMUSG00000111423.2_ENSMUSG00000110919.2	novel	348	3	NA	NA	-48	463	multi-exon	FALSE	canonical	0	0	junction_3	19979.1893869596	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78152783	78180328	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chr9_+_78152947_78153027_78153212_78153639_78153915_78179192_78179395_78179475_78179660_78180088
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132350	chr9	+	586	3	NNC	ENSMUSG00000110919.2	novel	348	3	NA	NA	-48	465	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1515.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78152783	78153882	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_78152951_78153035_78153212_78153639
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132431	chr9	-	1101	2	NIC	ENSMUSG00000060461.6	novel	619	3	NA	NA	-15	41	intron_retention	FALSE	canonical	3	181318	junction_1	0	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGGTGTCCGTTTGAATC	NA	False	NA	NA	False	ATTAAA	-43	NA	78275474	78274292	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_78275186_78275266
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132455	chr9	-	738	2	ISM	ENSMUSG00000060461.6	ENSMUST00000071991.6	619	3	-3	-35	-3	35	intron_retention	FALSE	canonical	3	178157	junction_1	0	692	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTTCCCGGTGTCCGTT	NA	False	NA	NA	False	ATTAAA	-37	NA	78275462	78274298	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_78274577_78275002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132500	chr9	-	571	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90659	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275441	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274530_78274985_78275186_78275266
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132502	chr9	-	553	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90659	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275440	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274530_78275002_78275186_78275266
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132512	chr9	-	572	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90659	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275441	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274548_78275002_78275186_78275266
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132513	chr9	-	588	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90659	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275440	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274548_78274985_78275186_78275266
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132537	chr9	-	650	4	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	83720.8983388656	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275441	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274574_78274796_78274849_78275002_78275186_78275266
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132541	chr9	-	570	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90659	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275436	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274574_78275025_78275186_78275266
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132561	chr9	-	993	4	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	-2749	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	84738.896810536	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78278208	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274577_78275002_78275186_78275266_78275586_78277960
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132563	chr9	-	625	4	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	-14264	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	84738.896810536	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78289723	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274577_78275002_78275186_78275266_78275446_78289703
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132564	chr9	-	628	4	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	-104214	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	84738.896810536	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78379673	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274577_78275002_78275186_78275266_78275446_78379650
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132568	chr9	-	1007	4	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	-2749	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	84738.896810536	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78278208	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274577_78275002_78275186_78275266_78275600_78277960
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132574	chr9	-	621	4	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	-1632	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	84738.896810536	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78277091	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274577_78275002_78275186_78275266_78275446_78277075
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132576	chr9	-	509	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90659	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275440	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274577_78275093_78275186_78275266
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132583	chr9	-	587	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90659	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275441	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274577_78275016_78275186_78275266
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132584	chr9	-	569	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	1	1293	junction_2	88432	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275440	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274577_78275002_78275186_78275297
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132587	chr9	-	630	4	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	-56005	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	84738.896810536	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78331464	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274577_78275002_78275186_78275266_78275446_78331439
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132589	chr9	-	958	4	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	-2749	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	84738.896810536	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78278208	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274577_78275002_78275186_78275266_78275551_78277960
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132590	chr9	-	957	4	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	-2749	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	84738.896810536	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78278208	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274577_78275002_78275186_78275266_78275586_78277996
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132592	chr9	-	454	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	89078.5	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275440	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274577_78275002_78275040_78275266
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132593	chr9	-	556	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	89078.5	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275440	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274577_78275002_78275142_78275266
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132597	chr9	-	638	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90659	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275436	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274577_78274960_78275186_78275266
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132598	chr9	-	645	4	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	-104214	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	84738.896810536	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78379673	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274577_78275002_78275186_78275266_78275471_78379658
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132605	chr9	-	632	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90659	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275440	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274577_78274970_78275186_78275266
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132609	chr9	-	552	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	89078.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275440	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274577_78275002_78275178_78275306
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132617	chr9	-	483	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	89078.5	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275440	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274577_78275002_78275178_78275375
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132625	chr9	-	523	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	89078.5	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275455	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274577_78275002_78275094_78275266
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132648	chr9	-	1000	4	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	-2749	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	84738.896810536	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78278208	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274577_78275002_78275186_78275266_78275582_78277949
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132653	chr9	-	617	4	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	3	3484	junction_1	1921.7334767224	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275440	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78274577_78274796_78274849_78275002_78275151_78275266
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132669	chr9	-	417	2	NIC	ENSMUSG00000060461.6	novel	619	3	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	1	248	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275440	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_78274577_78275266
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132752	chr9	-	1022	2	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	19	0	intron_retention	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275440	78274333	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78275178_78275262
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132805	chr9	-	652	3	NNC	ENSMUSG00000032346.8	novel	2138	3	NA	NA	143	-1288	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	1038	135	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGGTTCGGGGAGTAT	NA	False	NA	-9	True	AGTAAA	-24	NA	78285864	78284678	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78284974_78285256_78285440_78285690
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132818	chr9	-	619	3	NNC	ENSMUSG00000032346.8	novel	2138	3	NA	NA	172	-1339	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	972.5	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTGGTTTGATCACAT	NA	False	NA	-9	True	TATAAA	-16	NA	78285835	78284729	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78284966_78285256_78285440_78285635
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132821	chr9	-	576	3	NNC	ENSMUSG00000032346.8	novel	2138	3	NA	NA	172	-1339	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1052	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTGGTTTGATCACAT	NA	False	NA	-9	True	TATAAA	-16	NA	78285835	78284729	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78284974_78285256_78285440_78285686
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132840	chr9	-	1755	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	53	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	5015.73746180103	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAAAGTTAACTGACTG	7153	False	NA	NA	False	ATTAAA	-32	NA	78388953	78385720	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387788_78387971_78388920
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132847	chr9	-	1735	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	53	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6181.43384726904	468	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTGGTCAATGCTGAAA	7153	False	NA	NA	False	ATTAAA	-20	NA	78388953	78385732	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387141_78387431_78387522_78387703_78387788_78387971_78388920
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132848	chr9	-	1734	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	53	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	5015.73746180103	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTGGTCAATGCTGAAA	7153	False	NA	NA	False	ATTAAA	-20	NA	78388953	78385732	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387694_78387788_78387971_78388920
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132857	chr9	-	1708	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	53	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5952.15864118186	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	7153	False	NA	98	True	ATTAAA	-18	NA	78388953	78385734	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78386108_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387788_78387971_78388920
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132859	chr9	-	1752	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	53	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	6371.11048533351	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	7153	False	NA	98	True	ATTAAA	-18	NA	78388953	78385734	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387788_78387971_78388909
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132860	chr9	-	1826	7	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	53	-4	intron_retention	FALSE	canonical	0	0	junction_5	5022.48688953546	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	7153	False	NA	98	True	ATTAAA	-18	NA	78388953	78385734	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78386141_78386239_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387788_78387971_78388920
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132861	chr9	-	1728	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	53	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	5015.73746180103	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	7153	False	NA	98	True	ATTAAA	-18	NA	78388953	78385734	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387801_78387971_78388920
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132863	chr9	-	1471	6	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	140	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7347.36566124213	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	8465	False	NA	98	True	ATTAAA	-18	NA	78387641	78385734	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386901_78387057_78387133_78387431_78387520
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132869	chr9	-	1461	6	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	140	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7221.66152626942	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	8465	False	NA	98	True	ATTAAA	-18	NA	78387641	78385734	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386901_78387057_78387141_78387431_78387522
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132871	chr9	-	1730	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	53	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6181.43384726904	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	7153	False	NA	98	True	ATTAAA	-18	NA	78388953	78385734	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387042_78387129_78387431_78387522_78387703_78387788_78387971_78388920
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132877	chr9	-	1827	7	NIC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	53	-4	intron_retention	FALSE	canonical	3	9075	junction_6	2286.64497074256	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	7153	False	NA	98	True	ATTAAA	-18	NA	78388953	78385734	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387971_78388920
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132880	chr9	-	1818	7	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	53	-4	intron_retention	FALSE	canonical	0	0	junction_5	5305.64050222863	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	7153	False	NA	98	True	ATTAAA	-18	NA	78388953	78385734	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387431_78387522_78387703_78387788_78387971_78388920
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132882	chr9	-	1846	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	1020	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	6362.29279683457	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	693	False	NA	98	True	ATTAAA	-18	NA	78395413	78385734	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387788_78387971_78395275
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132887	chr9	-	1745	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	53	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6333.98655134766	353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	7153	False	NA	98	True	ATTAAA	-18	NA	78388953	78385734	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386901_78387057_78387133_78387431_78387522_78387703_78387788_78387971_78388920
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132899	chr9	-	1797	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	-11	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	6278.60065002139	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	NA	False	NA	98	True	ATTAAA	-18	NA	78396444	78385734	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387788_78387971_78396355
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132901	chr9	-	1451	6	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	138	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5850.26640760914	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	8463	False	NA	98	True	ATTAAA	-18	NA	78387643	78385734	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386921_78387057_78387133_78387431_78387522
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132973	chr9	-	1174	3	NIC	ENSMUSG00000032330.8	novel	659	4	NA	NA	-56	1	intron_retention	FALSE	canonical	3	5621	junction_2	538.5	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCTCCCTTTTCACTT	NA	False	NA	-13	True	AATAAA	-17	NA	79667048	79662686	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_79663644_79665771_79665862_79666921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000132981	chr9	-	552	5	NNC	ENSMUSG00000032330.8	novel	659	4	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	3098.48612228617	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTCCCTTTTCACT	NA	False	NA	-14	True	AATAAA	-16	NA	79667022	79662687	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_79662888_79663402_79663479_79663558_79663644_79665771_79665862_79666921
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133006	chr9	+	422	1	ISM	ENSMUSG00000034252.15	ENSMUST00000037484.15	5111	23	76859	770	1717	12	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTTAGTGAACTTGCA	NA	False	NA	19	True	AATAAA	-30	NA	80051043	80051465	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_80051000_80051500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133012	chr9	+	716	2	FSM	ENSMUSG00000079225.4	ENSMUST00000055820.7	638	2	-60	-18	-60	18	multi-exon	FALSE	canonical	3	2455	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAAGGACTGAGTCTGTA	NA	False	NA	NA	False	NA	NA	NA	81559590	81560748	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_81559913_81560354
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133016	chr9	+	865	2	NNC	ENSMUSG00000079225.4	novel	638	2	NA	NA	-60	18	at_least_one_novel_splicesite	FALSE	canonical	3	2674	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAAGGACTGAGTCTGTA	NA	False	NA	NA	False	NA	NA	NA	81559590	81560748	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_81560062_81560354
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133018	chr9	+	1117	2	NNC	ENSMUSG00000079225.4	novel	638	2	NA	NA	-60	18	intron_retention	FALSE	canonical	3	1420	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAAGGACTGAGTCTGTA	NA	False	NA	NA	False	NA	NA	NA	81559590	81560748	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_81560470_81560510
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133042	chr9	-	581	2	Antisense	novelGene_ENSMUSG00000058838.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAGTTAGGATTCTGAC	NA	False	NA	NA	False	NA	NA	NA	83292230	83291191	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr9_-_83291216_83291673
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133044	chr9	-	589	2	Antisense	novelGene_ENSMUSG00000058838.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAGTTAGGATTCTGAC	NA	False	NA	NA	False	NA	NA	NA	83292230	83291191	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr9_-_83291224_83291673
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133051	chr9	+	510	2	Genic_Genomic	ENSMUSG00000058838.10	novel	467	1	NA	NA	-42	51	multi-exon	FALSE	canonical	3	305	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTATTACATTATTATT	NA	False	NA	NA	False	AATAAA	-29	NA	83291670	83292230	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr9_+_83291852_83291901
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133083	chr9	+	899	1	FSM	ENSMUSG00000099927.2	ENSMUST00000190511.2	798	1	-33	-68	-33	68	mono-exon	FALSE	NA	NA	NA	NA	NA	1681	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCCTTGGGTGGAGACA	NA	False	NA	NA	False	CATAAA	-39	NA	84306003	84306902	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_84306000_84306900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133094	chr9	-	1790	10	FSM	ENSMUSG00000032415.15	ENSMUST00000034986.14	1790	10	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_5	4.12160822022031	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTCTTTTGTTCTTTAT	NA	False	NA	0	True	ATTAAA	-26	NA	86347003	86189358	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_86189930_86254393_86254533_86304893_86305058_86307314_86307424_86309420_86309491_86317336_86317407_86322638_86322808_86330815_86330907_86333866_86334064_86346793
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133097	chr9	-	2077	13	FSM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	-35	624	-20	0	multi-exon	FALSE	canonical	3	372	junction_7	43.7311070317483	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTTTCGATTGCTTACC	NA	False	NA	-2	True	ATTAAA	-20	NA	86453915	86437053	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133124	chr9	+	856	1	ISM	ENSMUSG00000033491.14	ENSMUST00000036426.13	3444	2	13939	0	13939	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTACTGTGTTTGTATA	NA	False	NA	4	True	AATAAA	-19	NA	86639640	86640496	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_86639600_86640500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133140	chr9	+	583	1	FSM	ENSMUSG00000066443.6	ENSMUST00000155008.2	481	1	-38	-64	-38	64	mono-exon	FALSE	NA	NA	NA	NA	NA	2189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAGCTACACTGTTGTA	NA	False	NA	NA	False	NA	NA	NA	88272851	88273434	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_88272900_88273400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133150	chr9	-	354	1	NIC	ENSMUSG00000092541.8	novel	889	9	NA	NA	2208	-33311	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTCTAAGTAGATTTTT	NA	False	NA	-3	True	AATAAA	-26	NA	88336346	88335992	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_88336000_88336300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133155	chr9	-	947	1	NIC	ENSMUSG00000092541.8	novel	889	9	NA	NA	-23	-34949	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTTACAATTCGTTTT	NA	False	NA	NA	False	AATAAA	-34	NA	88338577	88337630	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_88337600_88338600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133176	chr9	-	1338	4	FSM	ENSMUSG00000097195.11	ENSMUST00000190033.4	1408	4	72	-2	0	0	multi-exon	FALSE	canonical	3	405	junction_2	320.936476926856	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTCAATTCTTTTTGTG	NA	False	NA	-7	True	AATAAA	-40	NA	88404944	88403102	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_88403502_88403702_88403770_88403970_88404435_88404536
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133184	chr9	-	668	5	NNC	ENSMUSG00000097195.11	novel	826	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	474.860176788915	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTCAATTCTTTTTGT	NA	False	NA	-8	True	AATAAA	-39	NA	88404944	88403103	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_88403502_88403970_88404029_88404359_88404435_88404536_88404633_88404903
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133191	chr9	-	672	5	NNC	ENSMUSG00000097195.11	novel	939	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	469.34069448536	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404944	88403104	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_88403496_88403966_88404029_88404359_88404435_88404536_88404640_88404903
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133192	chr9	-	1000	5	NNC	ENSMUSG00000097195.11	novel	809	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	487.826301053971	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404941	88403104	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_88403496_88403698_88403770_88403970_88404029_88404359_88404435_88404536
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133193	chr9	-	932	4	NNC	ENSMUSG00000097195.11	novel	809	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	535.528606975285	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404944	88403104	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_88403496_88403970_88404029_88404359_88404435_88404536
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133208	chr9	-	693	6	NNC	ENSMUSG00000097195.11	novel	809	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_5	420.463268312465	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404944	88403104	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536_88404592_88404903
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133211	chr9	-	671	5	NNC	ENSMUSG00000097195.11	novel	809	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	480.860166784482	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404944	88403104	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_88403502_88403970_88404029_88404359_88404435_88404536_88404633_88404899
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133213	chr9	-	676	5	NNC	ENSMUSG00000097195.11	novel	809	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	424.583545960038	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404944	88403104	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_88403502_88403970_88404029_88404357_88404435_88404536_88404640_88404903
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133215	chr9	-	716	5	NIC	ENSMUSG00000097195.11	novel	809	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	468.898976326458	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404944	88403104	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_88403502_88403970_88404029_88404359_88404435_88404536_88404682_88404903
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133221	chr9	-	1437	3	FSM	ENSMUSG00000097195.11	ENSMUST00000239344.2	1437	3	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_2	214.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404943	88403104	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_88403502_88403702_88403770_88403970
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133222	chr9	-	1537	3	FSM	ENSMUSG00000097195.11	ENSMUST00000239278.2	1534	3	-3	0	0	0	multi-exon	FALSE	canonical	3	834	junction_1	178	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404944	88403104	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_88403502_88403702_88404435_88404536
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133223	chr9	-	1007	5	NNC	ENSMUSG00000097195.11	novel	809	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	447.401036543278	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404944	88403104	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_88403502_88403702_88403770_88403970_88404029_88404357_88404435_88404536
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133226	chr9	-	734	6	NNC	ENSMUSG00000097195.11	novel	809	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	436.033668424813	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404944	88403104	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536_88404633_88404903
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133228	chr9	-	940	4	NNC	ENSMUSG00000097195.11	novel	809	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	489.904979448963	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404944	88403104	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_88403502_88403970_88404029_88404357_88404435_88404536
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133231	chr9	-	740	6	NNC	ENSMUSG00000097195.11	novel	826	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	400.241726960096	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404941	88403104	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_88403502_88403702_88403770_88403970_88404029_88404357_88404435_88404536_88404640_88404903
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133232	chr9	-	999	5	NNC	ENSMUSG00000097195.11	novel	809	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	487.826301053971	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404944	88403104	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_88403502_88403708_88403770_88403970_88404029_88404359_88404435_88404536
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133271	chr9	-	1472	3	NNC	ENSMUSG00000097195.11	novel	1534	3	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	595	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404941	88403104	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_88403736_88403998_88404435_88404536
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133272	chr9	-	1577	2	NNC	ENSMUSG00000097195.11	novel	947	4	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	0	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404944	88403104	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_88403736_88403998
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133279	chr9	-	1534	3	FSM	ENSMUSG00000097195.11	ENSMUST00000239284.2	1533	3	2	-3	0	0	multi-exon	FALSE	canonical	3	405	junction_1	392.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404941	88403104	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_88403770_88403970_88404435_88404536
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133314	chr9	-	735	3	NNC	ENSMUSG00000079427.11	novel	801	3	NA	NA	-5	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	263.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGAAATCAATAGAAATT	NA	False	NA	NA	False	AATAAA	-17	NA	88601628	88570657	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_88571039_88597540_88597803_88601536
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133315	chr9	-	526	2	NIC	ENSMUSG00000079427.11	novel	801	3	NA	NA	10	1	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGAAATCAATAGAAATT	NA	False	NA	NA	False	AATAAA	-17	NA	88601856	88570657	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_88571039_88601711
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133350	chr9	+	1097	5	Antisense	novelGene_ENSMUSG00000100602.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	16.976086121365	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTCACATACATAGCAT	NA	False	NA	NA	False	AATAAA	-22	NA	88949022	88958332	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr9_+_88949127_88949384_88949440_88949528_88949604_88957243_88957340_88957565
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133399	chr9	-	1582	10	NIC	ENSMUSG00000062270.15	novel	1824	12	NA	NA	8	2	combination_of_known_junctions	FALSE	canonical	3	30	junction_9	2189.3605357628	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTGTGTGGCCGTGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	89996704	89973721	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89996588
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133424	chr9	+	2235	1	FSM	ENSMUSG00000096647.3	ENSMUST00000178436.3	871	1	-55	-1309	-55	1309	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTATTTTCATTTATACG	NA	False	NA	NA	False	AATACA	-25	NA	90000934	90003169	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_90000900_90003200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133449	chr9	-	340	1	ISM	ENSMUSG00000032407.15	ENSMUST00000079659.12	7630	28	51156	3501	21506	579	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTTTTCAGGCAATTTTAA	NA	False	NA	-18	True	AATAAA	-16	NA	95342791	95342451	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_95342500_95342800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133477	chr9	+	1758	9	NNC	ENSMUSG00000015354.9	novel	4438	9	NA	NA	138	867	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	102.509755633305	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGCAGCCAGATAACCTT	8513	False	NA	NA	False	AATAAA	-17	NA	95519791	95577603	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563727_95568738_95568894_95574913_95574998_95576676_95576845_95577018
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133514	chr9	-	1149	3	NNC	ENSMUSG00000051234.7	novel	1232	3	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	552.5	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTCTTTATTTGGCGGT	3790	False	NA	0	True	ATTAAA	-35	NA	96360651	96352989	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_96353906_96356016_96356059_96360460
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133526	chr9	-	600	1	ISM	ENSMUSG00000032413.13	ENSMUST00000034984.8	5813	24	89813	1905	3375	1100	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGTCTATTTCCATATG	NA	False	NA	NA	False	ATTAAA	-28	NA	96423857	96423257	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_96423300_96423900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133547	chr9	+	776	1	FSM	ENSMUSG00000062933.8	ENSMUST00000075723.7	490	1	-56	-230	-56	230	mono-exon	FALSE	NA	NA	NA	NA	NA	3426	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGACACAAACACCACCCT	NA	False	NA	NA	False	NA	NA	NA	96777654	96778430	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_96777700_96778400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133578	chr9	+	257	1	NIC	ENSMUSG00000046402.11	novel	2652	4	NA	NA	23334	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGTGTTTTGGAGGAAT	NA	False	NA	17	True	AATAAA	-18	NA	98328347	98328604	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_98328300_98328600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133735	chr9	+	631	3	FSM	ENSMUSG00000035048.14	ENSMUST00000190279.7	589	3	-41	-1	-41	1	multi-exon	TRUE	canonical	3	1105	junction_1	209.5	7403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCTTCTGTCAAAGTT	NA	False	NA	NA	False	ATTAAA	-19	NA	102503453	102511625	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_102503546_102506961_102507088_102511212
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133751	chr9	+	742	3	FSM	ENSMUSG00000035048.14	ENSMUST00000188398.7	727	3	-21	6	7	2	multi-exon	FALSE	canonical	3	126	junction_1	699	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCACTTGGTTTTCGTTT	NA	False	NA	19	True	AATAAA	-19	NA	102503501	102511443	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_102503887_102506961_102507088_102511212
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133763	chr9	+	237	1	NIC	ENSMUSG00000035048.14	novel	589	3	NA	NA	5496	2	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCACTTGGTTTTCGTTT	5124	False	NA	19	True	AATAAA	-19	NA	102511206	102511443	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_102511200_102511400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133767	chr9	+	179	1	Intergenic	novelGene_461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTCTTTCTAAGAAT	NA	False	NA	NA	False	NA	NA	NA	102675230	102675409	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr9_+_102675200_102675400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133788	chr9	-	1757	8	NNC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	0	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	97.1596624119289	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTGAGTCAAATGATGAG	NA	False	NA	3	True	TATAAA	-34	NA	103079328	103066285	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_103066696_103066939_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133793	chr9	-	449	1	ISM	ENSMUSG00000032553.15	ENSMUST00000035157.10	3064	7	12602	1055	2777	3	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTGAGTCAAATGATGAG	NA	False	NA	3	True	TATAAA	-34	NA	103066734	103066285	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_103066300_103066700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133797	chr9	-	1700	8	NNC	ENSMUSG00000032553.15	novel	3166	6	NA	NA	0	-57	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	123.958353770078	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGTTCTCATTGCTT	NA	False	NA	-1	True	TTTAAA	-35	NA	103079328	103066345	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_103066653_103066892_103067621_103068267_103068323_103069411_103069549_103074736_103074812_103075980_103076066_103078485_103078581_103079110
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133809	chr9	+	2253	12	ISM	ENSMUSG00000032555.11	ENSMUST00000035164.10	5224	28	28838	0	1324	0	3prime_fragment	FALSE	canonical	3	578	junction_1	51.941002768478	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	2362	False	NA	14	True	AATAAA	-19	NA	103211251	103227627	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133817	chr9	-	2174	1	ISM	ENSMUSG00000032803.16	ENSMUST00000035484.11	3387	5	10573	0	9630	0	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATGCTTTCTGTTGAAA	NA	False	NA	2	True	AATAAA	-24	NA	103232466	103230292	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_103230300_103232500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133833	chr9	+	1652	10	FSM	ENSMUSG00000032563.17	ENSMUST00000035177.15	3972	10	0	2320	0	84	multi-exon	FALSE	canonical	3	494	junction_1	31.6489229040682	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGGAGGACTTTTTTAA	NA	False	NA	122	True	AATATA	-28	NA	104930437	104954767	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_104930712_104931619_104931805_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360_104952439_104954191
