#Deleted in new
chr1	16614387	16614812	chr1:16614387-16614812	543	+
#Deleted in new
chr1	86839788	86840008	chr1:86839788-86840008	314	+
#Deleted in new
chr1	109282884	109283741	chr1:109282884-109283741	1000	+
#Deleted in new
chr1	125180040	125180337	chr1:125180040-125180337	1000	+
#Deleted in new
chr1	143231789	143232162	chr1:143231789-143232162	1000	+
#Partially deleted in new
chr1	230585189	230585409	chr1:230585189-230585409	384	+
#Deleted in new
chr1	234980516	234981459	chr1:234980516-234981459	1000	+
#Deleted in new
chr1	239956880	239957100	chr1:239956880-239957100	351	+
#Deleted in new
chr2	43539908	43540513	chr2:43539908-43540513	1000	+
#Deleted in new
chr2	89777372	89777552	chr2:89777372-89777552	247	+
#Deleted in new
chr2	89841199	89841419	chr2:89841199-89841419	396	+
#Deleted in new
chr2	145185968	145186519	chr2:145185968-145186519	347	+
#Deleted in new
chr2	206159110	206160138	chr2:206159110-206160138	1000	+
#Deleted in new
chr2	209653192	209653412	chr2:209653192-209653412	380	+
#Deleted in new
chr3	4807577	4807993	chr3:4807577-4807993	1000	+
#Deleted in new
chr3	44826158	44826378	chr3:44826158-44826378	404	+
#Partially deleted in new
chr3	57084815	57084995	chr3:57084815-57084995	206	+
#Deleted in new
chr3	65170393	65171244	chr3:65170393-65171244	1000	+
#Deleted in new
chr3	75669117	75669440	chr3:75669117-75669440	1000	+
#Deleted in new
chr3	102541034	102541214	chr3:102541034-102541214	210	+
#Deleted in new
chr3	129966122	129966342	chr3:129966122-129966342	364	+
#Deleted in new
chr3	141951886	141952422	chr3:141951886-141952422	1000	+
#Deleted in new
chr3	183499573	183499833	chr3:183499573-183499833	469	+
#Deleted in new
chr4	33349429	33349689	chr4:33349429-33349689	636	+
#Deleted in new
chr4	49092821	49093151	chr4:49092821-49093151	1000	+
#Deleted in new
chr4	49097193	49097449	chr4:49097193-49097449	369	+
#Deleted in new
chr4	49643388	49643695	chr4:49643388-49643695	437	+
#Deleted in new
chr4	54914789	54915009	chr4:54914789-54915009	319	+
#Partially deleted in new
chr4	75057659	75057879	chr4:75057659-75057879	381	+
#Partially deleted in new
chr4	106764835	106765055	chr4:106764835-106765055	394	+
#Partially deleted in new
chr5	99274096	99274316	chr5:99274096-99274316	400	+
#Deleted in new
chr5	138459068	138459971	chr5:138459068-138459971	633	+
#Deleted in new
chr6	3742759	3743304	chr6:3742759-3743304	551	+
#Deleted in new
chr6	24774651	24775457	chr6:24774651-24775457	1000	+
#Deleted in new
chr6	35601258	35603083	chr6:35601258-35603083	1000	+
#Partially deleted in new
chr6	35798417	35798677	chr6:35798417-35798677	659	+
#Deleted in new
chr6	56417793	56418013	chr6:56417793-56418013	447	+
#Deleted in new
chr6	61322782	61323298	chr6:61322782-61323298	1000	+
#Deleted in new
chr6	152272104	152272548	chr6:152272104-152272548	675	+
#Deleted in new
chr7	16397129	16400821	chr7:16397129-16400821	1000	+
#Deleted in new
chr7	21262257	21262437	chr7:21262257-21262437	198	+
#Deleted in new
chr7	46886715	46886935	chr7:46886715-46886935	359	+
