#Partially deleted in new
chr1	3475282	3475322	chr1:3475282-3475322	1	+
#Partially deleted in new
chr1	31940034	31940074	chr1:31940034-31940074	1	+
#Deleted in new
chr1	36537157	36537197	chr1:36537157-36537197	1	+
#Deleted in new
chr1	46859280	46859320	chr1:46859280-46859320	1	+
#Deleted in new
chr1	114084554	114084594	chr1:114084554-114084594	1	+
#Partially deleted in new
chr1	115015894	115015934	chr1:115015894-115015934	1	+
#Partially deleted in new
chr1	115015894	115015934	chr1:115015894-115015934	1	+
#Partially deleted in new
chr1	117286316	117286356	chr1:117286316-117286356	1	+
#Deleted in new
chr1	143283631	143283671	chr1:143283631-143283671	1	+
#Partially deleted in new
chr1	161962950	161962990	chr1:161962950-161962990	1	+
#Deleted in new
chr1	184003412	184003452	chr1:184003412-184003452	1	+
#Partially deleted in new
chr1	212999331	212999371	chr1:212999331-212999371	1	+
#Deleted in new
chr1	214574215	214574255	chr1:214574215-214574255	1	+
#Partially deleted in new
chr1	217958866	217958906	chr1:217958866-217958906	1	+
#Deleted in new
chr1	225027514	225027554	chr1:225027514-225027554	1	+
#Deleted in new
chr1	232861056	232861096	chr1:232861056-232861096	1	+
#Partially deleted in new
chr1	235838742	235838782	chr1:235838742-235838782	1	+
#Deleted in new
chr1	244739583	244739623	chr1:244739583-244739623	1	+
#Deleted in new
chr10	654472	654512	chr10:654472-654512	1	+
#Deleted in new
chr10	13402069	13402109	chr10:13402069-13402109	1	+
#Partially deleted in new
chr10	35680052	35680092	chr10:35680052-35680092	1	+
#Deleted in new
chr10	36798049	36798089	chr10:36798049-36798089	1	+
#Deleted in new
chr10	47359121	47359161	chr10:47359121-47359161	1	+
#Deleted in new
chr10	49066414	49066454	chr10:49066414-49066454	1	+
#Deleted in new
chr10	71464473	71464513	chr10:71464473-71464513	1	+
#Deleted in new
chr10	88890239	88890279	chr10:88890239-88890279	1	+
#Deleted in new
chr10	98951634	98951674	chr10:98951634-98951674	1	+
#Deleted in new
chr10	117995371	117995411	chr10:117995371-117995411	1	+
#Partially deleted in new
chr11	4485903	4485943	chr11:4485903-4485943	1	+
#Deleted in new
chr11	92993908	92993948	chr11:92993908-92993948	1	+
#Partially deleted in new
chr11	106101177	106101217	chr11:106101177-106101217	1	+
#Deleted in new
chr11	129457042	129457082	chr11:129457042-129457082	1	+
#Deleted in new
chr12	10063574	10063614	chr12:10063574-10063614	1	+
#Partially deleted in new
chr12	32109061	32109101	chr12:32109061-32109101	1	+
#Partially deleted in new
chr12	39331955	39331995	chr12:39331955-39331995	1	+
#Deleted in new
chr12	43549937	43549977	chr12:43549937-43549977	1	+
#Partially deleted in new
chr12	43850390	43850430	chr12:43850390-43850430	1	+
#Deleted in new
chr12	131920068	131920108	chr12:131920068-131920108	1	+
#Partially deleted in new
chr13	78476880	78476920	chr13:78476880-78476920	1	+
#Deleted in new
chr13	79734450	79734490	chr13:79734450-79734490	1	+
#Deleted in new
chr13	98853782	98853822	chr13:98853782-98853822	1	+
#Partially deleted in new
chr14	67960200	67960240	chr14:67960200-67960240	1	+
#Deleted in new
chr14	77736142	77736182	chr14:77736142-77736182	1	+
#Partially deleted in new
chr14	78119728	78119768	chr14:78119728-78119768	1	+
#Deleted in new
chr14	89397440	89397480	chr14:89397440-89397480	1	+
