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1175545 NA_peak_40 0 40 L1HS 4457 4497 - 40 0 0 NA_peak_41 0 40 40 chr10 117757629 117757669 + 40 NA_peak_42 0 40 40 chr11 1385692 1385732 + 40 NA_peak_43 0 40 40 chr11 13531073 13531113 + 40 chr11 13528749 13531792 L1PA2 2986 6028 + 1366314 NA_peak_43 0 40 L1PA2 5309 5349 + 40 0 0 NA_peak_44 0 40 40 chr11 47292396 47292436 + 40 NA_peak_45 0 40 40 chr11 49816049 49816089 + 40 chr11 49814706 49819280 L1HS 1458 6032 - 1175870 NA_peak_45 0 40 L1HS 4649 4689 - 40 0 0 NA_peak_46 0 40 40 chr11 57762269 57762309 + 40 chr11 57761634 57767659 L1PA2 0 6031 - 1365637 NA_peak_46 0 40 L1PA2 5356 5396 - 40 0 0 NA_peak_47 0 40 40 chr11 121731347 121731387 + 40 chr11 121729098 121732054 L1PA4 3187 6151 + 1382371 NA_peak_47 0 40 L1PA4 5445 5485 + 40 0 0 NA_peak_48 0 40 40 chr12 1964561 1964601 + 40 NA_peak_49 0 40 40 chr12 12871601 12871641 + 40 NA_peak_50 0 40 40 chr12 12888466 12888506 + 40 NA_peak_51 0 40 40 chr12 44502911 44502951 + 40 chr12 44502014 44508037 L1HS 0 6025 - 1175673 NA_peak_51 0 40 L1HS 5088 5128 - 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1370819 NA_peak_64 0 40 L1PA3short 4225 4265 - 40 0 0 NA_peak_65a 0 40 40 chr15 100997541 100997581 + 40 NA_peak_65b 0 40 40 chr15 100997655 100997695 + 40 NA_peak_66 0 40 40 chr16 1045272 1045312 + 40 NA_peak_67 0 40 40 chr16 33887682 33887722 + 40 NA_peak_68 0 40 40 chr16 46387013 46387053 + 40 NA_peak_69 0 40 40 chr16 46388345 46388385 + 40 NA_peak_70 0 40 40 chr16 46391331 46391371 + 40 NA_peak_71 0 40 40 chr16 46394782 46394822 + 40 NA_peak_72a 0 40 40 chr16 46406788 46406828 + 40 NA_peak_72b 0 40 40 chr16 46406957 46406997 + 40 NA_peak_73 0 40 40 chr16 46407701 46407741 + 40 NA_peak_74 0 40 40 chr16 46420346 46420386 + 40 NA_peak_75 0 40 40 chr16 46424066 46424106 + 40 NA_peak_76 0 40 40 chr16 46427018 46427058 + 40 NA_peak_77 0 40 40 chr16 46432738 46432778 + 40 NA_peak_78 0 40 40 chr16 46433954 46433994 + 40 NA_peak_79 0 40 40 chr17 17509989 17510029 + 40 NA_peak_80 0 40 40 chr17 25263156 25263196 + 40 NA_peak_81 0 40 40 chr17 25267814 25267854 + 40 NA_peak_82 0 40 40 chr17 44005914 44005954 + 40 chr17 44005932 44005958 MER5B 21 47 + 1723201 NA_peak_82 18 40 MER5B 21 43 + 22 18 0 NA_peak_83 0 40 40 chr17 62832593 62832633 + 40 NA_peak_84 0 40 40 chr17 72330736 72330776 + 40 NA_peak_85 0 40 40 chr17 75295075 75295115 + 40 NA_peak_86 0 40 40 chr17 79204355 79204395 + 40 NA_peak_87 0 40 40 chr18 12427764 12427804 + 40 NA_peak_88 0 40 40 chr18 18520264 18520304 + 40 NA_peak_89 0 40 40 chr18 44031221 44031261 + 