#Deleted in new
chr7	63570690	63570910	chr7:63570690-63570910	382	+
#Deleted in new
chr7	91262940	91263160	chr7:91262940-91263160	363	+
#Deleted in new
chr7	121396082	121396725	chr7:121396082-121396725	709	+
#Deleted in new
chr7	137910621	137910881	chr7:137910621-137910881	740	+
#Deleted in new
chr7	139734125	139734913	chr7:139734125-139734913	1000	+
#Deleted in new
chr7	149431097	149431716	chr7:149431097-149431716	1000	+
#Deleted in new
chr7	149431815	149432406	chr7:149431815-149432406	1000	+
#Deleted in new
chr8	2236497	2236717	chr8:2236497-2236717	380	+
#Deleted in new
chr8	47627472	47628283	chr8:47627472-47628283	1000	+
#Deleted in new
chr8	57210674	57210938	chr8:57210674-57210938	967	+
#Deleted in new
chr8	87466642	87466902	chr8:87466642-87466902	414	+
#Deleted in new
chr8	101841239	101841459	chr8:101841239-101841459	383	+
#Deleted in new
chr8	127735127	127736737	chr8:127735127-127736737	1000	+
#Deleted in new
chr8	128176539	128177579	chr8:128176539-128177579	1000	+
#Deleted in new
chr9	26955856	26956663	chr9:26955856-26956663	763	+
#Deleted in new
chr9	63817084	63817538	chr9:63817084-63817538	451	+
#Deleted in new
chr9	70479948	70481252	chr9:70479948-70481252	1000	+
#Deleted in new
chr9	91192925	91194478	chr9:91192925-91194478	1000	+
#Deleted in new
chr9	127154777	127155141	chr9:127154777-127155141	673	+
#Partially deleted in new
chr10	1536380	1536560	chr10:1536380-1536560	180	+
#Deleted in new
chr10	38527361	38527874	chr10:38527361-38527874	937	+
#Deleted in new
chr10	41859663	41859913	chr10:41859663-41859913	541	+
#Deleted in new
chr10	41881763	41882045	chr10:41881763-41882045	388	+
#Deleted in new
chr10	96955238	96955889	chr10:96955238-96955889	1000	+
#Deleted in new
chr10	96955948	96956609	chr10:96955948-96956609	1000	+
#Deleted in new
chr10	133689306	133689536	chr10:133689306-133689536	714	+
#Deleted in new
chr11	1017698	1017918	chr11:1017698-1017918	478	+
#Deleted in new
chr11	72744084	72744304	chr11:72744084-72744304	403	+
#Deleted in new
chr11	114154280	114155388	chr11:114154280-114155388	1000	+
#Deleted in new
chr11	114159533	114160700	chr11:114159533-114160700	1000	+
#Deleted in new
chr11	114162326	114164768	chr11:114162326-114164768	1000	+
#Deleted in new
chr11	114171145	114171862	chr11:114171145-114171862	1000	+
#Deleted in new
chr11	114178525	114180215	chr11:114178525-114180215	1000	+
#Deleted in new
chr12	12785248	12786061	chr12:12785248-12786061	1000	+
#Deleted in new
chr12	15629084	15629679	chr12:15629084-15629679	1000	+
#Deleted in new
chr12	31731834	31732241	chr12:31731834-31732241	1000	+
#Deleted in new
chr13	40932732	40933409	chr13:40932732-40933409	1000	+
#Deleted in new
chr13	48783203	48783698	chr13:48783203-48783698	1000	+
#Deleted in new
chr13	110216609	110217263	chr13:110216609-110217263	1000	+
#Deleted in new
chr13	110520420	110521440	chr13:110520420-110521440	1000	+
#Deleted in new
chr14	75340832	75341436	chr14:75340832-75341436	1000	+
#Deleted in new
chr14_GL000225v1_random	26617	26837	chr14_GL000225v1_random:26617-26837	221	+