#Partially deleted in new
chr14	93088871	93088911	chr14:93088871-93088911	1	+
#Deleted in new
chr14	93094214	93094254	chr14:93094214-93094254	1	+
#Deleted in new
chr14	95950654	95950694	chr14:95950654-95950694	1	+
#Deleted in new
chr14	99887253	99887293	chr14:99887253-99887293	1	+
#Partially deleted in new
chr15	34446982	34447022	chr15:34446982-34447022	1	+
#Partially deleted in new
chr15	34453736	34453776	chr15:34453736-34453776	1	+
#Partially deleted in new
chr15	35185339	35185379	chr15:35185339-35185379	1	+
#Partially deleted in new
chr15	49917790	49917830	chr15:49917790-49917830	1	+
#Partially deleted in new
chr15	62554681	62554721	chr15:62554681-62554721	1	+
#Deleted in new
chr15	79320966	79321006	chr15:79320966-79321006	1	+
#Partially deleted in new
chr15	80212454	80212494	chr15:80212454-80212494	1	+
#Partially deleted in new
chr16	24392955	24392995	chr16:24392955-24392995	1	+
#Partially deleted in new
chr16	55925139	55925179	chr16:55925139-55925179	1	+
#Partially deleted in new
chr16	75156013	75156053	chr16:75156013-75156053	1	+
#Deleted in new
chr17	4916168	4916208	chr17:4916168-4916208	1	+
#Deleted in new
chr17	8968696	8968736	chr17:8968696-8968736	1	+
#Deleted in new
chr17	16638053	16638093	chr17:16638053-16638093	1	+
#Deleted in new
chr17	18483851	18483891	chr17:18483851-18483891	1	+
#Deleted in new
chr17	19262785	19262825	chr17:19262785-19262825	1	+
#Deleted in new
chr17	20268453	20268493	chr17:20268453-20268493	1	+
#Deleted in new
chr17	22020723	22020763	chr17:22020723-22020763	1	+
#Deleted in new
chr17	26444109	26444149	chr17:26444109-26444149	1	+
#Deleted in new
chr17	37724028	37724068	chr17:37724028-37724068	1	+
#Deleted in new
chr17	37971523	37971563	chr17:37971523-37971563	1	+
#Partially deleted in new
chr17	41457790	41457830	chr17:41457790-41457830	1	+
#Partially deleted in new
chr17	75163981	75164021	chr17:75163981-75164021	1	+
#Partially deleted in new
chr18	11957060	11957100	chr18:11957060-11957100	1	+
#Partially deleted in new
chr18	29554115	29554155	chr18:29554115-29554155	1	+
#Deleted in new
chr18	33706010	33706050	chr18:33706010-33706050	1	+
#Deleted in new
chr18	34943238	34943278	chr18:34943238-34943278	1	+
#Deleted in new
chr19	2817359	2817399	chr19:2817359-2817399	1	+
#Partially deleted in new
chr19	24268340	24268380	chr19:24268340-24268380	1	+
#Deleted in new
chr19	36619442	36619482	chr19:36619442-36619482	1	+
#Deleted in new
chr19	36769187	36769227	chr19:36769187-36769227	1	+
#Deleted in new
chr19	47760165	47760205	chr19:47760165-47760205	1	+
#Partially deleted in new
chr19	49872388	49872428	chr19:49872388-49872428	1	+
#Deleted in new
chr19_gl000208_random	2786	2826	chr19_gl000208_random:2786-2826	1	+
#Deleted in new
chr2	9562441	9562481	chr2:9562441-9562481	1	+
#Deleted in new
chr2	23987124	23987164	chr2:23987124-23987164	1	+
#Deleted in new
chr2	73498609	73498649	chr2:73498609-73498649	1	+
#Deleted in new
chr2	153558200	153558240	chr2:153558200-153558240	1	+
#Deleted in new
chr2	156515013	156515053	chr2:156515013-156515053	1	+
#Partially deleted in new
chr20	46150131	46150171	chr20:46150131-46150171	1	+
#Deleted in new
chr20	46276018	46276058	chr20:46276018-46276058	1	+
#Partially deleted in new
chr20	47897723	47897763	chr20:47897723-47897763	1	+
#Deleted in new