40 NA_peak_90 0 40 40 chr19 521929 521969 + 40 NA_peak_91 0 40 40 chr19 1057577 1057617 + 40 NA_peak_92 0 40 40 chr19 2534534 2534574 + 40 NA_peak_93 0 40 40 chr19 10154141 10154181 + 40 NA_peak_94 0 40 40 chr19 13447781 13447821 + 40 NA_peak_95 0 40 40 chr19 15270133 15270173 + 40 NA_peak_96 0 40 40 chr19 16072157 16072197 + 40 NA_peak_97 0 40 40 chr19 16925498 16925538 + 40 NA_peak_98 0 40 40 chr19 17169225 17169265 + 40 NA_peak_99 0 40 40 chr19 17370385 17370425 + 40 NA_peak_100 0 40 40 chr19 29954830 29954870 + 40 chr19 29950197 29956095 L1PA2 1 5897 + 1366053 NA_peak_100 0 40 L1PA2 4630 4670 + 40 0 0 NA_peak_101 0 40 40 chr19 43248433 43248473 + 40 chr19 43248113 43254004 L1PA3long 246 6157 - 1370537 NA_peak_101 0 40 L1PA3long 5796 5836 - 40 0 0 NA_peak_102 0 40 40 chr2 1754389 1754429 + 40 NA_peak_103a 0 40 40 chr2 33141344 33141384 + 40 NA_peak_103b 0 40 40 chr2 33141480 33141520 + 40 NA_peak_104 0 40 40 chr2 33618979 33619019 + 40 chr2 33618355 33619918 L1PA5 4598 6144 - 1394979 NA_peak_104 0 40 L1PA5 5485 5525 - 40 0 0 NA_peak_105 0 40 40 chr2 37721433 37721473 + 40 chr2 37720907 37724147 L1PA2 2713 6032 - 1366676 NA_peak_105 0 40 L1PA2 5466 5506 - 40 0 0 NA_peak_106 0 40 40 chr2 38289926 38289966 + 40 chr2 38289762 38290540 L1PA4 5373 6151 - 1385767 NA_peak_106 0 40 L1PA4 5947 5987 - 40 0 0 NA_peak_107 0 40 40 chr2 43402458 43402498 + 40 NA_peak_108 0 40 40 chr2 48318302 48318342 + 40 NA_peak_109 0 40 40 chr2 57553479 57553519 + 40 chr2 57553068 57554506 L1PA5 4698 6136 + 1395135 NA_peak_109 0 40 L1PA5 5109 5149 + 40 0 0 NA_peak_110 0 40 40 chr2 87497779 87497819 + 40 chr2 87497111 87499878 L1PA4 3355 6152 - 1382496 NA_peak_110 0 40 L1PA4 5443 5483 - 40 0 0 NA_peak_111 0 40 40 chr2 89853215 89853255 + 40 NA_peak_112 0 40 40 chr2 89855550 89855590 + 40 NA_peak_113 0 40 40 chr2 89872135 89872175 + 40 NA_peak_114 0 40 40 chr2 89879908 89879948 + 40 NA_peak_115 0 40 40 chr2 92290932 92290972 + 40 NA_peak_116 0 40 40 chr2 92307318 92307358 + 40 NA_peak_117 0 40 40 chr2 92324369 92324409 + 40 NA_peak_118 0 40 40 chr2 130169169 130169209 + 40 chr2 130168626 130172951 L1HS 1708 6032 - 1175883 NA_peak_118 0 40 L1HS 5449 5489 - 40 0 0 NA_peak_119 0 40 40 chr2 137468771 137468811 + 40 chr2 137468227 137470253 L1PA4 4124 6151 - 1383121 NA_peak_119 0 40 L1PA4 5566 5606 - 40 0 0 NA_peak_120 0 40 40 chr2 138357126 138357166 + 40 chr2 138356905 138357279 L1PA2 5218 5592 + 1368337 NA_peak_120 0 40 L1PA2 5439 5479 + 40 0 0 NA_peak_121 0 40 40 chr2 141792340 141792380 + 40 chr2 141791874 141792920 L1PA3short 4965 6016 + 