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133836	chr9	+	1515	10	NIC	ENSMUSG00000032563.17	novel	3972	10	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	174.559127200181	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGGTTGTGAAACAGAA	NA	False	NA	18	True	ATTAAA	-15	NA	104930466	104954663	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_104930712_104931623_104931805_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360_104952439_104954191
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133860	chr9	+	1572	9	NNC	ENSMUSG00000023277.14	novel	1596	9	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	112.752979450656	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGAGCCTGGGTGCCTTT	NA	False	NA	19	True	AATAAA	-16	NA	106080324	106092588	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_106080484_106084087_106084166_106088917_106089097_106089454_106089545_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133890	chr9	+	215	1	NIC	ENSMUSG00000023345.18	novel	2337	11	NA	NA	21950	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTGGGATTGGGTGC	2557	False	NA	22	True	AATAAA	-34	NA	106226876	106227091	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_106226900_106227100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133914	chr9	+	689	4	NNC	ENSMUSG00000048758.15	novel	733	4	NA	NA	-6	0	intron_retention	FALSE	canonical	2	14	junction_1	2179.05060876418	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTCTGTTGTCATAG	NA	False	NA	3	True	AATAAA	-19	NA	106306730	106308767	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_106306810_106307168_106307214_106307506_106307572_106308267
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133918	chr9	+	1049	3	FSM	ENSMUSG00000048758.15	ENSMUST00000213448.2	845	3	-23	-181	-6	1	multi-exon	FALSE	canonical	3	3966	junction_1	565.5	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTCTGTTGTCATAGG	NA	False	NA	4	True	AATAAA	-20	NA	106306730	106308768	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_106307214_106307506_106307572_106308267
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133943	chr9	-	257	1	NIC	ENSMUSG00000023262.14	novel	1467	14	NA	NA	1917	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTTAATACTGTGGACA	3895	False	NA	-16	True	AATAAA	-18	NA	106310445	106310188	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_106310200_106310400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133959	chr9	+	1480	4	FSM	ENSMUSG00000042073.16	ENSMUST00000048527.15	1745	4	265	0	-13	0	multi-exon	FALSE	canonical	1	1	junction_1	1.4142135623731	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTTTTGCTGTCTCCGG	NA	False	NA	13	True	AATAAA	-20	NA	106325838	106330122	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_106325909_106327202_106327431_106328591_106328834_106329182
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133962	chr9	+	2053	13	FSM	ENSMUSG00000023495.14	ENSMUST00000024260.14	2035	13	-18	0	-18	0	multi-exon	FALSE	canonical	3	316	junction_11	32.902212016148	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGCAGTAATACTAGTG	1582	False	NA	27	True	AATAAA	-20	NA	106331022	106341211	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_106331207_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000133977	chr9	+	1596	15	NNC	ENSMUSG00000041506.16	novel	1586	15	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	353.116222123157	66	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCCTTGTTCCTCTGGT	NA	False	NA	21	True	ATTAAA	-21	NA	106354452	106362621	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358420_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134002	chr9	+	176	1	NIC	ENSMUSG00000041506.16	novel	1586	15	NA	NA	785	0	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTGTTCCTCTGGTTT	NA	False	NA	23	True	ATTAAA	-23	NA	106362447	106362623	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_106362400_106362600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134024	chr9	-	631	5	NIC	ENSMUSG00000032575.17	novel	357	3	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	394.142344210819	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAGGGAAAATGATCAATT	NA	False	NA	NA	False	AATAAA	-40	NA	106769139	106746396	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_106746561_106747401_106747472_106767359_106767502_106768269_106768398_106769012
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134062	chr9	-	1586	11	FSM	ENSMUSG00000032579.15	ENSMUST00000035196.14	2192	11	0	606	0	2	multi-exon	FALSE	canonical	3	133	junction_9	21.6296093353532	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTATTAACATTCATG	NA	False	NA	-10	True	AATAAA	-14	NA	107215549	107204888	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214199_107214578_107215479
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134072	chr9	-	1577	11	NNC	ENSMUSG00000032579.15	novel	2192	11	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	54.6707417180342	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGCCAGTATTTTGTT	NA	False	NA	-23	True	AATAAA	-1	NA	107215549	107204901	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214199_107214578_107215475
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134073	chr9	-	1308	10	NNC	ENSMUSG00000032579.15	novel	1888	10	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	57.3643327047972	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGCCAGTATTTTGTT	NA	False	NA	-23	True	AATAAA	-1	NA	107215531	107204901	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213994_107215479
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134100	chr9	+	1445	11	FSM	ENSMUSG00000010057.9	ENSMUST00000010201.9	1441	11	-4	0	-4	0	multi-exon	FALSE	canonical	3	98	junction_4	11.6721891691319	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGAGTACTGCTTCAGCC	NA	False	NA	13	True	AATAAA	-24	NA	107419420	107422905	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_107419653_107420180_107420273_107420366_107420536_107420705_107420815_107421349_107421487_107421578_107421677_107421796_107421834_107421945_107422040_107422112_107422231_107422443_107422587_107422689
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134139	chr9	-	562	1	ISM	ENSMUSG00000032562.14	ENSMUST00000192615.6	1777	9	20626	0	1361	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTGTTCTTTTCTCCT	NA	False	NA	0	True	AATAAA	-24	NA	107491885	107491323	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_107491300_107491900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134141	chr9	-	1601	9	FSM	ENSMUSG00000032562.14	ENSMUST00000192615.6	1777	9	176	0	176	0	multi-exon	FALSE	canonical	3	246	junction_1	364.681860496241	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTGTTCTTTTCTCCT	5001	False	NA	0	True	AATAAA	-24	NA	107512335	107491323	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_107491915_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134144	chr9	-	1984	9	FSM	ENSMUSG00000032562.14	ENSMUST00000055704.12	2215	9	231	0	176	0	multi-exon	FALSE	canonical	3	1026	junction_1	123.439193026364	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTGTTCTTTTCTCCT	5001	False	NA	0	True	AATAAA	-24	NA	107512335	107491323	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_107492298_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134183	chr9	+	440	1	ISM	ENSMUSG00000032594.12	ENSMUST00000035214.11	4559	6	45842	0	3480	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCAAGTCTGTGTGA	NA	False	NA	17	True	AATAAA	-17	NA	107925541	107925981	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_107925500_107926000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134188	chr9	+	1469	10	FSM	ENSMUSG00000070284.11	ENSMUST00000047947.9	1429	10	-40	0	-4	0	multi-exon	FALSE	canonical	3	24	junction_1	31.8309578326385	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGACTGGAAGTCAAGC	NA	False	NA	29	True	NA	NA	NA	107926483	107928901	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_107926620_107926710_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134190	chr9	+	1440	10	NNC	ENSMUSG00000070284.11	novel	1429	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	37.1167660362221	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGACTGGAAGTCAAGC	NA	False	NA	29	True	NA	NA	NA	107926486	107928901	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_107926594_107926710_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134195	chr9	+	1626	10	NIC	ENSMUSG00000070284.11	novel	1429	10	NA	NA	1	7	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	34.1655374700484	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTTGTTCATCAGGT	NA	False	NA	17	True	NA	NA	NA	107926488	107929122	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_107926561_107926710_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134210	chr9	-	2397	22	FSM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	125	-4	-2	4	multi-exon	FALSE	canonical	3	126	junction_21	23.0064567492301	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGCTGGTACTTTGTA	NA	False	NA	-28	True	AATAAA	-18	NA	107971680	107962607	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107970820_107970948_107971425_107971559_107971633
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134219	chr9	-	752	1	ISM	ENSMUSG00000039952.16	ENSMUST00000191899.6	5662	4	58343	230	58094	-230	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGCCTCTGACTGTCTA	536	False	NA	67	True	AATAAA	-22	NA	108082814	108082062	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_108082100_108082800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134228	chr9	+	2093	9	FSM	ENSMUSG00000032607.13	ENSMUST00000035230.7	2082	9	-11	0	6	0	multi-exon	TRUE	canonical	3	166	junction_5	15.4029218007494	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCTCTAGCTTCCTTG	NA	False	NA	21	True	AATAAA	-22	NA	108174057	108179501	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_108174225_108174326_108174495_108174910_108174992_108175966_108176099_108176578_108176658_108176943_108177090_108177732_108177914_108178271_108178428_108178518
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134240	chr9	+	1986	6	FSM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	220	-9	-90	9	multi-exon	FALSE	canonical	3	1457	junction_4	47.4535562418666	1867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGTGTGTTGCTTTC	NA	False	NA	24	True	AATAAA	-24	NA	108183547	108215142	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_108183753_108192506_108192582_108204782_108204941_108208069_108208191_108212249_108212381_108213846
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134258	chr9	+	1298	1	Genic_Genomic	ENSMUSG00000007815.14	novel	NA	NA	NA	NA	6086	9	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGTGTGTTGCTTTC	NA	False	NA	24	True	AATAAA	-24	NA	108213844	108215142	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr9_+_108213800_108215100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134283	chr9	+	827	2	NNC	ENSMUSG00000063856.9	novel	653	3	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTGTGTCCTGTGTC	NA	False	NA	17	True	AATAAA	-17	NA	108216474	108217541	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_108216736_108216975
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134296	chr9	+	670	2	NNC	ENSMUSG00000032612.15	novel	725	6	NA	NA	104	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGTTGTCCTCTAGTT	4101	False	NA	13	True	AGTAAA	-17	NA	108268178	108269461	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_108268265_108268877
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134302	chr9	-	735	3	NNC	ENSMUSG00000047220.6	novel	2890	7	NA	NA	-3360	-17356	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTAGTTTATTCATGACT	NA	False	NA	NA	False	NA	NA	NA	108309043	108298165	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_108298761_108305614_108305682_108308970
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134348	chr9	+	1663	14	NNC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-9	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	713.574052915381	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAACTGATCTTTGAGT	1170	False	NA	25	True	AATAAA	-18	NA	108437659	108442772	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440070_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134351	chr9	+	1741	15	NNC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-9	4	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_8	975.948897227719	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAACTGATCTTTGAGT	1170	False	NA	25	True	AATAAA	-18	NA	108437659	108442772	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440797_108440891_108441111_108441184_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134370	chr9	-	1492	5	FSM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	-2	-3	-2	3	multi-exon	FALSE	canonical	3	428	junction_3	47.1301389770919	1368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGATCTGTTTTCAGAA	8141	False	NA	NA	False	NA	NA	NA	108444635	108442732	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_108443275_108443357_108443459_108443539_108443607_108443754_108443951_108444049
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134405	chr9	-	485	1	FSM	ENSMUSG00000064145.13	ENSMUST00000193923.2	3664	1	1456	1723	1456	16	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTTGACTTAGAATGTA	8181	False	NA	-8	True	AATAAA	-27	NA	108482353	108481868	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_108481900_108482400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134415	chr9	+	202	1	Intergenic	novelGene_462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTGGGGATTAGCTTGT	5658	False	NA	NA	False	NA	NA	NA	108575613	108575815	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr9_+_108575600_108575800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134417	chr9	+	2641	1	Genic_Genomic	ENSMUSG00000032601.14	novel	NA	NA	NA	NA	-443	6	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTGTCTCCTGTTGTA	NA	False	NA	26	True	AATAAA	-26	NA	108625000	108627641	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr9_+_108625000_108627600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134440	chr9	+	1641	13	FSM	ENSMUSG00000025651.15	ENSMUST00000026743.14	1653	13	33	-21	33	21	multi-exon	FALSE	canonical	3	5755	junction_3	194.83802033142	5779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCATGGAGTCCATTGGG	NA	False	NA	39	True	AATAAA	-35	NA	108765733	108778712	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134469	chr9	+	1582	13	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1708.89425547308	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCCTTCCTTAGA	NA	False	NA	18	True	AATAAA	-14	NA	108765768	108778691	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774430_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134510	chr9	+	964	1	ISM	ENSMUSG00000025647.17	ENSMUST00000112059.10	1910	6	18196	53	821	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTTTCTTCAGCGCCT	NA	False	NA	18	True	AATAAA	-18	NA	108885828	108886792	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_108885800_108886800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134521	chr9	-	801	4	FSM	ENSMUSG00000091537.3	ENSMUST00000167504.3	944	4	145	-2	-64	2	multi-exon	FALSE	canonical	3	4656	junction_3	487.196743284134	13540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGGGTTGCCATGCTTGTG	NA	False	NA	NA	False	AATAAA	-23	NA	108911510	108906952	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_108907494_108911069_108911158_108911238_108911295_108911394
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134533	chr9	-	639	4	NNC	ENSMUSG00000091537.3	novel	944	4	NA	NA	-7	-99	at_least_one_novel_splicesite	FALSE	canonical	3	392	junction_2	2341.19214646442	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTGTGTGTGCTTGTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	108911453	108907053	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_108907494_108911069_108911154_108911238_108911295_108911394
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134536	chr9	-	586	3	FSM	ENSMUSG00000091537.3	ENSMUST00000193868.2	380	3	-6	-200	-6	-99	multi-exon	FALSE	canonical	3	59	junction_2	2893	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTGTGTGTGCTTGTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	108911452	108907053	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_108907494_108911069_108911158_108911394
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134547	chr9	-	441	1	NIC	ENSMUSG00000091537.3	novel	944	4	NA	NA	3939	-99	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTGTGTGTGCTTGTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	108907494	108907053	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_108907100_108907500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134644	chr9	+	1379	1	ISM	ENSMUSG00000032479.16	ENSMUST00000035055.15	6091	19	151112	5	2772	3	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTTGCTTCTGTCCT	NA	False	NA	20	True	AATAAA	-20	NA	109911639	109913018	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_109911600_109913000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134664	chr9	+	334	1	ISM	ENSMUSG00000032482.10	ENSMUST00000196060.5	3790	5	18460	0	16178	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTAGTGCCGTGGCCT	8667	False	NA	20	True	AATAAA	-21	NA	110091310	110091644	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_110091300_110091600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134689	chr9	-	139	1	Genic_Genomic	ENSMUSG00000032491.15	novel	NA	NA	NA	NA	2053	4	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTCCTTGGACCTGTA	8903	False	NA	-1	True	ATTAAA	-29	NA	110450337	110450198	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chr9_-_110450200_110450300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134702	chr9	+	875	7	FSM	ENSMUSG00000019659.9	ENSMUST00000019803.9	834	7	-33	-8	-33	8	multi-exon	FALSE	canonical	3	695	junction_3	22.4258035902098	2369	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTCTGGATTTGAACTC	8449	False	NA	37	True	AATAAA	-37	NA	110485537	110540682	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_110485727_110521383_110521452_110537513_110537594_110538961_110539024_110539194_110539230_110540153_110540231_110540318
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134762	chr9	-	1769	5	NIC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_3	2037.2819361836	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775165	110768670	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_110769888_110771396_110771507_110771597_110771713_110773258_110773312_110774891
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134779	chr9	+	1815	9	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-628	-1816	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	94.0634759085587	53	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGTATACTGTTTATTT	NA	False	NA	NA	False	AAAAAG	-7	NA	110782238	110811318	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_110782345_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134804	chr9	-	988	4	NNC	ENSMUSG00000066319.7	novel	703	3	NA	NA	96	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	5.79271573232759	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTCTTTCCTTTGAT	NA	False	NA	NA	False	NA	NA	NA	110819555	110814002	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_110814212_110816134_110816383_110818512_110818732_110819243
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134817	chr9	-	666	4	NNC	ENSMUSG00000032498.10	novel	603	3	NA	NA	-27	12	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	176.114230606792	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTATATAACCGCACATT	2781	False	NA	-15	True	AATAAA	-27	NA	111060043	111057310	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_111057695_111058907_111059022_111059310_111059400_111059964
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134855	chr9	+	187	3	ISM	ENSMUSG00000009741.16	ENSMUST00000216558.2	1623	16	41198	-55	3627	55	3prime_fragment	FALSE	canonical	3	381	junction_1	24	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAAGACTGAATCCAAGA	8567	False	NA	NA	False	AATAAA	-17	NA	113801919	113804506	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_113801962_113802586_113802639_113804413
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134977	chr9	-	249	1	NIC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	66374	-1218	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTTTCTGATGTGTAA	NA	False	NA	-2	True	ATTAAA	-16	NA	115073115	115072866	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_-_115072900_115073100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134991	chr9	-	1744	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	-36	-539	-36	539	multi-exon	TRUE	canonical	3	173	junction_1	9.03081145609604	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGCTACTGTCGGTTG	NA	False	NA	NA	False	AATAAA	-18	NA	117979281	117893050	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000134996	chr9	-	262	1	ISM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	84829	565	84815	8	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTGATTTATTAAATATG	NA	False	NA	1	True	AATAAA	-21	NA	117894416	117894154	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_117894200_117894400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135004	chr9	-	640	5	NNC	ENSMUSG00000039163.11	novel	1169	4	NA	NA	98	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	92.8072599530877	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGAGTTCTGATTTATT	NA	False	NA	-6	True	AATAAA	-14	NA	117979133	117894161	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_117894417_117897741_117897897_117904189_117904281_117944407_117944498_117979084
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135032	chr9	-	1311	7	NNC	ENSMUSG00000092212.4	novel	1458	6	NA	NA	7942	0	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_2	1.89296944860009	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTTGTACTGTCTACT	NA	False	NA	NA	False	NA	NA	NA	119052816	119049553	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_-_119049990_119050186_119050403_119051512_119051622_119051804_119052020_119052238_119052334_119052418_119052540_119052697
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135039	chr9	+	191	1	Intergenic	novelGene_463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTAGTTTGGGCTGGAG	1262	False	NA	NA	False	NA	NA	NA	119103758	119103949	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chr9_+_119103800_119103900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135041	chr9	-	1943	6	FSM	ENSMUSG00000032508.9	ENSMUST00000035092.7	1960	6	17	0	17	0	multi-exon	FALSE	canonical	3	36	junction_3	6.61513416341649	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGACTGACGGTATGTG	NA	False	NA	1	True	AATAAA	-26	NA	119169090	119164999	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_119165966_119166400_119166577_119166819_119166912_119167071_119167253_119167641_119167777_119168697
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135047	chr9	+	345	1	NIC	ENSMUSG00000036138.17	novel	1762	12	NA	NA	1450	0	mono-exon	FALSE	NA	NA	NA	NA	NA	404	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGTCATTTCCTTCA	NA	False	NA	28	True	AGTAAA	-19	NA	119179020	119179365	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_119179000_119179400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135052	chr9	+	504	1	ISM	ENSMUSG00000035769.10	ENSMUST00000216838.2	3702	20	35243	464	14639	4	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACCTCTCCTTGCTTCCC	NA	False	NA	24	True	AATAAA	-24	NA	119221895	119222399	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_119221900_119222400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135065	chr9	-	2562	9	FSM	ENSMUSG00000032513.9	ENSMUST00000035099.9	3906	9	13	1331	-2	-1331	multi-exon	FALSE	canonical	3	103	junction_5	11.0898320546346	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGTAACTAAAGCTTT	NA	False	NA	0	True	AATAAA	-19	NA	119766618	119755653	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_119757103_119757292_119757446_119757878_119758030_119758616_119758828_119759038_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135124	chr9	+	1020	7	NNC	ENSMUSG00000032518.7	novel	1938	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1834.17469330365	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATGGTCCTCACTGCAG	NA	False	NA	5	True	AATAAA	-15	NA	119956852	119960625	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_119956897_119957522_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960475
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135154	chr9	+	1027	7	NNC	ENSMUSG00000032518.7	novel	1938	7	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1923.12694588787	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGTCCTCACTGCAGAC	NA	False	NA	7	True	AATAAA	-17	NA	119956853	119960627	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_119956897_119957522_119957689_119958223_119958343_119959183_119959430_119959837_119959963_119960065_119960232_119960465
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135159	chr9	+	1022	7	NNC	ENSMUSG00000032518.7	novel	1101	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2253.10871661553	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATGGTCCTCACTGCAG	NA	False	NA	5	True	AATAAA	-15	NA	119956853	119960625	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_119956897_119957522_119957689_119958223_119958343_119959187_119959430_119959833_119959963_119960065_119960232_119960468
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135257	chr9	+	633	5	NIC	ENSMUSG00000025794.10	novel	1009	6	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	573	junction_2	5946.15987423816	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGTGTGGACTCTAAG	NA	False	NA	19	True	AATAAA	-23	NA	120400571	120403501	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_120400608_120401161_120401264_120402641_120402742_120402829_120402884_120403160
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135270	chr9	+	667	5	NIC	ENSMUSG00000025794.10	novel	1009	6	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	7059.62040410106	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGTGTGGACTCTAAG	NA	False	NA	19	True	AATAAA	-23	NA	120400578	120403501	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_120400608_120401161_120401264_120401833_120401929_120402641_120402742_120403160
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135278	chr9	+	727	6	NNC	ENSMUSG00000025794.10	novel	1009	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6544.36268554853	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGTGTGGACTCTAAG	NA	False	NA	19	True	AATAAA	-23	NA	120400578	120403501	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_120400614_120401161_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135280	chr9	+	721	6	NNC	ENSMUSG00000025794.10	novel	1271	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6544.36268554853	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGTGTGGACTCTAAG	NA	False	NA	19	True	AATAAA	-23	NA	120400578	120403501	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_120400616_120401169_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135293	chr9	+	657	5	NNC	ENSMUSG00000025794.10	novel	1009	6	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	7059.62040410106	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGTGTGGACTCTAAG	NA	False	NA	19	True	AATAAA	-23	NA	120400580	120403501	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_120400608_120401161_120401264_120401833_120401929_120402641_120402742_120403168
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135303	chr9	+	874	6	NIC	ENSMUSG00000025794.10	novel	713	5	NA	NA	180	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	6530.14012100812	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGTGTGGACTCTAAG	NA	False	NA	19	True	AATAAA	-23	NA	120400801	120403501	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_120400984_120401161_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135318	chr9	+	3535	15	FSM	ENSMUSG00000006932.18	ENSMUST00000007130.15	3623	15	88	0	2	0	multi-exon	FALSE	canonical	3	499	junction_2	74.0160283248135	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTCATTTTGTTTGTT	NA	False	NA	27	True	ATTAAA	-16	NA	120762553	120789573	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135322	chr9	+	976	1	FSM	ENSMUSG00000006932.18	ENSMUST00000215573.2	1292	1	325	-9	325	9	mono-exon	FALSE	NA	NA	NA	NA	NA	5337	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGTTTGTCGTGAG	NA	False	NA	36	True	ATTAAA	-25	NA	120788606	120789582	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_120788600_120789600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135332	chr9	-	659	3	FSM	ENSMUSG00000032532.8	ENSMUST00000035120.6	691	3	32	0	-23	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTGTCCAGTGGGAG	NA	False	NA	-1	True	ATTAAA	-22	NA	121324728	121318889	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_121319268_121323382_121323599_121324663
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135409	chr9	+	2025	4	FSM	ENSMUSG00000057895.12	ENSMUST00000051667.14	2010	4	-15	0	-15	0	multi-exon	FALSE	canonical	3	61	junction_1	7.71722460186015	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGTTTTAACTGTAT	4859	False	NA	11	True	AATAAA	-22	NA	122752121	122760093	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_122752284_122754072_122754362_122755374_122755520_122758664
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135414	chr9	-	933	3	FSM	ENSMUSG00000032551.8	ENSMUST00000035154.4	3361	3	-11	2439	-11	7	multi-exon	FALSE	canonical	3	36	junction_2	10	482	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCACTGTTCTGTTGCTG	NA	False	NA	NA	False	ATTAAA	-34	NA	122780076	122776592	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_122777174_122777989_122778135_122779869
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135426	chr9	+	1076	5	ISM	ENSMUSG00000036768.7	ENSMUST00000216062.2	669	6	2289	-504	228	0	3prime_fragment	FALSE	canonical	3	211	junction_3	21.7944947177034	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAAATACTATGCCT	NA	False	NA	8	True	AATAAA	-18	NA	122843003	122847798	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_+_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135435	chr9	-	1215	1	ISM	ENSMUSG00000025786.18	ENSMUST00000147563.9	6987	7	37848	1833	24992	-1833	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTTGTGAGTCTGTGC	NA	False	NA	0	True	AATACA	-27	NA	122904422	122903207	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_122903200_122904400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135442	chr9	+	1067	8	FSM	ENSMUSG00000025785.6	ENSMUST00000026891.5	1053	8	-10	-4	-10	4	multi-exon	FALSE	canonical	3	1140	junction_3	103.377058995362	1483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTAGCATCTCCAGCT	NA	False	NA	19	True	AATAAA	-24	NA	122942269	122965198	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_+_122942388_122947955_122948058_122948305_122948401_122956870_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964963
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135459	chr9	+	824	6	NIC	ENSMUSG00000025785.6	novel	1053	8	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	30	junction_1	531.612038990841	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGTGTTGTTAGCATCT	NA	False	NA	13	True	AATAAA	-18	NA	122942309	122965192	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_122942388_122956870_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964963
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135460	chr9	+	660	5	NIC	ENSMUSG00000025785.6	novel	1053	8	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	597.093533292733	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTGTTAGCATCTCC	NA	False	NA	15	True	AATAAA	-20	NA	122942309	122965194	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_122942388_122959588_122959660_122959891_122960016_122960949_122961106_122964963
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135468	chr9	+	1029	8	NNC	ENSMUSG00000025785.6	novel	1053	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	463.237982651929	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTGTTAGCATCTCC	NA	False	NA	15	True	AATAAA	-20	NA	122942309	122965194	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chr9_+_122942394_122947955_122948058_122948305_122948401_122956870_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964963
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135481	chr9	+	233	1	NIC	ENSMUSG00000025785.6	novel	1053	8	NA	NA	8452	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTGTTAGCATCTCC	NA	False	NA	15	True	AATAAA	-20	NA	122964961	122965194	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chr9_+_122965000_122965200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135508	chr9	-	530	4	FSM	ENSMUSG00000110834.2	ENSMUST00000214845.2	461	4	-57	-12	-57	12	multi-exon	FALSE	canonical	3	27	junction_1	43.70608907489	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTACTGGAATGTGAAAA	NA	False	NA	NA	False	NA	NA	NA	124044826	124032975	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chr9_-_124033196_124033755_124033817_124033999_124034127_124044704
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135510	chr9	-	591	3	ISM	ENSMUSG00000110834.2	ENSMUST00000214845.2	461	4	-190	620	-190	-620	5prime_fragment	FALSE	canonical	3	93	junction_2	20	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGGTGTCTGATTTGTG	NA	False	NA	NA	False	NA	NA	NA	124044959	124033607	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chr9_-_124033817_124033999_124034127_124044704
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135520	chr9	-	936	2	Antisense	novelGene_ENSMUSG00000093803.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	70	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGCCCGGGCGCAGGC	NA	False	NA	NA	False	NA	NA	NA	124198160	124195473	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chr9_-_124196190_124197940
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135545	chrM	+	1028	1	FSM	ENSMUSG00000064341.1	ENSMUST00000082392.1	957	1	-66	-5	-66	5	mono-exon	FALSE	NA	NA	NA	NA	NA	351	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCTGATAAAAGAATTACT	261	False	NA	-12	True	NA	NA	NA	2684	3712	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrM_+_2700_3700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135555	chrM	+	691	1	FSM	ENSMUSG00000064354.1	ENSMUST00000082405.1	684	1	-2	-5	-2	5	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGAAGCTAAGAGCGTTA	-3	True	NA	NA	False	ACTAAA	-40	NA	7010	7701	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrM_+_7000_7700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135563	chrM	+	1669	1	FSM	ENSMUSG00000064363.1	ENSMUST00000082414.1	1378	1	-291	0	-291	0	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAATATAGTTTACAAAAA	-2	True	NA	13	True	NA	NA	NA	9875	11544	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrM_+_9900_11500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135596	chrUn_MU069435v1	+	320	4	Intergenic	novelGene_464	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	60	junction_1	126.053780409615	366	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGCAGTTGTAGGACACA	NA	False	NA	NA	False	NA	NA	NA	0	7364	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrUn_MU069435v1_+_73_3311_3351_3591_3670_7233
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135616	chrUn_MU069435v1	+	322	2	Intergenic	novelGene_465	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	54	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTAGCAGTTGTAGGACA	NA	False	NA	NA	False	NA	NA	NA	4601	7362	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrUn_MU069435v1_+_4795_7233
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135624	chrUn_MU069435v1	+	268	1	Intergenic	novelGene_466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCAGCTATTTATTTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	7364	7632	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrUn_MU069435v1_+_7400_7600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135629	chrUn_MU069435v1	+	522	2	Intergenic	novelGene_467	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_1	0	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGCTATTTATTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	14031	15290	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrUn_MU069435v1_+_14170_14906
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135636	chrUn_MU069435v1	+	391	1	Intergenic	novelGene_468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGCTATTTATTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	14899	15290	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrUn_MU069435v1_+_14900_15300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135655	chrX	-	755	1	Intergenic	novelGene_469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAAAAGAAGAAAGATCAA	NA	False	NA	NA	False	NA	NA	NA	4366878	4366123	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrX_-_4366100_4366900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135659	chrX	+	1813	2	FSM	ENSMUSG00000073295.5	ENSMUST00000103007.4	3036	2	864	359	864	-359	multi-exon	FALSE	canonical	3	23	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTAGAAGTTACTTGGA	NA	False	NA	14	True	NA	NA	NA	5960370	5966805	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_5960459_5965080
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135686	chrX	-	434	1	ISM	ENSMUSG00000063018.7	ENSMUST00000154346.2	874	2	8553	282	293	4	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGCTTATTATTCTT	NA	False	NA	-24	True	NA	NA	NA	7278771	7278337	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_-_7278300_7278800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135715	chrX	-	491	1	Genic_Genomic	ENSMUSG00000031146.7	novel	NA	NA	NA	NA	2886	4	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTAACTTTTTTTGATG	NA	False	NA	NA	False	AATAAA	-32	NA	7534666	7534175	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_-_7534200_7534700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135731	chrX	-	969	5	NNC	ENSMUSG00000031146.7	novel	1157	5	NA	NA	226	-3	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	955.687579703744	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAATAAGTTAACTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	7537326	7534182	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_7534746_7535165_7535257_7535653_7535750_7535841_7535998_7537263
