track hubCentral
compositeTrack on
shortLabel t2t-apes-xy-pan
longLabel t2t-apes-xy-pan
group comphub
subGroup1 view Track_Type Snake=Alignments  
subGroup2 orgs Organisms Anc0=Anc0 hs1=hs1 Pan_troglodytes=Pan_troglodytes Pan_paniscus=Pan_paniscus Gorilla_gorilla=Gorilla_gorilla Pongo_abelii=Pongo_abelii Pongo_pygmaeus=Pongo_pygmaeus Symphalangus_syndactylus=Symphalangus_syndactylus _MINIGRAPH_=_MINIGRAPH_
dragAndDrop subTracks
#allButtonPair on
dimensions dimensionX=view dimensionY=orgs
noInherit on
priority 0
centerLabelsDense on
visibility full
html ../documentation/hubCentral
type bigBed 3

	track hubCentralAlignments
	shortLabel Alignments
	view Alignments
	visibility full
	subTrack hubCentral

		track snakeAnc0
		longLabel Anc0
		shortLabel Anc0
		otherSpecies Anc0
		visibility full
		parent hubCentralAlignments
		priority 2
		bigDataUrl ../t2t-apes-xy-pan-dec7.hal
		type halSnake
		group snake
		subGroups view=Snake orgs=Anc0

		track snakePan_troglodytes
		longLabel Pan_troglodytes
		shortLabel Pan_troglodytes
		otherSpecies Pan_troglodytes
		visibility full
		parent hubCentralAlignments
		priority 4
		bigDataUrl ../t2t-apes-xy-pan-dec7.hal
		type halSnake
		group snake
		subGroups view=Snake orgs=Pan_troglodytes

		track snakePan_paniscus
		longLabel Pan_paniscus
		shortLabel Pan_paniscus
		otherSpecies Pan_paniscus
		visibility full
		parent hubCentralAlignments
		priority 5
		bigDataUrl ../t2t-apes-xy-pan-dec7.hal
		type halSnake
		group snake
		subGroups view=Snake orgs=Pan_paniscus

		track snakeGorilla_gorilla
		longLabel Gorilla_gorilla
		shortLabel Gorilla_gorilla
		otherSpecies Gorilla_gorilla
		visibility hide
		parent hubCentralAlignments off
		priority 6
		bigDataUrl ../t2t-apes-xy-pan-dec7.hal
		type halSnake
		group snake
		subGroups view=Snake orgs=Gorilla_gorilla

		track snakePongo_abelii
		longLabel Pongo_abelii
		shortLabel Pongo_abelii
		otherSpecies Pongo_abelii
		visibility hide
		parent hubCentralAlignments off
		priority 7
		bigDataUrl ../t2t-apes-xy-pan-dec7.hal
		type halSnake
		group snake
		subGroups view=Snake orgs=Pongo_abelii

		track snakePongo_pygmaeus
		longLabel Pongo_pygmaeus
		shortLabel Pongo_pygmaeus
		otherSpecies Pongo_pygmaeus
		visibility hide
		parent hubCentralAlignments off
		priority 8
		bigDataUrl ../t2t-apes-xy-pan-dec7.hal
		type halSnake
		group snake
		subGroups view=Snake orgs=Pongo_pygmaeus

		track snakeSymphalangus_syndactylus
		longLabel Symphalangus_syndactylus
		shortLabel Symphalangus_syndactylus
		otherSpecies Symphalangus_syndactylus
		visibility hide
		parent hubCentralAlignments off
		priority 9
		bigDataUrl ../t2t-apes-xy-pan-dec7.hal
		type halSnake
		group snake
		subGroups view=Snake orgs=Symphalangus_syndactylus

		track snake_MINIGRAPH_
		longLabel _MINIGRAPH_
		shortLabel _MINIGRAPH_
		otherSpecies _MINIGRAPH_
		visibility hide
		parent hubCentralAlignments off
		priority 10
		bigDataUrl ../t2t-apes-xy-pan-dec7.hal
		type halSnake
		group snake
		subGroups view=Snake orgs=_MINIGRAPH_

track cactusMaf
shortLabel Minigraph-Cactus MAF
longLabel Minigraph-Cactus MAF
priority 9
visibility full
type bigMaf
bigDataUrl t2t-apes-xy-pan.bigmaf.bb
summary t2t-apes-xy-pan.bigmafsummary.bb
html ../documentation/hubCentral.html
speciesOrder Pan_troglodytes Pan_paniscus Gorilla_gorilla Pongo_abelii Pongo_pygmaeus Symphalangus_syndactylus