1374752 NA_peak_121 0 40 L1PA3short 5434 5474 + 40 0 0 NA_peak_122 0 40 40 chr2 143367020 143367060 + 40 chr2 143365350 143371377 L1PA2 4 6030 - 1365535 NA_peak_122 0 40 L1PA2 4320 4360 - 40 0 0 NA_peak_123 0 40 40 chr2 152544645 152544685 + 40 NA_peak_124 0 40 40 chr2 154078797 154078837 + 40 chr2 154078021 154079598 MER52A 0 1651 - 1670017 NA_peak_124 0 25 MER52A 757 782 - 21 0 15 NA_peak_125 0 40 40 chr2 183041450 183041490 + 40 chr2 183039479 183042221 L1PA6 3356 6159 - 1404448 NA_peak_125 0 40 L1PA6 4087 4127 - 40 0 0 NA_peak_126 0 40 40 chr2 201366386 201366426 + 40 chr2 201364176 201367020 L1PA3short 3191 6029 + 1372106 NA_peak_126 0 40 L1PA3short 5396 5436 + 40 0 0 NA_peak_127 0 40 40 chr2 241927709 241927749 + 40 NA_peak_128a 0 40 40 chr20 1431770 1431810 + 40 NA_peak_128b 0 40 40 chr20 1431891 1431931 + 40 NA_peak_129 0 40 40 chr20 3475971 3476011 + 40 NA_peak_130 0 40 40 chr20 19069606 19069646 + 40 chr20 19069396 19070111 L1PA2 4404 5119 + 1367540 NA_peak_130 0 40 L1PA2 4614 4654 + 40 0 0 NA_peak_131 0 40 40 chr20 32160568 32160608 + 40 NA_peak_132 0 40 40 chr20 46320558 46320598 + 40 NA_peak_133 0 40 40 chr21 10809193 10809233 + 40 NA_peak_134 0 40 40 chr21 10816674 10816714 + 40 NA_peak_135 0 40 40 chr21 10819558 10819598 + 40 NA_peak_136 0 40 40 chr21 46157992 46158032 + 40 NA_peak_137 0 40 40 chr21 47355734 47355774 + 40 NA_peak_138 0 40 40 chr22 42720087 42720127 + 40 NA_peak_139 0 40 40 chr3 2710325 2710365 + 40 chr3 2708279 2714419 L1PA5 6 6144 - 1392144 NA_peak_139 0 40 L1PA5 4055 4095 - 40 0 0 NA_peak_140 0 40 40 chr3 10429924 10429964 + 40 NA_peak_141 0 40 40 chr3 134670118 134670158 + 40 NA_peak_142 0 40 40 chr3 155227675 155227715 + 40 chr3 155224140 155229990 L1PA2 177 6032 - 1366077 NA_peak_142 0 40 L1PA2 2456 2496 - 40 0 0 NA_peak_143 0 40 40 chr3 175739356 175739396 + 40 chr3 175733911 175739972 L1PA3short 3 6033 + 1371067 NA_peak_143 0 40 L1PA3short 5448 5488 + 40 0 0 NA_peak_144 0 40 40 chr3 180143318 180143358 + 40 chr3 180142704 180143783 L1PA3short 4945 6025 - 1374618 NA_peak_144 0 40 L1PA3short 5370 5410 - 40 0 0 NA_peak_145 0 40 40 chr3 185349283 185349323 + 40 NA_peak_146 0 40 40 chr3 196625693 196625733 + 40 NA_peak_147 0 40 40 chr4 49094398 49094438 + 40 NA_peak_148 0 40 40 chr4 49099708 49099748 + 40 NA_peak_149a 0 40 40 chr4 49100607 49100647 + 40 NA_peak_149b 0 40 40 chr4 49100796 49100836 + 40 NA_peak_150 0 40 40 chr4 49111951 49111991 + 40 NA_peak_151 0 40 40 chr4 49119720 49119760 + 40 NA_peak_152 0 40 40 chr4 49120956 49120996 + 40 NA_peak_153 0 40 40 chr4 49128946 49128986 + 40 NA_peak_154 0 40 40 chr4 49136756 49136796 + 40 NA_peak_155 0 40 40 chr4 49152494 49152534 + 40 NA_peak_156 0 40 40 chr4 49156503 49156543 + 40 NA_peak_157 0 40 40 chr4 49636279 49636319 + 40 NA_peak_158 0 40 40 chr4 49648312 49648352 + 40 NA_peak_159 0 40 40 chr4 49653437 49653477 + 40 NA_peak_160 0 40 40 chr4 49659609 49659649 + 40 NA_peak_161 0 40 40 chr4 53407228 53407268 + 40 chr4 53404637 53410664 L1HS 2 6032 + 1175772 NA_peak_161 0 40 L1HS 2593 2633 + 40 0 0 NA_peak_162 0 40 40 chr4 56944048 56944088 + 40 NA_peak_163 0 40 40 chr4 76591563 76591603 + 40 NA_peak_164 0 40 40 chr4 81916167 81916207 + 40 chr4 81915624 81917555 L1PA3short 4106 6029 - 1372926 NA_peak_164 0 40 L1PA3short 5454 5494 - 40 0 0 NA_peak_165 0 40 40 chr4 97323679 97323719 + 40 chr4 97323543 97324618 L1PA3short 3846 4921 + 1374617 NA_peak_165 0 40 L1PA3short 3981 4021 + 40 0 0 NA_peak_166 0 40 40 chr4 99246745 99246785 + 40 chr4 99241649 99247082 L1PA2 67 6030 + 1366120 NA_peak_166 0 40 L1PA2 5691 5731 + 40 0 0 NA_peak_167 0 40 40 chr4 103874147 103874187 + 40 chr4 103873124 103875607 L1HS 3550 6032 - 1176011 NA_peak_167 0 40 L1HS 4970 5010 - 40 0 0 NA_peak_168 0 40 40 chr4 133243203 133243243 + 40 chr4 133242619 133244174 L1PA4 4582 6143 + 1383780 NA_peak_168 0 40 L1PA4 5176 5216 + 40 0 0 NA_peak_169 0 40 40 chr4 143575126 143575166 + 40 chr4 143569352 143575531 L1PA6 0 6162 + 1403365 NA_peak_169 0 40 L1PA6 5758 5798 + 40 0 0 NA_peak_170 0 40 40 chr4 162447952 162447992 + 40 chr4 162447656 162448426 L1PA3short 4198 4973 - 1375792 NA_peak_170 0 40 L1PA3short 4637 4677 - 40 0 0 NA_peak_171 0 40 40 chr4 183700837 183700877 + 40 chr4 183700210 183706233 L1PA2 0 6031 - 1365693 NA_peak_171 0 40 L1PA2 5365 5405 - 40 0 0 NA_peak_172 0 40 40 chr4 190156285 190156325 + 40 NA_peak_173 0 40 40 chr4 190988795 190988835 + 40 NA_peak_174 0 40 40 chr5 10089 10129 + 40 NA_peak_175 0 40 40 chr5 10750 10790 + 40 NA_peak_176 0 40 40 chr5 1262701 1262741 + 40 NA_peak_177 0 40 40 chr5 71055613 71055653 + 40 chr5 71055026 71056407 L1PA4 4769 6151 - 1384072 NA_peak_177 0 40 L1PA4 5524 5564 - 40 0 0 NA_peak_178 0 40 40 chr5 71148592 71148632 + 40 chr5 71146942 71150001 L1PA2 2972 6030 + 1366313 NA_peak_178 0 40 L1PA2 4621 4661 + 40 0 0 NA_peak_179 0 40 40 chr5 100357535 100357575 + 40 chr5 100355692 100358178 L1PA3short 3547 6031 + 1372320 NA_peak_179 0 40 L1PA3short 5390 5430 + 40 0 0 NA_peak_180 0 40 40 chr5 157610263 157610303 + 40 chr5 157610166 157614750 L1PA3short 1447 6032 + 1371610 NA_peak_180 0 40 L1PA3short 1544 1584 + 40 0 0 NA_peak_181 0 40 40 