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135764	chrX	+	1551	2	ISM	ENSMUSG00000031149.8	ENSMUST00000033489.8	1339	3	122	0	122	0	intron_retention	FALSE	canonical	3	906	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCCTCCTGTGTGAAG	1292	False	NA	7	True	AATAAA	-20	NA	7594799	7597303	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_+_7595002_7595954
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135772	chrX	+	1417	1	ISM	ENSMUSG00000000134.18	ENSMUST00000077680.10	3277	10	11128	0	4356	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTCCCGTTCTTGTT	1339	False	NA	25	True	AATAAA	-36	NA	7640024	7641441	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_+_7640000_7641400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135784	chrX	+	252	1	ISM	ENSMUSG00000031155.18	ENSMUST00000033495.15	2045	6	4879	0	4563	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATTGCCATTTATAGAA	NA	False	NA	5	True	AATAAA	-15	NA	7749419	7749671	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_+_7749400_7749700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135797	chrX	-	1115	7	FSM	ENSMUSG00000031157.11	ENSMUST00000033497.9	1104	7	-10	-1	-10	1	multi-exon	FALSE	canonical	3	139	junction_6	154.654902569847	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGGCTTGAGTGCTTCC	286	False	NA	0	True	AATAAA	-23	NA	7765518	7760756	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765407
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135808	chrX	-	1203	7	NIC	ENSMUSG00000031157.11	novel	1148	7	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	70	junction_6	180.072824774373	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGAGGCTTGAGTGCTT	585	False	NA	-2	True	AATAAA	-21	NA	7765219	7760758	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765018
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135831	chrX	+	1000	5	NIC	ENSMUSG00000031158.12	novel	2381	6	NA	NA	-22	-103	intron_retention	FALSE	canonical	3	843	junction_3	49.2290564605904	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGTCTGCCTTCAGT	1167	False	NA	31	True	TTTAAA	-18	NA	7765573	7773106	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_+_7765709_7767199_7767300_7769911_7769976_7772309_7772631_7772726
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135857	chrX	-	947	1	Genic_Genomic	ENSMUSG00000031160.5	novel	NA	NA	NA	NA	3389	4	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTTTTCTTTTCTTC	NA	False	NA	NA	False	AATAAA	-35	NA	7791457	7790510	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_-_7790500_7791500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135870	chrX	-	658	4	FSM	ENSMUSG00000031163.3	ENSMUST00000033503.3	673	4	15	0	15	0	multi-exon	FALSE	canonical	2	4	junction_3	18.5472369909914	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTCACTCTTGGCAGAG	NA	False	NA	-9	True	AATAAA	-21	NA	7884716	7870438	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_7870742_7871941_7872098_7881456_7881595_7884655
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135876	chrX	-	973	4	NNC	ENSMUSG00000031163.3	novel	673	4	NA	NA	2658	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	19.4821855949366	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTTCCTCACTCTTGG	NA	False	NA	-14	True	AATAAA	-16	NA	7882073	7870443	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_7870742_7871941_7872098_7881456_7881548_7881645
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135894	chrX	-	865	2	Genic_Genomic	ENSMUSG00000080877.2	novel	386	1	NA	NA	-8498	61	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGCCAAATTACCTTCA	9446	False	NA	NA	False	NA	NA	NA	7913733	7904788	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_-_7905352_7913431
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135946	chrX	-	1240	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115617.10	1152	7	-70	-18	7	9	multi-exon	FALSE	canonical	3	391	junction_1	339.486213105759	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTTCCTTATTCAAAC	6492	False	NA	2	True	ATTAAA	-34	NA	8012005	8008588	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_8009195_8009485_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135968	chrX	-	1161	7	NNC	ENSMUSG00000031167.17	novel	1338	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	387.408914025822	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATAATGCTTTTTCCT	6559	False	NA	-7	True	ATTAAA	-25	NA	8011938	8008597	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_8009195_8009489_8009569_8009896_8009991_8010082_8010187_8010811_8010919_8011193_8011312_8011876
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135990	chrX	-	1481	6	NIC	ENSMUSG00000031167.17	novel	1338	7	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	855	junction_1	167.275341876799	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATACTGATAATGCTTTT	6559	False	NA	-11	True	ATTAAA	-21	NA	8011938	8008601	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_-_8009195_8009489_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000135992	chrX	-	1149	7	NNC	ENSMUSG00000031167.17	novel	1225	7	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	429.57941317319	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATACTGATAATGCTTTT	6559	False	NA	-11	True	ATTAAA	-21	NA	8011938	8008601	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_8009195_8009489_8009572_8009903_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136029	chrX	-	1136	5	NNC	ENSMUSG00000031168.15	novel	1743	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	336.420124249427	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGAGATATTTAATTACT	NA	False	NA	-3	True	AATAAA	-19	NA	8059140	8051567	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_8052073_8052882_8053014_8053121_8053159_8056317_8056676_8059035
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136035	chrX	-	1097	5	NNC	ENSMUSG00000031168.15	novel	1743	5	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	335.784901387778	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGAGAGATATTTAATTA	NA	False	NA	-5	True	AATAAA	-17	NA	8059112	8051569	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_8052068_8052882_8053014_8053121_8053159_8056317_8056676_8059039
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136042	chrX	-	1103	5	NNC	ENSMUSG00000031168.15	novel	1743	5	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	342.13776465044	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGAGAGATATTTAATTA	NA	False	NA	-5	True	AATAAA	-17	NA	8059112	8051569	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_8052073_8052882_8053011_8053117_8053159_8056317_8056676_8059039
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136043	chrX	-	1127	5	NNC	ENSMUSG00000031168.15	novel	1743	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	341.704825104943	54	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGAGAGATATTTAATTA	NA	False	NA	-5	True	AATAAA	-17	NA	8059140	8051569	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_8052073_8052882_8053011_8053121_8053159_8056317_8056676_8059039
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136049	chrX	-	719	4	NNC	ENSMUSG00000031168.15	novel	1743	5	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	374.770151781951	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGAGAGATATTTAATTA	NA	False	NA	-5	True	AATAAA	-17	NA	8059112	8051569	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_8052073_8052882_8052954_8056603_8056676_8059039
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136051	chrX	-	1082	4	NNC	ENSMUSG00000031168.15	novel	1743	5	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	374.770151781951	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGAGAGATATTTAATTA	NA	False	NA	-5	True	AATAAA	-17	NA	8059112	8051569	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_8052073_8052882_8053014_8056300_8056676_8059039
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136066	chrX	-	1674	13	FSM	ENSMUSG00000031171.12	ENSMUST00000115595.8	1656	13	-16	-2	-5	2	multi-exon	FALSE	canonical	3	233	junction_4	23.6231995198694	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCACGTTGCTTACTTTT	NA	False	NA	-12	True	AATAAA	-23	NA	8118650	8106656	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136092	chrX	-	848	2	Genic_Genomic	ENSMUSG00000078208.2_ENSMUSG00000060685.5	novel	850	1	NA	NA	-15	-5	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGTATCAAGTTGATGT	NA	False	NA	NA	False	AATAAA	-26	NA	8842813	8828377	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_-_8828585_8842172
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136108	chrX	-	918	1	FSM	ENSMUSG00000078206.2	ENSMUST00000105004.2	856	1	-55	-7	-55	7	mono-exon	FALSE	NA	NA	NA	NA	NA	883	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATGTTTAAATTCTTAA	NA	False	NA	NA	False	AATAAA	-38	NA	8853049	8852131	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_8852100_8853000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136112	chrX	+	858	2	Genic_Genomic	ENSMUSG00000072249.4_ENSMUSG00000071815.7	novel	847	1	NA	NA	-18	-5	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAGTATCAAATTGATGC	6664	False	NA	25	True	AATAAA	-25	NA	8899713	8930095	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_+_8899868_8929391
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136116	chrX	-	842	2	Antisense	novelGene_ENSMUSG00000072249.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTCCTGCCCACCGACC	NA	False	NA	NA	False	NA	NA	NA	8930095	8899716	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chrX_-_8899732_8929268
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136118	chrX	+	850	2	Genic_Genomic	ENSMUSG00000072249.4_ENSMUSG00000071815.7	novel	847	1	NA	NA	-15	-5	multi-exon	TRUE	canonical	2	18	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAGTATCAAATTGATGC	6667	False	NA	25	True	AATAAA	-25	NA	8899716	8930095	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_+_8899777_8929305
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136124	chrX	-	226	2	Antisense	novelGene_ENSMUSG00000072249.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGGTCAGGTAGCCGCT	NA	False	NA	NA	False	NA	NA	NA	8930095	8900340	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chrX_-_8900471_8929999
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136132	chrX	-	852	2	Antisense	novelGene_ENSMUSG00000072249.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCTGCCCACCGACCACA	NA	False	NA	NA	False	NA	NA	NA	8930095	8909801	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chrX_-_8909868_8929309
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136148	chrX	-	857	2	Antisense	novelGene_ENSMUSG00000072249.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTCCTGCCCACCGACC	NA	False	NA	NA	False	NA	NA	NA	8930095	8909804	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chrX_-_8909876_8929309
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136155	chrX	+	930	1	FSM	ENSMUSG00000072249.4	ENSMUST00000097029.4	847	1	-75	-8	-75	8	mono-exon	FALSE	NA	NA	NA	NA	NA	470	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATGCTTAAATTCTTAAC	NA	False	NA	38	True	AATAAA	-38	NA	8929178	8930108	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_8929200_8930100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136167	chrX	+	863	1	FSM	ENSMUSG00000083123.2	ENSMUST00000122268.2	528	1	-172	-163	-172	163	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGTATAAAATTGATGT	NA	False	NA	NA	False	AATAAA	-26	NA	8946110	8946973	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_8946100_8947000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136169	chrX	-	1181	2	Intergenic	novelGene_470	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	0	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTGGTTGCGTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	9198917	9195213	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrX_-_9196165_9198687
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136191	chrX	+	429	1	ISM	ENSMUSG00000058254.13	ENSMUST00000076354.13	1733	8	111016	3	111016	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATGTTGTGGTTTTCTTC	NA	False	NA	NA	False	AATAAA	-18	NA	10462412	10462841	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_+_10462400_10462800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136193	chrX	+	160	1	Intergenic	novelGene_471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGGAGTTGAAGCAGATGA	NA	False	NA	NA	False	NA	NA	NA	10529037	10529197	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrX_+_10529000_10529200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136236	chrX	-	2624	7	FSM	ENSMUSG00000044148.7	ENSMUST00000060108.7	2699	7	75	0	75	0	multi-exon	FALSE	canonical	3	210	junction_4	24.9377001523575	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTACAGTTTTTAATTTC	NA	False	NA	-3	True	AATAAA	-25	NA	12539832	12521117	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_12522726_12524100_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264_12539400_12539564
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136250	chrX	+	197	1	Intergenic	novelGene_472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	7437	False	NA	NA	False	AATAAA	-16	NA	13049465	13049662	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrX_+_13049500_13049700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136258	chrX	-	1319	2	Antisense	novelGene_ENSMUSG00000084349.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTCTTTATAGTGGCT	NA	False	NA	NA	False	NA	NA	NA	13080985	13068781	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chrX_-_13070075_13080959
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136262	chrX	-	1356	2	Antisense	novelGene_ENSMUSG00000084349.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTCTTTATAGTGGCT	NA	False	NA	NA	False	NA	NA	NA	13080985	13068781	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chrX_-_13070112_13080959
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136264	chrX	-	1364	2	Antisense	novelGene_ENSMUSG00000084349.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTCTTTATAGTGGCT	NA	False	NA	NA	False	NA	NA	NA	13080985	13068781	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chrX_-_13070112_13080951
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136281	chrX	-	1344	2	Antisense	novelGene_ENSMUSG00000084349.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGTGTCTTTATAGTG	NA	False	NA	NA	False	NA	NA	NA	13080985	13068784	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chrX_-_13070112_13080968
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136300	chrX	-	290	1	ISM	ENSMUSG00000031012.18	ENSMUST00000156096.8	7707	24	264749	3912	5487	339	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAATGCCTTTGGGTCCTT	NA	False	NA	NA	False	AATATA	-23	NA	13387520	13387230	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_-_13387200_13387500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136375	chrX	-	219	1	NIC	ENSMUSG00000031059.10	novel	908	3	NA	NA	2075	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGTTACTGCTGCTTT	NA	False	NA	-4	True	ATTAAA	-14	NA	20481783	20481564	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_-_20481600_20481800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136394	chrX	+	329	1	ISM	ENSMUSG00000001924.16	ENSMUST00000089217.11	4044	26	24052	473	1783	-473	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCCATCCTGGCTGTCT	387	False	NA	48	True	AATAAA	-17	NA	20548616	20548945	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_+_20548600_20548900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136405	chrX	+	748	1	Genic_Genomic	ENSMUSG00000031066.11	novel	NA	NA	NA	NA	7968	1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGCTGTTTTGAGTGTTT	NA	False	NA	4	True	NA	NA	NA	20586031	20586779	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_+_20586000_20586800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136409	chrX	+	307	2	NNC	ENSMUSG00000001127.13	novel	2439	17	NA	NA	-39	-18168	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTTTGTCTGAGTCTT	1084	False	NA	NA	False	NA	NA	NA	20664013	20699788	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_20664121_20699588
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136419	chrX	+	985	7	NNC	ENSMUSG00000001127.13	novel	826	8	NA	NA	-4	-1	at_least_one_novel_splicesite	TRUE	canonical	3	39	junction_6	124.993333155546	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCTTTGTCCTTCATTGT	6290	False	NA	NA	False	AATAAA	-26	NA	20714798	20719142	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20718834
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136460	chrX	-	419	1	ISM	ENSMUSG00000009406.14	ENSMUST00000009550.14	3548	6	16034	761	16034	-761	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGTATTTTTTTTTC	NA	False	NA	-1	True	AATATA	-24	NA	20800813	20800394	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_-_20800400_20800800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136469	chrX	-	591	7	NNC	ENSMUSG00000001134.10	novel	875	7	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	227.473624844728	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCTTTTTTCCCTAATT	NA	False	NA	-3	True	ATTAAA	-25	NA	20828230	20818156	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_20818263_20818446_20818505_20825592_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136487	chrX	-	689	6	FSM	ENSMUSG00000001134.10	ENSMUST00000150719.8	659	6	-30	0	29	0	multi-exon	FALSE	canonical	3	501	junction_1	55.8619727542807	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATAGTCCTTTTTTCCC	NA	False	NA	-8	True	ATTAAA	-20	NA	20828184	20818161	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136490	chrX	-	578	7	NNC	ENSMUSG00000001134.10	novel	875	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	227.889410314155	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATAGTCCTTTTTTCCC	NA	False	NA	-8	True	ATTAAA	-20	NA	20828225	20818161	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_20818263_20818446_20818511_20825596_20825700_20825973_20826042_20826176_20826259_20827918_20828026_20828172
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136494	chrX	-	586	7	NNC	ENSMUSG00000001134.10	novel	875	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	230.766416293379	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATAGTCCTTTTTTCCC	NA	False	NA	-8	True	ATTAAA	-20	NA	20828230	20818161	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_20818263_20818446_20818511_20825596_20825705_20825975_20826042_20826176_20826259_20827918_20828026_20828172
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136571	chrX	+	219	1	Intergenic	novelGene_473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCATGGAAGGAGTTACA	NA	False	NA	NA	False	NA	NA	NA	21338590	21338809	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrX_+_21338600_21338800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136580	chrX	-	3221	8	ISM	ENSMUSG00000036782.14	ENSMUST00000115313.8	3251	9	3387	14	3358	0	3prime_fragment	TRUE	canonical	3	772	junction_6	153.107671864193	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23227934	23085523	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23227732
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136599	chrX	+	771	1	Intergenic	novelGene_474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCGTGTTCGACTGTCT	NA	False	NA	NA	False	NA	NA	NA	27803785	27804556	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrX_+_27803800_27804600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136623	chrX	+	188	1	Intergenic	novelGene_475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATTACATTAAAATTTT	NA	False	NA	NA	False	NA	NA	NA	35112525	35112713	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrX_+_35112500_35112700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136628	chrX	+	1890	3	FSM	ENSMUSG00000006373.11	ENSMUST00000073339.7	1857	3	-29	-4	-29	4	multi-exon	FALSE	canonical	3	454	junction_1	42	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCTTTCATTTTTTAA	1639	False	NA	NA	False	AATAAA	-19	NA	35861829	35869736	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_35862268_35865773_35865930_35868440
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136634	chrX	+	1214	1	Genic_Genomic	ENSMUSG00000006373.11	novel	NA	NA	NA	NA	6662	2	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGAGGCTTTCATTTTTT	8330	False	NA	NA	False	AATAAA	-17	NA	35868520	35869734	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_+_35868500_35869700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136636	chrX	+	408	1	Intergenic	novelGene_476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCATTTCACTTTAGC	9569	False	NA	NA	False	NA	NA	NA	35869759	35870167	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrX_+_35869800_35870200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136663	chrX	+	1231	4	NNC	ENSMUSG00000016319.4	novel	1240	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5605.09585605416	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTCGTTGTTTGTTT	NA	False	NA	29	True	AATAAA	-31	NA	36059300	36062460	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_36059495_36060495_36060983_36061400_36061530_36062039
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136677	chrX	-	1262	7	NIC	ENSMUSG00000006423.16	novel	678	3	NA	NA	18	8974	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	75.5389891968968	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTTTTTGCTTCGTCA	NA	False	NA	NA	False	NA	NA	NA	36127873	36078415	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_-_36078984_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136684	chrX	+	518	2	Antisense	novelGene_ENSMUSG00000084265.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGATTTCTTTGCCAGG	NA	False	NA	NA	False	NA	NA	NA	36102631	36103802	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chrX_+_36102982_36103634
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136687	chrX	-	3283	7	FSM	ENSMUSG00000006423.16	ENSMUST00000115248.10	3340	7	57	0	-16	0	multi-exon	FALSE	canonical	3	146	junction_1	34.0999348321306	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTGTTTTGATCATTT	NA	False	NA	NA	False	AATAAA	-28	NA	36127842	36112195	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_36114816_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136776	chrX	-	632	3	NNC	ENSMUSG00000079641.4	novel	612	3	NA	NA	-19	-35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6424.5	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTCTGGTTTATAAAG	NA	False	NA	-5	True	AATAAA	-19	NA	36348838	36346207	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_36346403_36347637_36348014_36348777
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136778	chrX	-	397	3	NNC	ENSMUSG00000079641.4	novel	612	3	NA	NA	-19	-35	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	6424	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTCTGGTTTATAAAG	NA	False	NA	-5	True	AATAAA	-19	NA	36348838	36346207	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_36346403_36347637_36347779_36348777
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136781	chrX	-	380	3	NNC	ENSMUSG00000079641.4	novel	612	3	NA	NA	-19	-35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6424.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTCTGGTTTATAAAG	NA	False	NA	-5	True	AATAAA	-19	NA	36348838	36346207	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_36346403_36347637_36347762_36348777
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136783	chrX	-	328	3	NNC	ENSMUSG00000079641.4	novel	612	3	NA	NA	-1431	-35	at_least_one_novel_splicesite	FALSE	canonical	2	237	junction_2	6306	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTCTGGTTTATAAAG	NA	False	NA	-5	True	AATAAA	-19	NA	36350486	36346207	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_36346403_36347637_36347742_36350457
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136786	chrX	-	443	3	NNC	ENSMUSG00000079641.4	novel	612	3	NA	NA	-19	-35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6424.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTCTGGTTTATAAAG	NA	False	NA	-5	True	AATAAA	-19	NA	36348838	36346207	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_36346403_36347637_36347825_36348777
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136794	chrX	-	329	3	NNC	ENSMUSG00000079641.4	novel	612	3	NA	NA	-15	-35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6424.5	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTCTGGTTTATAAAG	NA	False	NA	-5	True	AATAAA	-19	NA	36348834	36346207	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_36346403_36347637_36347715_36348777
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136867	chrX	-	869	4	ISM	ENSMUSG00000071773.5	ENSMUST00000115210.2	883	5	3887	-23	3887	23	3prime_fragment	FALSE	canonical	3	106	junction_3	6.34209919681348	402	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGTGTCTTCTGTAAAA	NA	False	NA	0	True	AATAAA	-24	NA	36482024	36477433	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_-_36477701_36479202_36479249_36481305_36481649_36481811
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136870	chrX	-	831	4	NNC	ENSMUSG00000071773.5	novel	883	5	NA	NA	3923	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	56.1209012361309	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATTCATGTGTCTTCT	NA	False	NA	-6	True	AATAAA	-18	NA	36481988	36477439	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_36477701_36479202_36479249_36481305_36481649_36481807
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136876	chrX	-	779	3	NIC	ENSMUSG00000071773.5	novel	883	5	NA	NA	3923	15	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	50.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTATTCATGTGTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	36481988	36477441	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_-_36477701_36481305_36481649_36481811
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136941	chrX	+	732	4	NNC	ENSMUSG00000096788.9	novel	799	4	NA	NA	-14	2	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_3	23.6690139681023	45	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTTGTGCTTCTTC	NA	False	NA	NA	False	AATAAA	-18	NA	36712090	36723468	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_36712216_36712377_36712790_36720942_36720989_36723319
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136955	chrX	-	823	4	FSM	ENSMUSG00000079629.6	ENSMUST00000115169.4	795	4	-20	-8	-20	6	multi-exon	FALSE	canonical	2	5	junction_2	7.03957069398096	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTGCTTCTTCTG	NA	False	NA	NA	False	AATAAA	-20	NA	36825143	36820761	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_36820996_36822809_36822856_36824438_36824851_36825012
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000136969	chrX	-	1001	4	FSM	ENSMUSG00000079628.4	ENSMUST00000115166.3	979	4	-22	0	-22	0	multi-exon	FALSE	canonical	3	17	junction_1	1.24721912892465	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTCTTTTTGATTA	6346	False	NA	NA	False	AATAAA	-21	NA	36833002	36828152	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_36828390_36829677_36829724_36832090_36832497_36832690
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137000	chrX	+	898	6	NNC	ENSMUSG00000095180.11	novel	893	6	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	1502.91644478328	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGTGATTCGAGTAATA	8506	False	NA	19	True	ATTAAA	-16	NA	36891636	36897310	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_36891707_36892583_36892657_36893274_36893357_36893532_36893891_36894500_36894547_36897041
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137098	chrX	+	695	3	FSM	ENSMUSG00000053909.9	ENSMUST00000115150.4	763	3	68	0	68	0	multi-exon	FALSE	canonical	2	4	junction_1	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGTTTGTGTTTGTCA	NA	False	NA	NA	False	AATAAA	-18	NA	37155419	37160568	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_37155824_37158275_37158322_37160323
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137101	chrX	+	960	3	FSM	ENSMUSG00000050197.6	ENSMUST00000152730.4	876	3	-74	-10	-74	10	multi-exon	FALSE	canonical	3	73	junction_1	2	392	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATGTGCTTTCTGGGGG	NA	False	NA	12	True	AATAAA	-25	NA	37210021	37218854	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_37210700_37211950_37211997_37218618
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137113	chrX	+	567	5	NNC	ENSMUSG00000084009.2	novel	806	6	NA	NA	3456	102	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.84767985741633	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCCCCATGTGTCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	37389200	37395007	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_37389322_37389479_37389510_37390586_37390738_37391584_37391631_37394788
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137153	chrX	+	642	4	NIC	ENSMUSG00000000355.14	novel	783	6	NA	NA	-12	98	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	295.154573439448	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGACTCAATGTCCTAT	NA	False	NA	10	True	ATTAAA	-23	NA	37689519	37702401	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_+_37689656_37694815_37694950_37700642_37700711_37702097
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137154	chrX	+	939	7	NNC	ENSMUSG00000000355.14	novel	783	6	NA	NA	-12	98	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	277.22538965013	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGACTCAATGTCCTAT	NA	False	NA	10	True	ATTAAA	-23	NA	37689519	37702401	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_37689656_37690228_37690275_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137163	chrX	+	845	7	NNC	ENSMUSG00000000355.14	novel	764	4	NA	NA	205	98	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	281.076749107586	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGACTCAATGTCCTAT	NA	False	NA	10	True	ATTAAA	-23	NA	37689736	37702401	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_37689779_37690228_37690275_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137182	chrX	-	2787	23	ISM	ENSMUSG00000037475.16	ENSMUST00000047037.15	7622	39	0	32192	0	-3775	5prime_fragment	FALSE	canonical	3	149	junction_4	23.7647300993345	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTTGATGTAGCGAT	NA	False	NA	NA	False	AATAAA	-43	NA	41000778	40916059	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_-_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137190	chrX	+	471	1	ISM	ENSMUSG00000025862.15	ENSMUST00000115073.9	6171	34	127392	6	124529	4	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTATGCTTTATCTCTT	NA	False	NA	13	True	AATAAA	-16	NA	41365585	41366056	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_+_41365600_41366100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137193	chrX	+	202	1	Intergenic	novelGene_477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTCCAACTTTAAAGAT	NA	False	NA	NA	False	NA	NA	NA	42542422	42542624	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrX_+_42542400_42542600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137210	chrX	+	205	1	Intergenic	novelGene_478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTATTTTGCTCCCATA	NA	False	NA	NA	False	NA	NA	NA	47298851	47299056	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrX_+_47298900_47299100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137227	chrX	-	2227	16	FSM	ENSMUSG00000036932.15	ENSMUST00000037349.8	2237	16	11	-1	7	1	multi-exon	FALSE	canonical	3	1039	junction_9	82.1482129378898	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTGTTTTATTTTAAA	NA	False	NA	0	True	ATTAAA	-17	NA	47602429	47563819	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137235	chrX	-	2122	16	NNC	ENSMUSG00000036932.15	novel	2237	16	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	301.31942445776	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	False	NA	-1	True	ATTAAA	-16	NA	47602329	47563820	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569141_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137265	chrX	+	989	1	ISM	ENSMUSG00000031107.7	ENSMUST00000033433.3	1747	6	14731	0	3555	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGCATTTGGTCCACTCA	NA	False	NA	NA	False	NA	NA	NA	47798611	47799600	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_+_47798600_47799600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137278	chrX	+	723	1	FSM	ENSMUSG00000082192.3	ENSMUST00000121891.3	340	1	-122	-261	-122	261	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAATCTGCAAATTCATC	NA	False	NA	NA	False	NA	NA	NA	48749714	48750437	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_48749700_48750400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137284	chrX	-	3179	2	ISM	ENSMUSG00000085396.8	ENSMUST00000148530.3	716	6	36	12629	-6	-12629	5prime_fragment	FALSE	canonical	3	63	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAAAAAACCCGGTACCA	NA	False	NA	NA	False	AATAGA	-39	NA	49724144	49717016	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_-_49719873_49723821
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137292	chrX	-	182	1	Intergenic	novelGene_479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATATACATTCTAAGCTT	NA	False	NA	NA	False	NA	NA	NA	50097351	50097169	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrX_-_50097200_50097400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137302	chrX	-	1184	8	FSM	ENSMUSG00000055780.11	ENSMUST00000069509.4	4120	8	62	2874	62	-2874	multi-exon	FALSE	canonical	3	16	junction_1	4.17475405605784	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGCAACCTGAAGGACAG	NA	False	NA	NA	False	CATAAA	-41	NA	50889959	50845709	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_50846351_50854031_50854113_50882224_50882281_50885803_50885850_50886599_50886704_50887371_50887431_50889689_50889806_50889878
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137336	chrX	-	491	1	FSM	ENSMUSG00000083621.2	ENSMUST00000119571.2	408	1	-25	-58	-25	58	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCGTGCTGCAAAGAGAAA	NA	False	NA	NA	False	AATAAA	-34	NA	51861651	51861160	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_51861200_51861700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137338	chrX	-	408	2	Genic_Genomic	ENSMUSG00000083621.2	novel	408	1	NA	NA	-25	53	multi-exon	FALSE	canonical	0	0	junction_1	0	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACCTCGTGCTGCAAAG	NA	False	NA	NA	False	AATAAA	-29	NA	51861651	51861165	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_-_51861476_51861553
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137342	chrX	-	401	2	Genic_Genomic	ENSMUSG00000083621.2	novel	408	1	NA	NA	-25	52	multi-exon	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATACCTCGTGCTGCAAA	NA	False	NA	NA	False	AATAAA	-28	NA	51861651	51861166	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_-_51861476_51861559
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137363	chrX	+	1579	2	FSM	ENSMUSG00000073207.2	ENSMUST00000101588.2	1536	2	-37	-6	-37	6	multi-exon	FALSE	canonical	3	142	junction_1	0	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCTGTGATTCTTGAAA	NA	False	NA	NA	False	AATAAA	-29	NA	51880039	51888351	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_51880203_51886935
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137393	chrX	-	971	2	Antisense	novelGene_ENSMUSG00000081684.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGGTCCGTGACTTTCTA	NA	False	NA	NA	False	NA	NA	NA	52017672	51987441	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chrX_-_51988384_52017643
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137402	chrX	+	468	1	ISM	ENSMUSG00000025626.17	ENSMUST00000078944.13	4350	11	44210	0	31905	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTGTCTGCTTTGTAA	NA	False	NA	17	True	AATAAA	-17	NA	52045352	52045820	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_+_52045400_52045800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137411	chrX	+	586	4	NNC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	-31	-14032	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	1107.63933159169	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCTTACATTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	52076982	52096504	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_52077128_52087967_52088075_52090964_52091149_52096354
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137473	chrX	-	1238	8	NNC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-12	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	632.031289589691	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGTATATTTATCACTT	NA	False	NA	-4	True	AGTAAA	-24	NA	52759810	52744860	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748911_52749009_52749789_52749908_52752956_52753054_52753476_52753824_52759728
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137480	chrX	-	1245	8	NNC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-12	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	632.031289589691	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGTATATTTATCACTT	NA	False	NA	-4	True	AGTAAA	-24	NA	52759810	52744860	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748904_52749009_52749789_52749908_52752956_52753054_52753476_52753824_52759728
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137499	chrX	-	887	8	NNC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	563.490651462572	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGACTTTAGTATATTTA	NA	False	NA	-10	True	AGTAAA	-18	NA	52759810	52744866	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748911_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52759728
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137500	chrX	-	888	7	NNC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	603.531666296162	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGACTTTAGTATATTTA	NA	False	NA	-10	True	AGTAAA	-18	NA	52759810	52744866	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52752956_52753054_52759728
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137508	chrX	-	1231	9	NNC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	440.618244629067	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGACTTTAGTATATTTA	NA	False	NA	-10	True	AGTAAA	-18	NA	52759810	52744866	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52753476_52753824_52759734
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137511	chrX	-	1228	9	NNC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	459.078901170594	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGACTTTAGTATATTTA	NA	False	NA	-10	True	AGTAAA	-18	NA	52759808	52744866	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749002_52749789_52749908_52751980_52752016_52752989_52753054_52753476_52753824_52759728