#Deleted in new
chr14_GL000225v1_random	47688	47908	chr14_GL000225v1_random:47688-47908	448	+
#Deleted in new
chr14_GL000225v1_random	50698	51031	chr14_GL000225v1_random:50698-51031	542	+
#Deleted in new
chr14_GL000225v1_random	71093	71313	chr14_GL000225v1_random:71093-71313	438	+
#Deleted in new
chr14_GL000225v1_random	85527	85807	chr14_GL000225v1_random:85527-85807	1000	+
#Deleted in new
chr14_GL000225v1_random	117674	117894	chr14_GL000225v1_random:117674-117894	569	+
#Deleted in new
chr14_GL000225v1_random	131625	131881	chr14_GL000225v1_random:131625-131881	1000	+
#Deleted in new
chr14_GL000225v1_random	133533	134049	chr14_GL000225v1_random:133533-134049	1000	+
#Deleted in new
chr15	29065812	29066032	chr15:29065812-29066032	398	+
#Partially deleted in new
chr15	99736250	99736510	chr15:99736250-99736510	480	+
#Deleted in new
chr16	5520012	5520232	chr16:5520012-5520232	393	+
#Deleted in new
chr16	30524596	30524906	chr16:30524596-30524906	1000	+
#Deleted in new
chr16	47031770	47031990	chr16:47031770-47031990	364	+
#Deleted in new
chr16	84832060	84833496	chr16:84832060-84833496	1000	+
#Deleted in new
chr17	12640361	12640581	chr17:12640361-12640581	383	+
#Deleted in new
chr17	26619902	26620158	chr17:26619902-26620158	1000	+
#Deleted in new
chr17	26937848	26938068	chr17:26937848-26938068	376	+
#Deleted in new
chr17	32871658	32872002	chr17:32871658-32872002	412	+
#Deleted in new
chr17	40542102	40543148	chr17:40542102-40543148	1000	+
#Deleted in new
chr17	55340571	55340791	chr17:55340571-55340791	405	+
#Deleted in new
chr17	82457900	82458972	chr17:82457900-82458972	1000	+
#Deleted in new
chr17_GL000205v2_random	42554	42977	chr17_GL000205v2_random:42554-42977	270	+
#Deleted in new
chr17_GL000205v2_random	70434	71069	chr17_GL000205v2_random:70434-71069	744	+
#Deleted in new
chr17_GL000205v2_random	71725	71945	chr17_GL000205v2_random:71725-71945	270	+
#Deleted in new
chr17_GL000205v2_random	75838	76355	chr17_GL000205v2_random:75838-76355	771	+
#Deleted in new
chr17_GL000205v2_random	80291	80575	chr17_GL000205v2_random:80291-80575	391	+
#Deleted in new
chr18	110322	110503	chr18:110322-110503	350	+
#Deleted in new
chr18	7204929	7205189	chr18:7204929-7205189	627	+
#Deleted in new
chr18	76471570	76471830	chr18:76471570-76471830	336	+
#Deleted in new
chr20	18137656	18138128	chr20:18137656-18138128	765	+
#Partially deleted in new
chr20	30629518	30629738	chr20:30629518-30629738	412	+
#Deleted in new
chr20	38830107	38830327	chr20:38830107-38830327	384	+
#Partially deleted in new
chr20	50395130	50395785	chr20:50395130-50395785	1000	+
#Deleted in new
chr20	50414996	50416168	chr20:50414996-50416168	1000	+
#Deleted in new
chr21	5357903	5358353	chr21:5357903-5358353	1000	+
#Deleted in new
chr21	9246872	9247092	chr21:9246872-9247092	335	+
#Partially deleted in new
chr21	9769799	9770019	chr21:9769799-9770019	413	+
#Partially deleted in new
chr21	10417445	10418021	chr21:10417445-10418021	1000	+
#Partially deleted in new