chr6 944681 944721 + 40 NA_peak_182 0 40 40 chr6 27994055 27994095 + 40 chr6 27988538 27994690 L1PA3long 1 6157 + 1369891 NA_peak_182 0 40 L1PA3long 5522 5562 + 40 0 0 NA_peak_183 0 40 40 chr6 62100956 62100996 + 40 chr6 62100395 62101967 L1PA3short 4450 6025 + 1373455 NA_peak_183 0 40 L1PA3short 5011 5051 + 40 0 0 NA_peak_184 0 40 40 chr6 85323830 85323870 + 40 chr6 85318154 85324181 L1HS 0 6032 + 1175766 NA_peak_184 0 40 L1HS 5681 5721 + 40 0 0 NA_peak_185 0 40 40 chr6 100807957 100807997 + 40 chr6 100802579 100808601 L1PA2 0 6031 + 1365619 NA_peak_185 0 40 L1PA2 5387 5427 + 40 0 0 NA_peak_186 0 40 40 chr6 110400869 110400909 + 40 NA_peak_187 0 40 40 chr6 125641791 125641831 + 40 chr6 125640093 125643222 L1HS 2903 6032 + 1175953 NA_peak_187 0 40 L1HS 4601 4641 + 40 0 0 NA_peak_188 0 40 40 chr7 61968895 61968935 + 40 NA_peak_189 0 40 40 chr7 64954440 64954480 + 40 NA_peak_190 0 40 40 chr7 98384282 98384322 + 40 NA_peak_191 0 40 40 chr7 98445901 98445941 + 40 NA_peak_192 0 40 40 chr7 99304894 99304934 + 40 NA_peak_193 0 40 40 chr7 100550815 100550855 + 40 NA_peak_194 0 40 40 chr7 158387935 158387975 + 40 chr7 158387838 158387979 HAL1-2a_MD 20 146 - 1158193 NA_peak_194 0 40 HAL1-2a_MD 24 73 - 36 0 0 NA_peak_195 0 40 40 chr8 33557726 33557766 + 40 chr8 33555719 33560588 L1PA4 1282 6152 - 1381732 NA_peak_195 0 40 L1PA4 4108 4148 - 40 0 0 NA_peak_196 0 40 40 chr8 41865055 41865095 + 40 NA_peak_197 0 40 40 chr8 43092909 43092949 + 40 NA_peak_198 0 40 40 chr8 43093111 43093151 + 40 NA_peak_199 0 40 40 chr8 43093850 43093890 + 40 NA_peak_200 0 40 40 chr8 43094805 43094845 + 40 NA_peak_201 0 40 40 chr8 43095191 43095231 + 40 NA_peak_202a 0 40 40 chr8 43095907 43095947 + 40 NA_peak_202b 0 40 40 chr8 43096106 43096146 + 40 NA_peak_203a 0 40 40 chr8 43096885 43096925 + 40 NA_peak_203b 0 40 40 chr8 43097003 43097043 + 40 NA_peak_204 0 40 40 chr8 46841775 46841815 + 40 NA_peak_205 0 40 40 chr8 81566559 81566599 + 40 chr8 81561426 81567560 L1PA4 13 6131 + 1380449 NA_peak_205 0 40 L1PA4 5124 5164 + 40 0 0 NA_peak_206 0 40 40 chr8 85378112 85378152 + 40 chr8 85376377 85382401 L1PA2 0 6030 - 1365524 NA_peak_206 0 40 L1PA2 4254 4294 - 40 0 0 NA_peak_207 0 40 40 chr8 131145812 131145852 + 40 chr8 131145620 131145949 AluYb8 0 308 + 1084150 NA_peak_207 0 40 AluYb8 192 232 + 40 0 0 NA_peak_208 0 40 40 chr9 9838416 9838456 + 40 chr9 9837770 9839183 L1PA3short 4614 6030 - 1373758 NA_peak_208 0 40 L1PA3short 5344 5384 - 40 0 0 NA_peak_209 0 40 40 chr9 23014803 23014843 + 40 chr9 23014313 23015423 L1PA4 5026 6152 + 1384681 NA_peak_209 0 40 