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137539	chrX	-	1069	8	NNC	ENSMUSG00000054626.12	novel	1032	8	NA	NA	-39	6	at_least_one_novel_splicesite	TRUE	canonical	3	47	junction_7	85.2532840949813	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCAAATAGTCCTTTGTA	NA	False	NA	NA	False	AATAAA	-19	NA	52799712	52785708	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798218_52799598
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137551	chrX	-	999	8	NNC	ENSMUSG00000054626.12	novel	984	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	103.774087442337	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGTGGCAAATAGTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	52799673	52785713	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_52786140_52786458_52786558_52789052_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798188_52799598
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137581	chrX	+	907	7	NIC	ENSMUSG00000031125.3	novel	1022	8	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	19.6864307469779	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGCAAATAGTCCTT	NA	False	NA	NA	False	AATAAA	-15	NA	55181920	55198858	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_+_55181986_55183770_55183835_55184104_55184140_55192435_55192554_55193247_55193348_55198014_55198114_55198432
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137618	chrX	+	771	1	ISM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	12798	0	12515	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGACTTGAGTTAACTTG	NA	False	NA	16	True	AATAAA	-31	NA	56111772	56112543	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_+_56111800_56112500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137631	chrX	+	2184	17	NNC	ENSMUSG00000079584.3	novel	2156	17	NA	NA	-7	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	151.271641013774	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCAGTTTCTTTGATAC	NA	False	NA	26	True	TATAAA	-19	NA	56454506	56534144	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_56454734_56459619_56459688_56461126_56461221_56463018_56463147_56463508_56463639_56467202_56467331_56468624_56468741_56478568_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56508601_56509625_56509775_56513777_56513890_56517713_56517886_56533944
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137648	chrX	+	3656	3	FSM	ENSMUSG00000067860.12	ENSMUST00000088627.11	3949	3	367	-74	0	74	multi-exon	FALSE	canonical	3	194	junction_2	9.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTAGAGAATTTCTGGTG	9867	False	NA	8	True	AATAAA	-18	NA	57076369	57081993	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_57077598_57078721_57078886_57079729
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137676	chrX	+	1462	1	FSM	ENSMUSG00000057615.6	ENSMUST00000075983.6	1459	1	0	-3	0	3	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGTCTTTTCATGGTTA	NA	False	NA	16	True	AATAAA	-29	NA	60753102	60754564	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_60753100_60754600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137681	chrX	-	765	1	Intergenic	novelGene_480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAAAAGAAGAAAGATCAA	NA	False	NA	NA	False	NA	NA	NA	61128357	61127592	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrX_-_61127600_61128400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137695	chrX	-	706	4	NNC	ENSMUSG00000085757.8	novel	594	3	NA	NA	-26398	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	23.2522400354604	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTTGATTTTTTTCTC	NA	False	NA	NA	False	AATAAA	-32	NA	61597015	61554137	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_61554605_61558040_61558144_61591628_61591699_61596949
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137696	chrX	-	706	4	NNC	ENSMUSG00000085757.8	novel	594	3	NA	NA	-21914	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.6126143312331	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTTGATTTTTTTCTC	NA	False	NA	NA	False	AATAAA	-32	NA	61592531	61554137	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_61554605_61558040_61558144_61591628_61591699_61592465
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137697	chrX	-	706	4	NNC	ENSMUSG00000085757.8	novel	594	3	NA	NA	-27892	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.6126143312331	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTTGATTTTTTTCTC	NA	False	NA	NA	False	AATAAA	-32	NA	61598509	61554137	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_61554605_61558040_61558144_61591628_61591699_61598443
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137700	chrX	-	665	3	NNC	ENSMUSG00000085757.8	novel	594	3	NA	NA	5301	7	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	16	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTTGATTTTTTTCTC	NA	False	NA	NA	False	AATAAA	-32	NA	61565316	61554137	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_61554605_61558040_61558144_61565221
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137704	chrX	-	710	4	NNC	ENSMUSG00000085757.8	novel	594	3	NA	NA	-26403	7	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	21.9241115365405	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTTGATTTTTTTCTC	NA	False	NA	NA	False	AATAAA	-32	NA	61597020	61554137	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_61554605_61558040_61558144_61575716_61575786_61596949
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137706	chrX	-	730	4	NNC	ENSMUSG00000085757.8	novel	594	3	NA	NA	-5996	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	26.4112770527204	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTTGATTTTTTTCTC	NA	False	NA	NA	False	AATAAA	-32	NA	61576613	61554137	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_61554605_61558040_61558144_61568919_61569019_61576552
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137719	chrX	-	685	4	NNC	ENSMUSG00000085757.8	novel	594	3	NA	NA	-24885	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	23.2522400354604	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTTGATTTTTTTCTC	NA	False	NA	NA	False	AATAAA	-32	NA	61595502	61554137	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_61554605_61558040_61558144_61591628_61591699_61595457
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137745	chrX	-	1598	1	FSM	ENSMUSG00000081752.4	ENSMUST00000121773.2	1101	1	-57	-440	-57	440	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGATTAGCAGTGCTAGG	NA	False	NA	NA	False	ATTAAA	-27	NA	61820348	61818750	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_61818800_61820300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137771	chrX	+	2558	3	ISM	ENSMUSG00000000838.18	ENSMUST00000114653.2	4058	17	33521	0	487	0	3prime_fragment	FALSE	canonical	3	826	junction_1	32	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67755943	67761569	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_+_67756020_67756846_67756930_67759170
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137775	chrX	+	2402	1	NIC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	3711	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67759167	67761569	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_+_67759200_67761600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137787	chrX	+	801	5	NNC	ENSMUSG00000062170.13	novel	799	5	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_3	263.423969106837	180	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGATTCTTTTTGTTAAA	NA	False	NA	27	True	ATTAAA	-27	NA	67805438	67848173	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_67805838_67807537_67807616_67815650_67815748_67847214_67847300_67848031
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137791	chrX	+	718	4	NNC	ENSMUSG00000062170.13	novel	679	4	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_2	300.371251768356	197	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTGGATTCTTTTTGTT	NA	False	NA	24	True	ATTAAA	-24	NA	67805440	67848170	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_67805838_67815650_67815748_67847214_67847300_67848031
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137810	chrX	+	772	5	NNC	ENSMUSG00000062170.13	novel	799	5	NA	NA	15	-6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	266.554286215773	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAATCTGGATTCTTTTT	NA	False	NA	21	True	ATTAAA	-21	NA	67805459	67848167	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_67805838_67807537_67807616_67815650_67815748_67847216_67847300_67848031
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137811	chrX	+	611	3	NIC	ENSMUSG00000062170.13	novel	679	4	NA	NA	15	-6	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	164.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAATCTGGATTCTTTTT	NA	False	NA	21	True	ATTAAA	-21	NA	67805459	67848167	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_+_67805838_67815650_67815748_67848031
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137812	chrX	+	767	5	NNC	ENSMUSG00000062170.13	novel	799	5	NA	NA	15	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	309.109507294745	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAATCTGGATTCTTTTT	NA	False	NA	21	True	ATTAAA	-21	NA	67805459	67848167	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_67805838_67807537_67807616_67815661_67815748_67847210_67847300_67848031
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137816	chrX	+	689	4	NNC	ENSMUSG00000062170.13	novel	679	4	NA	NA	15	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	357.063330828331	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAATCTGGATTCTTTTT	NA	False	NA	21	True	ATTAAA	-21	NA	67805459	67848167	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_67805838_67815661_67815748_67847210_67847300_67848031
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137825	chrX	+	920	6	NNC	ENSMUSG00000062170.13	novel	842	6	NA	NA	15	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	356.123911019746	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAATCTGGATTCTTTTT	NA	False	NA	21	True	ATTAAA	-21	NA	67805459	67848167	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_67805842_67807537_67807616_67812561_67812700_67815650_67815748_67847210_67847300_67848031
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137831	chrX	+	138	1	NIC	ENSMUSG00000062170.13	novel	799	5	NA	NA	42490	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAATCTGGATTCTTTTT	NA	False	NA	21	True	ATTAAA	-21	NA	67848029	67848167	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_+_67848000_67848200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137848	chrX	-	702	2	Genic_Genomic	ENSMUSG00000082926.4	novel	750	1	NA	NA	-42	40	multi-exon	FALSE	canonical	2	185	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTTTCATTAATAGT	NA	False	NA	NA	False	AATAAA	-19	NA	68649893	68649061	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_-_68649598_68649727
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137851	chrX	-	779	2	Genic_Genomic	ENSMUSG00000082926.4	novel	750	1	NA	NA	-42	40	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTTTCATTAATAGT	NA	False	NA	NA	False	AATAAA	-19	NA	68649893	68649061	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_-_68649694_68649746
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137863	chrX	+	1044	3	NNC	ENSMUSG00000045237.6	novel	1094	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_1	168	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGTGTCTAGCTCCCT	NA	False	NA	14	True	AATAAA	-21	NA	69429482	69433023	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_69429758_69431549_69431773_69432477
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137871	chrX	-	2517	7	FSM	ENSMUSG00000073139.10	ENSMUST00000114630.3	1307	7	-4	-1206	-4	0	multi-exon	FALSE	canonical	3	188	junction_5	21.8587638158144	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	-1	True	AATAAA	-20	NA	69520790	69503358	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_69504899_69505796_69505921_69506450_69506628_69508608_69508693_69510759_69510968_69513723_69513901_69520583
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137919	chrX	+	249	1	ISM	ENSMUSG00000073131.13	ENSMUST00000114577.8	4652	4	4889	3645	4000	77	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTAAAGAGTCAGTCACA	NA	False	NA	30	True	AATAAA	-42	NA	70864418	70864667	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_+_70864400_70864700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137934	chrX	-	1203	4	FSM	ENSMUSG00000031347.13	ENSMUST00000033713.11	1026	4	-1	-176	-1	4	multi-exon	FALSE	canonical	3	611	junction_2	29.9146935282461	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGGATTTTTACAGCTA	NA	False	NA	2	True	CATAAA	-21	NA	71960463	71957133	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_71957900_71958445_71958584_71959870_71960000_71960293
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137961	chrX	-	1188	9	NNC	ENSMUSG00000079845.9	novel	1162	9	NA	NA	-36	2	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_7	100.580502583751	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72126120	72117948	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_72118324_72118440_72118537_72120338_72120438_72121630_72121731_72122581_72122700_72124325_72124395_72125079_72125208_72125626_72125674_72125964
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137967	chrX	-	1160	9	NIC	ENSMUSG00000079845.9	novel	1162	9	NA	NA	-32	2	combination_of_known_junctions	FALSE	canonical	3	35	junction_7	103.290548938419	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72126116	72117948	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_-_72118324_72118440_72118537_72120338_72120438_72121630_72121731_72122581_72122700_72124325_72124395_72125079_72125208_72125626_72125674_72125988
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137993	chrX	-	1470	8	NIC	ENSMUSG00000057836.13	novel	1584	9	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	2	52	junction_7	514.238648640008	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-5	True	AATAAA	-18	NA	72140646	72129898	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72140586
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000137998	chrX	-	1587	8	NNC	ENSMUSG00000057836.13	novel	1645	9	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	513.130130290792	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-5	True	AATAAA	-18	NA	72140646	72129898	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135528_72137788_72137859_72138566_72138689_72140586
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138047	chrX	-	1189	9	NNC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	-1	304	at_least_one_novel_splicesite	TRUE	canonical	3	54	junction_8	130.918629308437	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGCATGCTTTCATTT	NA	False	NA	NA	False	AATAAA	-15	NA	72161309	72151710	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161199
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138054	chrX	-	1101	8	NIC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	8	303	combination_of_known_splicesites	FALSE	canonical	2	2	junction_6	152.395163027852	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161300	72151711	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158740_72158878_72161207
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138059	chrX	-	1061	8	NNC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	1	303	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_7	145.044539253799	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161307	72151711	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158860_72161207
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138097	chrX	-	514	1	Genic_Genomic	ENSMUSG00000079566.2	novel	NA	NA	NA	NA	1201	27	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGCTCAGGTTGCTGTT	NA	False	NA	NA	False	AATAAA	-41	NA	72219394	72218880	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_-_72218900_72219400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138136	chrX	+	1211	9	NIC	ENSMUSG00000067768.13	novel	1200	9	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	78.4071903590481	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	18	True	AATAAA	-18	NA	72257919	72266059	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_+_72258064_72258379_72258463_72258833_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138145	chrX	+	1176	9	NIC	ENSMUSG00000067768.13	novel	1200	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	104.319221622863	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	18	True	AATAAA	-18	NA	72257942	72266059	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_+_72258088_72258379_72258427_72258833_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138194	chrX	-	1487	8	NIC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	3	32	junction_2	570.329335577619	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-6	True	AATAAA	-18	NA	72308996	72298143	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_-_72299035_72299128_72299225_72302698_72302799_72303613_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138196	chrX	-	1636	10	NNC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-20	2	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_5	600.2778986066	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-6	True	AATAAA	-18	NA	72309016	72298143	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72303202_72303233_72303613_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138294	chrX	-	1188	8	NNC	ENSMUSG00000002015.6	novel	1219	8	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1020.94741914217	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTGTGTCTAACTGAG	NA	False	NA	-13	True	AATAAA	-17	NA	72759758	72729783	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_72730202_72731442_72731536_72732265_72732387_72733152_72733289_72750602_72750751_72756050_72756152_72758398_72758535_72759723
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138337	chrX	-	1478	11	NNC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	35	0	intron_retention	TRUE	canonical	0	0	junction_9	429.183131075768	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	-28	True	AATAAA	-19	NA	72830468	72822568	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826276_72826323_72830380
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138340	chrX	-	1555	11	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	32	0	intron_retention	FALSE	canonical	3	1072	junction_9	151.405416019375	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	-28	True	AATAAA	-19	NA	72830471	72822568	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_-_72822778_72823071_72823133_72823219_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138345	chrX	-	1291	12	NNC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	405.014090153837	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	-28	True	AATAAA	-19	NA	72830471	72822568	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_72822778_72823071_72823133_72823215_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138356	chrX	-	1292	12	NNC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	32	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	533.542333360347	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTGGCCCTGTTCTTCC	NA	False	NA	-31	True	AATAAA	-16	NA	72830471	72822571	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_72822778_72823071_72823133_72823215_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826276_72826323_72830380
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138400	chrX	+	1435	3	ISM	ENSMUSG00000002014.13	ENSMUST00000166518.8	800	6	-20	8	-20	5	intron_retention	FALSE	canonical	3	1181	junction_1	237.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATTCAAGACACGGGGC	5412	False	NA	38	True	AATAAA	-20	NA	72830613	72834422	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_+_72830913_72832440_72832560_72833405
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138452	chrX	-	1009	8	NIC	ENSMUSG00000031388.15	novel	1031	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	364.889359803707	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGGGTATGCTTTTTTT	NA	False	NA	-1	True	AATAAA	-38	NA	72965512	72960478	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_-_72960893_72961448_72961534_72963107_72963147_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138532	chrX	-	145	1	NIC	ENSMUSG00000031387.15	novel	1318	11	NA	NA	4136	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGCGCGCCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	72965871	72965726	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_-_72965700_72965900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138550	chrX	-	1799	4	FSM	ENSMUSG00000031393.17	ENSMUST00000100750.10	10538	4	47	8692	-10	4	multi-exon	FALSE	canonical	3	104	junction_3	52.083266666624	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGAGTTTCGTGGCTTCG	NA	False	NA	NA	False	AATAAA	-26	NA	73129228	73078889	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_73080101_73080587_73080939_73123514_73123639_73129115
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138604	chrX	+	837	6	ISM	ENSMUSG00000008682.14	ENSMUST00000008826.14	799	7	42	0	-3	0	intron_retention	FALSE	canonical	3	2920	junction_1	2571.44126123853	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	12	True	AATAAA	-22	NA	73314459	73316741	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_+_73314481_73314584_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138605	chrX	+	838	6	NIC	ENSMUSG00000008682.14	novel	799	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	2920	junction_1	2570.04695676947	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	12	True	AATAAA	-22	NA	73314459	73316741	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_+_73314481_73314584_73314631_73315265_73315514_73315784_73315924_73316277_73316441_73316520
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138615	chrX	+	858	6	NNC	ENSMUSG00000008682.14	novel	855	6	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_1	3823.36707105138	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	12	True	AATAAA	-22	NA	73314459	73316741	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_73314628_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138622	chrX	+	2006	2	FSM	ENSMUSG00000008682.14	ENSMUST00000146584.2	699	2	-983	-324	-3	-5	multi-exon	FALSE	canonical	3	9221	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGTTTTTGTTTCTGA	NA	False	NA	7	True	AATAAA	-17	NA	73314459	73316736	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_73315514_73315784
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138629	chrX	+	915	5	NIC	ENSMUSG00000008682.14	novel	799	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	2920	junction_1	2693.91131767547	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	12	True	AATAAA	-22	NA	73314462	73316741	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_+_73314481_73314584_73314631_73315265_73315514_73315784_73315924_73316277
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138649	chrX	+	862	6	NNC	ENSMUSG00000008682.14	novel	855	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	3699.23188783834	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	12	True	AATAAA	-22	NA	73314462	73316741	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316445_73316520
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138687	chrX	+	1068	3	FSM	ENSMUSG00000009995.18	ENSMUST00000156788.2	808	3	210	-470	210	0	multi-exon	FALSE	canonical	3	76	junction_1	92	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTCTGTGTAGGA	NA	False	NA	10	True	AATAAA	-23	NA	73332488	73333757	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_73332626_73332710_73332789_73332904
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138689	chrX	+	1153	2	ISM	ENSMUSG00000009995.18	ENSMUST00000176453.8	445	7	4946	-803	210	0	3prime_fragment	FALSE	canonical	3	260	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTCTGTGTAGGA	NA	False	NA	10	True	AATAAA	-23	NA	73332488	73333757	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_+_73332789_73332904
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138695	chrX	+	2187	10	FSM	ENSMUSG00000019087.14	ENSMUST00000019231.12	2189	10	-8	10	-8	-10	multi-exon	TRUE	canonical	3	647	junction_4	26.5934179176579	573	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGCACTGAACAGTAGA	NA	False	NA	36	True	AATAAA	-41	NA	73340694	73348317	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138719	chrX	+	1907	4	FSM	ENSMUSG00000015291.11	ENSMUST00000137447.8	633	4	-348	-926	343	0	multi-exon	FALSE	canonical	3	748	junction_3	34.7211110933328	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTCTTTAGGTTCTC	NA	False	NA	15	True	AATAAA	-16	NA	73353109	73355468	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_73353741_73353995_73354141_73354243_73354299_73354392
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138725	chrX	+	1431	13	FSM	ENSMUSG00000001962.9	ENSMUST00000114160.2	1383	13	-39	-9	-39	9	multi-exon	FALSE	canonical	3	663	junction_3	69.864700592566	768	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCGCTTTATTTTATAGC	160	False	NA	NA	False	AATAAA	-42	NA	73356599	73363764	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_73356932_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361242_73361310_73361747_73361810_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138747	chrX	-	848	3	FSM	ENSMUSG00000015289.5	ENSMUST00000015433.4	761	3	-72	-15	-72	15	multi-exon	FALSE	canonical	3	1433	junction_2	31	10381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTGGTTTTTATTTT	4421	False	NA	-3	True	AATAAA	-45	NA	73397296	73395751	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_73396105_73396479_73396609_73396930
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138763	chrX	-	761	3	NNC	ENSMUSG00000015289.5	novel	761	3	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	716.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGCCTCTAAATTTTC	4497	False	NA	-18	True	AATAAA	-30	NA	73397220	73395766	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_73396105_73396475_73396609_73396930
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138784	chrX	-	448	1	Genic_Genomic	ENSMUSG00000015290.16	novel	NA	NA	NA	NA	2309	8	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTGTAATATTTGGGTT	NA	False	NA	2	True	AATAAA	-28	NA	73409763	73409315	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_-_73409300_73409800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138787	chrX	-	2357	4	FSM	ENSMUSG00000015290.16	ENSMUST00000155676.8	2442	4	93	-8	-22	8	multi-exon	FALSE	canonical	3	1598	junction_1	83.5636816379513	5778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTGTAATATTTGGGTT	NA	False	NA	2	True	AATAAA	-28	NA	73412186	73409315	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_73411193_73411306_73411516_73411758_73411865_73412021
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138823	chrX	-	2413	13	FSM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	239	0	-75	0	multi-exon	FALSE	canonical	3	267	junction_8	19.8990507869653	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCCTTGTTCTTTTC	NA	False	NA	-6	True	ATTAAA	-18	NA	73472561	73453088	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73472428
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138853	chrX	-	241	1	FSM	ENSMUSG00000080777.2	ENSMUST00000122392.2	300	1	288	-229	288	229	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATGGATTTCCGTTTGT	NA	False	NA	NA	False	TATAAA	-19	NA	73757119	73756878	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_73756900_73757100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138866	chrX	-	536	1	Genic_Genomic	ENSMUSG00000032750.14	novel	NA	NA	NA	NA	1750	3	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTTCTTAGTTTTTTTT	3929	False	NA	NA	False	ATTAAA	-23	NA	74010981	74010445	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_-_74010400_74011000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138870	chrX	+	2754	15	FSM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	57	-7	57	7	multi-exon	FALSE	canonical	3	1536	junction_9	499.509294922813	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTCCTTTGGCTAC	NA	False	NA	41	True	ATTAAA	-28	NA	74139516	74153390	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138894	chrX	+	1834	6	ISM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	8283	0	-1812	0	3prime_fragment	FALSE	canonical	3	2464	junction_5	150.861525910353	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	34	True	ATTAAA	-21	NA	74147742	74153383	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_+_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138900	chrX	+	1090	1	Genic_Genomic	ENSMUSG00000031403.15	novel	NA	NA	NA	NA	2746	7	mono-exon	FALSE	NA	NA	NA	NA	NA	661	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTCCTTTGGCTAC	NA	False	NA	41	True	ATTAAA	-28	NA	74152300	74153390	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_+_74152300_74153400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138911	chrX	-	267	1	NIC	ENSMUSG00000031402.13	novel	2525	12	NA	NA	4182	165	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCTGATTTCAGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	74157272	74157005	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_-_74157000_74157300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138937	chrX	-	977	3	FSM	ENSMUSG00000090110.9	ENSMUST00000033543.14	992	3	15	0	15	0	multi-exon	FALSE	canonical	3	61	junction_2	10	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTTGTTACTAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	74460156	74448451	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_74448825_74453151_74453220_74459620
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138947	chrX	+	1133	7	FSM	ENSMUSG00000031201.18	ENSMUST00000124321.2	2614	7	1487	-6	1487	6	multi-exon	FALSE	canonical	3	239	junction_6	326.313584693551	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTAACATTGTCACTAC	NA	False	NA	NA	False	NA	NA	NA	74479070	74494836	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138955	chrX	-	776	1	FSM	ENSMUSG00000048709.7	ENSMUST00000117517.2	292	1	-133	-351	-133	351	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTCTCAGTCGTGCA	NA	False	NA	NA	False	ATTAAA	-7	NA	74519262	74518486	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_74518500_74519300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138958	chrX	+	1629	6	FSM	ENSMUSG00000031197.12	ENSMUST00000033540.6	1595	6	-24	-10	-24	10	multi-exon	FALSE	canonical	3	1794	junction_5	66.7580706731403	6032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCATTTTAATCTTTG	NA	False	NA	24	True	ATTAAA	-30	NA	74557880	74578558	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566965_74574690_74574830_74577513
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138982	chrX	+	1551	6	NNC	ENSMUSG00000031197.12	novel	1595	6	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	751.60777005031	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGCCTGACAATTTTT	NA	False	NA	9	True	ATTAAA	-15	NA	74557933	74578543	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_74558035_74560704_74560820_74564968_74565036_74566865_74566965_74574690_74574830_74577513
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138985	chrX	+	1570	6	NNC	ENSMUSG00000031197.12	novel	1595	6	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	760.311252054052	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGCCTGACAATTTTT	NA	False	NA	9	True	ATTAAA	-15	NA	74557933	74578543	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566965_74574690_74574830_74577504
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138989	chrX	+	1116	5	NNC	ENSMUSG00000031197.12	novel	1595	6	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	808.863515990182	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGCCTGACAATTTTT	NA	False	NA	9	True	ATTAAA	-15	NA	74557933	74578543	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566965_74577819
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000138990	chrX	+	1556	6	NNC	ENSMUSG00000031197.12	novel	1595	6	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	760.710299654211	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGACAATTTTTTCATT	NA	False	NA	14	True	ATTAAA	-20	NA	74557933	74578548	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566965_74574690_74574830_74577523
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139002	chrX	+	1558	6	NNC	ENSMUSG00000031197.12	novel	1595	6	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	753.262132328448	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGACAATTTTTTCATT	NA	False	NA	14	True	ATTAAA	-20	NA	74557933	74578548	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_74558035_74560694_74560820_74564976_74565036_74566865_74566965_74574690_74574830_74577513
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139026	chrX	-	3122	16	FSM	ENSMUSG00000016382.16	ENSMUST00000114059.10	3149	16	18	9	18	0	multi-exon	FALSE	canonical	3	263	junction_13	28.3953047762008	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTCTACTCTCTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	74918770	74829268	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_74830506_74834567_74834693_74834890_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74918653
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139034	chrX	+	1538	1	Genic_Genomic	ENSMUSG00000025246.14	novel	NA	NA	NA	NA	150237	5	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGACTGTGTTTTTCT	NA	False	NA	17	True	AATAAA	-25	NA	76705056	76706594	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_+_76705100_76706600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139045	chrX	+	524	1	FSM	ENSMUSG00000081049.2	ENSMUST00000118723.2	402	1	-31	-91	-31	91	mono-exon	FALSE	NA	NA	NA	NA	NA	591	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGGGAAATCTCTATCC	NA	False	NA	NA	False	NA	NA	NA	78238621	78239145	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_78238600_78239100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139053	chrX	-	1311	1	ISM	ENSMUSG00000046942.18	ENSMUST00000114016.10	1725	3	11041	0	11041	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCTCTCTTTTATTAC	NA	False	NA	0	True	AATAAA	-22	NA	78668147	78666836	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_-_78666800_78668100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139058	chrX	-	1950	4	FSM	ENSMUSG00000046942.18	ENSMUST00000052283.7	1854	4	-96	0	-96	0	multi-exon	FALSE	canonical	3	76	junction_2	116.448367194316	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCTCTCTTTTATTAC	NA	False	NA	0	True	AATAAA	-22	NA	78715137	78666836	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_78668390_78671446_78671527_78685326_78685395_78714888
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139060	chrX	-	1729	3	NNC	ENSMUSG00000046942.18	novel	1725	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	120.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCTCTCTTTTATTAC	NA	False	NA	0	True	AATAAA	-22	NA	78679188	78666836	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_78668390_78671442_78671527_78679096
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139069	chrX	+	1889	1	FSM	ENSMUSG00000081205.5	ENSMUST00000117582.2	1068	1	-57	-764	-57	764	mono-exon	FALSE	NA	NA	NA	NA	NA	283	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAATGGTCAACATGTAG	NA	False	NA	NA	False	AAAAAG	-35	NA	79500290	79502179	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_79500300_79502200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139114	chrX	+	719	2	NNC	ENSMUSG00000025056.5	novel	1808	2	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	0	23	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACTGGAGAGTTTTCTTG	NA	False	NA	11	True	AATAAA	-23	NA	85235377	85239553	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_85235500_85238956
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139131	chrX	-	1617	2	Genic_Genomic	ENSMUSG00000082450.2	novel	1041	1	NA	NA	-1854	414	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGAGTTGGATTTCTCG	NA	False	NA	NA	False	ATTAAA	-20	NA	85444704	85441395	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_-_85442910_85444601
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139135	chrX	+	688	2	Intergenic	novelGene_481	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	47	junction_1	0	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTTGTGGTATTTCA	NA	False	NA	20	True	NA	NA	NA	88051955	88080617	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrX_+_88052327_88080300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139143	chrX	+	185	1	Intergenic	novelGene_482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTAAAGTTCTTGCTAAC	NA	False	NA	NA	False	NA	NA	NA	91894820	91895005	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrX_+_91894800_91895000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139165	chrX	+	2031	1	ISM	ENSMUSG00000035246.17	ENSMUST00000113933.9	4867	8	93058	0	16359	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTTGCCTTGTTTATT	NA	False	NA	4	True	AATAAA	-17	NA	92791526	92793557	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_+_92791500_92793600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139193	chrX	+	1148	5	NIC	ENSMUSG00000043929.17	novel	627	4	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	18.9868375460475	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCAGCCTGGCATGTTT	NA	False	NA	NA	False	AATAAA	-24	NA	93278202	93297673	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_+_93278260_93278826_93279027_93285550_93285602_93296020_93296733_93297545
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139209	chrX	+	807	8	ISM	ENSMUSG00000079508.9	ENSMUST00000113898.8	784	9	4	4289	4	-4289	5prime_fragment	FALSE	canonical	3	325	junction_1	49.0588983794386	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCATGTTTATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	93410726	93456278	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_+_93410769_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139238	chrX	+	2476	1	FSM	ENSMUSG00000071723.8	ENSMUST00000096368.4	2491	1	8	7	1	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTGAAATGTGTTTGAA	4264	False	NA	15	True	AATAAA	-21	NA	93679682	93682158	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_93679700_93682200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139267	chrX	+	351	1	Genic_Genomic	ENSMUSG00000031207.17	novel	NA	NA	NA	NA	72106	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGACTCAGTCTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	95211808	95212159	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_+_95211800_95212200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139272	chrX	+	660	1	FSM	ENSMUSG00000082035.2	ENSMUST00000118924.2	621	1	-7	-32	-7	32	mono-exon	FALSE	NA	NA	NA	NA	NA	500	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGAAAAATATCATTCCT	NA	False	NA	NA	False	GATAAA	-36	NA	95528457	95529117	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_95528500_95529100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139307	chrX	-	2583	2	FSM	ENSMUSG00000034403.17	ENSMUST00000036354.7	2563	2	-16	-4	-16	4	multi-exon	FALSE	canonical	3	84	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGCATCATTTGGATTT	NA	False	NA	0	True	ATTAAA	-26	NA	98514314	98509715	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_98512207_98514222