chr21	10437906	10438235	chr21:10437906-10438235	763	+
#Deleted in new
chr21	10450254	10450541	chr21:10450254-10450541	513	+
#Deleted in new
chr22	11029670	11029850	chr22:11029670-11029850	231	+
#Partially deleted in new
chr22	18730450	18730830	chr22:18730450-18730830	1000	+
#Deleted in new
chr22	43346474	43346734	chr22:43346474-43346734	568	+
#Deleted in new
chr22_KI270733v1_random	134962	135394	chr22_KI270733v1_random:134962-135394	1000	+
#Deleted in new
chr22_KI270733v1_random	135443	135943	chr22_KI270733v1_random:135443-135943	1000	+
#Deleted in new
chr22_KI270733v1_random	136015	136195	chr22_KI270733v1_random:136015-136195	297	+
#Deleted in new
chr22_KI270733v1_random	158611	158841	chr22_KI270733v1_random:158611-158841	1000	+
#Deleted in new
chr22_KI270733v1_random	162020	162263	chr22_KI270733v1_random:162020-162263	418	+
#Deleted in new
chr22_KI270733v1_random	165055	165335	chr22_KI270733v1_random:165055-165335	1000	+
#Deleted in new
chr22_KI270733v1_random	168703	169240	chr22_KI270733v1_random:168703-169240	1000	+
#Deleted in new
chr22_KI270733v1_random	172973	173385	chr22_KI270733v1_random:172973-173385	776	+
#Deleted in new
chr22_KI270733v1_random	175020	175284	chr22_KI270733v1_random:175020-175284	496	+
#Deleted in new
chr22_KI270736v1_random	156348	156568	chr22_KI270736v1_random:156348-156568	389	+
#Deleted in new
chr22_KI270736v1_random	166660	167381	chr22_KI270736v1_random:166660-167381	759	+
#Deleted in new
chr22_KI270736v1_random	172990	173210	chr22_KI270736v1_random:172990-173210	436	+
#Deleted in new
chrUn_GL000216v2	107	827	chrUn_GL000216v2:107-827	1000	+
#Deleted in new
chrUn_GL000216v2	146064	146284	chrUn_GL000216v2:146064-146284	557	+
#Deleted in new
chrUn_GL000216v2	158611	158791	chrUn_GL000216v2:158611-158791	842	+
#Deleted in new
chrUn_GL000216v2	167764	168000	chrUn_GL000216v2:167764-168000	1000	+
#Deleted in new
chrUn_GL000219v1	169261	169481	chrUn_GL000219v1:169261-169481	432	+
#Deleted in new
chrUn_GL000224v1	1338	1572	chrUn_GL000224v1:1338-1572	432	+
#Deleted in new
chrUn_GL000224v1	3423	4136	chrUn_GL000224v1:3423-4136	1000	+
#Deleted in new
chrUn_GL000224v1	20368	20588	chrUn_GL000224v1:20368-20588	317	+
#Partially deleted in new
chrUn_GL000224v1	33566	33786	chrUn_GL000224v1:33566-33786	396	+
#Deleted in new
chrUn_GL000224v1	36414	36634	chrUn_GL000224v1:36414-36634	387	+
#Deleted in new
chrUn_KI270330v1	1110	1290	chrUn_KI270330v1:1110-1290	201	+
#Deleted in new
chrUn_KI270438v1	22517	22777	chrUn_KI270438v1:22517-22777	548	+
#Deleted in new
chrUn_KI270442v1	75919	76169	chrUn_KI270442v1:75919-76169	487	+
#Deleted in new
chrUn_KI270442v1	80715	80980	chrUn_KI270442v1:80715-80980	458	+
#Partially deleted in new
chrUn_KI270742v1	3982	4162	chrUn_KI270742v1:3982-4162	258	+
#Partially deleted in new
chrUn_KI270746v1	28102	28473	chrUn_KI270746v1:28102-28473	712	+
#Deleted in new
chrUn_KI270751v1	149999	150259	chrUn_KI270751v1:149999-150259	509	+
#Deleted in new
chrX	15674488	15675937	chrX:15674488-15675937	974	+