track hubCentral
compositeTrack on
shortLabel t2t-apes-xy-prog
longLabel t2t-apes-xy-prog
group comphub
subGroup1 view Track_Type Snake=Alignments  
subGroup2 orgs Organisms Anc1=Anc1 Anc2=Anc2 Anc3=Anc3 Gorilla_gorilla=Gorilla_gorilla Anc5=Anc5 Anc6=Anc6 Pan_troglodytes=Pan_troglodytes Pan_paniscus=Pan_paniscus hs1=hs1 Anc4=Anc4 Pongo_abelii=Pongo_abelii Pongo_pygmaeus=Pongo_pygmaeus Symphalangus_syndactylus=Symphalangus_syndactylus
dragAndDrop subTracks
#allButtonPair on
dimensions dimensionX=view dimensionY=orgs
noInherit on
priority 0
centerLabelsDense on
visibility full
html ../documentation/hubCentral
type bigBed 3

	track hubCentralAlignments
	shortLabel Alignments
	view Alignments
	visibility full
	subTrack hubCentral

		track snakeAnc1
		longLabel Anc1
		shortLabel Anc1
		otherSpecies Anc1
		visibility hide
		parent hubCentralAlignments off
		priority 2
		bigDataUrl ../t2t-apes-xy-anc1.hal
		type halSnake
		group snake
		subGroups view=Snake orgs=Anc1

		track snakeAnc2
		longLabel Anc2
		shortLabel Anc2
		otherSpecies Anc2
		visibility hide
		parent hubCentralAlignments off
		priority 3
		bigDataUrl ../t2t-apes-xy-anc1.hal
		type halSnake
		group snake
		subGroups view=Snake orgs=Anc2

		track snakeAnc3
		longLabel Anc3
		shortLabel Anc3
		otherSpecies Anc3
		visibility hide
		parent hubCentralAlignments off
		priority 4
		bigDataUrl ../t2t-apes-xy-anc1.hal
		type halSnake
		group snake
		subGroups view=Snake orgs=Anc3

		track snakeGorilla_gorilla
		longLabel Gorilla_gorilla
		shortLabel Gorilla_gorilla
		otherSpecies Gorilla_gorilla
		visibility full
		parent hubCentralAlignments
		priority 5
		bigDataUrl ../t2t-apes-xy-anc1.hal
		type halSnake
		group snake
		subGroups view=Snake orgs=Gorilla_gorilla

		track snakeAnc5
		longLabel Anc5
		shortLabel Anc5
		otherSpecies Anc5
		visibility hide
		parent hubCentralAlignments off
		priority 6
		bigDataUrl ../t2t-apes-xy-anc1.hal
		type halSnake
		group snake
		subGroups view=Snake orgs=Anc5

		track snakeAnc6
		longLabel Anc6
		shortLabel Anc6
		otherSpecies Anc6
		visibility hide
		parent hubCentralAlignments off
		priority 7
		bigDataUrl ../t2t-apes-xy-anc1.hal
		type halSnake
		group snake
		subGroups view=Snake orgs=Anc6

		track snakePan_troglodytes
		longLabel Pan_troglodytes
		shortLabel Pan_troglodytes
		otherSpecies Pan_troglodytes
		visibility full
		parent hubCentralAlignments
		priority 8
		bigDataUrl ../t2t-apes-xy-anc1.hal
		type halSnake
		group snake
		subGroups view=Snake orgs=Pan_troglodytes

		track snakePan_paniscus
		longLabel Pan_paniscus
		shortLabel Pan_paniscus
		otherSpecies Pan_paniscus
		visibility hide
		parent hubCentralAlignments off
		priority 9
		bigDataUrl ../t2t-apes-xy-anc1.hal
		type halSnake
		group snake
		subGroups view=Snake orgs=Pan_paniscus

		track snakehs1
		longLabel hs1
		shortLabel hs1
		otherSpecies hs1
		visibility hide
		parent hubCentralAlignments off
		priority 10
		bigDataUrl ../t2t-apes-xy-anc1.hal
		type halSnake
		group snake
		subGroups view=Snake orgs=hs1

		track snakeAnc4
		longLabel Anc4
		shortLabel Anc4
		otherSpecies Anc4
		visibility full
		parent hubCentralAlignments
		priority 11
		bigDataUrl ../t2t-apes-xy-anc1.hal
		type halSnake
		group snake
		subGroups view=Snake orgs=Anc4

		track snakePongo_pygmaeus
		longLabel Pongo_pygmaeus
		shortLabel Pongo_pygmaeus
		otherSpecies Pongo_pygmaeus
		visibility full
		parent hubCentralAlignments
		priority 13
		bigDataUrl ../t2t-apes-xy-anc1.hal
		type halSnake
		group snake
		subGroups view=Snake orgs=Pongo_pygmaeus

		track snakeSymphalangus_syndactylus
		longLabel Symphalangus_syndactylus
		shortLabel Symphalangus_syndactylus
		otherSpecies Symphalangus_syndactylus
		visibility full
		parent hubCentralAlignments
		priority 14
		bigDataUrl ../t2t-apes-xy-anc1.hal
		type halSnake
		group snake
		subGroups view=Snake orgs=Symphalangus_syndactylus