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139315	chrX	-	301	1	Intergenic	novelGene_483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTCTGTGGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	98952308	98952007	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrX_-_98952000_98952300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139384	chrX	-	2408	13	FSM	ENSMUSG00000031297.15	ENSMUST00000101362.8	2371	13	-20	-17	0	6	multi-exon	FALSE	canonical	3	84	junction_12	497.596780089618	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128978	100122809	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128426_100128585_100128877
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139434	chrX	-	885	5	NIC	ENSMUSG00000031310.17	novel	1859	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	54.2332923581079	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCAGCCTCTCCTTCCCC	NA	False	NA	0	True	NA	NA	NA	100463415	100458534	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_-_100459013_100459366_100459545_100460514_100460588_100460892_100460937_100463303
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139439	chrX	-	535	1	NIC	ENSMUSG00000031310.17	novel	5178	24	NA	NA	-297	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCAGCCTCTCCTTCCCC	NA	False	NA	0	True	NA	NA	NA	100459069	100458534	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_-_100458500_100459100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139507	chrX	+	1323	5	ISM	ENSMUSG00000034160.14	ENSMUST00000119299.8	3840	23	-16	30045	-16	1	5prime_fragment	FALSE	canonical	3	98	junction_1	113.781589020368	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAAGGACAAAGCTGGTT	NA	False	NA	NA	False	AAAAAG	-1	NA	100683649	100696501	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_+_100683717_100683823_100683929_100686611_100686763_100687552_100687797_100695745
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139535	chrX	-	2610	5	NIC	ENSMUSG00000045010.15	novel	1991	6	NA	NA	-22	7	intron_retention	FALSE	canonical	3	142	junction_4	69.9052930757035	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCAACTGTTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	100838051	100833946	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_-_100834130_100834212_100834891_100835166_100835250_100835786_100835944_100836542
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139586	chrX	+	577	5	NNC	ENSMUSG00000079480.4	novel	489	4	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	571.057571528476	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTGTTTTCTATTTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	101163117	101171275	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_101163171_101164975_101165129_101165273_101165348_101170622_101170743_101171098
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139593	chrX	+	202	1	Intergenic	novelGene_484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTACAGACTCAACTTTCC	NA	False	NA	NA	False	NA	NA	NA	101174717	101174919	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrX_+_101174700_101174900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139623	chrX	-	877	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	2	183	junction_1	5802.75955664391	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTGCTGTTGCTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	101232931	101228546	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_101228709_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231609_101231899_101231978_101232903
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139633	chrX	-	938	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6060.87327774545	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTGCTGTTGCTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	101232959	101228546	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231423_101231609_101231899_101231978_101232903
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139636	chrX	-	888	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5950.03962638532	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTGCTGTTGCTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	101232929	101228546	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231609_101231915_101231978_101232903
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139645	chrX	-	888	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6005.39401057268	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTGCTGTTGCTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	101232929	101228546	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_101228738_101229108_101229267_101230001_101230154_101230956_101231059_101231427_101231609_101231899_101231978_101232903
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139664	chrX	-	913	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5950.03962638532	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTGCTGTTGCTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	101232929	101228546	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231609_101231890_101231978_101232903
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139697	chrX	-	895	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7305.27209167005	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTTTGCTGTTGCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	101232929	101228547	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_101228738_101229108_101229267_101230001_101230168_101230956_101231059_101231427_101231609_101231905_101231978_101232903
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139698	chrX	-	907	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5867.28973964035	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTTTGCTGTTGCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	101232929	101228547	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_101228738_101229104_101229267_101230001_101230174_101230960_101231059_101231427_101231609_101231899_101231978_101232903
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139706	chrX	-	901	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7305.27209167005	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTTTGCTGTTGCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	101232929	101228547	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230956_101231059_101231427_101231609_101231905_101231978_101232903
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139708	chrX	-	838	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_5	5946.87781996196	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTTTGCTGTTGCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	101232929	101228547	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231544_101231899_101231978_101232903
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139720	chrX	-	893	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6005.39401057268	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTTTGCTGTTGCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	101232929	101228547	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_101228738_101229108_101229267_101230001_101230158_101230954_101231059_101231427_101231609_101231899_101231978_101232903
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139726	chrX	-	875	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6005.39401057268	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTTTGCTGTTGCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	101232929	101228547	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_101228738_101229108_101229267_101230001_101230140_101230954_101231059_101231427_101231609_101231899_101231978_101232903
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139731	chrX	-	873	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	5947.93173202996	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTTTGCTGTTGCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	101232929	101228547	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231579_101231899_101231978_101232903
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139756	chrX	-	1272	6	NIC	ENSMUSG00000031320.10	novel	975	7	NA	NA	13	-1	intron_retention	FALSE	canonical	3	11043	junction_5	2209.1086528281	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTTTGCTGTTGCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	101232929	101228547	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231609_101231899_101231978_101232903
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139816	chrX	-	111	1	Genic_Genomic	ENSMUSG00000067567.13	novel	NA	NA	NA	NA	219993	1	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGTCCCACCGCTCTGTT	4172	False	NA	0	True	AATAAA	-16	NA	101328354	101328243	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_-_101328200_101328400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139818	chrX	-	1724	11	FSM	ENSMUSG00000067567.13	ENSMUST00000087916.11	1936	11	213	-1	0	1	multi-exon	FALSE	canonical	3	41	junction_1	12.0747670784989	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGTCCCACCGCTCTGTT	NA	False	NA	0	True	AATAAA	-16	NA	101548752	101328243	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_101328775_101351244_101351351_101446190_101446286_101449142_101449316_101471720_101471830_101472369_101472448_101476090_101476204_101541736_101541879_101543427_101543559_101548004_101548058_101548559
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139822	chrX	-	793	6	NNC	ENSMUSG00000067567.13	novel	686	7	NA	NA	72144	47575	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	22.049036260118	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAGAATACAATTACTAG	NA	False	NA	NA	False	AATAAA	-14	NA	101476203	101401677	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_101401903_101446190_101446286_101449142_101449316_101471720_101471830_101472369_101472448_101476090
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139859	chrX	+	1590	9	NNC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	33	8	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_2	58.9597320211006	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	101846601	101853556	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_101846761_101846861_101847056_101848305_101848480_101848622_101848775_101849096_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139863	chrX	+	406	1	Genic_Genomic	ENSMUSG00000067562.12	novel	NA	NA	NA	NA	5322	8	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	3766	False	NA	NA	False	AATAAA	-20	NA	101853150	101853556	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_+_101853200_101853600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139866	chrX	-	406	1	Genic_Genomic	ENSMUSG00000067561.13	novel	NA	NA	NA	NA	5320	8	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	101891642	101891236	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_-_101891200_101891600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139869	chrX	-	1476	8	NNC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	-19	8	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_7	44.1518714790442	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	101898241	101891236	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311_101896486_101898002
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139879	chrX	-	301	2	Intergenic	novelGene_485	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGACTGCTTCTCATG	NA	False	NA	NA	False	NA	NA	NA	102173085	102170124	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrX_-_102170250_102172909
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139889	chrX	+	1098	3	Genic_Genomic	ENSMUSG00000081280.2_ENSMUSG00000082746.2_ENSMUSG00000083502.2	novel	401	1	NA	NA	-4	31	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTCTTCGAGGTGTAG	NA	False	NA	NA	False	AATAAA	-33	NA	102380431	102533554	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_+_102380637_102530750_102531078_102532988
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139907	chrX	+	1139	2	Genic_Genomic	ENSMUSG00000082746.2_ENSMUSG00000083502.2	novel	455	1	NA	NA	-35	31	multi-exon	FALSE	canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTCTTCGAGGTGTAG	NA	False	NA	NA	False	AATAAA	-33	NA	102530504	102533554	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_+_102531078_102532988
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139916	chrX	+	194	1	Intergenic	novelGene_486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAGATCCCTTAGCAT	NA	False	NA	NA	False	NA	NA	NA	102973836	102974030	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrX_+_102973800_102974000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139942	chrX	+	177	1	Intergenic	novelGene_487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAATTCATGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	103467553	103467730	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrX_+_103467600_103467700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139945	chrX	-	750	1	ISM	ENSMUSG00000033906.6	ENSMUST00000042070.6	5509	12	133346	0	133346	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGTGTCTTTTCTATA	NA	False	NA	NA	False	ATTAAA	-15	NA	103581324	103580574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_-_103580600_103581300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139951	chrX	+	490	3	Antisense	novelGene_ENSMUSG00000033906.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGAGTCGCCTTAGTC	8468	False	NA	NA	False	NA	NA	NA	103714509	103759716	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chrX_+_103714618_103724291_103724365_103759407
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139962	chrX	-	771	6	FSM	ENSMUSG00000087174.8	ENSMUST00000144366.8	709	6	-59	-3	-6	3	multi-exon	FALSE	canonical	3	37	junction_3	33.8904116233486	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGATTTACATGTAGTT	NA	False	NA	0	True	AATAAA	-20	NA	104113720	104087405	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_104087718_104091514_104091617_104110364_104110484_104112176_104112235_104113216_104113282_104113605
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139972	chrX	-	529	4	ISM	ENSMUSG00000087174.8	ENSMUST00000147478.8	311	5	-53	532	0	0	5prime_fragment	FALSE	canonical	3	5	junction_1	55.1180551180827	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTGGATTTACATGTA	NA	False	NA	-3	True	AATAAA	-17	NA	104113702	104087408	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_-_104087718_104112176_104112235_104113216_104113282_104113605
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000139973	chrX	-	815	6	FSM	ENSMUSG00000087174.8	ENSMUST00000146227.8	531	6	-11	-273	5	0	multi-exon	FALSE	canonical	3	8	junction_5	40.4899987651272	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTGGATTTACATGTA	NA	False	NA	-3	True	AATAAA	-17	NA	104113725	104087408	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_104087718_104091514_104091617_104110364_104110484_104112069_104112235_104113216_104113282_104113670
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140008	chrX	+	377	2	NNC	ENSMUSG00000031226.14	novel	1239	6	NA	NA	36538	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGCCAGAGTTCCTTTT	NA	False	NA	5	True	AATAAA	-20	NA	104159918	104160696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_104160032_104160432
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140011	chrX	+	467	1	FSM	ENSMUSG00000031227.9	ENSMUST00000033578.7	3550	1	3068	15	3068	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGCTAATCCACTAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	104167051	104167518	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_104167100_104167500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140016	chrX	-	868	1	ISM	ENSMUSG00000031229.17	ENSMUST00000113573.8	10275	35	130921	0	3568	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104842088	104841220	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_-_104841200_104842100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140038	chrX	+	508	3	NNC	ENSMUSG00000031231.5	novel	1001	3	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3862	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTAGGCTTTGTTTTTTTC	NA	False	NA	12	True	AATAAA	-24	NA	105059310	105065564	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_105059477_105063184_105063314_105065351
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140053	chrX	+	584	4	NNC	ENSMUSG00000031231.5	novel	1001	3	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	4409.17596231616	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTAGGCTTTGTTTTTTTC	NA	False	NA	12	True	AATAAA	-24	NA	105059348	105065564	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_105059477_105059710_105059829_105063184_105063310_105065351
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140054	chrX	+	452	3	NNC	ENSMUSG00000031231.5	novel	1001	3	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4713.5	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTAGGCTTTGTTTTTTTC	NA	False	NA	12	True	AATAAA	-24	NA	105059348	105065564	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_105059477_105063198_105063310_105065351
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140118	chrX	-	1373	1	ISM	ENSMUSG00000031245.9	ENSMUST00000033597.9	1934	6	7498	0	7498	0	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTTTGCAATATTTCA	NA	False	NA	1	True	AATAAA	-19	NA	108049512	108048139	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_-_108048100_108049500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140120	chrX	-	2010	6	FSM	ENSMUSG00000031245.9	ENSMUST00000033597.9	1934	6	-76	0	-76	0	multi-exon	FALSE	canonical	0	0	junction_3	41.3424721079908	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTTTGCAATATTTCA	NA	False	NA	1	True	AATAAA	-19	NA	108057086	108048139	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_108049678_108051767_108051903_108054159_108054214_108054462_108054493_108055027_108055052_108056857
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140137	chrX	+	980	9	NNC	ENSMUSG00000025525.13	novel	1359	9	NA	NA	20	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	138.599636994474	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGTGGTAAAATCATAAAT	NA	False	NA	10	True	AATAAA	-18	NA	111221082	111282129	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_111221134_111243497_111243603_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274162_111274268_111281890
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140154	chrX	+	925	3	NNC	ENSMUSG00000050435.3	novel	743	2	NA	NA	-7230	3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	13	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCATTTTTTTTTTCTT	NA	False	NA	4	True	AATAAA	-19	NA	113807478	113815641	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_113807624_113814674_113814900_113815086
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140183	chrX	-	196	1	Intergenic	novelGene_488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAGCATACAGGTGAAGG	NA	False	NA	NA	False	NA	NA	NA	128660521	128660325	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrX_-_128660300_128660500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140201	chrX	+	298	1	Genic_Genomic	ENSMUSG00000031256.12	novel	NA	NA	NA	NA	9311	6	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGCTTTTTAAAAAATG	NA	False	NA	10	True	AATAAA	-25	NA	132976320	132976618	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_+_132976300_132976600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140208	chrX	-	925	5	ISM	ENSMUSG00000067369.13	ENSMUST00000145066.2	3237	12	-20	39387	-20	5	5prime_fragment	TRUE	canonical	3	42	junction_1	5.7227615711298	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCCGCATTGTCAT	NA	False	NA	-2	True	AGTAAA	-19	NA	133177696	133163231	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_-_133163634_133164475_133164611_133167009_133167065_133168079_133168311_133177594
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140218	chrX	+	212	1	Intergenic	novelGene_489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGTCTCACTAGCTGGTC	NA	False	NA	NA	False	NA	NA	NA	133206912	133207124	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrX_+_133206900_133207100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140249	chrX	+	485	5	NNC	ENSMUSG00000079435.10	novel	483	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5556.20547226252	115	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTCTCCTGTTGAGTGG	NA	False	NA	81	True	ATTAAA	-22	NA	133486399	133488811	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_133486469_133486826_133486933_133487259_133487328_133488199_133488323_133488692
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140259	chrX	+	473	5	NNC	ENSMUSG00000079435.10	novel	483	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5286.05620358883	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAAGTTTTTCTCCTGTT	NA	False	NA	75	True	ATTAAA	-16	NA	133486404	133488805	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_133486469_133486826_133486933_133487259_133487320_133488199_133488323_133488685
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140283	chrX	+	414	5	NNC	ENSMUSG00000079435.10	novel	483	5	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	1	127	junction_3	5232.68370437197	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTTGATTGCAGTTGTT	NA	False	NA	17	True	AATAAA	-16	NA	133486434	133488747	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_133486469_133486826_133486933_133487259_133487349_133488199_133488323_133488685
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140293	chrX	+	508	5	NNC	ENSMUSG00000079435.10	novel	483	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	5500.69981911393	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAAGTTTTTCTCCTGTT	NA	False	NA	75	True	ATTAAA	-16	NA	133486434	133488805	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_133486469_133486769_133486933_133487259_133487328_133488199_133488323_133488685
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140306	chrX	+	683	3	NIC	ENSMUSG00000079435.10	novel	812	4	NA	NA	-3	2	intron_retention	FALSE	canonical	3	427	junction_1	5002	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTTGATTGCAGTTGTT	NA	False	NA	17	True	AATAAA	-16	NA	133486434	133488747	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_+_133486933_133488199_133488323_133488685
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140314	chrX	+	454	5	NNC	ENSMUSG00000079435.10	novel	483	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5501.54335164234	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAAGTTTTTCTCCTGTT	NA	False	NA	75	True	ATTAAA	-16	NA	133486436	133488805	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_133486474_133486826_133486933_133487259_133487328_133488199_133488323_133488685
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140335	chrX	+	1456	1	ISM	ENSMUSG00000045427.14	ENSMUST00000113203.2	2315	2	4380	0	4319	0	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATAGTTTGATTTTC	NA	False	NA	NA	False	AATAAA	-25	NA	133506353	133507809	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_+_133506400_133507800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140345	chrX	+	2166	4	FSM	ENSMUSG00000033460.15	ENSMUST00000113198.8	2085	4	-63	-18	-13	9	multi-exon	FALSE	canonical	3	131	junction_3	26.0895892391327	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCCTTGGGTTCAGGATC	NA	False	NA	NA	False	AATAAA	-36	NA	133618698	133622675	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_133618800_133619668_133619742_133620375_133620475_133620782
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140346	chrX	+	2125	4	NNC	ENSMUSG00000033460.15	novel	2179	5	NA	NA	-13	9	at_least_one_novel_splicesite	FALSE	canonical	3	112	junction_3	34.8839345385363	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCCTTGGGTTCAGGATC	NA	False	NA	NA	False	AATAAA	-36	NA	133618698	133622675	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_133618800_133619668_133619742_133620375_133620475_133620823
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140358	chrX	+	1464	1	ISM	ENSMUSG00000033460.15	ENSMUST00000051256.10	2253	4	2484	0	1197	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	AATAAA	-27	NA	133621202	133622666	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_+_133621200_133622700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140366	chrX	-	728	1	ISM	ENSMUSG00000033436.14	ENSMUST00000119010.8	3007	3	2653	0	2639	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTGTTCTGGTGCTTTA	NA	False	NA	-1	True	AATAAA	-21	NA	133705621	133704893	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_-_133704900_133705600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140379	chrX	-	412	4	NIC	ENSMUSG00000060726.11	novel	544	5	NA	NA	39	-7	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	6.59966329107444	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGGTTTTGGGCTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	134625971	134619422	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_-_134619503_134620414_134620520_134624106_134624186_134625823
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140403	chrX	+	2815	5	NNC	ENSMUSG00000072964.15	novel	2823	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.3168517134365	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTTTGTGTATATGA	NA	False	NA	10	True	AATAAA	-21	NA	134786603	134791830	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_134786841_134787593_134787676_134788009_134788067_134789120_134789229_134789499
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140417	chrX	+	1606	1	FSM	ENSMUSG00000048355.3	ENSMUST00000057625.3	1580	1	-24	-2	-24	2	mono-exon	FALSE	NA	NA	NA	NA	NA	295	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGCTTCCTTTATAG	NA	False	NA	24	True	AATAGA	-18	NA	134934091	134935697	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_134934100_134935700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140424	chrX	-	646	1	NIC	ENSMUSG00000042750.8	novel	903	3	NA	NA	1027	0	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGTAGTTCTTTAAAGG	5183	False	NA	0	True	AATAAA	-18	NA	134967958	134967312	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_-_134967300_134968000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140429	chrX	-	818	3	NNC	ENSMUSG00000042750.8	novel	903	3	NA	NA	80	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	450.5	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTAGTAGTTCTTTAAA	4236	False	NA	-2	True	AATAAA	-16	NA	134968905	134967314	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_134967954_134968348_134968422_134968799
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140452	chrX	+	778	3	NNC	ENSMUSG00000047844.4	novel	837	3	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1184.5	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCTCAGTCATCTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	135039793	135041192	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_135039916_135040281_135040349_135040603
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140453	chrX	+	1003	4	NNC	ENSMUSG00000047844.4	novel	837	3	NA	NA	49	1772	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	1755.6340418461	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTCAGAGTAAGAATTCC	NA	False	NA	NA	False	NA	NA	NA	135039793	135042964	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_135039916_135040271_135040349_135040603_135040897_135042453
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140464	chrX	+	1042	2	ISM	ENSMUSG00000047844.4	ENSMUST00000116527.2	837	3	50	0	50	0	intron_retention	FALSE	canonical	3	4297	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCTCAGTCATCTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	135039794	135041192	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_+_135039916_135040271
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140489	chrX	-	973	1	NIC	ENSMUSG00000051579.11	novel	2358	4	NA	NA	1150	2	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTAAGACTTGGTCTT	NA	False	NA	NA	False	NA	NA	NA	135071800	135070827	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_-_135070800_135071800
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140498	chrX	-	305	1	ISM	ENSMUSG00000054034.11	ENSMUST00000066819.11	1044	3	2624	0	2385	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCAGTATCAGTCCATTT	NA	False	NA	NA	False	NA	NA	NA	135102001	135101696	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_-_135101700_135102000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140524	chrX	-	800	3	NNC	ENSMUSG00000050071.9	novel	866	3	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2886	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTACTCATCTTTTC	NA	False	NA	-2	True	AATAAA	-17	NA	135116207	135114720	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_135115322_135115652_135115730_135116085
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140530	chrX	-	812	3	NNC	ENSMUSG00000050071.9	novel	866	3	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2886	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTACTCATCTTTTC	NA	False	NA	-2	True	AATAAA	-17	NA	135116207	135114720	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_135115330_135115648_135115730_135116085
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140536	chrX	-	782	2	NNC	ENSMUSG00000050071.9	novel	866	3	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTACTCATCTTTTC	NA	False	NA	-2	True	AATAAA	-17	NA	135116207	135114720	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_135115333_135116037
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140541	chrX	-	795	3	NNC	ENSMUSG00000050071.9	novel	866	3	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2886	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTACTCATCTTTTC	NA	False	NA	-2	True	AATAAA	-17	NA	135116207	135114720	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_135115333_135115668_135115730_135116085
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140555	chrX	-	804	3	NNC	ENSMUSG00000050071.9	novel	866	3	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2297.5	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTACTCATCTTTTC	NA	False	NA	-2	True	AATAAA	-17	NA	135116207	135114720	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_135115333_135115652_135115723_135116085
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140567	chrX	-	1130	2	FSM	ENSMUSG00000050071.9	ENSMUST00000142172.2	481	2	-77	-572	-14	0	multi-exon	FALSE	canonical	3	5772	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTACTCATCTTTTC	NA	False	NA	-2	True	AATAAA	-17	NA	135116206	135114720	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_135115730_135116085
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140580	chrX	+	1039	3	NNC	ENSMUSG00000042712.11	novel	1019	3	NA	NA	-11	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1366	1021	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCCATCAATTTATTTTT	NA	False	NA	13	True	AATAAA	-29	NA	135145816	135147893	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_135145981_135146449_135146516_135147084
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140591	chrX	+	1014	3	NNC	ENSMUSG00000042712.11	novel	1019	3	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	1397	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGCCCATCAATTTATT	NA	False	NA	10	True	AATAAA	-26	NA	135145830	135147890	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_135145977_135146449_135146516_135147088
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140648	chrX	+	818	3	NNC	ENSMUSG00000046432.13	novel	930	3	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2536.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTGTCCTTAAAGCAT	NA	False	NA	NA	False	AATAAA	-16	NA	135171072	135172669	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_135171151_135171558_135171641_135172011
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140663	chrX	+	632	1	ISM	ENSMUSG00000049536.6	ENSMUST00000055104.6	2803	2	1260	1605	1260	-1605	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATGTTTCTTCTGAATC	NA	False	NA	NA	False	AATAAA	-25	NA	135609990	135610622	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_+_135610000_135610600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140670	chrX	-	1821	4	FSM	ENSMUSG00000031422.17	ENSMUST00000113097.8	1825	4	4	0	0	0	multi-exon	TRUE	canonical	3	47	junction_3	1449.75867723639	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	135644435	135633690	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135644341
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140672	chrX	-	1800	4	NNC	ENSMUSG00000031422.17	novel	1859	4	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1484.46091973559	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	135642033	135633690	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_135635251_135636296_135636372_135640553_135640644_135641958
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140673	chrX	-	1793	4	NNC	ENSMUSG00000031422.17	novel	1996	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1471.73797486736	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	135642027	135633690	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_135635251_135636294_135636372_135640553_135640633_135641950
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140686	chrX	-	358	3	NNC	ENSMUSG00000031422.17	novel	1996	4	NA	NA	-3	-3782	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	1468.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTTTTAATTAATATT	NA	False	NA	NA	False	AATAAA	-17	NA	135642028	135640128	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_135640327_135640553_135640644_135641958
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140693	chrX	-	736	3	FSM	ENSMUSG00000089996.7	ENSMUST00000069803.5	450	3	-9	-277	-9	277	multi-exon	FALSE	canonical	3	182	junction_2	19	881	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTGAGCAGATTGCACA	NA	False	NA	NA	False	AATAAA	-17	NA	135858783	135855736	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_135856232_135857483_135857589_135858647
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140703	chrX	-	451	3	Fusion	ENSMUSG00000089768.3_ENSMUSG00000089996.7	novel	450	3	NA	NA	-12	0	multi-exon	FALSE	canonical	3	57	junction_2	81.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTAACTTCCTTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	135877635	135856013	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Fusion_chrX_-_135856232_135857483_135857589_135877507
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140720	chrX	-	1334	4	FSM	ENSMUSG00000023443.14	ENSMUST00000113066.9	1692	4	358	0	358	0	multi-exon	FALSE	canonical	3	42	junction_3	6.23609564462324	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGCTTTGAGAGTTATA	NA	False	NA	-1	True	AATAAA	-18	NA	136020562	136016145	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_136016755_136018006_136018053_136019115_136019552_136020319
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140722	chrX	-	1407	5	FSM	ENSMUSG00000023443.14	ENSMUST00000074698.3	1600	5	193	0	38	0	multi-exon	FALSE	canonical	3	9	junction_4	18.0052075800308	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGCTTTGAGAGTTATA	NA	False	NA	-1	True	AATAAA	-18	NA	136020882	136016145	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_136016755_136018006_136018053_136019115_136019552_136020319_136020446_136020692
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140758	chrX	+	231	1	Genic_Genomic	ENSMUSG00000051257.4	novel	NA	NA	NA	NA	4258	2	mono-exon	FALSE	NA	NA	NA	NA	NA	270	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTCACGTTAACGTCA	NA	False	NA	22	True	AATAAA	-23	NA	138238689	138238920	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_+_138238700_138238900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140788	chrX	-	1747	8	NIC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	-17	3	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	199.257704124737	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTGAACTGGGTTTTTG	NA	False	NA	-6	True	AATAAA	-19	NA	138963346	138907550	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963307
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140808	chrX	+	1781	6	NNC	ENSMUSG00000031432.4	novel	1965	7	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	866.073761292882	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGGTGTACTGTCATA	NA	False	NA	27	True	AATAAA	-19	NA	139357373	139376889	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_139357613_139365979_139366164_139368420_139368473_139372745_139372920_139374527_139374688_139375917
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140867	chrX	+	2472	4	FSM	ENSMUSG00000042271.14	ENSMUST00000112914.8	2484	4	17	-5	17	5	multi-exon	FALSE	canonical	3	263	junction_3	9.93310961716756	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGTCTTTCTTAAGGTT	NA	False	NA	16	True	AATAAA	-27	NA	141011189	141022693	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_141011378_141012519_141012607_141019779_141019925_141020641
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140872	chrX	+	996	1	FSM	ENSMUSG00000083311.4	ENSMUST00000117081.2	966	1	692	-722	692	722	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAACAAAATACCCATGGA	NA	False	NA	NA	False	AATAAA	-32	NA	141081252	141082248	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_141081300_141082200
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140875	chrX	-	4115	11	ISM	ENSMUSG00000031278.13	ENSMUST00000112907.8	5137	16	44844	0	-17475	0	3prime_fragment	TRUE	canonical	3	142	junction_4	18.4380042303933	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTTTGTTTTTTCTTAT	NA	False	NA	-3	True	AATAAA	-18	NA	141128496	141100988	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140884	chrX	+	844	1	Genic_Genomic	ENSMUSG00000047045.18	novel	NA	NA	NA	NA	11787	133	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGAGTCCTGGCCTTGC	NA	False	NA	5	True	ATTAAA	-14	NA	141620523	141621367	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_+_141620500_141621400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140887	chrX	+	905	2	Antisense	novelGene_ENSMUSG00000080922.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTTTATGTTTTAAATAT	NA	False	NA	NA	False	NA	NA	NA	143050883	143104310	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_chrX_+_143051313_143103834