L1PA4 5532 5572 + 40 0 0 NA_peak_210a 0 40 40 chr9 72653114 72653154 + 40 NA_peak_210b 0 40 40 chr9 72653283 72653323 + 40 NA_peak_211 0 40 40 chr9 111268745 111268785 + 40 chr9 111263371 111269395 L1PA2 0 6028 + 1365441 NA_peak_211 0 40 L1PA2 5378 5418 + 40 0 0 NA_peak_212 0 40 40 chr9 117525052 117525092 + 40 NA_peak_213 0 40 40 chr9_gl000199_random 57122 57162 + 40 NA_peak_214 0 40 40 chrM 187 227 + 40 NA_peak_215a 0 40 40 chrM 16153 16193 + 40 NA_peak_215b 0 40 40 chrM 16237 16277 + 40 NA_peak_216 0 40 40 chrUn_gl000214 64371 64411 + 40 NA_peak_217 0 40 40 chrUn_gl000216 10575 10615 + 40 NA_peak_218 0 40 40 chrUn_gl000216 20369 20409 + 40 NA_peak_219 0 40 40 chrUn_gl000216 53933 53973 + 40 NA_peak_220 0 40 40 chrUn_gl000216 75859 75899 + 40 NA_peak_221 0 40 40 chrX 44141842 44141882 + 40 chrX 44141567 44141861 AluSx 0 282 + 576812 NA_peak_221 0 19 AluSx 263 282 + 19 0 21 NA_peak_222 0 40 40 chrX 72821048 72821088 + 40 chrX 72820625 72822084 L1PA2 2096 3547 + 1366791 NA_peak_222 0 40 L1PA2 2517 2557 + 40 0 0 NA_peak_223 0 40 40 chrX 147930911 147930951 + 40 NA_peak_224 0 40 40 chrX 149234690 149234730 + 40 chrX 149234362 149239855 L1PA4 632 6143 - 1381574 NA_peak_224 0 40 L1PA4 5775 5815 - 40 0 0 NA_peak_225 0 40 40 chrX 149300616 149300656 + 40 chrX 149299638 149301335 L1PA2 4335 6032 - 1366639 NA_peak_225 0 40 L1PA2 5014 5054 - 40 0 0 NA_peak_226 0 40 40 chrX 153640490 153640530 + 40 NA_peak_227 0 40 40 chrX 155260079 155260119 + 40 NA_peak_228 0 40 40 chrY 13141069 13141109 + 40 NA_peak_229 0 40 40 chrY 13448692 13448732 + 40 NA_peak_230 0 40 40 chrY 13453337 13453377 + 40 NA_peak_231 0 40 40 chrY 13458686 13458726 + 40 NA_peak_232a 0 40 40 chrY 13459138 13459178 + 40 NA_peak_232b 0 40 40 chrY 13459289 13459329 + 40 NA_peak_233 0 40 40 chrY 13669539 13669579 + 40 NA_peak_234 0 40 40 chrY 13680951 13680991 + 40 NA_peak_235 0 40 40 chrY 13801098 13801138 + 40 NA_peak_236 0 40 40 chrY 13804786 13804826 + 40 NA_peak_237 0 40 40 chrY 13811140 13811180 + 40 NA_peak_238 0 40 40 chrY 13842696 13842736 + 40 NA_peak_239 0 40 40 chrY 13851661 13851701 + 40 NA_peak_240 0 40 40 chrY 13859944 13859984 + 40 NA_peak_241 0 40 40 chrY 13861506 13861546 + 40 NA_peak_242 0 40 40 chrY 23121126 23121166 + 40 chrY 23120577 23121434 L1HS 5175 6032 - 1176398 NA_peak_242 0 40 L1HS 5443 5483 - 40 0 0 NA_peak_243 0 40 40 chrY 28784402 28784442 + 40 NA_peak_244 0 40 40 chrY 58979428 58979468 + 40 NA_peak_245a 0 40 40 chrY 58980551 58980591 + 40 NA_peak_245b 0 40 40 chrY 58980705 58980745 + 40 NA_peak_246 0 40 40 chrY 59363079 59363119 + 40