chr20	62155002	62155042	chr20:62155002-62155042	1	+
#Deleted in new
chr20	62719984	62720024	chr20:62719984-62720024	1	+
#Partially deleted in new
chr21	16738175	16738215	chr21:16738175-16738215	1	+
#Partially deleted in new
chr21	34739916	34739956	chr21:34739916-34739956	1	+
#Partially deleted in new
chr21	44025372	44025412	chr21:44025372-44025412	1	+
#Partially deleted in new
chr22	25112715	25112755	chr22:25112715-25112755	1	+
#Deleted in new
chr22	33445227	33445267	chr22:33445227-33445267	1	+
#Deleted in new
chr22	36271101	36271141	chr22:36271101-36271141	1	+
#Deleted in new
chr22	41510773	41510813	chr22:41510773-41510813	1	+
#Deleted in new
chr22	50582498	50582538	chr22:50582498-50582538	1	+
#Partially deleted in new
chr3	13583790	13583830	chr3:13583790-13583830	1	+
#Deleted in new
chr3	27351475	27351515	chr3:27351475-27351515	1	+
#Partially deleted in new
chr3	47401726	47401766	chr3:47401726-47401766	1	+
#Deleted in new
chr3	79021846	79021886	chr3:79021846-79021886	1	+
#Deleted in new
chr3	113143503	113143543	chr3:113143503-113143543	1	+
#Partially deleted in new
chr3	129636411	129636451	chr3:129636411-129636451	1	+
#Deleted in new
chr3	129636612	129636652	chr3:129636612-129636652	1	+
#Deleted in new
chr3	146130453	146130493	chr3:146130453-146130493	1	+
#Deleted in new
chr3	157677792	157677832	chr3:157677792-157677832	1	+
#Deleted in new
chr3	167952245	167952285	chr3:167952245-167952285	1	+
#Partially deleted in new
chr3	175536800	175536840	chr3:175536800-175536840	1	+
#Deleted in new
chr3	185349366	185349406	chr3:185349366-185349406	1	+
#Partially deleted in new
chr3	196975288	196975328	chr3:196975288-196975328	1	+
#Partially deleted in new
chr4	6060428	6060468	chr4:6060428-6060468	1	+
#Deleted in new
chr4	6246296	6246336	chr4:6246296-6246336	1	+
#Deleted in new
chr4	13540755	13540795	chr4:13540755-13540795	1	+
#Partially deleted in new
chr4	78253985	78254025	chr4:78253985-78254025	1	+
#Partially deleted in new
chr4	78263388	78263428	chr4:78263388-78263428	1	+
#Partially deleted in new
chr4	78263549	78263589	chr4:78263549-78263589	1	+
#Partially deleted in new
chr4	99114795	99114835	chr4:99114795-99114835	1	+
#Deleted in new
chr4	105363320	105363360	chr4:105363320-105363360	1	+
#Deleted in new
chr4	130810940	130810980	chr4:130810940-130810980	1	+
#Partially deleted in new
chr4	140160492	140160532	chr4:140160492-140160532	1	+
#Deleted in new
chr4	142275009	142275049	chr4:142275009-142275049	1	+
#Partially deleted in new
chr4	152470063	152470103	chr4:152470063-152470103	1	+
#Deleted in new
chr4	167013275	167013315	chr4:167013275-167013315	1	+
#Deleted in new
chr4	187572812	187572852	chr4:187572812-187572852	1	+
#Deleted in new
chr4	190988787	190988827	chr4:190988787-190988827	1	+
#Deleted in new
chr5	73764245	73764285	chr5:73764245-73764285	1	+
#Deleted in new
chr5	110825308	110825348	chr5:110825308-110825348	1	+
#Deleted in new
chr5	122476202	122476242	chr5:122476202-122476242	1	+
#Deleted in new
chr5	123556783	123556823	chr5:123556783-123556823	1	+
#Partially deleted in new
chr5	128640096	128640136	chr5:128640096-128640136	1	+
#Deleted in new
chr5	138070341	138070381	chr5:138070341-138070381	1	+
#Partially deleted in new
chr5	158729039	158729079	chr5:158729039-158729079	1	+
#Partially deleted in new