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140895	chrX	+	1646	4	FSM	ENSMUSG00000041718.17	ENSMUST00000070801.11	1802	4	159	-3	-37	3	multi-exon	FALSE	canonical	3	125	junction_3	294.754511792818	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTACTTTTTTAT	NA	False	NA	NA	False	AATAAA	-22	NA	143100958	143108196	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_143101118_143102894_143103058_143105007_143105147_143107011
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140905	chrX	+	373	4	NNC	ENSMUSG00000041718.17	novel	1802	4	NA	NA	1644	0	at_least_one_novel_splicesite	FALSE	canonical	2	69	junction_1	327.482315044136	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAAGTCCAGTTCATGG	NA	False	NA	13	True	AATAAA	-20	NA	143102662	143107146	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_+_143102703_143102998_143103058_143105007_143105147_143107011
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140938	chrX	+	2045	7	FSM	ENSMUSG00000095621.2	ENSMUST00000178169.2	2028	7	-17	0	-17	0	multi-exon	TRUE	canonical	0	0	junction_1	6.67707520800338	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTGTGTTTGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	148230595	148270780	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_148230705_148247706_148247833_148248551_148248632_148252302_148253262_148262449_148262532_148263337_148263388_148270141
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140941	chrX	+	2005	7	FSM	ENSMUSG00000072923.7	ENSMUST00000101181.5	1977	7	-28	0	-28	0	multi-exon	FALSE	canonical	0	0	junction_1	5.06622805119022	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	148377537	148419760	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_148377658_148394767_148394894_148395612_148395693_148399354_148400266_148411437_148411520_148412325_148412376_148419124
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140946	chrX	+	2046	7	FSM	ENSMUSG00000094378.8	ENSMUST00000101180.8	2029	7	-17	0	-17	0	multi-exon	TRUE	canonical	1	1	junction_6	4.6785562825394	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	148567451	148609690	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_148567561_148582582_148582709_148583428_148583509_148587159_148588119_148601122_148601205_148602010_148602061_148609050
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000140977	chrX	+	1904	16	NIC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	-10	0	combination_of_known_junctions	TRUE	canonical	3	50	junction_2	10.2058806577385	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTTCATTGTTCTC	NA	False	NA	19	True	AATAAA	-37	NA	149371241	149426874	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_+_149371339_149371940_149372041_149372948_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141006	chrX	-	1425	5	FSM	ENSMUSG00000025264.13	ENSMUST00000026295.10	3804	5	0	2379	0	7	multi-exon	FALSE	canonical	3	72	junction_1	125.415310070182	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTCCTCCCCCCCCCTC	NA	False	NA	4	True	AATAAA	-28	NA	149879539	149872469	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_149873411_149873591_149873778_149874671_149874764_149879160_149879252_149879424
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141010	chrX	-	1316	4	NIC	ENSMUSG00000025264.13	novel	3804	5	NA	NA	-2	7	combination_of_known_junctions	FALSE	canonical	3	44	junction_3	147.521749808856	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTCCTCCCCCCCCCTC	NA	False	NA	4	True	AATAAA	-28	NA	149879521	149872469	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_-_149873411_149873591_149873778_149874671_149874764_149879424
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141031	chrX	-	600	2	Genic_Genomic	ENSMUSG00000083596.5	novel	483	1	NA	NA	-3993	42	multi-exon	FALSE	canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCCAGAGACAAATATGT	NA	False	NA	NA	False	AATAAA	-25	NA	150002638	149998120	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_-_149998687_150002604
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141047	chrX	+	2266	2	Genic_Genomic	ENSMUSG00000082778.2	novel	1000	1	NA	NA	-183591	211	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAAGCTTTCTTTTCCA	NA	False	NA	NA	False	AATAAA	-24	NA	150544772	150729574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_+_150545736_150728271
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141049	chrX	+	2288	2	Genic_Genomic	ENSMUSG00000082778.2	novel	1000	1	NA	NA	-183591	211	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAAGCTTTCTTTTCCA	NA	False	NA	NA	False	AATAAA	-24	NA	150544772	150729574	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_chrX_+_150545781_150728294
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141056	chrX	+	458	1	ISM	ENSMUSG00000025261.19	ENSMUST00000026292.15	14579	83	131108	525	10177	-525	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCACAACGGAGTTTTT	NA	False	NA	31	True	AATAAA	-20	NA	150717430	150717888	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_+_150717400_150717900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141083	chrX	+	309	1	NIC	ENSMUSG00000025260.11	novel	962	6	NA	NA	737	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGCAGTCTTGTGTG	NA	False	NA	16	True	AATAAA	-16	NA	150787129	150787438	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_+_150787100_150787400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141087	chrX	-	1510	8	FSM	ENSMUSG00000025257.6	ENSMUST00000026288.5	1508	8	0	-2	0	2	multi-exon	FALSE	canonical	3	80	junction_7	14.6816559150582	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTGTCGTAAGAGTACA	NA	False	NA	0	True	AATAAA	-19	NA	150799291	150787575	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_150787807_150787914_150788310_150788734_150788854_150790211_150790557_150790742_150790825_150792520_150792638_150798776_150798865_150799158
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141228	chrX	-	951	3	FSM	ENSMUSG00000025283.16	ENSMUST00000138944.8	1275	3	492	-168	-353	-6	multi-exon	FALSE	canonical	3	1003	junction_1	88	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCCTGAGCATTTTT	NA	False	NA	-13	True	AATAAA	-18	NA	153997408	153996133	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_153996664_153996892_153996934_153997028
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141246	chrX	+	1763	15	FSM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	-10	-1	-10	1	multi-exon	FALSE	canonical	2	666	junction_2	111.349262068796	1047	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTCTCCCATGTTGTT	NA	False	NA	27	True	AATAAA	-21	NA	154045428	154080651	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_154045671_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141298	chrX	-	2438	10	NIC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	-2	44	intron_retention	FALSE	canonical	3	342	junction_4	49.2072964578563	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTTGTCCCTTTAT	NA	False	NA	-2	True	ATTAAA	-19	NA	156275042	156228647	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141306	chrX	-	1058	6	NIC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	-3	7198	combination_of_known_junctions	FALSE	canonical	3	97	junction_5	56.7577307509735	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTATGTTGGATATT	NA	False	NA	NA	False	AATAAA	-24	NA	156381678	156341743	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrX_-_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156381491
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141317	chrX	-	802	5	FSM	ENSMUSG00000046873.19	ENSMUST00000139786.8	2379	5	-31	1608	-3	121	multi-exon	FALSE	canonical	3	154	junction_3	45.1386752131695	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTTATTTGAGTTTTG	NA	False	NA	NA	False	AATAAA	-25	NA	156381678	156355822	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141359	chrX	+	216	1	Intergenic	novelGene_490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGTCAAAAGAAAGGGTAG	NA	False	NA	NA	False	NA	NA	NA	158276482	158276698	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrX_+_158276500_158276700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141387	chrX	-	566	4	ISM	ENSMUSG00000031299.11	ENSMUST00000126440.2	629	5	-52	722	-5	-722	5prime_fragment	FALSE	canonical	3	1378	junction_3	46.54985380094	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGATCCTTCTGGCGT	NA	False	NA	NA	False	NA	NA	NA	158921357	158913005	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_-_158913232_158915064_158915239_158916168_158916229_158921251
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141394	chrX	+	957	9	ISM	ENSMUSG00000031295.14	ENSMUST00000033652.9	4133	33	75621	0	20268	0	3prime_fragment	FALSE	canonical	3	90	junction_2	14.2297004536287	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCATTTGTAGACTCAT	NA	False	NA	7	True	CATAAA	-18	NA	159361050	159374137	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_+_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141400	chrX	+	531	1	FSM	ENSMUSG00000059461.8	ENSMUST00000118642.2	387	1	-54	-90	-54	90	mono-exon	FALSE	NA	NA	NA	NA	NA	2397	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTCTTAAAAGTAGGAATT	NA	False	NA	NA	False	NA	NA	NA	161349798	161350329	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_161349800_161350300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141457	chrX	-	2322	9	FSM	ENSMUSG00000031357.4	ENSMUST00000033723.4	2087	9	-21	-214	-21	214	multi-exon	FALSE	canonical	3	113	junction_1	15.2105021284637	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACGTATTTATATTCTT	NA	False	NA	2	True	AATAAA	-26	NA	161671464	161639838	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_161641005_161642294_161642443_161642868_161642928_161646055_161646205_161655510_161655651_161661326_161661401_161665675_161665743_161665963_161666083_161671064
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141475	chrX	+	3203	5	FSM	ENSMUSG00000031367.16	ENSMUST00000112294.9	3199	5	-4	0	-1	0	multi-exon	FALSE	canonical	3	133	junction_1	15.8192920195564	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTCATGTGAATGAC	NA	False	NA	-2	True	AATAAA	-13	NA	162692136	162712542	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162709898
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141482	chrX	-	332	1	ISM	ENSMUSG00000031370.13	ENSMUST00000112289.9	2735	11	21988	827	6875	-827	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTTTTTATAGCAG	NA	False	NA	-4	True	AATAAA	-19	NA	162719597	162719265	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_-_162719300_162719600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141507	chrX	-	1564	6	NNC	ENSMUSG00000031370.13	novel	460	6	NA	NA	-31	978	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	332.21956594999	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCTTGAAGATATTTT	NA	False	NA	-10	True	AATATA	-15	NA	162741688	162735608	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_162736651_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741583
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141516	chrX	-	1598	6	FSM	ENSMUSG00000031370.13	ENSMUST00000147928.8	460	6	-111	-1027	-2	978	multi-exon	FALSE	canonical	3	79	junction_5	268.200372855818	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCTTGAAGATATTTT	NA	False	NA	-10	True	AATATA	-15	NA	162741659	162735608	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741522
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141547	chrX	-	1995	4	FSM	ENSMUSG00000040749.12	ENSMUST00000134272.2	803	4	-10	-1182	-10	2	multi-exon	FALSE	canonical	3	72	junction_3	219.75794765049	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTTTTTCTCACTTTT	NA	False	NA	-16	True	AATAAA	-17	NA	162859499	162853698	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859182
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141576	chrX	+	1119	2	ISM	ENSMUSG00000031381.17	ENSMUST00000208741.2	854	6	20	8168	0	-8168	5prime_fragment	FALSE	canonical	3	206	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGTAAGAATGTGCTATG	NA	False	NA	NA	False	NA	NA	NA	163202802	163206664	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_+_163202837_163205579
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141590	chrX	+	2866	9	FSM	ENSMUSG00000047757.18	ENSMUST00000167446.8	2953	9	90	-3	-30	0	multi-exon	TRUE	canonical	3	98	junction_5	7.72981241687015	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTTTTCTTTTACTGG	NA	False	NA	NA	False	ATTAAA	-20	NA	163763677	163780268	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163778768_163778882_163779118_163779765
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141602	chrX	-	436	4	ISM	ENSMUSG00000040586.9	ENSMUST00000049501.9	4453	23	47436	903	47436	-903	3prime_fragment	FALSE	canonical	3	171	junction_3	11.2644968324772	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGTATTTTTTTAACA	NA	False	NA	NA	False	ATTAAA	-14	NA	165176264	165173931	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141638	chrX	+	885	1	FSM	ENSMUSG00000067147.8	ENSMUST00000118791.2	801	1	-25	-59	-25	59	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAAATATTTATCTAGAG	NA	False	NA	NA	False	ATTAAA	-15	NA	165637181	165638066	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_+_165637200_165638100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141648	chrX	-	607	3	NNC	ENSMUSG00000049775.17	novel	768	3	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	595.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTCTGCTTGGTGA	NA	False	NA	0	True	AATAAA	-15	NA	165992160	165990088	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrX_-_165990532_165990932_165991038_165992101
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141649	chrX	-	690	3	FSM	ENSMUSG00000049775.17	ENSMUST00000112175.2	864	3	373	-199	373	0	multi-exon	FALSE	canonical	1	16	junction_2	587.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTCTGCTTGGTGA	NA	False	NA	0	True	AATAAA	-15	NA	165991450	165990088	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_165990532_165990932_165991048_165991318
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141665	chrX	-	1739	7	FSM	ENSMUSG00000025742.6	ENSMUST00000026839.5	3699	7	-4	1964	-4	-1964	multi-exon	TRUE	canonical	3	187	junction_5	11.6535640709422	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTTTAATTGCCACTT	NA	False	NA	NA	False	ATTAAA	-18	NA	166165749	166131281	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156998_166157183_166165465
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141668	chrX	-	647	3	FSM	ENSMUSG00000025742.6	ENSMUST00000145456.2	599	3	-43	-5	-4	5	multi-exon	FALSE	canonical	1	3	junction_1	111.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTCCTAAGATCTCCT	NA	False	NA	NA	False	AATAAA	-30	NA	166165749	166155399	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_chrX_-_166155579_166156998_166157183_166165465
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141691	chrX	+	188	1	Intergenic	novelGene_491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCGGCGTCGGCTCCTCC	6200	False	NA	3	True	AATAAA	-17	NA	169105359	169105547	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrX_+_169105400_169105500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141698	chrX_GL456233v2_random	-	1363	8	Intergenic	novelGene_492	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_7	117.818088767457	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTTAATACCTTCTGT	NA	False	NA	-1	True	AATAAA	-29	NA	134078	106805	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Intergenic_chrX_GL456233v2_random_-_107510_109039_109133_116592_116661_119836_119928_123935_124074_125547_125606_127389_127507_133984
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141737	chrY	+	231	2	NIC	ENSMUSG00000096768.9	novel	567	3	NA	NA	18	0	intron_retention	FALSE	canonical	2	80	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	5080	False	NA	NA	False	AATAAA	-18	NA	90797134	90827734	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_chrY_+_90797249_90827617
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141743	chrY	+	191	2	NNC	ENSMUSG00000096768.9	novel	3347	2	NA	NA	3156	5937	at_least_one_novel_splicesite	FALSE	canonical	3	404	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	327	False	NA	NA	False	AATAAA	-18	NA	90804875	90833671	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_chrY_+_90804950_90833554
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141753	SIRV1	-	1572	6	FSM	SIRV1A	SIRV101	1561	6	-5	-6	0	6	multi-exon	FALSE	canonical	3	1499	junction_5	1975.53128044078	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATACTTCCTTCCTTGA	NA	False	NA	NA	False	NA	NA	NA	10791	994	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10444
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141766	SIRV1	-	1566	6	NNC	SIRV1A	novel	1561	6	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2399.0091621334	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGATGCATACTTCCTTC	NA	False	NA	NA	False	NA	NA	NA	10787	999	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV1_-_1485_6337_6474_6557_6814_7552_7815_10282_10367_10444
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141772	SIRV1	-	1560	6	NNC	SIRV1A	novel	1561	6	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2380.49302456445	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGATGCATACTTCCTTC	NA	False	NA	NA	False	NA	NA	NA	10787	999	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10447
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141773	SIRV1	-	1366	6	NNC	SIRV1A	novel	1363	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2380.49302456445	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGATGCATACTTCCTTC	NA	False	NA	NA	False	NA	NA	NA	10791	999	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10645
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141783	SIRV1	-	1357	6	NIC	SIRV1A	novel	1363	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	2177.93595865443	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10791	1000	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_SIRV1_-_1485_6337_6474_6560_6814_7552_7809_10282_10367_10647
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141786	SIRV1	-	1555	6	NNC	SIRV1A	novel	1561	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2399.0091621334	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10787	1000	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV1_-_1485_6337_6464_6557_6814_7552_7815_10282_10367_10444
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141788	SIRV1	-	1559	6	NNC	SIRV1A	novel	1561	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2155.51938984552	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10787	1000	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV1_-_1485_6337_6474_6560_6814_7552_7812_10282_10367_10444
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141789	SIRV1	-	1360	6	NNC	SIRV1A	novel	1363	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2177.93595865443	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10791	1000	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV1_-_1485_6337_6474_6560_6814_7552_7812_10282_10367_10647
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141790	SIRV1	-	1559	6	NNC	SIRV1A	novel	1561	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2399.0091621334	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10787	1000	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV1_-_1485_6337_6464_6553_6814_7552_7815_10282_10367_10444
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141791	SIRV1	-	1556	6	NIC	SIRV1A	novel	1561	6	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	2155.51938984552	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10787	1000	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_SIRV1_-_1485_6337_6474_6560_6814_7552_7809_10282_10367_10444
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141792	SIRV1	-	1364	6	NNC	SIRV1A	novel	1363	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2432.87989017132	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10791	1000	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV1_-_1485_6337_6464_6549_6814_7552_7815_10282_10367_10647
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141793	SIRV1	-	1360	6	NNC	SIRV1A	novel	1363	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2432.87989017132	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10791	1000	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV1_-_1485_6337_6464_6553_6814_7552_7815_10282_10367_10647
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141794	SIRV1	-	966	3	NNC	SIRV1A	novel	973	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	452.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10787	1000	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV1_-_1485_7552_7801_10553
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141797	SIRV1	-	1563	6	NNC	SIRV1A	novel	1561	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2399.0091621334	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10787	1000	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV1_-_1485_6337_6464_6549_6814_7552_7815_10282_10367_10444
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141798	SIRV1	-	1358	6	NNC	SIRV1A	novel	1363	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2129.5337893539	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10791	1000	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV1_-_1485_6337_6474_6560_6809_7552_7815_10282_10367_10647
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141826	SIRV1	-	485	1	NIC	SIRV1A	novel	1561	6	NA	NA	8881	0	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	1485	1000	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_SIRV1_-_1000_1500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141829	SIRV1	-	1298	4	NNC	SIRV1A	novel	1300	4	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_3	2523.73272928987	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTGAATCGATGCATAC	NA	False	NA	NA	False	NA	NA	NA	10367	1006	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV1_-_1485_6337_6814_7552_7812_10282
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141831	SIRV1	-	1295	4	NIC	SIRV1A	novel	1300	4	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_3	2523.73272928987	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTGAATCGATGCATAC	NA	False	NA	NA	False	NA	NA	NA	10367	1006	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_SIRV1_-_1485_6337_6814_7552_7809_10282
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141838	SIRV1	-	677	5	FSM	SIRV1A	SIRV105	670	5	-5	-2	-5	2	multi-exon	FALSE	canonical	3	1547	junction_4	2187.81237769604	3559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGAAGTCAAAAGACTTC	NA	False	NA	NA	False	NA	NA	NA	10645	6447	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_SIRV1_-_6474_6560_6814_7552_7815_10282_10367_10593
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141841	SIRV1	-	672	5	NNC	SIRV1A	novel	670	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2647.45126253535	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGGAAGTCAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	10645	6449	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV1_-_6464_6553_6814_7552_7815_10282_10367_10593
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141843	SIRV1	-	672	5	NNC	SIRV1A	novel	670	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2647.45126253535	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGGAAGTCAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	10641	6449	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV1_-_6464_6549_6814_7552_7815_10282_10367_10593
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141849	SIRV1	-	665	5	NIC	SIRV1A	novel	670	5	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	2250.11448319858	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGGAAGTCAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	10641	6449	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_SIRV1_-_6474_6560_6814_7552_7809_10282_10367_10593
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141850	SIRV1	-	674	5	NNC	SIRV1A	novel	670	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2636.59746406235	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGGAAGTCAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	10642	6449	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV1_-_6474_6560_6814_7552_7815_10282_10367_10591
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141853	SIRV1	-	666	5	NNC	SIRV1A	novel	670	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2185.48522930264	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGGAAGTCAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	10641	6449	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV1_-_6474_6560_6809_7552_7815_10282_10367_10593
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141854	SIRV1	-	668	5	NNC	SIRV1A	novel	670	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2250.11448319858	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGGAAGTCAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	10641	6449	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV1_-_6474_6560_6814_7552_7812_10282_10367_10593
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141856	SIRV1	-	659	5	NNC	SIRV1A	novel	670	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2636.59746406235	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGGAAGTCAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	10641	6449	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV1_-_6474_6560_6814_7552_7815_10282_10367_10605
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141871	SIRV1	-	640	4	NNC	SIRV1A	novel	670	5	NA	NA	-1	-109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2557.61229795813	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAGGTTTGTGAGAAGGGA	NA	False	NA	NA	False	NA	NA	NA	10641	6558	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV1_-_6814_7552_7815_10291_10367_10593
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141887	SIRV1	+	505	2	ISM	SIRV1B	SIRV109	464	3	-64	400	-64	-363	5prime_fragment	FALSE	canonical	3	3891	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACGCAACTAGTTATTAC	NA	False	NA	NA	False	NA	NA	NA	10647	11243	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_SIRV1_+_10792_10882
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141888	SIRV1	+	732	3	NNC	SIRV1B	novel	464	3	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1945.5	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTTCGGCTAATCATGT	NA	False	NA	NA	False	NA	NA	NA	10647	11643	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV1_+_10792_10882_11231_11403
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141893	SIRV1	+	472	3	FSM	SIRV1B	SIRV109	464	3	-4	-4	-4	4	multi-exon	FALSE	canonical	3	3494	junction_2	198.5	3999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGGCTAATCATGTTATC	NA	False	NA	NA	False	NA	NA	NA	10707	11647	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_SIRV1_+_10792_10882_11058_11434
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141899	SIRV1	+	462	3	NNC	SIRV1B	novel	464	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1945.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTTCGGCTAATCATGT	NA	False	NA	NA	False	NA	NA	NA	10710	11643	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV1_+_10792_10882_11058_11437
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141901	SIRV1	-	597	2	NNC	SIRV1A	novel	744	3	NA	NA	0	-235	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCACGATTTAATTACGCC	NA	False	NA	NA	False	NA	NA	NA	11643	10882	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV1_-_11243_11406
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141906	SIRV1	+	210	1	NIC	SIRV1B	novel	464	3	NA	NA	722	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTTCGGCTAATCATGT	NA	False	NA	NA	False	NA	NA	NA	11433	11643	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_SIRV1_+_11400_11600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141909	SIRV10001	+	868	1	FSM	SIRV10001A	SIRV10001	9941	1	0	9073	0	-9073	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGTAACCTTTTGACGG	NA	False	NA	NA	False	NA	NA	NA	0	868	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_SIRV10001_+_0_900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141924	SIRV10002	+	664	1	FSM	SIRV10002A	SIRV10002	10001	1	0	9337	0	-9337	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAGGTATTAGCAGTCA	NA	False	NA	NA	False	NA	NA	NA	0	664	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_SIRV10002_+_0_700
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141940	SIRV12002	+	254	2	Genic_Genomic	SIRV12002A	novel	11999	1	NA	NA	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAGAAA	-36	NA	0	11999	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_SIRV12002_+_51_11795
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141946	SIRV12002	+	1515	1	FSM	SIRV12002A	SIRV12002	11999	1	10484	0	10484	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAGAAA	-36	NA	10484	11999	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_SIRV12002_+_10500_12000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141956	SIRV2	-	2050	11	NNC	SIRV2A	novel	2051	11	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	922.110779678884	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCAACGTGGCATGCGT	NA	False	NA	NA	False	NA	NA	NA	5908	999	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3375_3665_3826_3969_4095_4338_4480_4687_4801_5788
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141958	SIRV2	-	2060	11	NNC	SIRV2A	novel	2051	11	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1033.0061180845	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCAACGTGGCATGCGT	NA	False	NA	NA	False	NA	NA	NA	5908	999	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV2_-_1662_1741_1854_1973_2065_2667_2803_2881_3011_3105_3375_3665_3826_3966_4095_4338_4480_4687_4801_5788
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141960	SIRV2	-	2056	11	NNC	SIRV2A	novel	2051	11	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	922.110779678884	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCAACGTGGCATGCGT	NA	False	NA	NA	False	NA	NA	NA	5908	999	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3375_3665_3826_3963_4095_4338_4480_4687_4801_5788
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141964	SIRV2	-	2050	11	NNC	SIRV2A	novel	2051	11	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1028.45157396933	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCAACGTGGCATGCGT	NA	False	NA	NA	False	NA	NA	NA	5908	999	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3108_3375_3665_3826_3966_4095_4338_4480_4687_4801_5788
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141974	SIRV2	-	1975	11	NNC	SIRV2A	novel	1971	11	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	926.324478786996	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCTCTATAGCTGTATCT	NA	False	NA	NA	False	NA	NA	NA	5911	1034	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3326_3665_3826_3963_4095_4338_4480_4687_4801_5788
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141986	SIRV2	+	529	1	FSM	SIRV2B	SIRV205	523	1	-4	-2	-4	2	mono-exon	FALSE	NA	NA	NA	NA	NA	1850	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTCTACCGCTTCTTAC	NA	False	NA	NA	False	NA	NA	NA	1104	1633	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_SIRV2_+_1100_1600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141996	SIRV2	-	735	3	NNC	SIRV2A	novel	740	3	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	1409.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTATCCTATATCGGA	NA	False	NA	NA	False	NA	NA	NA	4733	3643	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV2_-_3817_3963_4480_4687
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000141997	SIRV2	-	741	3	NNC	SIRV2A	novel	740	3	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	1409.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTATCCTATATCGGA	NA	False	NA	NA	False	NA	NA	NA	4733	3643	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV2_-_3817_3957_4480_4687
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142012	SIRV2	-	698	5	FSM	SIRV2A	SIRV203	686	5	-8	-4	4	4	multi-exon	FALSE	canonical	3	2087	junction_4	259.923065540556	5685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACGTGGACGTTTCAGGT	NA	False	NA	NA	False	NA	NA	NA	5903	3661	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_SIRV2_-_3826_3966_4095_4338_4480_4687_4801_5751
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142019	SIRV2	-	691	5	NNC	SIRV2A	novel	686	5	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1085.38066479001	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGACGTGGACGTTTCA	NA	False	NA	NA	False	NA	NA	NA	5896	3664	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV2_-_3826_3963_4095_4338_4480_4687_4801_5751
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142022	SIRV2	-	680	5	NNC	SIRV2A	novel	686	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1085.38066479001	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGACGTGGACGTTTC	NA	False	NA	NA	False	NA	NA	NA	5895	3665	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV2_-_3817_3963_4095_4338_4480_4687_4801_5751
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142023	SIRV2	-	686	5	NNC	SIRV2A	novel	686	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1085.38066479001	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGACGTGGACGTTTC	NA	False	NA	NA	False	NA	NA	NA	5895	3665	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV2_-_3817_3957_4095_4338_4480_4687_4801_5751
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142030	SIRV2	-	680	5	NNC	SIRV2A	novel	686	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1114.98573421367	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGACGTGGACGTTTC	NA	False	NA	NA	False	NA	NA	NA	5896	3665	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV2_-_3826_3966_4095_4338_4480_4687_4801_5758
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142033	SIRV2	-	695	5	NNC	SIRV2A	novel	686	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1085.38066479001	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGACGTGGACGTTTC	NA	False	NA	NA	False	NA	NA	NA	5895	3665	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV2_-_3826_3957_4095_4338_4480_4687_4801_5751
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142034	SIRV2	-	676	5	NNC	SIRV2A	novel	686	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1312.09155549451	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGACGTGGACGTTTC	NA	False	NA	NA	False	NA	NA	NA	5895	3665	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV2_-_3826_3969_4095_4338_4480_4687_4801_5758
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142035	SIRV2	-	685	5	NNC	SIRV2A	novel	686	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1253.50717987573	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGACGTGGACGTTTC	NA	False	NA	NA	False	NA	NA	NA	5895	3665	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV2_-_3826_3963_4095_4342_4480_4687_4801_5751
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142037	SIRV2	-	683	5	NNC	SIRV2A	novel	686	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1312.09155549451	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGACGTGGACGTTTC	NA	False	NA	NA	False	NA	NA	NA	5896	3665	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV2_-_3826_3963_4095_4338_4480_4687_4801_5758
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142040	SIRV2	-	683	5	NNC	SIRV2A	novel	686	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1005.33163060753	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGACGTGGACGTTTC	NA	False	NA	NA	False	NA	NA	NA	5895	3665	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV2_-_3826_3966_4095_4338_4477_4687_4801_5751
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142066	SIRV3	-	475	3	NNC	SIRV3B	novel	479	3	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2695.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTGTATGGCGGACA	NA	False	NA	NA	False	NA	NA	NA	1982	998	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV3_-_1168_1532_1755_1898
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142067	SIRV3	-	473	3	NNC	SIRV3B	novel	479	3	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2712.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTGTATGGCGGACA	NA	False	NA	NA	False	NA	NA	NA	1982	998	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV3_-_1168_1540_1765_1902
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142068	SIRV3	-	471	3	NNC	SIRV3B	novel	479	3	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2695.5	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTGTATGGCGGACA	NA	False	NA	NA	False	NA	NA	NA	1982	998	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV3_-_1168_1532_1755_1902
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142069	SIRV3	-	467	3	NNC	SIRV3B	novel	479	3	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2695.5	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTGTATGGCGGACA	NA	False	NA	NA	False	NA	NA	NA	1982	998	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV3_-_1168_1532_1765_1916
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142077	SIRV3	+	2377	3	FSM	SIRV3A	SIRV306	2373	3	-3	-1	-3	1	multi-exon	FALSE	canonical	3	759	junction_2	1218.5	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCTAACAGTAAAAGAGTC	NA	False	NA	NA	False	NA	NA	NA	1941	8293	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_SIRV3_+_2006_4003_4081_6057
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142081	SIRV3	+	2466	5	NNC	SIRV3A	novel	2467	5	NA	NA	-1	1	intron_retention	FALSE	canonical	0	0	junction_1	1070.16689703055	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAACGTCTCGTAAGACG	NA	False	NA	NA	False	NA	NA	NA	1943	8940	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV3_+_2003_4568_4780_6057_7989_8127_8208_8755
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142086	SIRV3	+	2464	5	NIC	SIRV3A	novel	2467	5	NA	NA	-1	1	intron_retention	FALSE	canonical	3	1234	junction_3	388.592974717763	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAACGTCTCGTAAGACG	NA	False	NA	NA	False	NA	NA	NA	1943	8940	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_SIRV3_+_2006_4568_4775_6057_7989_8127_8208_8755
