#Deleted in new
chr1	125180040	125180337	chr1:125180040-125180337	1000	+
#Deleted in new
chr1	143191213	143191498	chr1:143191213-143191498	783	+
#Deleted in new
chr1	143231789	143232162	chr1:143231789-143232162	1000	+
#Deleted in new
chr1_KI270709v1_random	3903	4159	chr1_KI270709v1_random:3903-4159	316	+
#Deleted in new
chr4	49097193	49097449	chr4:49097193-49097449	369	+
#Deleted in new
chr4	49107302	49107567	chr4:49107302-49107567	1000	+
#Deleted in new
chr4	49109882	49110113	chr4:49109882-49110113	895	+
#Deleted in new
chr4	49643388	49643695	chr4:49643388-49643695	437	+
#Deleted in new
chr4	139518980	139519196	chr4:139518980-139519196	318	+
#Deleted in new
chr5	49599519	49599768	chr5:49599519-49599768	687	+
#Deleted in new
chr5	49600342	49600697	chr5:49600342-49600697	531	+
#Deleted in new
chr7	118741619	118741835	chr7:118741619-118741835	287	+
#Deleted in new
chr10	41912653	41913030	chr10:41912653-41913030	509	+
#Deleted in new
chr10	83924753	83924969	chr10:83924753-83924969	263	+
#Deleted in new
chr13	16008150	16008526	chr13:16008150-16008526	495	+
#Deleted in new
chr13	25150320	25150536	chr13:25150320-25150536	259	+
#Deleted in new
chr14_GL000225v1_random	50698	51031	chr14_GL000225v1_random:50698-51031	542	+
#Deleted in new
chr14_GL000225v1_random	131625	131881	chr14_GL000225v1_random:131625-131881	1000	+
#Deleted in new
chr14_GL000225v1_random	133533	134049	chr14_GL000225v1_random:133533-134049	1000	+
#Deleted in new
chr16	51264161	51264377	chr16:51264161-51264377	307	+
#Deleted in new
chr17_GL000205v2_random	72389	72725	chr17_GL000205v2_random:72389-72725	308	+
#Deleted in new
chr21	5216553	5216769	chr21:5216553-5216769	330	+
#Deleted in new
chr21	9907943	9908159	chr21:9907943-9908159	329	+
#Partially deleted in new
chr21	10417445	10418021	chr21:10417445-10418021	1000	+
#Partially deleted in new
chr22	18730450	18730830	chr22:18730450-18730830	1000	+
#Deleted in new
chr22_KI270733v1_random	158611	158841	chr22_KI270733v1_random:158611-158841	1000	+
#Deleted in new
chrUn_GL000224v1	1338	1572	chrUn_GL000224v1:1338-1572	432	+
#Deleted in new
chrUn_GL000224v1	3423	4136	chrUn_GL000224v1:3423-4136	1000	+
#Deleted in new
chrUn_KI270435v1	12450	12714	chrUn_KI270435v1:12450-12714	326	+
#Deleted in new
chrUn_KI270442v1	78444	78660	chrUn_KI270442v1:78444-78660	263	+
#Deleted in new
chrUn_KI270519v1	133626	133842	chrUn_KI270519v1:133626-133842	288	+
#Deleted in new
chrUn_KI270538v1	88708	88931	chrUn_KI270538v1:88708-88931	871	+
#Deleted in new
chrUn_KI270751v1	146242	146822	chrUn_KI270751v1:146242-146822	301	+