chr5	158729039	158729079	chr5:158729039-158729079	1	+
#Partially deleted in new
chr6	4384445	4384485	chr6:4384445-4384485	1	+
#Partially deleted in new
chr6	4472064	4472104	chr6:4472064-4472104	1	+
#Deleted in new
chr6	4488709	4488749	chr6:4488709-4488749	1	+
#Partially deleted in new
chr6	17577427	17577467	chr6:17577427-17577467	1	+
#Deleted in new
chr6	22056680	22056720	chr6:22056680-22056720	1	+
#Deleted in new
chr6	23125952	23125992	chr6:23125952-23125992	1	+
#Partially deleted in new
chr6	24877976	24878016	chr6:24877976-24878016	1	+
#Deleted in new
chr6	24883488	24883528	chr6:24883488-24883528	1	+
#Deleted in new
chr6	31296312	31296352	chr6:31296312-31296352	1	+
#Partially deleted in new
chr6	31304824	31304864	chr6:31304824-31304864	1	+
#Partially deleted in new
chr6	31304982	31305022	chr6:31304982-31305022	1	+
#Deleted in new
chr6	80526381	80526421	chr6:80526381-80526421	1	+
#Deleted in new
chr6	86312871	86312911	chr6:86312871-86312911	1	+
#Deleted in new
chr6	111985320	111985360	chr6:111985320-111985360	1	+
#Deleted in new
chr6	118001600	118001640	chr6:118001600-118001640	1	+
#Split in new
chr6	118895596	118895636	chr6:118895596-118895636	1	+
#Split in new
chr6	118899942	118899982	chr6:118899942-118899982	1	+
#Partially deleted in new
chr6	122051683	122051723	chr6:122051683-122051723	1	+
#Partially deleted in new
chr6	152543436	152543476	chr6:152543436-152543476	1	+
#Deleted in new
chr7	27183660	27183700	chr7:27183660-27183700	1	+
#Partially deleted in new
chr7	70315038	70315078	chr7:70315038-70315078	1	+
#Deleted in new
chr7	73149316	73149356	chr7:73149316-73149356	1	+
#Deleted in new
chr7	79432274	79432314	chr7:79432274-79432314	1	+
#Deleted in new
chr7	99212282	99212322	chr7:99212282-99212322	1	+
#Deleted in new
chr7	138114677	138114717	chr7:138114677-138114717	1	+
#Partially deleted in new
chr7	150687795	150687835	chr7:150687795-150687835	1	+
#Partially deleted in new
chr7	152430546	152430586	chr7:152430546-152430586	1	+
#Partially deleted in new
chr8	9444855	9444895	chr8:9444855-9444895	1	+
#Partially deleted in new
chr8	54185428	54185468	chr8:54185428-54185468	1	+
#Deleted in new
chr8	69423483	69423523	chr8:69423483-69423523	1	+
#Partially deleted in new
chr8	123244801	123244841	chr8:123244801-123244841	1	+
#Partially deleted in new
chr8	140873314	140873354	chr8:140873314-140873354	1	+
#Partially deleted in new
chr8	140873413	140873453	chr8:140873413-140873453	1	+
#Partially deleted in new
chr9	89051994	89052034	chr9:89051994-89052034	1	+
#Partially deleted in new
chr9	90282243	90282283	chr9:90282243-90282283	1	+
#Partially deleted in new
chr9	119639553	119639593	chr9:119639553-119639593	1	+
#Deleted in new
chr9	138539960	138540000	chr9:138539960-138540000	1	+
#Deleted in new
chrUn_gl000225	46138	46178	chrUn_gl000225:46138-46178	1	+
#Partially deleted in new
chrX	43311770	43311810	chrX:43311770-43311810	1	+
#Partially deleted in new
chrX	44431770	44431810	chrX:44431770-44431810	1	+
#Deleted in new
chrX	47057099	47057139	chrX:47057099-47057139	1	+
#Deleted in new
chrX	54405260	54405300	chrX:54405260-54405300	1	+
#Deleted in new
chrX	98440970	98441010	chrX:98440970-98441010	1	+
#Deleted in new
chrX	100850172	100850212	chrX:100850172-100850212	1	+
#Partially deleted in new
chrX	123279792	123279832	chrX:123279792-123279832	1	+