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142089	SIRV3	+	600	4	NIC	SIRV3A	novel	779	5	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	759	junction_2	1052.04319725422	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAACGTCTCGTAAGACG	NA	False	NA	NA	False	NA	NA	NA	1943	8940	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_SIRV3_+_2006_4003_4081_6057_6334_8755
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142091	SIRV3	+	2470	5	NNC	SIRV3A	novel	1083	8	NA	NA	-1	1	intron_retention	FALSE	canonical	0	0	junction_3	1054.90390557624	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAACGTCTCGTAAGACG	NA	False	NA	NA	False	NA	NA	NA	1943	8940	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV3_+_2006_4568_4780_6057_7987_8124_8208_8755
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142096	SIRV3	+	2467	5	NNC	SIRV3A	novel	2467	5	NA	NA	-1	1	intron_retention	FALSE	canonical	0	0	junction_3	1054.90390557624	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAACGTCTCGTAAGACG	NA	False	NA	NA	False	NA	NA	NA	1943	8940	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV3_+_2006_4568_4780_6057_7987_8127_8208_8755
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142101	SIRV3	+	2473	5	NNC	SIRV3A	novel	2467	5	NA	NA	-1	1	intron_retention	FALSE	canonical	0	0	junction_1	1070.16689703055	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAACGTCTCGTAAGACG	NA	False	NA	NA	False	NA	NA	NA	1943	8940	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV3_+_2016_4574_4780_6057_7989_8127_8208_8755
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142106	SIRV3	+	1102	8	NNC	SIRV3A	novel	1083	8	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1147.84278593564	1745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTTAACGTCTCGTAAGA	NA	False	NA	NA	False	NA	NA	NA	1952	8938	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV3_+_2006_4003_4081_4568_4780_6057_6334_7270_7363_7861_7989_8124_8208_8755
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142107	SIRV3	+	797	5	FSM	SIRV3A	SIRV307	779	5	-11	-7	8	7	multi-exon	FALSE	canonical	3	1252	junction_4	794.143052289699	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTCGTAAGACGGTGAAG	NA	False	NA	NA	False	NA	NA	NA	1952	8946	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_SIRV3_+_2006_4003_4081_4574_4775_6057_6334_8755
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142117	SIRV3	+	1810	2	NNC	SIRV3A	novel	1807	2	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1957	7822	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV3_+_2003_6057
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142120	SIRV3	+	1095	8	NNC	SIRV3A	novel	1083	8	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1321.52430541247	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTTAACGTCTCGTAAGA	NA	False	NA	NA	False	NA	NA	NA	1957	8938	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV3_+_2006_4003_4081_4568_4780_6057_6334_7270_7363_7861_7987_8124_8208_8755
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142131	SIRV3	+	1085	8	NNC	SIRV3A	novel	1083	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1321.52430541247	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	1961	8937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV3_+_2006_4003_4081_4568_4780_6057_6334_7270_7363_7861_7975_8117_8208_8755
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142132	SIRV3	+	1087	8	NNC	SIRV3A	novel	1083	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1103.73527216467	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	1961	8937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV3_+_2006_4003_4081_4568_4775_6057_6334_7270_7363_7861_7989_8124_8208_8755
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142133	SIRV3	+	779	5	NNC	SIRV3A	novel	779	5	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1138.90122486544	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAACGTCTCGTAAGACG	NA	False	NA	NA	False	NA	NA	NA	1961	8940	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV3_+_2006_4003_4081_4574_4772_6057_6334_8755
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142134	SIRV3	+	787	5	NIC	SIRV3A	novel	779	5	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	1252	junction_4	844.377100293465	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAACGTCTCGTAAGACG	NA	False	NA	NA	False	NA	NA	NA	1961	8940	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_SIRV3_+_2006_4003_4081_4574_4780_6057_6334_8755
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142143	SIRV3	+	1088	8	NNC	SIRV3A	novel	1083	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1204.30067775825	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	1962	8937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV3_+_2003_4003_4081_4568_4780_6057_6334_7270_7363_7861_7989_8124_8208_8755
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142150	SIRV3	+	1097	8	NNC	SIRV3A	novel	1083	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1327.2431609028	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	1962	8937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV3_+_2006_4003_4081_4568_4780_6057_6334_7270_7363_7861_7989_8124_8200_8741
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142151	SIRV3	+	1087	8	NNC	SIRV3A	novel	1083	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1147.84278593564	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	1962	8937	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV3_+_2006_4003_4081_4568_4780_6057_6334_7270_7363_7865_7989_8124_8208_8755
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142154	SIRV3	+	777	5	NNC	SIRV3A	novel	779	5	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1139.10631088586	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAACGTCTCGTAAGACG	NA	False	NA	NA	False	NA	NA	NA	1962	8940	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV3_+_2006_4003_4081_4578_4775_6057_6334_8755
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142173	SIRV3	+	432	3	NIC	SIRV3A	novel	436	3	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	1440	junction_1	84.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATCTTAATAGACGATT	NA	False	NA	NA	False	NA	NA	NA	4001	6718	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_SIRV3_+_4081_4574_4780_6570
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142177	SIRV3	+	432	3	NNC	SIRV3A	novel	436	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	804.5	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATCTTAATAGACGATT	NA	False	NA	NA	False	NA	NA	NA	4002	6718	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV3_+_4076_4568_4780_6570
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142183	SIRV3	+	430	3	NNC	SIRV3A	novel	436	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1633	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATCTTAATAGACGATT	NA	False	NA	NA	False	NA	NA	NA	4002	6718	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV3_+_4081_4568_4780_6577
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142190	SIRV3	+	446	3	NNC	SIRV3A	novel	436	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1633	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATCTTAATAGACGATT	NA	False	NA	NA	False	NA	NA	NA	4002	6718	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV3_+_4081_4568_4780_6561
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142203	SIRV3	+	2236	1	NIC	SIRV3A	novel	2467	5	NA	NA	2053	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACCTAACAGTAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	6056	8292	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_SIRV3_+_6100_8300
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142208	SIRV3	+	185	1	Genic_Genomic	SIRV3A	novel	NA	NA	NA	NA	4752	1	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAACGTCTCGTAAGACG	NA	False	NA	NA	False	NA	NA	NA	8755	8940	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Genic_Genomic_SIRV3_+_8800_8900
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142212	SIRV3	-	597	3	NNC	SIRV3C	novel	589	3	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	688.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGTTTTGGGTACTGG	NA	False	NA	NA	False	NA	NA	NA	9914	8757	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV3_-_8967_9189_9331_9667
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142213	SIRV3	-	586	3	NNC	SIRV3C	novel	589	3	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	688.5	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGTTTTGGGTACTGG	NA	False	NA	NA	False	NA	NA	NA	9914	8757	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV3_-_8967_9189_9325_9672
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142230	SIRV4	+	1563	3	NNC	SIRV4C	novel	1567	3	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	509.5	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGTAACCTGTCAAGT	NA	False	NA	NA	False	NA	NA	NA	999	3404	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV4_+_1341_1678_1886_2389
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142234	SIRV4	+	1565	3	NNC	SIRV4C	novel	1567	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	521	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTGTAACCTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	999	3403	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV4_+_1347_1678_1886_2392
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142246	SIRV4	-	942	2	Antisense	novelGene_SIRV4C_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATTAAAGCGACTGTAC	NA	False	NA	NA	False	NA	NA	NA	2771	1454	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_SIRV4_-_1882_2256
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142248	SIRV4	-	954	2	Antisense	novelGene_SIRV4C_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATTAAAGCGACTGTAC	NA	False	NA	NA	False	NA	NA	NA	2771	1454	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_SIRV4_-_1894_2256
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142263	SIRV4	-	616	2	NNC	SIRV4B	novel	617	2	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	25	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTAAAAATAGCCTGTTA	NA	False	NA	NA	False	NA	NA	NA	5158	3635	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV4_-_4104_5010
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142266	SIRV4	-	605	4	FSM	SIRV4A	SIRV404	592	4	-6	-7	-6	7	multi-exon	FALSE	canonical	3	669	junction_3	2787.93595494747	10862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAGAGCGTATGTTGAA	NA	False	NA	NA	False	NA	NA	NA	14629	8315	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_SIRV4_-_8373_8629_8991_13672_13823_14592
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142269	SIRV4	-	588	4	NNC	SIRV4A	novel	592	4	NA	NA	-1	2	intron_retention	FALSE	canonical	0	0	junction_3	3065.46367708958	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATATTTAGAGCGTATG	NA	False	NA	NA	False	NA	NA	NA	14624	8320	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV4_-_8373_8629_8991_13672_13833_14609
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142273	SIRV4	-	592	4	NNC	SIRV4A	novel	592	4	NA	NA	-1	2	intron_retention	FALSE	canonical	0	0	junction_1	3387.93293256457	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATATTTAGAGCGTATG	NA	False	NA	NA	False	NA	NA	NA	14624	8320	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV4_-_8378_8637_8991_13672_13823_14592
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142279	SIRV4	-	683	3	ISM	SIRV4A	SIRV404	592	4	679	0	-7	0	3prime_fragment	FALSE	canonical	3	4098	junction_1	1700	9014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	13944	8322	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_SIRV4_-_8373_8629_8991_13672
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142280	SIRV4	-	587	4	NNC	SIRV4A	novel	592	4	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_3	3065.46367708958	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	14624	8322	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV4_-_8373_8629_8991_13672_13817_14592
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142283	SIRV4	-	585	4	NNC	SIRV4A	novel	592	4	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	3387.93293256457	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	14624	8322	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV4_-_8373_8637_8991_13672_13823_14592
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142284	SIRV4	-	595	4	NNC	SIRV4A	novel	592	4	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_3	3065.46367708958	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	14624	8322	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV4_-_8373_8629_8991_13672_13817_14584
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142295	SIRV4	-	583	4	NNC	SIRV4A	novel	592	4	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	3387.93293256457	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	14624	8322	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV4_-_8378_8644_8991_13672_13823_14592
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142299	SIRV4	-	467	4	ISM	SIRV4A	SIRV408	570	5	1294	0	109	0	3prime_fragment	FALSE	canonical	3	3524	junction_2	1753.79436270809	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTGATATTTAGAGCGT	NA	False	NA	NA	False	NA	NA	NA	13828	8323	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_SIRV4_-_8373_8629_8748_8846_8991_13672
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142308	SIRV4	-	362	1	NIC	SIRV4A	novel	670	4	NA	NA	4946	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTCTCTTTTCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	8991	8629	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_SIRV4_-_8600_9000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142313	SIRV4001	+	3997	1	FSM	SIRV4001A	SIRV4001	3997	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3997	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_SIRV4001_+_0_4000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142316	SIRV4002	+	3999	1	FSM	SIRV4002A	SIRV4002	3999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3999	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_SIRV4002_+_0_4000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142326	SIRV5	+	2028	16	NNC	SIRV5A	novel	2029	16	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	3425.02853840503	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1000	10991	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_1985_2034_2119_2157_2270_2316_3298_3405_3483_3641_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142336	SIRV5	+	539	2	NNC	SIRV5A	novel	552	2	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	0	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTACGGCCAGTTTAGC	NA	False	NA	NA	False	AATGAA	-17	NA	1008	2398	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_2000
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142338	SIRV5	+	2084	17	NNC	SIRV5A	novel	2085	17	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	3703.11488764442	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1008	10991	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_1985_2034_2119_2157_2270_2316_3298_3405_3483_3641_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142342	SIRV5	+	2089	17	NNC	SIRV5A	novel	2085	17	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_1	3250.47321554878	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCGCCAAAAAATGGGAG	NA	False	NA	NA	False	NA	NA	NA	1008	10993	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_1985_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142345	SIRV5	+	2091	17	NNC	SIRV5A	novel	2085	17	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	3709.87358064598	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1008	10991	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_1985_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6323_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142348	SIRV5	+	548	2	NNC	SIRV5A	novel	552	2	NA	NA	0	1	intron_retention	FALSE	canonical	2	386	junction_1	0	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTACGGCCAGTTTAGCC	NA	False	NA	NA	False	AATGAA	-18	NA	1008	2399	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_1992
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142359	SIRV5	+	1984	18	NNC	SIRV5A	novel	1984	18	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3930.70376962796	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTACCGCCAAAAAATGG	NA	False	NA	NA	False	NA	NA	NA	1019	10990	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_1985_2034_2119_2157_2270_2489_3298_3405_3483_3641_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142360	SIRV5	+	1991	18	NNC	SIRV5A	novel	1984	18	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3950.81907411633	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTACCGCCAAAAAATGG	NA	False	NA	NA	False	NA	NA	NA	1019	10990	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_1985_2034_2119_2157_2270_2489_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6323_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142388	SIRV5	+	514	5	NNC	SIRV5A	novel	533	6	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4159.52611483568	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTAAGTGGTCAAGCCACG	NA	False	NA	NA	False	NA	NA	NA	1024	3599	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_1925_2048_2270_2316_3298_3405_3483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142393	SIRV5	+	532	6	NNC	SIRV5A	novel	533	6	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4229.34356135796	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTAAGTGGTCAAGCCACG	NA	False	NA	NA	False	NA	NA	NA	1026	3599	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_1928_2034_2119_2157_2270_2316_3298_3405_3483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142397	SIRV5	+	540	6	NNC	SIRV5A	novel	533	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4229.34356135796	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1026	3598	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_1919_2034_2119_2157_2270_2316_3298_3405_3483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142403	SIRV5	+	540	6	NNC	SIRV5A	novel	533	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4214.09048787517	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_1925_2048_2126_2157_2270_2316_3298_3405_3483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142406	SIRV5	+	525	4	NNC	SIRV5A	novel	533	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3960.42626774218	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_1925_2108_3298_3405_3483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142407	SIRV5	+	524	6	NNC	SIRV5A	novel	533	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4335.8925540193	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_1925_2034_2119_2157_2279_2316_3298_3405_3483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142409	SIRV5	+	515	5	NNC	SIRV5A	novel	533	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4556.00078879493	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_1925_2034_2119_2157_3271_3405_3483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142411	SIRV5	+	506	5	NNC	SIRV5A	novel	533	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4556.00078879493	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_1925_2034_2119_2157_3280_3405_3483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142412	SIRV5	+	512	5	NNC	SIRV5A	novel	533	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4556.00078879493	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_1925_2034_2119_2163_3280_3405_3483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142413	SIRV5	+	526	6	NNC	SIRV5A	novel	533	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4229.34356135796	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_1932_2034_2119_2157_2270_2316_3298_3405_3483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142414	SIRV5	+	535	5	NNC	SIRV5A	novel	533	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4159.52611483568	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_1925_2034_2231_2316_3298_3405_3483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142420	SIRV5	+	542	5	NNC	SIRV5A	novel	533	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4556.00078879493	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_1925_2034_2119_2157_3244_3405_3483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142421	SIRV5	+	516	5	NNC	SIRV5A	novel	533	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4159.52611483568	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_1925_2048_2264_2316_3298_3405_3483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142424	SIRV5	+	2474	18	NNC	SIRV5A	novel	2474	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3712.23411033914	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGTAACCTTGGTAACT	NA	False	NA	NA	False	AGTAAA	-11	NA	1027	11867	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_1985_2034_2119_2157_2270_2316_3298_3405_3483_3641_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858_10992_11133
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142427	SIRV5	+	522	6	NNC	SIRV5A	novel	533	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4501.88771961274	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_1925_2034_2119_2157_2270_2316_3298_3405_3494
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142428	SIRV5	+	2481	18	NNC	SIRV5A	novel	2474	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3721.43232833737	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGTAACCTTGGTAACT	NA	False	NA	NA	False	AGTAAA	-11	NA	1027	11867	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_1985_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6323_6453_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858_10992_11133
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142429	SIRV5	+	522	6	NNC	SIRV5A	novel	533	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4501.88771961274	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_1925_2034_2119_2157_2270_2316_3298_3394_3483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142433	SIRV5	+	530	6	NNC	SIRV5A	novel	533	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4335.8925540193	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_1150_1925_2034_2119_2163_2279_2316_3298_3405_3483
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142477	SIRV5	+	116	1	NIC	SIRV5A	novel	2029	16	NA	NA	2426	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	3482	3598	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_SIRV5_+_3500_3600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142485	SIRV5	+	1417	10	NNC	SIRV5A	novel	2085	17	NA	NA	-2589	0	intron_retention	FALSE	canonical	0	0	junction_3	3285.64192950006	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	5612	10991	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_5627_6111_6170_6327_6459_6658_6723_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142495	SIRV5	+	529	2	NNC	SIRV5A	novel	526	3	NA	NA	-1	16	intron_retention	FALSE	canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGCAAGACCTCTTCTC	NA	False	NA	NA	False	NA	NA	NA	8200	11007	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_8586_10863
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142499	SIRV5	+	536	2	NNC	SIRV5A	novel	526	3	NA	NA	-1	16	intron_retention	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGCAAGACCTCTTCTC	NA	False	NA	NA	False	NA	NA	NA	8200	11007	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_8596_10866
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142504	SIRV5	+	905	4	NNC	SIRV5A	novel	885	4	NA	NA	-8	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5079.78413802091	3383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGTAACTTCGGAACTG	NA	False	NA	NA	False	AGTAAA	-20	NA	8307	11876	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_8382_8454_8586_10858_10992_11309
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142506	SIRV5	+	887	4	NNC	SIRV5A	novel	885	4	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5079.78413802091	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAACCTTGGTAACTTCG	NA	False	NA	NA	False	AGTAAA	-14	NA	8313	11870	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_8382_8454_8586_10858_10986_11309
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142508	SIRV5	+	889	4	NNC	SIRV5A	novel	885	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4368.0342896497	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAGTAACCTTGGTAAC	NA	False	NA	NA	False	AGTAAA	-10	NA	8315	11866	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_8382_8454_8596_10866_10992_11309
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142511	SIRV5	+	878	4	NNC	SIRV5A	novel	885	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5079.78413802091	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAGTAACCTTGGTAAC	NA	False	NA	NA	False	AGTAAA	-10	NA	8315	11866	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_8382_8454_8586_10858_10983_11309
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142512	SIRV5	+	882	4	NNC	SIRV5A	novel	885	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4368.0342896497	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAGTAACCTTGGTAAC	NA	False	NA	NA	False	AGTAAA	-10	NA	8315	11866	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV5_+_8382_8454_8586_10863_10992_11309
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142520	SIRV5	+	2480	1	FSM	SIRV5A	SIRV504	2473	1	-2	-5	-2	5	mono-exon	FALSE	NA	NA	NA	NA	NA	667	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAAACATTTGTTACAAG	NA	False	NA	NA	False	NA	NA	NA	11131	13611	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_SIRV5_+_11100_13600
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142534	SIRV6	+	1442	9	NNC	SIRV6A	novel	1435	9	NA	NA	-1	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	9786.95064789718	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACCGGGAGTATACTTA	NA	False	NA	NA	False	NA	NA	NA	999	11827	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_2470_2621_2740_2829_3106_3165_10724_10819_11031_11114_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142536	SIRV6	+	1440	9	NNC	SIRV6A	novel	1435	9	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	9798.7302621309	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACCGGGAGTATACTTA	NA	False	NA	NA	False	NA	NA	NA	999	11827	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_2470_2621_2740_2829_3106_3165_10721_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142537	SIRV6	+	1442	9	NNC	SIRV6A	novel	1435	9	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8168.1360318236	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACCGGGAGTATACTTA	NA	False	NA	NA	False	NA	NA	NA	999	11827	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1741_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142539	SIRV6	+	1432	9	NNC	SIRV6A	novel	1435	9	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8924.65156095043	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACCGGGAGTATACTTA	NA	False	NA	NA	False	NA	NA	NA	999	11827	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1645_1736_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142542	SIRV6	+	1431	9	NNC	SIRV6A	novel	1435	9	NA	NA	-1	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	9515.49083649262	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACCGGGAGTATACTTA	NA	False	NA	NA	False	NA	NA	NA	999	11827	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_2470_2621_2740_2829_3106_3165_10724_10819_11037_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142543	SIRV6	+	1443	9	NNC	SIRV6A	novel	1435	9	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	9798.7302621309	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACCGGGAGTATACTTA	NA	False	NA	NA	False	NA	NA	NA	999	11827	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_2470_2621_2740_2829_3106_3171_10724_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142545	SIRV6	+	1440	9	NNC	SIRV6A	novel	1435	9	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	9798.7302621309	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACCGGGAGTATACTTA	NA	False	NA	NA	False	NA	NA	NA	999	11827	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_2470_2621_2740_2829_3106_3171_10727_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142554	SIRV6	+	1440	9	NNC	SIRV6A	novel	1435	9	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9723.71523566867	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACCGGGAGTATACTTA	NA	False	NA	NA	False	NA	NA	NA	999	11827	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_2470_2621_2737_2829_3106_3165_10724_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142558	SIRV6	+	1431	9	NNC	SIRV6A	novel	1537	10	NA	NA	-1	1	at_least_one_novel_splicesite	TRUE	canonical	1	42	junction_6	10575.9576745737	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACCGGGAGTATACTTA	NA	False	NA	NA	False	NA	NA	NA	999	11827	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_2470_2621_2740_2829_3106_3165_10727_10819_11034_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142572	SIRV6	+	1439	9	NNC	SIRV6A	novel	1435	9	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9216.09335534179	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACCGGGAGTATACTTA	NA	False	NA	NA	False	NA	NA	NA	999	11827	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1189_1468_1535_1640_1736_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142583	SIRV6	+	1540	10	FSM	SIRV6A	SIRV604	1537	10	-1	-2	-1	2	multi-exon	FALSE	canonical	0	0	junction_4	9140.21704229429	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTTAGTTCAATCTTCA	NA	False	NA	NA	False	NA	NA	NA	1086	11839	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11034_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142591	SIRV6	+	1525	10	NNC	SIRV6A	novel	1528	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9605.2943708466	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGACCGGGAGTATACT	NA	False	NA	NA	False	NA	NA	NA	1087	11825	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10727_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142592	SIRV6	+	1535	10	NNC	SIRV6A	novel	1537	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9337.68589911961	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATACTTAGTTCAATCTTC	NA	False	NA	NA	False	NA	NA	NA	1087	11838	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11037_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142593	SIRV6	+	1536	10	NNC	SIRV6A	novel	1537	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9240.58480726447	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATACTTAGTTCAATCTTC	NA	False	NA	NA	False	NA	NA	NA	1087	11838	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1642_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11034_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142594	SIRV6	+	1544	10	NNC	SIRV6A	novel	1537	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	10272.8098828358	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATACTTAGTTCAATCTTC	NA	False	NA	NA	False	NA	NA	NA	1087	11838	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3171_10724_10819_11034_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142596	SIRV6	+	1534	10	NNC	SIRV6A	novel	1528	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9613.05668169246	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGACCGGGAGTATACT	NA	False	NA	NA	False	NA	NA	NA	1087	11825	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3171_10724_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142597	SIRV6	+	1541	10	NNC	SIRV6A	novel	1537	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	10379.2851974438	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATACTTAGTTCAATCTTC	NA	False	NA	NA	False	NA	NA	NA	1087	11838	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2737_2829_3106_3165_10724_10819_11034_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142598	SIRV6	+	1531	10	NNC	SIRV6A	novel	1528	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9613.05668169246	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGACCGGGAGTATACT	NA	False	NA	NA	False	NA	NA	NA	1087	11825	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3171_10727_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142600	SIRV6	+	1541	10	NNC	SIRV6A	novel	1537	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	10272.8098828358	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATACTTAGTTCAATCTTC	NA	False	NA	NA	False	NA	NA	NA	1087	11838	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3171_10727_10819_11034_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142601	SIRV6	+	1533	10	NNC	SIRV6A	novel	1528	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9600.63413929222	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGACCGGGAGTATACT	NA	False	NA	NA	False	NA	NA	NA	1087	11825	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031_11114_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142602	SIRV6	+	1541	10	NNC	SIRV6A	novel	1537	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	10272.8098828358	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATACTTAGTTCAATCTTC	NA	False	NA	NA	False	NA	NA	NA	1087	11838	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10721_10819_11034_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142603	SIRV6	+	1526	10	NNC	SIRV6A	novel	1528	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	8787.83872781999	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGACCGGGAGTATACT	NA	False	NA	NA	False	NA	NA	NA	1087	11825	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1642_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142604	SIRV6	+	1531	10	NNC	SIRV6A	novel	1528	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9613.05668169246	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGACCGGGAGTATACT	NA	False	NA	NA	False	NA	NA	NA	1087	11825	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10721_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142605	SIRV6	+	1543	10	NNC	SIRV6A	novel	1537	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	10250.4060130367	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATACTTAGTTCAATCTTC	NA	False	NA	NA	False	NA	NA	NA	1087	11838	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11034_11114_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142606	SIRV6	+	1523	10	NNC	SIRV6A	novel	1528	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8788.21770579476	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGACCGGGAGTATACT	NA	False	NA	NA	False	NA	NA	NA	1087	11825	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1645_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142611	SIRV6	+	1546	10	NNC	SIRV6A	novel	1537	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9140.21704229429	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATACTTAGTTCAATCTTC	NA	False	NA	NA	False	NA	NA	NA	1087	11838	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_1845_2035_2470_2621_2740_2829_3106_3165_10724_10819_11034_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142623	SIRV6	+	1543	10	NNC	SIRV6A	novel	1537	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10380.8427486808	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATACTTAGTTCAATCTTC	NA	False	NA	NA	False	NA	NA	NA	1087	11838	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1741_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11034_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142629	SIRV6	+	1535	10	NNC	SIRV6A	novel	1537	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	10266.6577813814	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATACTTAGTTCAATCTTC	NA	False	NA	NA	False	NA	NA	NA	1087	11838	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10727_10819_11034_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142653	SIRV6	+	1540	10	NNC	SIRV6A	novel	1537	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9551.11471614637	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATACTTAGTTCAATCTTC	NA	False	NA	NA	False	NA	NA	NA	1087	11838	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1189_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11034_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142654	SIRV6	+	1530	10	NNC	SIRV6A	novel	1528	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9057.66012762978	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGACCGGGAGTATACT	NA	False	NA	NA	False	NA	NA	NA	1087	11825	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1189_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142663	SIRV6	+	571	8	NNC	SIRV6A	novel	574	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8378.86249890224	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCCTAATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	1122	11279	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1645_1736_2780_2829_3106_3165_10724_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142664	SIRV6	+	581	8	NNC	SIRV6A	novel	574	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8442.51266640738	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCCTAATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	1122	11279	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1741_2780_2829_3106_3165_10724_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142673	SIRV6	+	573	8	NNC	SIRV6A	novel	574	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	42	junction_5	9229.86624927966	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCCTAATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	1122	11279	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_2780_2829_3106_3165_10727_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142677	SIRV6	+	578	8	NNC	SIRV6A	novel	574	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8692.54531897585	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCCTAATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	1122	11279	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1189_1468_1535_1640_1736_2780_2829_3106_3165_10724_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142679	SIRV6	+	580	8	NNC	SIRV6A	novel	574	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	9236.09925393677	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCCTAATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	1123	11279	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_2780_2829_3106_3165_10724_10819_11031_11114_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142690	SIRV6	+	568	8	NNC	SIRV6A	novel	574	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	9000.18610011675	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCCTAATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	1124	11279	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_2780_2829_3106_3165_10724_10819_11037_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142691	SIRV6	+	566	8	NNC	SIRV6A	novel	574	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9380.68398359096	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCCTAATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	1124	11279	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1645_1736_2780_2829_3106_3165_10724_10819_11034_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142692	SIRV6	+	584	8	NNC	SIRV6A	novel	574	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8378.86249890224	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCCTAATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	1124	11279	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1527_1622_1736_2780_2829_3106_3165_10724_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142694	SIRV6	+	578	8	NNC	SIRV6A	novel	574	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8378.86249890224	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCCTAATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	1124	11279	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1527_1628_1736_2780_2829_3106_3165_10724_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142695	SIRV6	+	561	8	NNC	SIRV6A	novel	574	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8378.86249890224	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCCTAATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	1124	11279	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1527_1645_1736_2780_2829_3106_3165_10724_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142696	SIRV6	+	583	8	NNC	SIRV6A	novel	574	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9241.41984187914	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCCTAATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	1124	11279	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_2780_2829_3106_3171_10721_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142698	SIRV6	+	568	8	NNC	SIRV6A	novel	574	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	42	junction_5	10545.939346207	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCCTAATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	1124	11279	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_2780_2829_3106_3165_10727_10819_11034_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142701	SIRV6	+	580	8	NNC	SIRV6A	novel	574	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9241.41984187914	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCCTAATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	1124	11279	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_2780_2829_3106_3171_10724_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142705	SIRV6	+	577	8	NNC	SIRV6A	novel	574	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9241.41984187914	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCCTAATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	1124	11279	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_2780_2829_3106_3171_10727_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142741	SIRV6	+	1096	9	NNC	SIRV6A	novel	1088	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	8239.38325968637	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1130	11331	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_1845_2035_2470_2621_2740_2829_3106_3165_10724_10819_11031
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142742	SIRV6	+	1091	9	NNC	SIRV6A	novel	1088	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	10118.3663052639	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1130	11331	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2737_2829_3106_3165_10724_10819_11031
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142743	SIRV6	+	1085	9	NNC	SIRV6A	novel	1088	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	10133.1076111613	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1130	11331	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10727_10819_11031
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142747	SIRV6	+	563	4	NNC	SIRV6A	novel	574	4	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	12097.1828125395	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCAGTCAAGTCGTAG	NA	False	NA	NA	False	NA	NA	NA	1130	2540	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1736_1856_2027_2470
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142748	SIRV6	+	1086	9	NNC	SIRV6A	novel	1088	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	9209.36956311343	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1130	11331	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1642_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142750	SIRV6	+	560	4	NNC	SIRV6A	novel	574	4	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	10529.1711924538	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCAGTCAAGTCGTAG	NA	False	NA	NA	False	NA	NA	NA	1130	2540	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1736_1845_2035_2492
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142751	SIRV6	+	1091	9	NNC	SIRV6A	novel	1088	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	10141.2029850691	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1130	11331	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3171_10727_10819_11031
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142752	SIRV6	+	579	4	NNC	SIRV6A	novel	574	4	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	12097.1828125395	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCAGTCAAGTCGTAG	NA	False	NA	NA	False	NA	NA	NA	1130	2540	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1741_1845_2027_2470
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142753	SIRV6	+	568	4	NNC	SIRV6A	novel	574	4	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	12097.1828125395	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCAGTCAAGTCGTAG	NA	False	NA	NA	False	NA	NA	NA	1130	2540	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1741_1856_2027_2470
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142756	SIRV6	+	1094	9	NNC	SIRV6A	novel	1088	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	10141.2029850691	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1130	11331	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3171_10724_10819_11031
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142760	SIRV6	+	1082	9	NNC	SIRV6A	novel	1088	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	9824.58447912684	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1130	11331	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11037
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142765	SIRV6	+	1099	9	NNC	SIRV6A	novel	1088	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	10141.2029850691	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1130	11331	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_1845_2035_2470_2621_2740_2829_3106_3165_10721_10819_11031
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142767	SIRV6	+	1091	9	NNC	SIRV6A	novel	1088	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	10141.2029850691	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1130	11331	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10721_10819_11031
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142805	SIRV6	+	497	4	NNC	SIRV6A	novel	485	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10529.1711924538	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAAGTCAAGCCATTGC	NA	False	NA	NA	False	NA	NA	NA	1135	2120	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1527_1622_1736_1845
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142806	SIRV6	+	481	4	NNC	SIRV6A	novel	485	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12563.7680476661	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAAGTCAAGCCATTGC	NA	False	NA	NA	False	NA	NA	NA	1135	2120	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1741_1856
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142807	SIRV6	+	474	4	NNC	SIRV6A	novel	485	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10529.1711924538	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAAGTCAAGCCATTGC	NA	False	NA	NA	False	NA	NA	NA	1135	2120	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1527_1645_1736_1845
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142809	SIRV6	+	492	4	NNC	SIRV6A	novel	485	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12563.7680476661	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAAGTCAAGCCATTGC	NA	False	NA	NA	False	NA	NA	NA	1135	2120	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1741_1845
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142819	SIRV6	+	489	4	NNC	SIRV6A	novel	485	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11260.4577270297	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAAGTCAAGCCATTGC	NA	False	NA	NA	False	NA	NA	NA	1135	2120	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1189_1468_1535_1640_1736_1845
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142821	SIRV6	+	486	4	NNC	SIRV6A	novel	485	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10529.1711924538	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAAGTCAAGCCATTGC	NA	False	NA	NA	False	NA	NA	NA	1136	2120	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1517_1622_1736_1845
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142822	SIRV6	+	476	4	NNC	SIRV6A	novel	485	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10529.1711924538	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAAGTCAAGCCATTGC	NA	False	NA	NA	False	NA	NA	NA	1136	2120	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1187_1468_1527_1642_1736_1845
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142835	SIRV6	+	452	3	NNC	SIRV6A	novel	454	3	NA	NA	-2	1	intron_retention	FALSE	canonical	0	0	junction_2	1328	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTGTTTATAGTTTAC	NA	False	NA	NA	False	NA	NA	NA	1301	1951	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1382_1468_1535_1645
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142838	SIRV6	+	450	3	NNC	SIRV6A	novel	454	3	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	13771	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGTGTTTATAGTTTA	NA	False	NA	NA	False	NA	NA	NA	1302	1950	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1377_1468_1535_1640
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142842	SIRV6	+	445	3	NNC	SIRV6A	novel	454	3	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_2	1328	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGTGTTTATAGTTTA	NA	False	NA	NA	False	NA	NA	NA	1302	1950	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1382_1468_1527_1642
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142843	SIRV6	+	465	3	NNC	SIRV6A	novel	454	3	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_2	1328	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGTGTTTATAGTTTA	NA	False	NA	NA	False	NA	NA	NA	1302	1950	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1382_1468_1527_1622
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142844	SIRV6	+	455	3	NNC	SIRV6A	novel	454	3	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_2	1328	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGTGTTTATAGTTTA	NA	False	NA	NA	False	NA	NA	NA	1302	1950	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1382_1468_1517_1622
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142845	SIRV6	+	447	3	NNC	SIRV6A	novel	454	3	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_2	1328	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGTGTTTATAGTTTA	NA	False	NA	NA	False	NA	NA	NA	1302	1950	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_1382_1468_1527_1640
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142883	SIRV6	+	531	4	NNC	SIRV6A	novel	531	4	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	1	42	junction_3	5866.69727264744	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGAAAAAGTAATAGTGCA	NA	False	NA	NA	False	NA	NA	NA	2283	10789	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_2621_2740_2815_3106_3165_10727
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142893	SIRV6	+	1360	5	NNC	SIRV6A	novel	1163	5	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_3	8149.89660977365	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAAAATGGGGTTTGCC	NA	False	NA	NA	False	ATTAAA	-5	NA	2284	11690	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_2621_2740_2829_3106_3171_10721_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142894	SIRV6	+	541	4	NNC	SIRV6A	novel	531	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5877.64677022663	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2284	10788	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_2621_2740_2815_3106_3171_10721
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142902	SIRV6	+	1348	5	NNC	SIRV6A	novel	1163	5	NA	NA	-1	0	intron_retention	FALSE	canonical	1	42	junction_3	8132.93993584116	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAAAATGGGGTTTGCC	NA	False	NA	NA	False	ATTAAA	-5	NA	2284	11690	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_2621_2740_2829_3106_3165_10727_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142913	SIRV6	+	536	3	NNC	SIRV6A	novel	545	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6451	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2284	10788	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_2621_2740_2874_10721
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142916	SIRV6	+	1357	5	NNC	SIRV6A	novel	1163	5	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_3	8149.89660977365	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAAAATGGGGTTTGCC	NA	False	NA	NA	False	ATTAAA	-5	NA	2284	11690	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_2621_2740_2829_3106_3171_10724_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142929	SIRV6	+	550	4	NNC	SIRV6A	novel	545	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9330.37066073297	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2284	10788	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_2625_2740_2829_3106_3165_10724
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142933	SIRV6	+	552	4	NNC	SIRV6A	novel	545	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9330.37066073297	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2284	10788	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_2627_2740_2829_3106_3165_10724
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142934	SIRV6	+	543	4	NNC	SIRV6A	novel	545	4	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9330.37066073297	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGAAAAAGTAATAGTGCA	NA	False	NA	NA	False	NA	NA	NA	2284	10789	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_2627_2750_2829_3106_3165_10724
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142941	SIRV6	-	191	1	FSM	SIRV6C	SIRV618	189	1	-1	-1	-1	1	mono-exon	FALSE	NA	NA	NA	NA	NA	272	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTCTAGCTGTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	2548	2357	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_SIRV6_-_2400_2500
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142968	SIRV6	+	459	5	NNC	SIRV6A	novel	459	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8179.09314961017	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACTGTATCGGAGACG	NA	False	NA	NA	False	AAAAAG	-20	NA	2516	10818	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_2621_2740_2829_3106_3171_7814_7924_10724
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142969	SIRV6	+	456	5	NNC	SIRV6A	novel	459	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8179.09314961017	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACTGTATCGGAGACG	NA	False	NA	NA	False	AAAAAG	-20	NA	2516	10818	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_2621_2740_2829_3106_3152_7798_7924_10724
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142971	SIRV6	+	468	5	NNC	SIRV6A	novel	459	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8718.47559783246	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACTGTATCGGAGACG	NA	False	NA	NA	False	AAAAAG	-20	NA	2516	10818	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_2621_2737_2829_3106_3165_7805_7924_10721
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142974	SIRV6	+	452	5	NNC	SIRV6A	novel	459	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8230.433402926	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACTGTATCGGAGACG	NA	False	NA	NA	False	AAAAAG	-20	NA	2516	10818	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_2621_2750_2829_3106_3165_7805_7924_10724
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142975	SIRV6	+	471	5	NNC	SIRV6A	novel	459	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8921.53921697372	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACTGTATCGGAGACG	NA	False	NA	NA	False	AAAAAG	-20	NA	2516	10818	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_2621_2740_2829_3106_3171_7805_7924_10721
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142979	SIRV6	+	453	5	NNC	SIRV6A	novel	459	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8179.09314961017	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACTGTATCGGAGACG	NA	False	NA	NA	False	AAAAAG	-20	NA	2516	10818	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_2621_2740_2829_3106_3165_7814_7924_10724
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142983	SIRV6	+	459	5	NNC	SIRV6A	novel	459	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8230.433402926	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACTGTATCGGAGACG	NA	False	NA	NA	False	AAAAAG	-20	NA	2516	10818	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_2621_2743_2829_3106_3165_7805_7924_10724
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142995	SIRV6	+	466	5	NNC	SIRV6A	novel	459	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8230.433402926	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACTGTATCGGAGACG	NA	False	NA	NA	False	AAAAAG	-20	NA	2516	10818	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_2625_2740_2829_3106_3165_7805_7924_10724
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000142997	SIRV6	+	458	5	NNC	SIRV6A	novel	459	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8230.433402926	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACTGTATCGGAGACG	NA	False	NA	NA	False	AAAAAG	-20	NA	2516	10818	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_2627_2750_2829_3106_3165_7805_7924_10724
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143002	SIRV6	+	386	4	FSM	SIRV6A	SIRV608	377	4	-5	-4	-5	4	multi-exon	FALSE	canonical	3	18415	junction_1	2118.18355095954	4790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTAGCCTGCCTAATTG	NA	False	NA	NA	False	NA	NA	NA	3018	11274	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_SIRV6_+_3165_10724_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143012	SIRV6	+	375	4	NNC	SIRV6A	novel	377	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	42	junction_1	10014.1661437963	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	3022	11270	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_3165_10727_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143015	SIRV6	+	372	4	NNC	SIRV6A	novel	377	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8778.41771366318	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	3022	11270	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_3165_10724_10819_11037_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143016	SIRV6	+	372	4	NNC	SIRV6A	novel	377	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	42	junction_1	8615.5140299346	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	3022	11270	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_3165_10727_10819_11034_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143017	SIRV6	+	384	4	NNC	SIRV6A	novel	377	4	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9969.73374212616	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTATTAGCCTGCCTAA	NA	False	NA	NA	False	NA	NA	NA	3022	11271	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_3165_10724_10819_11031_11114_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143019	SIRV6	+	380	4	NNC	SIRV6A	novel	377	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8434.67479449498	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	3022	11270	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_3165_10724_10819_11034_11114_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143022	SIRV6	+	378	4	NNC	SIRV6A	novel	377	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8626.27277565462	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	3022	11270	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_3165_10721_10819_11034_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143038	SIRV6	+	381	4	NNC	SIRV6A	novel	377	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10033.6625859598	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	3022	11270	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_3171_10727_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143039	SIRV6	+	378	4	NNC	SIRV6A	novel	377	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8626.27277565462	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	3022	11270	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_3171_10727_10819_11034_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143040	SIRV6	+	387	4	NNC	SIRV6A	novel	377	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10033.6625859598	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	3022	11270	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_3171_10721_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143042	SIRV6	+	385	4	NNC	SIRV6A	novel	377	4	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10033.6625859598	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTATTAGCCTGCCTAA	NA	False	NA	NA	False	NA	NA	NA	3022	11271	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_3171_10724_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143052	SIRV6	+	1323	6	FSM	SIRV6A	SIRV613	1311	6	-5	-7	-5	5	multi-exon	FALSE	canonical	3	472	junction_2	9686.74001715748	2932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGGGAGTATACTTAGTTC	NA	False	NA	NA	False	NA	NA	NA	3100	11831	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_SIRV6_+_3165_7104_7449_7805_7924_10724_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143053	SIRV6	+	1311	6	NNC	SIRV6A	novel	1311	6	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9774.15061066689	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3100	11824	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_3165_7104_7453_7814_7924_10724_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143056	SIRV6	+	1321	6	NNC	SIRV6A	novel	1311	6	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8875.54686540497	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3100	11824	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_3165_7104_7449_7805_7924_10724_10819_11031_11114_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143061	SIRV6	+	1322	6	NNC	SIRV6A	novel	1311	6	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9780.5610800199	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3100	11824	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_3171_7104_7449_7805_7924_10724_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143067	SIRV6	+	1308	6	NNC	SIRV6A	novel	1311	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	10199.8444694025	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3105	11824	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_3165_7104_7449_7805_7924_10727_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143068	SIRV6	+	1308	6	NIC	SIRV6A	novel	1311	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	472	junction_2	7056.57479518215	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3105	11824	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_SIRV6_+_3165_7104_7449_7805_7924_10724_10819_11034_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143069	SIRV6	+	1311	6	NNC	SIRV6A	novel	1311	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7329.53798271078	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3105	11824	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_3165_7104_7449_7805_7924_10721_10819_11034_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143071	SIRV6	+	1303	6	NNC	SIRV6A	novel	1311	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9774.15061066689	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3105	11824	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_3165_7104_7453_7817_7924_10724_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143073	SIRV6	+	1320	6	NNC	SIRV6A	novel	1311	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8931.16461834625	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3105	11824	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_3165_7104_7453_7805_7924_10724_10819_11031_11114_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143074	SIRV6	+	1318	6	NNC	SIRV6A	novel	1311	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10276.3448287803	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3105	11824	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_3165_7104_7453_7805_7924_10721_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143076	SIRV6	+	1312	6	NNC	SIRV6A	novel	1311	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7117.97039611714	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3105	11824	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_3165_7104_7453_7805_7924_10724_10819_11034_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143077	SIRV6	+	1305	6	NNC	SIRV6A	novel	1311	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7186.824099698	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3105	11824	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_3165_7104_7449_7805_7924_10724_10819_11037_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143082	SIRV6	+	1319	6	NNC	SIRV6A	novel	1311	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	7186.824099698	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3105	11824	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_3165_7104_7449_7805_7924_10724_10827_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143084	SIRV6	+	1313	6	NNC	SIRV6A	novel	1311	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	7185.26481070809	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3105	11824	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_3165_7104_7449_7805_7924_10724_10827_11037_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143098	SIRV6	+	1321	6	NNC	SIRV6A	novel	1311	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9866.16850454116	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3105	11824	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_3171_7104_7453_7805_7924_10724_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143099	SIRV6	+	1320	6	NNC	SIRV6A	novel	1311	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10281.9428047427	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3105	11824	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_3171_7104_7449_7805_7924_10721_10819_11031_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143114	SIRV6	+	783	3	ISM	SIRV6A	SIRV604	1537	10	9148	506	-2	0	3prime_fragment	FALSE	canonical	3	1095	junction_1	8863.5	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	10235	11331	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	ISM_SIRV6_+_10819_11034_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143117	SIRV6	+	778	3	NNC	SIRV6A	novel	783	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9411	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAGAGCAATCAACTCA	NA	False	NA	NA	False	NA	NA	NA	10236	11330	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_10819_11037_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143118	SIRV6	+	790	3	NNC	SIRV6A	novel	783	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11549	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	10236	11331	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_10819_11031_11114_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143125	SIRV6	+	785	3	NNC	SIRV6A	novel	783	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	9405	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAGAGCAATCAACTCA	NA	False	NA	NA	False	NA	NA	NA	10237	11330	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV6_+_10827_11037_11109_11205
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143134	SIRV6001	+	1440	1	FSM	SIRV6001A	SIRV6001	6000	1	0	4560	0	-4560	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAAAAGTAAACTACCT	NA	False	NA	NA	False	NA	NA	NA	0	1440	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_SIRV6001_+_0_1400
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143145	SIRV7	-	2537	5	FSM	SIRV7A	SIRV703	2498	5	-39	0	0	0	multi-exon	FALSE	canonical	3	1087	junction_2	1651.92015167199	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	147957	1000	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_SIRV7_-_2676_2993_3112_3809_3897_114680_114989_147608
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143147	SIRV7	-	2247	6	NNC	SIRV7A	novel	2247	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1412.33715521472	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	114916	1000	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV7_-_2676_2993_3115_4098_4180_4725_4811_43028_43078_114680
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143152	SIRV7	-	2243	6	NNC	SIRV7A	novel	2247	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1373.66872280037	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	114916	1000	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV7_-_2676_2993_3112_4095_4180_4725_4811_43028_43074_114680
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143156	SIRV7	-	2498	5	NNC	SIRV7A	novel	2498	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	1954.93586851334	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	147918	1000	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV7_-_2676_2993_3115_3812_3897_114680_114989_147608
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143166	SIRV7	-	2472	5	FSM	SIRV7A	SIRV701	2462	5	-8	-2	-6	-1	multi-exon	FALSE	canonical	3	1923	junction_2	1231.81783860277	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTGTTAATATGAATCAA	NA	False	NA	NA	False	TATAAA	-21	NA	147931	1001	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	FSM_SIRV7_-_2676_2993_3112_43028_43078_114680_114989_147608
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143168	SIRV7	-	2472	5	NNC	SIRV7A	novel	2462	5	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1290.30122452085	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTGTTAATATGAATCAA	NA	False	NA	NA	False	TATAAA	-21	NA	147925	1001	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV7_-_2676_2993_3112_43028_43078_114680_114989_147602
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143170	SIRV7	-	2469	5	NNC	SIRV7A	novel	2462	5	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1290.30122452085	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTGTTAATATGAATCAA	NA	False	NA	NA	False	TATAAA	-21	NA	147931	1001	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV7_-_2676_2993_3112_43028_43078_114680_114989_147611
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143179	SIRV7	-	2462	5	NNC	SIRV7A	novel	2462	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1530.79576936311	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTAGTGTTAATATGAA	NA	False	NA	NA	False	TATAAA	-17	NA	147925	1005	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV7_-_2676_2993_3115_43028_43078_114680_114989_147611
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143199	SIRV7	-	249	1	NIC	SIRV7A	novel	428	3	NA	NA	58640	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTCGTATTTGCTGCT	NA	False	NA	NA	False	ATTAAA	-33	NA	56098	55849	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NIC_SIRV7_-_55800_56100
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143200	SIRV7	+	376	2	Antisense	novelGene_SIRV7A_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAATGCGATAAATTGTG	NA	False	NA	NA	False	NA	NA	NA	55849	78964	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	Antisense_SIRV7_+_56111_78849
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143211	SIRV7	-	945	5	NNC	SIRV7A	novel	949	5	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	2429.24714417862	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147957	56031	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV7_-_56086_70877_70988_78841_78966_114680_114989_147608
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143214	SIRV7	-	957	5	NNC	SIRV7A	novel	949	5	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	2066.85127367694	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147957	56031	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV7_-_56098_70883_70988_78841_78966_114680_114989_147602
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143215	SIRV7	-	957	5	NNC	SIRV7A	novel	949	5	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	2429.24714417862	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147957	56031	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV7_-_56098_70877_70988_78841_78966_114680_114989_147608
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143216	SIRV7	-	941	5	NNC	SIRV7A	novel	949	5	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	2429.24714417862	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147957	56031	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV7_-_56098_70893_70988_78841_78966_114680_114989_147608
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143217	SIRV7	-	944	5	NNC	SIRV7A	novel	949	5	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	2114.3302130935	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147957	56031	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV7_-_56098_70883_70981_78841_78966_114680_114989_147608
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143219	SIRV7	-	962	5	NNC	SIRV7A	novel	949	5	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	2114.3302130935	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147957	56031	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV7_-_56098_70883_70981_78823_78966_114680_114989_147608
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143221	SIRV7	-	941	5	NNC	SIRV7A	novel	949	5	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	1362.69097285481	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147957	56031	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV7_-_56098_70883_70981_78841_78966_114680_114989_147611
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143227	SIRV7	-	937	5	NNC	SIRV7A	novel	949	5	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	2066.85127367694	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147957	56031	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV7_-_56098_70883_70988_78841_78966_114680_114989_147622
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143248	SIRV7	-	916	5	NNC	SIRV7A	novel	949	5	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_1	1966.74216662988	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAAGAGATCGACGAAGT	NA	False	NA	NA	False	NA	NA	NA	147957	56032	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV7_-_56086_70877_70988_78841_78966_114680_114961_147608
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143252	SIRV7	-	928	5	NNC	SIRV7A	novel	949	5	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_1	1966.74216662988	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAAGAGATCGACGAAGT	NA	False	NA	NA	False	NA	NA	NA	147957	56032	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV7_-_56098_70877_70988_78841_78966_114680_114961_147608
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143253	SIRV7	-	891	5	NNC	SIRV7A	novel	949	5	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_3	1736.72714825905	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAAGAGATCGACGAAGT	NA	False	NA	NA	False	NA	NA	NA	147957	56032	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV7_-_56098_70883_70988_78841_78935_114680_114961_147608
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143254	SIRV7	-	915	5	NNC	SIRV7A	novel	949	5	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_2	1362.69097285481	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAAGAGATCGACGAAGT	NA	False	NA	NA	False	NA	NA	NA	147957	56032	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV7_-_56098_70883_70981_78841_78966_114680_114961_147608
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143255	SIRV7	-	912	5	NNC	SIRV7A	novel	949	5	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_1	1966.74216662988	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAAGAGATCGACGAAGT	NA	False	NA	NA	False	NA	NA	NA	147957	56032	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV7_-_56098_70893_70988_78841_78966_114680_114961_147608
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143257	SIRV7	-	908	5	NNC	SIRV7A	novel	949	5	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_3	2066.85127367694	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAAGAGATCGACGAAGT	NA	False	NA	NA	False	NA	NA	NA	147957	56032	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV7_-_56098_70883_70988_78841_78966_114680_114961_147622
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143258	SIRV7	-	912	5	NNC	SIRV7A	novel	949	5	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_2	1362.69097285481	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAAGAGATCGACGAAGT	NA	False	NA	NA	False	NA	NA	NA	147957	56032	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV7_-_56098_70883_70981_78841_78966_114680_114961_147611
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143259	SIRV7	-	879	5	NNC	SIRV7A	novel	949	5	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1736.72714825905	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAAGAGATCGACGAAGT	NA	False	NA	NA	False	NA	NA	NA	147957	56032	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV7_-_56098_70883_70988_78841_78923_114680_114961_147608
ONT_CapTrap_Mouse_MpreCap_0+_F121-9_Total_PrimeScriptII.NAM_TM_000000143260	SIRV7	-	929	5	NNC	SIRV7A	novel	949	5	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_2	1362.69097285481	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAAGAGATCGACGAAGT	NA	False	NA	NA	False	NA	NA	NA	147957	56032	ES_CapTrap_ONT	iso_detect_ref_crg_CapTrap_ONT	NNC_SIRV7_-_56098_70883_70995_78841_78966_114680_114961_147608
